Metagenome / Metatranscriptome Family F084524

Basic Information
Family ID	F084524
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	70 residues
Representative Sequence	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSFTASAKFEPKGDLKTA
Number of Associated Samples	92
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	13.39 %
% of genes near scaffold ends (potentially truncated)	28.57 %
% of genes from short scaffolds (< 2000 bps)	75.89 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (83.036 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost (16.964 % of family members)
Environment Ontology (ENVO)	Unclassified (25.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.893 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 46.48% Coil/Unstructured: 53.52%
Feature Viewer

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Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF13451	zf-trcl	41.96
PF04993	TfoX_N	14.29
PF05726	Pirin_C	8.04
PF13191	AAA_16	2.68
PF01432	Peptidase_M3	2.68
PF00326	Peptidase_S9	2.68
PF13738	Pyr_redox_3	1.79
PF09594	GT87	1.79
PF00072	Response_reg	0.89
PF13564	DoxX_2	0.89
PF00583	Acetyltransf_1	0.89
PF02579	Nitro_FeMo-Co	0.89
PF05977	MFS_3	0.89
PF02771	Acyl-CoA_dh_N	0.89
PF08818	DUF1801	0.89
PF05050	Methyltransf_21	0.89
PF00271	Helicase_C	0.89
PF01717	Meth_synt_2	0.89
PF03972	MmgE_PrpD	0.89
PF01988	VIT1	0.89
PF13596	PAS_10	0.89
PF12867	DinB_2	0.89
PF00587	tRNA-synt_2b	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG3070	Transcriptional regulator of competence genes, TfoX/Sxy family	Transcription [K]	14.29
COG1741	Redox-sensitive bicupin YhaK, pirin superfamily	General function prediction only [R]	8.04
COG0339	Zn-dependent oligopeptidase, M3 family	Posttranslational modification, protein turnover, chaperones [O]	2.68
COG1164	Oligoendopeptidase F	Amino acid transport and metabolism [E]	2.68
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	0.89
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	0.89
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	0.89
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.89
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	0.89
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.89
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.89
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.89
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.89

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.04 %
Unclassified	root	N/A	16.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.04 %
Unclassified	root	N/A	16.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.04 %
Unclassified	root	N/A	16.96 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	42.86 %
Unclassified	root	N/A	16.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.79 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	40.18 %
Unclassified	root	N/A	16.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	37.50 %
Unclassified	root	N/A	16.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	37.50 %
Unclassified	root	N/A	16.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908032\|Perma_A_C_ConsensusfromContig57254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	613	Open in IMG/M
2170459003\|FZ032L002GCQE4	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300000878\|AL9A1W_1272630	Not Available	603	Open in IMG/M
3300000880\|AL20A1W_1028857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	723	Open in IMG/M
3300000880\|AL20A1W_1115302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	535	Open in IMG/M
3300000880\|AL20A1W_1127915	All Organisms → cellular organisms → Bacteria	1368	Open in IMG/M
3300000887\|AL16A1W_10016597	All Organisms → cellular organisms → Bacteria	2722	Open in IMG/M
3300001380\|JGI1356J14229_10050283	All Organisms → cellular organisms → Bacteria	2107	Open in IMG/M
3300001380\|JGI1356J14229_10057327	All Organisms → cellular organisms → Bacteria	1896	Open in IMG/M
3300001535\|A3PFW1_10079823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	569	Open in IMG/M
3300001536\|A1565W1_10100850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	624	Open in IMG/M
3300001537\|A2065W1_10506076	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2741	Open in IMG/M
3300001537\|A2065W1_11497753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	555	Open in IMG/M
3300002025\|smpD1_1048835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	501	Open in IMG/M
3300002917\|JGI25616J43925_10080417	All Organisms → cellular organisms → Bacteria	1365	Open in IMG/M
3300004114\|Ga0062593_100313323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1346	Open in IMG/M
3300005172\|Ga0066683_10241652	Not Available	1119	Open in IMG/M
3300005174\|Ga0066680_10369640	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300005175\|Ga0066673_10478240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	734	Open in IMG/M
3300005176\|Ga0066679_10427173	Not Available	868	Open in IMG/M
3300005176\|Ga0066679_10810432	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300005181\|Ga0066678_10992655	Not Available	545	Open in IMG/M
3300005434\|Ga0070709_10154813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1588	Open in IMG/M
3300005434\|Ga0070709_10184417	All Organisms → cellular organisms → Bacteria	1468	Open in IMG/M
3300005445\|Ga0070708_100002459	All Organisms → cellular organisms → Bacteria	14344	Open in IMG/M
3300005445\|Ga0070708_100017008	All Organisms → cellular organisms → Bacteria	6053	Open in IMG/M
3300005445\|Ga0070708_100116936	All Organisms → cellular organisms → Bacteria	2455	Open in IMG/M
3300005445\|Ga0070708_101973400	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300005447\|Ga0066689_10682012	Not Available	644	Open in IMG/M
3300005454\|Ga0066687_10870179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	537	Open in IMG/M
3300005467\|Ga0070706_100006390	All Organisms → cellular organisms → Bacteria	11136	Open in IMG/M
3300005467\|Ga0070706_101479743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	621	Open in IMG/M
3300005468\|Ga0070707_100728991	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300005471\|Ga0070698_100093388	All Organisms → cellular organisms → Bacteria	2988	Open in IMG/M
3300005537\|Ga0070730_10009549	All Organisms → cellular organisms → Bacteria	8037	Open in IMG/M
3300005539\|Ga0068853_100713534	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300005568\|Ga0066703_10763392	Not Available	554	Open in IMG/M
3300005575\|Ga0066702_10373222	All Organisms → cellular organisms → Bacteria → Terrabacteria group	868	Open in IMG/M
3300005598\|Ga0066706_10257698	All Organisms → cellular organisms → Bacteria	1360	Open in IMG/M
3300005614\|Ga0068856_100894878	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300006032\|Ga0066696_10018231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3550	Open in IMG/M
3300006032\|Ga0066696_10542382	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300006046\|Ga0066652_101300728	Not Available	686	Open in IMG/M
3300006175\|Ga0070712_101530504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	583	Open in IMG/M
3300006797\|Ga0066659_10589704	Not Available	901	Open in IMG/M
3300006854\|Ga0075425_100074608	All Organisms → cellular organisms → Bacteria → Proteobacteria	3825	Open in IMG/M
3300007982\|Ga0102924_1017850	All Organisms → cellular organisms → Bacteria	5352	Open in IMG/M
3300009012\|Ga0066710_100132633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3423	Open in IMG/M
3300009089\|Ga0099828_10268392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1532	Open in IMG/M
3300009090\|Ga0099827_11892351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	520	Open in IMG/M
3300009137\|Ga0066709_101589715	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300009137\|Ga0066709_102997930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	620	Open in IMG/M
3300009777\|Ga0105164_10017708	All Organisms → cellular organisms → Bacteria	4038	Open in IMG/M
3300009777\|Ga0105164_10087857	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1627	Open in IMG/M
3300010301\|Ga0134070_10157209	Not Available	818	Open in IMG/M
3300011971\|Ga0120175_1018858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	857	Open in IMG/M
3300011987\|Ga0120164_1010425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1813	Open in IMG/M
3300011991\|Ga0120153_1000565	All Organisms → cellular organisms → Bacteria	19965	Open in IMG/M
3300011991\|Ga0120153_1004294	All Organisms → cellular organisms → Bacteria	4783	Open in IMG/M
3300011996\|Ga0120156_1020536	Not Available	1266	Open in IMG/M
3300011998\|Ga0120114_1003825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3906	Open in IMG/M
3300012001\|Ga0120167_1019312	All Organisms → cellular organisms → Bacteria	1741	Open in IMG/M
3300012096\|Ga0137389_10870643	Not Available	773	Open in IMG/M
3300012189\|Ga0137388_10991364	Not Available	775	Open in IMG/M
3300012204\|Ga0137374_10193812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1758	Open in IMG/M
3300012206\|Ga0137380_11582311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	540	Open in IMG/M
3300012209\|Ga0137379_10541904	Not Available	1071	Open in IMG/M
3300012209\|Ga0137379_11318084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	627	Open in IMG/M
3300012210\|Ga0137378_10411194	All Organisms → cellular organisms → Bacteria	1255	Open in IMG/M
3300012224\|Ga0134028_1209206	Not Available	612	Open in IMG/M
3300012350\|Ga0137372_10049721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3712	Open in IMG/M
3300012360\|Ga0137375_10991728	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300012377\|Ga0134029_1045224	Not Available	681	Open in IMG/M
3300012405\|Ga0134041_1024014	Not Available	606	Open in IMG/M
3300013501\|Ga0120154_1046366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1045	Open in IMG/M
3300013764\|Ga0120111_1053167	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300013772\|Ga0120158_10368928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	669	Open in IMG/M
3300015079\|Ga0167657_1006255	All Organisms → cellular organisms → Bacteria	1745	Open in IMG/M
3300015084\|Ga0167654_1057086	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300015086\|Ga0167655_1039506	Not Available	740	Open in IMG/M
3300015171\|Ga0167648_1086671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	658	Open in IMG/M
3300018468\|Ga0066662_11775713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	645	Open in IMG/M
3300018482\|Ga0066669_10174819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1612	Open in IMG/M
3300019877\|Ga0193722_1029190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1428	Open in IMG/M
3300021046\|Ga0215015_10571914	All Organisms → cellular organisms → Bacteria	1282	Open in IMG/M
3300021344\|Ga0193719_10044002	All Organisms → cellular organisms → Bacteria	1934	Open in IMG/M
3300025173\|Ga0209824_10024167	All Organisms → cellular organisms → Bacteria	2470	Open in IMG/M
3300025173\|Ga0209824_10063811	All Organisms → cellular organisms → Bacteria	1396	Open in IMG/M
3300025910\|Ga0207684_10000029	All Organisms → cellular organisms → Bacteria	305483	Open in IMG/M
3300025910\|Ga0207684_10024511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5142	Open in IMG/M
3300025910\|Ga0207684_10584118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	955	Open in IMG/M
3300025911\|Ga0207654_10756821	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300025922\|Ga0207646_11365458	Not Available	617	Open in IMG/M
3300025931\|Ga0207644_10853290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	763	Open in IMG/M
3300026322\|Ga0209687_1309781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	503	Open in IMG/M
3300026328\|Ga0209802_1321960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	511	Open in IMG/M
3300026552\|Ga0209577_10357204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1073	Open in IMG/M
3300027815\|Ga0209726_10018255	All Organisms → cellular organisms → Bacteria	6166	Open in IMG/M
3300027819\|Ga0209514_10003104	All Organisms → cellular organisms → Bacteria	24363	Open in IMG/M
3300027819\|Ga0209514_10021887	All Organisms → cellular organisms → Bacteria	5617	Open in IMG/M
3300027857\|Ga0209166_10042980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2677	Open in IMG/M
3300028006\|Ga0247717_1005689	All Organisms → cellular organisms → Bacteria	2206	Open in IMG/M
3300028707\|Ga0307291_1134060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	627	Open in IMG/M
3300028828\|Ga0307312_11203218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	501	Open in IMG/M
3300030975\|Ga0099845_1596737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	684	Open in IMG/M
3300030997\|Ga0073997_12257873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	743	Open in IMG/M
3300030998\|Ga0073996_10082796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	643	Open in IMG/M
3300030998\|Ga0073996_10088623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	661	Open in IMG/M
3300031047\|Ga0073995_10010497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	753	Open in IMG/M
3300032163\|Ga0315281_10020794	All Organisms → cellular organisms → Bacteria	8620	Open in IMG/M
3300032180\|Ga0307471_101542529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	822	Open in IMG/M
3300032421\|Ga0310812_10210817	Not Available	845	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.54%
Host-Associated	Host-Associated	4.46%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.71%
Aquatic	Environmental → Aquatic	9.82%
Plants	Host-Associated → Plants	4.46%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.71%
Freshwater	Environmental → Aquatic → Freshwater	8.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.68%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.79%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.43%
Loam	Environmental → Terrestrial → Soil → Loam	14.29%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	4.46%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	3.57%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.79%
Lake	Environmental → Aquatic → Freshwater → Lake	0.89%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	21.43%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	18.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.39%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	4.46%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.46%
Unchlorinated	Environmental → Aquatic → Freshwater → Drinking Water → Unchlorinated	3.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.79%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.89%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.89%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.89%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	16.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	15.18%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	13.39%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.25%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.36%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	4.46%
Wastewater	Environmental → Aquatic → Freshwater → Drinking Water → Unchlorinated → Wastewater	3.57%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	3.57%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.57%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.79%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.89%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Permafrost And Active Layer Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost And Active Layer Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.89%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.89%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908032	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_all	Environmental	Open in IMG/M
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300000878	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-5 cm-9A)- 1 week illumina	Environmental	Open in IMG/M
3300000880	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-65cm-20A)- 1 week illumina	Environmental	Open in IMG/M
3300000887	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-65cm-16A)- 1 week illumina	Environmental	Open in IMG/M
3300001380	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 m	Environmental	Open in IMG/M
3300001535	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illumina	Environmental	Open in IMG/M
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300001537	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-65 cm-11A)- 1 week illumina	Environmental	Open in IMG/M
3300002025	Permafrost and active layer soil microbial communities from McGill Arctic Research Station (MARS), Canada, for enrichment studies - Sample_D1	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009777	Wastewater microbial communities from Netherlands to study Microbial Dark Matter (Phase II) - VDW unchlorinated drinking water	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300011971	Permafrost microbial communities from Nunavut, Canada - A7_80cm_12M	Environmental	Open in IMG/M
3300011987	Permafrost microbial communities from Nunavut, Canada - A20_80cm_0M	Environmental	Open in IMG/M
3300011991	Permafrost microbial communities from Nunavut, Canada - A34_65cm_12M	Environmental	Open in IMG/M
3300011996	Permafrost microbial communities from Nunavut, Canada - A39_65cm_12M	Environmental	Open in IMG/M
3300011998	Permafrost microbial communities from Nunavut, Canada - A30_35cm_6M	Environmental	Open in IMG/M
3300012001	Permafrost microbial communities from Nunavut, Canada - A24_80cm_12M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012224	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012377	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012405	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013501	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25M	Environmental	Open in IMG/M
3300013764	Permafrost microbial communities from Nunavut, Canada - A28_35cm_6M	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300015079	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6b, vegetation/snow interface)	Environmental	Open in IMG/M
3300015084	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-5a, rocky medial moraine)	Environmental	Open in IMG/M
3300015086	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-5c, rocky medial moraine)	Environmental	Open in IMG/M
3300015171	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3a, vegetated patch on medial moraine)	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300025173	Wastewater microbial communities from Netherlands to study Microbial Dark Matter (Phase II) - VDW unchlorinated drinking water (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027819	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 m (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028006	Soil microbial communities from hillslope of Landscape Evolution Observatory, University of Arizona, Oracle, AZ, United States - 2-4-E_N	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300030975	Forest soil eukaryotic communities from Alaska, USA, for a soil warming experiment in a boreal forest - Alaskan Soil AK pilot (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030997	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030998	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031047	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Perma_A_C_00762020	2124908032	Soil	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGSPVFYRITKVDEVPNRTSYTASAKFEPKGDIRPAS
E4A_10566880	2170459003	Grass Soil	VIRLVGGPLAKQTVTSGAVQVGSLLRLTRPSGLLTFYRVTHIDPVPNRTSFTASAKFEPKGDGRDAGRAPAPQKVPTPEG
AL9A1W_12726302	3300000878	Permafrost	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGSPVFYRITKVDEVPN
AL20A1W_10288572	3300000880	Permafrost	MPIETIIKLTGGPLSNKIVNAGAVQLGSLIRLTRHSGSPVFYRITKMDEVPNRTSYTATAKFEPKGDGR*
AL20A1W_11153023	3300000880	Permafrost	VPIETIIRLTGGPLANKTVNAGPVSVGALIRLTRPSGSLAFYRITKVDAVPNRTSFTATAKFEPKGDGRPA*
AL20A1W_11279151	3300000880	Permafrost	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGSPVFYRITKVDEVPNRTSYTASAKFEPKGDLKATAG*
AL16A1W_100165972	3300000887	Permafrost	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGSPVFYRITKVDEVPNRTSYTASAKFEPKGDIRPAS*
JGI1356J14229_100502833	3300001380	Groundwater	MGTSISPVPIDTTIRLSGGPLAKKTVTSGAVAVGQLLRLTRPSGALAFYRITRLEQVPDRTSFTATATFEPKGDGR*
JGI1356J14229_100573271	3300001380	Groundwater	MRTSIRPVPVDTTIRLSGGPLAKKTVTSGAVAVGQLLRLTRPSGALAFYRITRLEQVPDRTSFTATATFEPKGDGR*
A3PFW1_100798231	3300001535	Permafrost	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGSPVFYRITKVDEVPNRTSYT
A1565W1_101008501	3300001536	Permafrost	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGSPVFYRITKVDEVPNRTSYTASAKFEPKGDLKSA*
A2065W1_105060763	3300001537	Permafrost	VPVETIIRLTGGPLANKTVNAGPVTVGALIRLTRPAGSLAFYRITKVDPVPNRTSFTATAKFEPKGDGRPA
A2065W1_114977531	3300001537	Permafrost	MPIETIIKLTGGPLSNKIVNAGAVKLGSLIRLTRQSGSPVFYRITKVDEVPNRTSYTANAKFEPKGDGR*
smpD1_10488352	3300002025	Permafrost And Active Layer Soil	MPIETTIRLSGGPLSNKLVNAGPVKIGSLIRLTRQSGSPVFYRITKVDEVPNRTSYTASAKFEPKGDGR*
JGI25616J43925_100804173	3300002917	Grasslands Soil	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSYTASAKFEPKGDKGPLAG*
Ga0062593_1003133232	3300004114	Soil	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSFTASAKFEPKGDIKTA*
Ga0066683_102416523	3300005172	Soil	MMPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSFTASAKFEPKGDLKPAS*
Ga0066680_103696402	3300005174	Soil	MPAMPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSFTASAKFEPKGDIKTA*
Ga0066673_104782401	3300005175	Soil	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVVEVPNRTSFTASAKFEPKGDIKTA*
Ga0066679_104271733	3300005176	Soil	MMPIETVIRLTGGPLSNKIVNAGPVKLGSLIRLTRQSGSPVFYRITKVDEVPNRTSYTASAKFEPKGDTGK
Ga0066679_108104322	3300005176	Soil	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSYTASAKFEPKGDLKPAGDLKPAS*
Ga0066678_109926551	3300005181	Soil	MMPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSFTASAKFEPKGD
Ga0070709_101548132	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSFTASAKFEPKGDMKTA*
Ga0070709_101844171	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSFTASAKFEPKGDLKASAG*
Ga0070708_1000024594	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VPVETSIRLSGGPLAGKMVNAGAVNVGSLLRLVRPAGSLVFYRVTHVDPVPNRTSFTASAKFEPKGDGR*
Ga0070708_1000170084	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGSPVFYRITKVDEVPNRTSYTASAKFEPKGDLKTG*
Ga0070708_1001169364	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPIETVIRLTGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSYTASAKFEPKGDLRPAS*
Ga0070708_1019734001	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSFTASAKFEPKGD
Ga0066689_106820121	3300005447	Soil	MMPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSFTASAKF
Ga0066687_108701792	3300005454	Soil	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGSPVFYRITKVDEVPNRTSYTASAKFEPKGDIKTA*
Ga0070706_1000063907	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSYTASAKFEPKGDLKTG*
Ga0070706_1014797431	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	SGGPLSNKIVNAGPVKLGSLIRLTRQSGSPVFYRITKVDEVPNRTSFTASAKFEPKGDLKPAGDLKPAS*
Ga0070707_1007289912	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSFTASAKFEPKGDLRPAS*
Ga0070698_1000933882	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGSPVFYRITKVDEVPNRTSFTASAKFEPKGDLKASAG*
Ga0070730_100095494	3300005537	Surface Soil	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSFTASAKFEPKGDLKSAS*
Ga0068853_1007135341	3300005539	Corn Rhizosphere	SLLMPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSFTASAKFEPKGDIRAG*
Ga0066703_107633921	3300005568	Soil	MPIETVIRLSGGPPSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNR
Ga0066702_103732221	3300005575	Soil	LMPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSFTASAKFEPKGDLKPAS*
Ga0066706_102576983	3300005598	Soil	MMPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSFTASAKFEPKGDIKTA*
Ga0068856_1008948783	3300005614	Corn Rhizosphere	MPIETVIRLTGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSFTASAKFEPKGDIRAG*
Ga0066696_100182311	3300006032	Soil	IETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSYTASAKFEPKGDIKTA*
Ga0066696_105423822	3300006032	Soil	LMPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSYTASAKFEPKGDLKPAGDLKPAS*
Ga0066652_1013007282	3300006046	Soil	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGSPVFYRITKVDEVPNRTSFTASAKFEPKGDIKT
Ga0070712_1015305042	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSFTASAKFEPKGDMKTA*
Ga0066659_105897043	3300006797	Soil	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSYTASAKFEPKGDLKPAGDLK
Ga0075425_1000746087	3300006854	Populus Rhizosphere	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSFTASAKFEPKGDIRAG*
Ga0102924_10178506	3300007982	Iron-Sulfur Acid Spring	MPIETVIRLSGGPLSKKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSFTASAKFEPKGDIKSA*
Ga0066710_1001326334	3300009012	Grasslands Soil	MPAMPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSFTASAKFEPKGDIKTA
Ga0099828_102683921	3300009089	Vadose Zone Soil	MMPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSFTASAKFEPKGDLRPAS*
Ga0099827_118923512	3300009090	Vadose Zone Soil	MPIETVIRLSGGPLANKTVNAGPVKLGSLIRLTRQSGSPVFYRITKVDEVPNRTSYTASAKFEPKGDLRPAS*
Ga0066709_1015897151	3300009137	Grasslands Soil	RARPFSIPMMPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSFTASAKFEPKGDLRPAS*
Ga0066709_1029979302	3300009137	Grasslands Soil	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSYTASAKFEPKGDIKTA*
Ga0105164_100177084	3300009777	Wastewater	VPIDTTIRLSGGPLAKKTVTSGAVLVGQLLRLTRPSGALAFYRVTRLEQVPDRTSFTATATFEPKGDGR*
Ga0105164_100878572	3300009777	Wastewater	VPVETSIRLSGGPLAGKMVNAGPVNVGSLLRLVRPAGSLVFYRVTHVDPVPNRTSFIGSAKFEPKGDGR*
Ga0134070_101572093	3300010301	Grasslands Soil	MMPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSFTAS
Ga0120175_10188581	3300011971	Permafrost	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGSPVFYRITKVDEVPNRTSYTASAKFEPKGDI
Ga0120164_10104253	3300011987	Permafrost	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGSPVFYRITKVDEVPNRTSFTASAKFEPKGDIKTA*
Ga0120153_10005658	3300011991	Permafrost	VPIETIIRLTGGPLANKTVNAGPVTVGALIRLTRPAGSLAFYRITKVDPVPNRTSFTATAKFEPKGDGRPA*
Ga0120153_10042946	3300011991	Permafrost	VPVETIIRLTGGPLANKTVNAGPVTVGALIRLTRPAGSLAFYRITKVDPVPNRTSFTATAKFEPKGDGRPA*
Ga0120156_10205363	3300011996	Permafrost	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGSPVFYRITKVDEVPNRTSFTARAKFEPKGDIKTT*
Ga0120114_10038255	3300011998	Permafrost	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSFTASAKFEP
Ga0120167_10193121	3300012001	Permafrost	VPIETIIRLTGGPLANKTVNAGPVTVGALIRLTRPAGSLAFYRITKVDAVPNRTSFTATAKFEPKGDGRPA*
Ga0137389_108706432	3300012096	Vadose Zone Soil	MMPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGALVFYRITKVDEVPNRTTFTASAKFEP
Ga0137388_109913642	3300012189	Vadose Zone Soil	MMPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSFTASAKFEPKGDLRPA
Ga0137374_101938123	3300012204	Vadose Zone Soil	MVETTIRLSGGPLANRTVNSGAVQVGSLLRLTRQNGAPVFYRVTKVDQVPNRTSFTGAAKFEPKGDRGSA*
Ga0137380_115823112	3300012206	Vadose Zone Soil	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSFTASARFEPKGDIKTA*
Ga0137379_105419041	3300012209	Vadose Zone Soil	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRMSFTASAKFEPKGDLKSAS*
Ga0137379_113180842	3300012209	Vadose Zone Soil	MTVMPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGSPVFYRITKVDEVPNRTSFTASAKFEPKGDLKSAT*
Ga0137378_104111942	3300012210	Vadose Zone Soil	MMPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGSPVFYRITKVDEVPNRTSYTASAKFEPKGDLKPAGDLKPAS*
Ga0134028_12092061	3300012224	Grasslands Soil	MPIENVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPN
Ga0137372_100497213	3300012350	Vadose Zone Soil	MVETTIRLSGGPLANRTVNSGAVQVGSLLRLTRQNGAPVFYRVTKVYQVPNRTSFTGAAKFEPKGDRGSA*
Ga0137375_109917282	3300012360	Vadose Zone Soil	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSYTASAKFEPKGDIKAPTAS*
Ga0134029_10452241	3300012377	Grasslands Soil	MPIDTVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSFTASAKFEPKG
Ga0134041_10240142	3300012405	Grasslands Soil	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSFTASAKF
Ga0120154_10463662	3300013501	Permafrost	VPIETIIRLTGGPLANKTVNAGPVSVGALIRLTRPSGSLAFYRITKVDAVP
Ga0120111_10531673	3300013764	Permafrost	MPIETVIRPSGGPLSNKIVNAGPVKLGSLIRLTRQSGSPVFYRITKVDEVPNRTSFTASAKFEPKGDIKTA*
Ga0120158_103689282	3300013772	Permafrost	MPIETVIKLTGGPLSNKIVNAGAVKLGSLIRLTRQSGSPVFYRITKVDEVPNRTSYTASAKFEPKGDGR*
Ga0167657_10062553	3300015079	Glacier Forefield Soil	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGSPVFYRITKVDEVPNRTSFTASAKFEPKGDIKTVV*
Ga0167654_10570862	3300015084	Glacier Forefield Soil	VPIDTTIHLTGGPLANKTVTSGAVAIGQLLRLTRPAGSLAFYRITRLEQVPNRTSFTATAKFEPKGDGR*
Ga0167655_10395061	3300015086	Glacier Forefield Soil	MPIETVIKLTGGPLSSKIVNAGAVQLGSLIRLTRHSGSPVFYRITKVDVVPNRTSYTATAKFEPKGDGR*
Ga0167648_10866711	3300015171	Glacier Forefield Soil	VPIETIIRLTGGPLANKTVNAGPVSVGALIRLTRPAGSLAFYRITKVDAVPNRTSFTATAKFEPKGDGR*
Ga0066662_117757131	3300018468	Grasslands Soil	MMPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSFTASAKFEPKGDLKPAS
Ga0066669_101748192	3300018482	Grasslands Soil	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSYTASAKFEPKGDIKTA
Ga0193722_10291902	3300019877	Soil	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSFTASAKFEPKGDIKTA
Ga0215015_105719143	3300021046	Soil	MPIETVIRLSGGPLSNKVVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSFTASAKFEPKGDLRPAG
Ga0193719_100440022	3300021344	Soil	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGSPVFYRITKVDEVPNRTSFTASAKFEPKGDIKTA
Ga0209824_100241673	3300025173	Wastewater	VPVETSIRLSGGPLAGKMVNAGPVNVGSLLRLVRPAGSLVFYRVTHVDPVPNRTSFIGSAKFEPKGDGR
Ga0209824_100638112	3300025173	Wastewater	VPIDTTIRLSGGPLAKKTVTSGAVLVGQLLRLTRPSGALAFYRVTRLEQVPDRTSFTATATFEPKGDGR
Ga0207684_10000029189	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VPVETSIRLSGGPLAGKMVNAGAVNVGSLLRLVRPAGSLVFYRVTHVDPVPNRTSFTASAKFEPKGDGR
Ga0207684_100245112	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSYTASAKFEPKGDLKTG
Ga0207684_105841181	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSFTASAKFEPKGDLKPAGDLKPAS
Ga0207654_107568212	3300025911	Corn Rhizosphere	MPIETVIRLTGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSFTASAKFEPKGDIRAG
Ga0207646_113654582	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSFTASAKFE
Ga0207644_108532902	3300025931	Switchgrass Rhizosphere	MPIETVIRLSGGPLSNKIVNAGPVKVGSLIRLTRQSGAPVFYRITKVDEVPNRTSFTASAKFEPKGDIRAG
Ga0209687_13097811	3300026322	Soil	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGSPVFYRITKVDEVPNRTSYTASAKFEPKGDIKTA
Ga0209802_13219602	3300026328	Soil	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSFTASAKFEPK
Ga0209577_103572041	3300026552	Soil	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSYTASAKFEPK
Ga0209726_100182553	3300027815	Groundwater	MRTSISPVPVDTTIRLSGGPLAKKTVTSGAVAVGQLLRLTRPSGALAFYRITRLEQVPDRTSFTATATFEPKGDGR
Ga0209514_100031042	3300027819	Groundwater	MGTSISPVPIDTTIRLSGGPLAKKTVTSGAVAVGQLLRLTRPSGALAFYRITRLEQVPDRTSFTATATFEPKGDGR
Ga0209514_100218872	3300027819	Groundwater	MRTSIRPVPVDTTIRLSGGPLAKKTVTSGAVAVGQLLRLTRPSGALAFYRITRLEQVPDRTSFTATATFEPKGDGR
Ga0209166_100429801	3300027857	Surface Soil	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSFTASAKFEPKGDLKS
Ga0247717_10056892	3300028006	Soil	VPVETTIRLTGGPLANKTVTAGQVSVGSLIRLTRPAGRVAFYRVTWVEAVPNRTTFTGRATFEPKGDGG
Ga0307291_11340601	3300028707	Soil	MPIETVIRLTGGPLSNKIVNAGPVKLGSLIRLTRQSGSPVFYRITKVDEVPNRTSYTASAKFEPKGDLKTA
Ga0307312_112032182	3300028828	Soil	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRMSFTASAKFEPKGDIKTA
Ga0099845_15967372	3300030975	Boreal Forest Soil	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSFTASAKFEPKGDLRPAS
Ga0073997_122578732	3300030997	Soil	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGSPVFYRITKVDEVPNRTSFTASAKFEPKGDLKPAS
Ga0073996_100827962	3300030998	Soil	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSR
Ga0073996_100886231	3300030998	Soil	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSFTASA
Ga0073995_100104971	3300031047	Soil	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSFTASAKFEPKGDLKTA
Ga0315281_100207944	3300032163	Sediment	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGSPVFYRITKVDEVPNRTSFTASAKFEPKGDIKSA
Ga0307471_1015425291	3300032180	Hardwood Forest Soil	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSFTASAKFEPKGDLKPAS
Ga0310812_102108173	3300032421	Soil	MPIETVIRLSGGPLSNKIVNAGPVKLGSLIRLTRQSGAPVFYRITKVDEVPNRTSFT

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084524

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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