NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F084629

Metagenome Family F084629

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F084629
Family Type Metagenome
Number of Sequences 112
Average Sequence Length 60 residues
Representative Sequence MEMQRGVCVIDLFGVSYDGTLPSIVFACDEIWFGLFAVAPPNPPDLESAGRPEGRHCLSL
Number of Associated Samples 87
Number of Associated Scaffolds 112

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 75.00 %
% of genes near scaffold ends (potentially truncated) 29.46 %
% of genes from short scaffolds (< 2000 bps) 82.14 %
Associated GOLD sequencing projects 84
AlphaFold2 3D model prediction Yes
3D model pTM-score0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(23.214 % of family members)
Environment Ontology (ENVO) Unclassified
(23.214 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(49.107 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 20.45%    Coil/Unstructured: 79.55%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.36
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 112 Family Scaffolds
PF00226DnaJ 51.79
PF00582Usp 4.46
PF02922CBM_48 3.57
PF01053Cys_Met_Meta_PP 2.68
PF07681DoxX 1.79
PF01336tRNA_anti-codon 0.89
PF03795YCII 0.89
PF00884Sulfatase 0.89
PF01797Y1_Tnp 0.89
PF00211Guanylate_cyc 0.89
PF14417MEDS 0.89
PF01243Putative_PNPOx 0.89
PF02322Cyt_bd_oxida_II 0.89

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 112 Family Scaffolds
COG0075Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucGAmino acid transport and metabolism [E] 2.68
COG01567-keto-8-aminopelargonate synthetase or related enzymeCoenzyme transport and metabolism [H] 2.68
COG0399dTDP-4-amino-4,6-dideoxygalactose transaminaseCell wall/membrane/envelope biogenesis [M] 2.68
COG0436Aspartate/methionine/tyrosine aminotransferaseAmino acid transport and metabolism [E] 2.68
COG0520Selenocysteine lyase/Cysteine desulfuraseAmino acid transport and metabolism [E] 2.68
COG0626Cystathionine beta-lyase/cystathionine gamma-synthaseAmino acid transport and metabolism [E] 2.68
COG1921Seryl-tRNA(Sec) selenium transferaseTranslation, ribosomal structure and biogenesis [J] 2.68
COG1982Arginine/lysine/ornithine decarboxylaseAmino acid transport and metabolism [E] 2.68
COG2008Threonine aldolaseAmino acid transport and metabolism [E] 2.68
COG2873O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependentAmino acid transport and metabolism [E] 2.68
COG4100Cystathionine beta-lyase family protein involved in aluminum resistanceInorganic ion transport and metabolism [P] 2.68
COG2259Uncharacterized membrane protein YphA, DoxX/SURF4 familyFunction unknown [S] 1.79
COG4270Uncharacterized membrane proteinFunction unknown [S] 1.79
COG1294Cytochrome bd-type quinol oxidase, subunit 2Energy production and conversion [C] 0.89
COG1943REP element-mobilizing transposase RayTMobilome: prophages, transposons [X] 0.89
COG2114Adenylate cyclase, class 3Signal transduction mechanisms [T] 0.89
COG2350YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHisSecondary metabolites biosynthesis, transport and catabolism [Q] 0.89

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908045|KansclcFeb2_ConsensusfromContig506594All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium898Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101778636All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium779Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101779052All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium931Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101781464All Organisms → cellular organisms → Bacteria2177Open in IMG/M
3300002899|JGIcombinedJ43975_10022360All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae1017Open in IMG/M
3300002899|JGIcombinedJ43975_10075938All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium592Open in IMG/M
3300003319|soilL2_10078869All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1214Open in IMG/M
3300003324|soilH2_10379998All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1788Open in IMG/M
3300003993|Ga0055468_10015356All Organisms → cellular organisms → Bacteria1580Open in IMG/M
3300003993|Ga0055468_10124818All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium747Open in IMG/M
3300003996|Ga0055467_10153689All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium690Open in IMG/M
3300005158|Ga0066816_1028302All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium503Open in IMG/M
3300005164|Ga0066815_10006487All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1320Open in IMG/M
3300005187|Ga0066675_10760304All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium730Open in IMG/M
3300005289|Ga0065704_10217829All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1085Open in IMG/M
3300005294|Ga0065705_10016303All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1838Open in IMG/M
3300005294|Ga0065705_10153494All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae1903Open in IMG/M
3300005445|Ga0070708_101760174All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium575Open in IMG/M
3300005536|Ga0070697_100011028All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria7059Open in IMG/M
3300005553|Ga0066695_10211866All Organisms → cellular organisms → Bacteria1217Open in IMG/M
3300005554|Ga0066661_10460302All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium775Open in IMG/M
3300005556|Ga0066707_10642242All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium672Open in IMG/M
3300006049|Ga0075417_10281227All Organisms → cellular organisms → Bacteria803Open in IMG/M
3300006049|Ga0075417_10351247All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium722Open in IMG/M
3300006173|Ga0070716_100613919All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium820Open in IMG/M
3300006844|Ga0075428_101169113All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium811Open in IMG/M
3300006845|Ga0075421_101354154All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium785Open in IMG/M
3300006847|Ga0075431_100629697All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1054Open in IMG/M
3300006852|Ga0075433_10269931All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1508Open in IMG/M
3300006852|Ga0075433_10968276All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium741Open in IMG/M
3300006852|Ga0075433_11875515All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium514Open in IMG/M
3300006880|Ga0075429_101427896All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium603Open in IMG/M
3300006903|Ga0075426_10192856All Organisms → cellular organisms → Bacteria1476Open in IMG/M
3300006904|Ga0075424_100571293All Organisms → cellular organisms → Bacteria → Proteobacteria1208Open in IMG/M
3300007076|Ga0075435_101360674All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium622Open in IMG/M
3300009081|Ga0105098_10033010All Organisms → cellular organisms → Bacteria2043Open in IMG/M
3300009081|Ga0105098_10062135All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1545Open in IMG/M
3300009100|Ga0075418_10114713All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium2861Open in IMG/M
3300009100|Ga0075418_10376154All Organisms → cellular organisms → Bacteria1518Open in IMG/M
3300009100|Ga0075418_10627691All Organisms → cellular organisms → Bacteria → Proteobacteria1157Open in IMG/M
3300009131|Ga0115027_10065439All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1947Open in IMG/M
3300009137|Ga0066709_100004227All Organisms → cellular organisms → Bacteria11362Open in IMG/M
3300009147|Ga0114129_10302550All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium2131Open in IMG/M
3300009147|Ga0114129_11713141All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium767Open in IMG/M
3300009147|Ga0114129_13272340All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium525Open in IMG/M
3300009168|Ga0105104_10142879All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1293Open in IMG/M
3300009798|Ga0105060_125772All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium514Open in IMG/M
3300009809|Ga0105089_1005669All Organisms → cellular organisms → Bacteria1433Open in IMG/M
3300009811|Ga0105084_1002308All Organisms → cellular organisms → Bacteria2359Open in IMG/M
3300009821|Ga0105064_1004781All Organisms → cellular organisms → Bacteria2250Open in IMG/M
3300009823|Ga0105078_1015725All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium844Open in IMG/M
3300009837|Ga0105058_1085339All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium731Open in IMG/M
3300012021|Ga0120192_10041928All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium793Open in IMG/M
3300012022|Ga0120191_10006027All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1341Open in IMG/M
3300012096|Ga0137389_11294231All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium623Open in IMG/M
3300012201|Ga0137365_10331194All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1126Open in IMG/M
3300012204|Ga0137374_10072774All Organisms → cellular organisms → Bacteria3375Open in IMG/M
3300012204|Ga0137374_11182236All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium537Open in IMG/M
3300012205|Ga0137362_11564084All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium546Open in IMG/M
3300012208|Ga0137376_10107522All Organisms → cellular organisms → Bacteria2369Open in IMG/M
3300012209|Ga0137379_10490092All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1137Open in IMG/M
3300012349|Ga0137387_10017354All Organisms → cellular organisms → Bacteria4401Open in IMG/M
3300012353|Ga0137367_10125697All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1880Open in IMG/M
3300012353|Ga0137367_10691208All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium711Open in IMG/M
3300012354|Ga0137366_11008556All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium579Open in IMG/M
3300012355|Ga0137369_10721327All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium684Open in IMG/M
3300012361|Ga0137360_10398414All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1160Open in IMG/M
3300012361|Ga0137360_10849687All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium786Open in IMG/M
3300012362|Ga0137361_10365067All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1325Open in IMG/M
3300012582|Ga0137358_10202453All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1355Open in IMG/M
3300012929|Ga0137404_10508905All Organisms → cellular organisms → Bacteria1075Open in IMG/M
3300012930|Ga0137407_10163528All Organisms → cellular organisms → Bacteria1976Open in IMG/M
3300012957|Ga0164303_10065369All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1675Open in IMG/M
3300012989|Ga0164305_10191009All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1431Open in IMG/M
3300018053|Ga0184626_10021319All Organisms → cellular organisms → Bacteria2632Open in IMG/M
3300018053|Ga0184626_10021826All Organisms → cellular organisms → Bacteria → Proteobacteria2603Open in IMG/M
3300018075|Ga0184632_10020092All Organisms → cellular organisms → Bacteria2827Open in IMG/M
3300018078|Ga0184612_10632407All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium503Open in IMG/M
3300018081|Ga0184625_10036194All Organisms → cellular organisms → Bacteria2437Open in IMG/M
3300018081|Ga0184625_10490257All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium622Open in IMG/M
3300018422|Ga0190265_12049225All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium677Open in IMG/M
3300018433|Ga0066667_12065335All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium526Open in IMG/M
3300019789|Ga0137408_1195637All Organisms → cellular organisms → Bacteria2337Open in IMG/M
3300021178|Ga0210408_10117163All Organisms → cellular organisms → Bacteria2099Open in IMG/M
3300022534|Ga0224452_1203012All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium609Open in IMG/M
3300025910|Ga0207684_11392142All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium574Open in IMG/M
3300025922|Ga0207646_10407872All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1227Open in IMG/M
3300026298|Ga0209236_1294164All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium525Open in IMG/M
3300026331|Ga0209267_1129490All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1057Open in IMG/M
3300026529|Ga0209806_1050315All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1961Open in IMG/M
3300027277|Ga0209846_1000657All Organisms → cellular organisms → Bacteria5819Open in IMG/M
3300027862|Ga0209701_10384733All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium786Open in IMG/M
3300027873|Ga0209814_10009100All Organisms → cellular organisms → Bacteria3891Open in IMG/M
3300027873|Ga0209814_10369006All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium629Open in IMG/M
3300027873|Ga0209814_10417145All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium591Open in IMG/M
3300027880|Ga0209481_10241250All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium909Open in IMG/M
3300027880|Ga0209481_10275222All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium851Open in IMG/M
3300027909|Ga0209382_10164172All Organisms → cellular organisms → Bacteria → Proteobacteria2565Open in IMG/M
3300027909|Ga0209382_10537309All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1282Open in IMG/M
3300027909|Ga0209382_11756011All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium606Open in IMG/M
3300030006|Ga0299907_10195787All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1669Open in IMG/M
3300031446|Ga0170820_11550731All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1182Open in IMG/M
3300031720|Ga0307469_10184281All Organisms → cellular organisms → Bacteria → Proteobacteria1610Open in IMG/M
3300031720|Ga0307469_10355412All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1232Open in IMG/M
3300031720|Ga0307469_10670799All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium936Open in IMG/M
3300031820|Ga0307473_10837473All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium659Open in IMG/M
3300031962|Ga0307479_11769591All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium570Open in IMG/M
3300032180|Ga0307471_101918719All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium741Open in IMG/M
3300032205|Ga0307472_101615819All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium637Open in IMG/M
3300034115|Ga0364945_0247120All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300034150|Ga0364933_217612All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium505Open in IMG/M
3300034176|Ga0364931_0128009All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium813Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere23.21%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil17.86%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil8.93%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil6.25%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand6.25%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment5.36%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.46%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.57%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment2.68%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands2.68%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.68%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment2.68%
TerrestrialEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial1.79%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere1.79%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil1.79%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland0.89%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.89%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere0.89%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908045Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011EnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300002899Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)EnvironmentalOpen in IMG/M
3300003319Sugarcane bulk soil Sample L2EnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300003993Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2EnvironmentalOpen in IMG/M
3300003996Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2EnvironmentalOpen in IMG/M
3300005158Soil and rhizosphere microbial communities from Laval, Canada - mgHAAEnvironmentalOpen in IMG/M
3300005164Soil and rhizosphere microbial communities from Laval, Canada - mgLACEnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009081Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015EnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009131Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1EnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009168Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009798Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_40_50EnvironmentalOpen in IMG/M
3300009809Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40EnvironmentalOpen in IMG/M
3300009811Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30EnvironmentalOpen in IMG/M
3300009821Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30EnvironmentalOpen in IMG/M
3300009823Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50EnvironmentalOpen in IMG/M
3300009837Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30EnvironmentalOpen in IMG/M
3300012021Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T1EnvironmentalOpen in IMG/M
3300012022Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6EnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300018053Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1EnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300018081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300022534Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026298Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026331Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)EnvironmentalOpen in IMG/M
3300026529Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)EnvironmentalOpen in IMG/M
3300027277Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300030006Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67EnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300034115Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17EnvironmentalOpen in IMG/M
3300034150Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17EnvironmentalOpen in IMG/M
3300034176Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
KansclcFeb2_091047302124908045SoilMDMQPGVCVIDLFGMSYDGTLPSIVFACDEIWFGLFAVAPPNPPNLESAGRPEGGHCLSL
INPhiseqgaiiFebDRAFT_10177863623300000364SoilMELERWICVIDLFGVSYDGTMPSIVLACDETWLGLFPVAPPNPPAVESHPDGRLCLTL*
INPhiseqgaiiFebDRAFT_10177905223300000364SoilMDMQPGVCVIDLFGMSXDGTLPSIVFACDEIWFGLFAVAPPNPPNLESAGRPEGRHCLSL
INPhiseqgaiiFebDRAFT_10178146423300000364SoilMEKQPGICVIDLFGVSYDGILPSIVFACDEVWFGLFAVAPPNPPDLESAARPDGRHCLSL
JGIcombinedJ43975_1002236013300002899SoilMDMQPGVCVIDLFGVSYDGTLPSIVFVSDEVWFGIFAVAPPNPPNLESAGRPEGRHCLSL
JGIcombinedJ43975_1007593813300002899SoilRQETLRSLSRSEKMELERWICVIDLFGVSYDGTMPSIVLACDETWLGLFPVAPPNPPXVESHPDGRLCLTL*
soilL2_1007886923300003319Sugarcane Root And Bulk SoilQRWTCVIDWFGRTYDGTIPDIVFACDETWLGLFPVAPPNPSAIESGDGPDGRFFPIR*
soilH2_1037999833300003324Sugarcane Root And Bulk SoilMDPQRWTCVIDWFGRSYDGTMPDIVFACDETWLGLFPVAPPNPPAIESGDGPDGRFFPIR
Ga0055468_1001535633300003993Natural And Restored WetlandsMGGKMEMQRWTLVIDLFGKSYDGMMPSIVFTCDELWLGIFAVAPPNPPAVESHPEGRSYLVP*
Ga0055468_1012481823300003993Natural And Restored WetlandsMETQRWACVIDLFGVSYDGTLPFIMLVCDESWLGLFAVAPPNPPALEAGDRPD
Ga0055467_1015368913300003996Natural And Restored WetlandsLIDSTGVSMETQRWACVIDLFGVSYDGTLPFIMLVCDESWLGLFAVAPPNPPALEAGDRPDGRVSYSR*
Ga0066816_102830213300005158SoilMDMQPGVCVIDLFGMSYDGTLPSIVFACDEIWFGLFAVAPPNPPDLPSAGRPKGRHCLSL
Ga0066815_1000648723300005164SoilMDMQPGVCVIDLFGMSYDGTLPSIVFACDEIWFGLFAVAPPNPPNLESAGRPEGGIVSLFEGRERVLRCFG*
Ga0066675_1076030413300005187SoilMEMQSHQICVIDLFGVSYDGTMPSIVFACDETWLGLFAVGPPNPPAVEAADRPDGRLCLFL*
Ga0065704_1021782923300005289Switchgrass RhizosphereMELERWICVIDLFGVSYDGTIPSIVLACDETWLGLFPVAPPNPPAVESRPDGRLCLTL*
Ga0065705_1001630343300005294Switchgrass RhizosphereMDMQPGVCVIDLFGVSYDGTLPSIVFVSDEVWFGIFAVAPPNPPNLESAGRPEGQHCLSL
Ga0065705_1015349413300005294Switchgrass RhizosphereMERQPGVCVIDLFGVSYDGTLPSIVFACDEVWFGLFAVAPPNPPDLESAARPDGRHCLSL
Ga0070708_10176017413300005445Corn, Switchgrass And Miscanthus RhizosphereMEMQPGVCLIDLFGVSYDGILPSVVFACDEIWFGLFAVAPPNPPDLESAARPEGRHCLSL
Ga0070697_10001102813300005536Corn, Switchgrass And Miscanthus RhizosphereMEFDHWICVIDLFGVSYDGTLPSIALACDENWLGLFAVAPPNPPAVESRPDGRLYLVI*
Ga0066695_1021186613300005553SoilMDSQRWTCVIDLFGKNYDGTMPSIVFTCDETWLGLFPVAPPNPRVIESGERPDGRLFFS*
Ga0066661_1046030223300005554SoilMEFDHWICVIDLFGVSYDGTLPSIALACDENWLGLFAVAPPNPPAVESRPDGRLCLAI*
Ga0066707_1064224213300005556SoilMLEPIEQERKMEMQSHQICVIDLFGVSYDGTMPSIVFACDETWLGLFAVGPPNPPAVEAADRPDGRLCLFL*
Ga0075417_1028122713300006049Populus RhizosphereMELERWICVIDLFGVSYDGAMPSTVLACDETWLGLFPVAPPNPPAVESHPDGRLCLT
Ga0075417_1035124723300006049Populus RhizosphereMELERWTCVIDLFGVSYDGTMPSIMLACDETWLGLFPVAPPNPPAVESHPDGRLCLT
Ga0070716_10061391923300006173Corn, Switchgrass And Miscanthus RhizosphereMEFDHWICVIDLFGVSYDGTLPSIALACDETWLGLFAVAPPNPPAVESRPDGRLYLVI*
Ga0075428_10116911323300006844Populus RhizosphereMELERWTCVIDLFGVSYDGTMPSIMLACDETWLGLFPVAPPNPPAVESHPDGRLCLTL*
Ga0075421_10135415423300006845Populus RhizosphereMELERWICVIDLFGVSYDGAMPSIVLACDETWLGLFPVAPPNPPAVESHPDGRLCLTL*
Ga0075431_10062969713300006847Populus RhizosphereMELERWICVIDLFGVSYDGTMPSIMLACDETWLGLFPVAPPNPPAVESHPDGRLCLTL*
Ga0075433_1026993133300006852Populus RhizosphereTLPSIVFACDEVWFGLFAVAPPNPPDLESAARPDGRHCLSL*
Ga0075433_1096827623300006852Populus RhizosphereRRQEILRSLSRSEKMELERWICVIDLFGVSYDGAMPSTVLACDETWLGLFPVAPPNPPAVESHPDGRLCLTL*
Ga0075433_1187551513300006852Populus RhizosphereMDMQPGVCVIDLFGMSYDGTLPSIVFAYDEIWFGLFAVAPPNPPDLESAGRPEGRHCLSL
Ga0075429_10142789613300006880Populus RhizosphereMELERWICVIDLFGVSYDGAMPSTVLACDETWLGLFPVAPPNPPAVESHPDGRLCLTL*
Ga0075426_1019285613300006903Populus RhizosphereLSRSEKMELERWICVIDLFGVSYDGTMPSIMLACDETWLGLFPVAPPNPPAVESHPDGRLCLTL*
Ga0075424_10057129333300006904Populus RhizosphereVIDLFGMSYDGTLPSIVFACDEIWFGLFAVAPPNPPNLESAGRPEGRHCLSL*
Ga0075435_10136067413300007076Populus RhizosphereMEVRHWDCVIDLFGVSYDGTLPSIALACDESWLGLFAVAPPTPPALESADRPEGRL
Ga0105098_1003301023300009081Freshwater SedimentMDMQPGVCVIGMSYDGTLPSIVFACDEIWFGLFAVAPPNPPDLESAGRPEGRHCLSL*
Ga0105098_1006213523300009081Freshwater SedimentVSYDGTLPSIVFACDEVWFGLFAVAPPNPPDLETAARPDGRQSLGQEDLAV
Ga0075418_1011471343300009100Populus RhizosphereMDLHKWTCVIDLFGKNYDGTMPSIVFACDETWLGLFPVAPPSPVIESGDRPDGRLFFS*
Ga0075418_1037615433300009100Populus RhizosphereMDMQPGVCVIDLFGMSYDGTLPSIVFACDEIWFGLFAVAPPNPPDLESAGRPEGRHCLFESRERVLRCFG*
Ga0075418_1062769113300009100Populus RhizosphereVSYDGTLPSIVFACDEVWFGLFAVAPPNPPDVESAARSDGRHSLSL*
Ga0115027_1006543913300009131WetlandMDMQPGVCVIDLFGMSYDGTLPSIVFACDEIWFGLFAVAPPNPPNLESAGRPEGRHCLFL
Ga0066709_10000422763300009137Grasslands SoilMDSQRWTCVIDLFGKNYDGTMPSIVFTCDETWLGLFPVAPPNPPVIESGERPDGRLFFS*
Ga0114129_1030255013300009147Populus RhizosphereMDSQRWTCVIDWFGKNYDGTMPSIVFTCDETWLGQFAVAPPNPPAIESGDRPDGRFFPSP
Ga0114129_1171314113300009147Populus RhizosphereKMDLQRWTCVIDLFGKNYDGTMPSIVFACDETWLGLFPVAPPSPVIESGDRPDGRLFFS*
Ga0114129_1327234013300009147Populus RhizosphereMELERWICVIDLYGVSYDGTMPSIVLACDETWLGLFPVAPPNPPAVESHPDGRLCLTL*
Ga0105104_1014287923300009168Freshwater SedimentMAMQPGVCVIDLFGMSYDGTLPSIVFACDEIWFGLFAVAPPNPPDLESAGRPEGRHCLSL
Ga0105060_12577223300009798Groundwater SandMDMQPGVCVIDLFGMSYHGTLPSIVFACDEIWFGLFAVAPPNPPDLESAGRPEGRHCLSL
Ga0105089_100566913300009809Groundwater SandEPKMDMQPGVCVIDLFGVSYDGTLSSIVFVSDEVWFGIFAVAPPNPPDLESAGRPEGRDCLSL*
Ga0105084_100230843300009811Groundwater SandMDMQPGVCVIDLFGMSYDGTLPSIVFACDEIWFGLFAVAPPNPPDLESAGPEGRHCLSL*
Ga0105064_100478133300009821Groundwater SandMDMQPGVCVIDLFGMSYDGTLPSIVFACDEIWFGLFAVAPPKPPNLESSGRPEGRHCLSL
Ga0105078_101572523300009823Groundwater SandMDMQPGVCVIDLFGMSYDGTLPSIVFACDEIWFGLFAVAPPNPPDLESAGRPEG
Ga0105058_108533923300009837Groundwater SandMDMQPGVCVIDLFGMSYDGTLPSIVFACDEIWFGLFAVAPPKPPDLESAGRPEGRHCLSL
Ga0120192_1004192813300012021TerrestrialMDMQPGVCVIDLFGMSYDGTLPSIVFACDEIWFGLFAVAPPNPPDLESAVVPRGG
Ga0120191_1000602713300012022TerrestrialMDMQPGVCVIDLFGMSYDGTLPSIVFACDEIWFGLFAVAPPNPPDLESAVVPRGGIVSLFESRERVLRCFG*
Ga0137389_1129423113300012096Vadose Zone SoilMEVRHWDCVIDLFGVSYDGTLPSIALACDESWLGLFAVAPPTPPALESADRPDGQLCLFI
Ga0137365_1033119433300012201Vadose Zone SoilDLFGMSYDGTLPSIVFACDEIWFGLFAVAPPNPPDLESAGRPEGRHCLSL*
Ga0137374_1007277463300012204Vadose Zone SoilMDMQPGVCVIDLFGMSYDGTLPSIVFACDEIWFGLFAVAPPNPPDLESAGRPEGQHCLSL
Ga0137374_1118223613300012204Vadose Zone SoilSRSEKMELERWICVIDLFGVSYDGTMPSIVLACDETWLGLFPVAPPNPPAVESHPDGRLCLTL*
Ga0137362_1156408413300012205Vadose Zone SoilMDMQPGVCVIDLFGVSYDGILPSVVLACDEIWFGLFAVAPPNPPNLESAGRPEGRHCLSL
Ga0137376_1010752223300012208Vadose Zone SoilMELERWICVIDLFGVSYDGTMPSIALACDETWLGLFPVAPPNPPAVESRPDGRLCLTL*
Ga0137379_1049009213300012209Vadose Zone SoilMDMQPGVCVIDLFGMSYDGTLPSIVFACDEIWFGLFTVAPPNPPDLESAGRPEGRHCLSL
Ga0137387_1001735433300012349Vadose Zone SoilMLEPIEQERKMEMQSHQICVIDLFGVSYDRTMPSIVFACDETWLGLFAVGPPNPPAVEAADRPDGRLCLFL*
Ga0137367_1012569733300012353Vadose Zone SoilMELERWICVIDLFGVSYDGTMPSIVLACDEPWLGLFPVAPPNPPAVESHPDGRLCLTL*
Ga0137367_1069120823300012353Vadose Zone SoilMDMQPGVCVIDLFGMSYDGTLPSIVFACDEIWFGLFAVAPPNPSNLESAGRPEGRHCLSL
Ga0137366_1100855623300012354Vadose Zone SoilMELERWICVIDLFGVSYDGTMPSIVLACDETWLGLFPVAPPNPPAVESRPDGRLCLTL*
Ga0137369_1072132723300012355Vadose Zone SoilMTLPSVEEKRKMDSQRWACVIDLFGKNYDGTMPSIVFTCDETWLGLFPVAPPNPLAIESGDRPDGRFFPIP*
Ga0137360_1039841423300012361Vadose Zone SoilMEFDHWICVIDLFGASYDGTLPSIALACDETWLGLFAVAPPNPPAVESRPDGRLYLVI*
Ga0137360_1084968713300012361Vadose Zone SoilIDLFGVSYDGTMPSIVFACDETWLGLFAVGPPNPPAVEAADRPDGRLCLFL*
Ga0137361_1036506733300012362Vadose Zone SoilWLAKCGFTPRSEKMEFDHWICVIDLFGVSYDGTLPSIALACDENWLGLFAVAPPNPPAVESRPDGRLCLAI*
Ga0137358_1020245323300012582Vadose Zone SoilMSWSEKMEFDHWICVIDLFGVSYDGTLPSIALACDENWLGLFAVAPPNPPAVESRPDGRLCLAI*
Ga0137404_1050890513300012929Vadose Zone SoilMKRQPGVCVIDLFGVSYDGTLPSIVFACDEIWFGIFAVAPPNPPDLESAARPDGRHS
Ga0137407_1016352823300012930Vadose Zone SoilMERQPGVCVIDLYGVSYDGTLPGIVFACDEIWFGLFAVAPPNPPDLESAARPDGRHSLPL
Ga0164303_1006536913300012957SoilMDMQPGVCVIDLFGMSYDGTLPSIVFACDEIWFGLFAVAPPNPPDLESAGRPEERHCLSL
Ga0164305_1019100923300012989SoilMEIQPGVCVIDLFGMSYDGTLPSIVFACDEIWFGLFAVAPPNPPNLESAGRPEGRHCLSL
Ga0184626_1002131923300018053Groundwater SedimentMEMQRGVCVIDLFGVSYDGTLPSIVFACDEIWFGLFAVAPPNPPDLDSAGRPEGRHCLSL
Ga0184626_1002182633300018053Groundwater SedimentMDMQPGVCVIDLFGMSYDGTLPSIVFACDEIWFGLFAVAPPNPPNLESAGRPEGRHCLSL
Ga0184632_1002009223300018075Groundwater SedimentMSRAEEFFSGSNRRKKMEMQRGVCVIDLFGVSYDGTLPSIVFACDEIWFGLFAVAPPNPPDLESAGRPEGRHCLSL
Ga0184612_1063240713300018078Groundwater SedimentMDMQPGVCVIDLFGMSYDGTLPSIVFACDEIWFGLFAVAPPNPPNLESAGRPEGRHC
Ga0184625_1003619413300018081Groundwater SedimentMEMQRGVCVIDLFGVSYDGTLPSIVLACDEIWFGLFAVAPPNPPDLDSAGRPEGRHCLSL
Ga0184625_1049025713300018081Groundwater SedimentMDMQPGVCVIDLFGMSYDGTLPSIVFACDEIWFGLFAVAPPNPPNLESAGRPEGGIVSLFESRERVLRCFG
Ga0190265_1204922513300018422SoilHGSKKMDMQRGICVIDLFGVCYDGALPYIMLVSDETWLSLFAVAPPNPPALESSGRPDGRLDLYR
Ga0066667_1206533513300018433Grasslands SoilMELERWICVIDLFGVSYDGTMPSIALACDETWLGLFPVAPPNPPAVESRPDGRLCLTL
Ga0137408_119563713300019789Vadose Zone SoilMDMQPGVCVIDLFGMSYDGTLPSIVFACDEIWFGLFAVAPPNPPDLESAGRPEGRHCLSL
Ga0210408_1011716323300021178SoilMEMQPGVCVIDLFGVSYDGTLPSVVFACDEIWFGLFAVAPPNPPDLESAARPEGRHCLSL
Ga0224452_120301223300022534Groundwater SedimentMEMQRGVCVIDLFGVSYDGTLPSIVFACDEIWFGLFAVAPPNPPDLESAGRPEGRHCLSL
Ga0207684_1139214223300025910Corn, Switchgrass And Miscanthus RhizosphereMEVRHWDCVIDLFGVSYDGTLPSIALACDESWLGLFAVAPPTPPALESADRPEGRLCLFI
Ga0207646_1040787223300025922Corn, Switchgrass And Miscanthus RhizosphereMEIQPGVCVIDLFGVSYDGTLPSIVFACDEIWFGLFAVAPPNPPNLESAGRPEGRHCLSL
Ga0209236_129416423300026298Grasslands SoilELAMLEPIEQERKMEMQSHQICVIDLFGVSYDGTMPSIVFACDETWLGLFAVGPPNPPAVEAADRPDGRLCLFL
Ga0209267_112949023300026331SoilMLEPIEQERKMEMQSHQICVIDLFGVSYDGTMPSIVFACDETWLGLFAVGPPNPPAVEAADRPDGRLCLFL
Ga0209806_105031533300026529SoilMEMQSHQICVIDLFGVSYDGTMPSIVFACDETWLGLFAVGPPNPPAVEAADR
Ga0209846_1000657103300027277Groundwater SandMDMQPGVCVIDLFGMSYDGTLPSIVFACDEIWFGLFAVAPPKPPNLESAGRPEGRHCLSL
Ga0209701_1038473313300027862Vadose Zone SoilMEVRHWDCVIDLFGVSYDGTLPSIALACDESWLGLFAVAPPTPPALESADRPDGRLCLFI
Ga0209814_1000910053300027873Populus RhizosphereMKRQPGVCVIDLFGVSYDGTLPSIVFACDEIWFGIFAVAPPNPPDVESAARSDGRHSLSL
Ga0209814_1036900623300027873Populus RhizosphereMELERWICVIDLFGVSYDGAMPSTVLACDETWLGLFPVAPPNPPAVESHPDGRLCLTL
Ga0209814_1041714513300027873Populus RhizosphereMELERWICVIDLFGVSYDGTMPSIMLACDETWLGLFPVAPPNPPAVESHPDGRLCLTL
Ga0209481_1024125023300027880Populus RhizosphereVIDLFGVSYDGAMPSIVLACDETWLGLFPVAPPNPPAVESHPDGRLCLTL
Ga0209481_1027522213300027880Populus RhizosphereMEKQPGICVIDLFGVSYDGTLPSIVFACDEVWFGLFAVAPPNPPDVESAARSDGRHSLSL
Ga0209382_1016417233300027909Populus RhizosphereMERQPGVCVIDLFGVSYDGTLPSIVFACDEVWFGLFAVAPPNPPDVESAARSDGRHSLSL
Ga0209382_1053730923300027909Populus RhizosphereMELERWTCVIDLFGVSYDGTMPSIMLACDETWLGLFPVAPPNPPAVESHPDGRLCLTL
Ga0209382_1175601113300027909Populus RhizosphereMDMQPGVCVIDLFGMNYDGTLPSIVFACDEIWFGLFAVAPPNPPNLESAGRPEGRHCLSL
Ga0299907_1019578723300030006SoilMEIQRWACVIDLFGVSYDGTLPYIMLVCDEPWLSLFAVAPPNSPAVEAGDRPDGRVSLFR
Ga0170820_1155073123300031446Forest SoilMDMQPGVCVIDLFGMSYDGTLPSIVFARDEIWFGLFAVAPPNPPNLESAGRPEGRHCLSL
Ga0307469_1018428123300031720Hardwood Forest SoilMDMQPGVCVIDLFGMSYDRTLPSIVFACDEIWFGLFAVAPPNPPNLESAGRPEGRHCLSL
Ga0307469_1035541213300031720Hardwood Forest SoilMEFDHWICVIDLFGVSYDGTLPSIALACDETWLGLFAVAPPSPPAVESRPDGRLYLVI
Ga0307469_1067079923300031720Hardwood Forest SoilMEMQPGVCVIDLFGASYDGTLPSVVFACDEIWFGLFAVAPPNPPDLESAARPEGRHCLSL
Ga0307473_1083747323300031820Hardwood Forest SoilMEFDHWICVIDLFGVSYDGTLPSIALACDETWLGLFAVAPPSPPAVESCPDGRLYLVI
Ga0307479_1176959123300031962Hardwood Forest SoilMEMQPGVCVIDLFGVSYDGTLQSVVFACDEIWFGLFAVAPPNPPYLESAARPEGRHCLSL
Ga0307471_10191871923300032180Hardwood Forest SoilASYDGTLPSVVFACDEIWFGLFAVAPPNPPDLESAARPEGRHCLSF
Ga0307472_10161581923300032205Hardwood Forest SoilMEMQPGVCVIDLFGVSYDGTLPSVVFACDEIWFGLFAVAPPNPPDLESAARPEGRH
Ga0364945_0247120_3_1883300034115SedimentKMDMQPGVCVIDLFGMSYDGTLPSIVFACDEIWFGLFAVAPPNPPNLESAGRPEGRHCLS
Ga0364933_217612_141_3233300034150SedimentMEMQPGVCVIDLFGVSYDGTLPSIVFACDEIWFGLFAVAPPNPPNLESAGRPEGRHCLSL
Ga0364931_0128009_2_1723300034176SedimentMDMQPGVCVIDLFGMSYDGTLPSIVFACDEIWFGLFAVAPPNPPNLESAGCPEGRHC

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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