Metagenome / Metatranscriptome Family F084661

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084661
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	47 residues
Representative Sequence	MDRWVPELFLISLLAAFCGGLAWIHDHELFAAAFAAAAVVAASQARPR
Number of Associated Samples	74
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	48.65 %
% of genes near scaffold ends (potentially truncated)	67.86 %
% of genes from short scaffolds (< 2000 bps)	85.71 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (53.571 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.893 % of family members)
Environment Ontology (ENVO)	Unclassified (50.893 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.393 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 77.08% β-sheet: 0.00% Coil/Unstructured: 22.92%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF01068	DNA_ligase_A_M	5.36
PF04392	ABC_sub_bind	2.68
PF07681	DoxX	2.68
PF07045	DUF1330	1.79
PF10958	DUF2759	1.79
PF14534	DUF4440	1.79
PF09926	DUF2158	1.79
PF13356	Arm-DNA-bind_3	0.89
PF00072	Response_reg	0.89
PF02775	TPP_enzyme_C	0.89
PF00440	TetR_N	0.89
PF01656	CbiA	0.89
PF05168	HEPN	0.89
PF01494	FAD_binding_3	0.89
PF00211	Guanylate_cyc	0.89
PF06537	DHOR	0.89
PF13460	NAD_binding_10	0.89
PF01381	HTH_3	0.89
PF11306	DUF3108	0.89
PF04185	Phosphoesterase	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	5.36
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	5.36
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	2.68
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.68
COG4270	Uncharacterized membrane protein	Function unknown [S]	2.68
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.79
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	1.79
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.89
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.89
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.89
COG1895	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	0.89
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.89
COG2250	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	0.89
COG3488	Uncharacterized conserved protein with two CxxC motifs, DUF1111 family	General function prediction only [R]	0.89
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.57 %
All Organisms	root	All Organisms	46.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.57 %
cellular organisms	root	All Organisms → cellular organisms	46.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.57 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	46.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	40.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.57 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	33.93 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.57 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12.50 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	8.04 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.89 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.57 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	8.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.04 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.89 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.57 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.04 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.57 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	0.89 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.57 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.04 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.89 %
Bradyrhizobium arachidis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium arachidis	0.89 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000580\|AF_2010_repII_A01DRAFT_1022768	Not Available	989	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1031236	Not Available	982	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1051945	Not Available	641	Open in IMG/M
3300000955\|JGI1027J12803_105302052	Not Available	622	Open in IMG/M
3300000956\|JGI10216J12902_104576255	Not Available	826	Open in IMG/M
3300000956\|JGI10216J12902_108364411	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300004268\|Ga0066398_10069657	Not Available	757	Open in IMG/M
3300004629\|Ga0008092_11286745	Not Available	616	Open in IMG/M
3300005332\|Ga0066388_100231150	All Organisms → cellular organisms → Bacteria → Proteobacteria	2482	Open in IMG/M
3300005332\|Ga0066388_100262708	Not Available	2367	Open in IMG/M
3300005332\|Ga0066388_100391156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2036	Open in IMG/M
3300005332\|Ga0066388_100479079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1883	Open in IMG/M
3300005332\|Ga0066388_103448935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	807	Open in IMG/M
3300005332\|Ga0066388_104902812	Not Available	680	Open in IMG/M
3300005363\|Ga0008090_10138594	Not Available	1378	Open in IMG/M
3300005445\|Ga0070708_101561328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	615	Open in IMG/M
3300005467\|Ga0070706_100181790	All Organisms → cellular organisms → Bacteria	1963	Open in IMG/M
3300005468\|Ga0070707_100947972	Not Available	826	Open in IMG/M
3300005713\|Ga0066905_100357248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1170	Open in IMG/M
3300005713\|Ga0066905_100687503	All Organisms → cellular organisms → Bacteria → Proteobacteria	876	Open in IMG/M
3300005713\|Ga0066905_101316537	Not Available	650	Open in IMG/M
3300005764\|Ga0066903_100035313	All Organisms → cellular organisms → Bacteria	5766	Open in IMG/M
3300005764\|Ga0066903_105460375	Not Available	670	Open in IMG/M
3300005764\|Ga0066903_106338953	Not Available	617	Open in IMG/M
3300005764\|Ga0066903_108153479	Not Available	536	Open in IMG/M
3300006172\|Ga0075018_10854331	Not Available	503	Open in IMG/M
3300010048\|Ga0126373_10131421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2356	Open in IMG/M
3300010048\|Ga0126373_10361707	Not Available	1466	Open in IMG/M
3300010048\|Ga0126373_11998503	Not Available	642	Open in IMG/M
3300010048\|Ga0126373_12879815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	537	Open in IMG/M
3300010358\|Ga0126370_11858919	Not Available	584	Open in IMG/M
3300010359\|Ga0126376_10206824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1631	Open in IMG/M
3300010359\|Ga0126376_10586281	Not Available	1051	Open in IMG/M
3300010361\|Ga0126378_13449902	Not Available	501	Open in IMG/M
3300010366\|Ga0126379_11355051	Not Available	818	Open in IMG/M
3300010366\|Ga0126379_11593284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium arachidis	758	Open in IMG/M
3300010376\|Ga0126381_100546784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1640	Open in IMG/M
3300010376\|Ga0126381_102203700	Not Available	792	Open in IMG/M
3300010376\|Ga0126381_104788647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	520	Open in IMG/M
3300010398\|Ga0126383_10523925	Not Available	1247	Open in IMG/M
3300010398\|Ga0126383_11046011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	905	Open in IMG/M
3300010398\|Ga0126383_12197988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	638	Open in IMG/M
3300012198\|Ga0137364_11272297	Not Available	549	Open in IMG/M
3300012199\|Ga0137383_11350595	Not Available	506	Open in IMG/M
3300012202\|Ga0137363_10037126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3409	Open in IMG/M
3300012207\|Ga0137381_10729027	Not Available	861	Open in IMG/M
3300012209\|Ga0137379_10305445	Not Available	1502	Open in IMG/M
3300012211\|Ga0137377_11751827	Not Available	542	Open in IMG/M
3300012356\|Ga0137371_10575977	Not Available	866	Open in IMG/M
3300012929\|Ga0137404_10952364	Not Available	784	Open in IMG/M
3300012948\|Ga0126375_10643891	Not Available	816	Open in IMG/M
3300016270\|Ga0182036_10536735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	931	Open in IMG/M
3300016294\|Ga0182041_11259005	Not Available	676	Open in IMG/M
3300016294\|Ga0182041_11541082	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300016319\|Ga0182033_10092793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2199	Open in IMG/M
3300016319\|Ga0182033_11239165	Not Available	669	Open in IMG/M
3300016319\|Ga0182033_11322391	Not Available	648	Open in IMG/M
3300016341\|Ga0182035_10400721	Not Available	1153	Open in IMG/M
3300016341\|Ga0182035_10784956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	835	Open in IMG/M
3300016341\|Ga0182035_11310878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	648	Open in IMG/M
3300016357\|Ga0182032_10632808	Not Available	893	Open in IMG/M
3300016357\|Ga0182032_11451249	Not Available	595	Open in IMG/M
3300016371\|Ga0182034_11215743	Not Available	656	Open in IMG/M
3300016371\|Ga0182034_11361580	Not Available	620	Open in IMG/M
3300016387\|Ga0182040_10058186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2444	Open in IMG/M
3300016387\|Ga0182040_10527768	Not Available	947	Open in IMG/M
3300016387\|Ga0182040_10678821	Not Available	840	Open in IMG/M
3300016404\|Ga0182037_11451627	Not Available	607	Open in IMG/M
3300016404\|Ga0182037_11888151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	535	Open in IMG/M
3300016422\|Ga0182039_11315515	Not Available	655	Open in IMG/M
3300018465\|Ga0190269_12018471	Not Available	503	Open in IMG/M
3300027527\|Ga0209684_1003226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2803	Open in IMG/M
3300027874\|Ga0209465_10599391	Not Available	546	Open in IMG/M
3300031543\|Ga0318516_10529770	All Organisms → cellular organisms → Bacteria → Proteobacteria	675	Open in IMG/M
3300031546\|Ga0318538_10194363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1082	Open in IMG/M
3300031546\|Ga0318538_10632995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	580	Open in IMG/M
3300031561\|Ga0318528_10688259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	547	Open in IMG/M
3300031572\|Ga0318515_10300747	All Organisms → cellular organisms → Bacteria → Proteobacteria	860	Open in IMG/M
3300031573\|Ga0310915_10035319	Not Available	3150	Open in IMG/M
3300031573\|Ga0310915_10108865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1881	Open in IMG/M
3300031573\|Ga0310915_10667977	Not Available	734	Open in IMG/M
3300031573\|Ga0310915_10768926	Not Available	678	Open in IMG/M
3300031719\|Ga0306917_11309142	Not Available	560	Open in IMG/M
3300031724\|Ga0318500_10012257	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3050	Open in IMG/M
3300031736\|Ga0318501_10628768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	590	Open in IMG/M
3300031744\|Ga0306918_11103580	Not Available	614	Open in IMG/M
3300031744\|Ga0306918_11500048	Not Available	515	Open in IMG/M
3300031763\|Ga0318537_10162864	Not Available	831	Open in IMG/M
3300031768\|Ga0318509_10618328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	603	Open in IMG/M
3300031798\|Ga0318523_10162721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1112	Open in IMG/M
3300031832\|Ga0318499_10160282	Not Available	877	Open in IMG/M
3300031833\|Ga0310917_10134700	All Organisms → cellular organisms → Bacteria → Proteobacteria	1619	Open in IMG/M
3300031880\|Ga0318544_10215120	Not Available	742	Open in IMG/M
3300031893\|Ga0318536_10326806	Not Available	777	Open in IMG/M
3300031896\|Ga0318551_10524115	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300031897\|Ga0318520_10725623	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300031910\|Ga0306923_10045483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4817	Open in IMG/M
3300031942\|Ga0310916_10221708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1587	Open in IMG/M
3300031942\|Ga0310916_10400925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1167	Open in IMG/M
3300031947\|Ga0310909_10007567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7209	Open in IMG/M
3300031954\|Ga0306926_11146995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	916	Open in IMG/M
3300032001\|Ga0306922_11073921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	826	Open in IMG/M
3300032010\|Ga0318569_10198108	Not Available	930	Open in IMG/M
3300032025\|Ga0318507_10101634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1199	Open in IMG/M
3300032035\|Ga0310911_10301459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	922	Open in IMG/M
3300032039\|Ga0318559_10594904	Not Available	516	Open in IMG/M
3300032076\|Ga0306924_11210775	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300032091\|Ga0318577_10235281	Not Available	877	Open in IMG/M
3300032261\|Ga0306920_100204451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2947	Open in IMG/M
3300032261\|Ga0306920_100406801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2023	Open in IMG/M
3300032261\|Ga0306920_103510455	All Organisms → cellular organisms → Bacteria → Proteobacteria	579	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.11%
Aquatic	Environmental → Aquatic	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.11%
Sediment	Environmental → Aquatic → Sediment	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.14%
Loam	Environmental → Terrestrial → Soil → Loam	16.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	53.57%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.29%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.68%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.18%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	14.29%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.68%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.79%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004629	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A01 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A01DRAFT_10227681	3300000580	Forest Soil	MDRWVPELFLISLLAAFCGGLAWIHDHELFAAAFAAAAVVAAS
AF_2010_repII_A100DRAFT_10312361	3300000655	Forest Soil	MDRWVPELFLISLLAAFCGGLAWIHDHELFSAAFAAAAVVAASQA
AP72_2010_repI_A001DRAFT_10519451	3300000893	Forest Soil	MDRWVPELFLISLLAAFCGGLAWIHDHELFAAAFAAAAVVAASQARPR*RRLGXXXLG
JGI1027J12803_1053020523	3300000955	Soil	VLISLLAAFCGGLAFAHDQQLFAAVFAVAAVVAGFGARPR*
JGI10216J12902_1045762552	3300000956	Soil	RRVRELVLISLLAAFCGGLAFTHDRPLLSAAFAAAAVVAGFEARPR*
JGI10216J12902_1083644112	3300000956	Soil	LFLISLLAAFCGGLAWVHDHELFAAAFAAASVVAASHARI*
Ga0066398_100696572	3300004268	Tropical Forest Soil	MKSKIEPMMNRRVRELILISLLAAFCGGLAFAHDRQLFAAAFATAAVVAGFAARPR*
Ga0008092_112867452	3300004629	Tropical Rainforest Soil	MDRWVPELFLISLLAAFCGGLAWIHDHELFAAAFAAAAVVAASQARPR*
Ga0066388_1002311504	3300005332	Tropical Forest Soil	DRWVPELFLISLLAAICGGLAWIHDRELFAAAFAAAAVVAASHARI*
Ga0066388_1002627082	3300005332	Tropical Forest Soil	MDRWVPELFLISLLAASCAGLALIHDHELFAAAFAAAAVVAGSHARPR*
Ga0066388_1003911562	3300005332	Tropical Forest Soil	MDLWGPELFLISLLAAFCGGLAWIHDHELFAAAFAAAAVVAGSQARPS*
Ga0066388_1004790792	3300005332	Tropical Forest Soil	MDRWVPELFLISLLAAFCGGLAWIHDHELFAAGFAAAAVVAASQARPR*
Ga0066388_1034489352	3300005332	Tropical Forest Soil	MDRWVPELFLISLLAAFCGGLAWIYDHELFAAAFAAAAVVAASQARPR*
Ga0066388_1049028122	3300005332	Tropical Forest Soil	MMMDRQVRELVLIFLLAAFCGGLAWALDHELFAAAFAAAAVVAGFEARPR*
Ga0008090_101385944	3300005363	Tropical Rainforest Soil	MDRWVPELFLISLLAAFCGGLAWIHDHELFAAAFAAAAVVAASQ
Ga0070708_1015613282	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VINMDRWAPELFLISLLAAFCGGLAWTHDHEMFAAAFAAAAVVAASQARPR*
Ga0070706_1001817902	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MDRWVPELFLISLLAAFCGGLAWVHDHELFAAAFAAASVVAASHARI*
Ga0070707_1009479721	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKSKIGPMMNRRVRELVLISLLAAFCGGLAWTHNQELFAATFAAATVVAGFEA
Ga0066905_1003572484	3300005713	Tropical Forest Soil	MLDRRAVELVLISLLAAFCGGLAWALDDELFAAAFAAAAVTGAFVLWPP*
Ga0066905_1006875032	3300005713	Tropical Forest Soil	MMDRQVRELVLIFLLAAFCGGLAWALDHELFAAAFAAAAVVAGFEARPR*
Ga0066905_1013165373	3300005713	Tropical Forest Soil	MGDRPELFLISILAAFCSGLAWTHEYELFAAAFAA
Ga0066903_1000353132	3300005764	Tropical Forest Soil	MDRWVPELFLISLLAAFCGDLAWIHDHELFAAAFAAAAVVAASQARPR*
Ga0066903_1054603752	3300005764	Tropical Forest Soil	AKPRKNGGDNMDRWVPELFLISLLAAFCGGLAWIHDHELFAAAFAAAAVVAASQARPR*
Ga0066903_1063389531	3300005764	Tropical Forest Soil	ILRSEGDNMDRWVPELFLISLLAAFCGGLAWIHDHELFAAAFAAAAVVAASQARPR*
Ga0066903_1081534791	3300005764	Tropical Forest Soil	MDRWVPELFLISLLAAFCGGLAWIHDHELFAAAFAAA
Ga0075018_108543311	3300006172	Watersheds	MNRRVRELVLISLLAAFCGGLAFAHDRQLFAAAFAVAAVVAGFGARPR*
Ga0126373_101314214	3300010048	Tropical Forest Soil	MDRWVPELFLISLLAAFCGGLAWFHDHELFAAAFAAAAVVAASQARPR*
Ga0126373_103617074	3300010048	Tropical Forest Soil	MDRWVPELFLISLLAAFCGGPAWIHDHELFAAAFAAAAVVAASQARPR*
Ga0126373_119985031	3300010048	Tropical Forest Soil	RSGGDNMDRWVPELFLISLLAAFCGGLAWIHDHELFAAAFAAAAVVAASQARPR*
Ga0126373_128798153	3300010048	Tropical Forest Soil	FLISLLAAFCGGLAWIHDHELFAAAFAAAAVVAASQARPR*
Ga0126370_118589191	3300010358	Tropical Forest Soil	ELFLISLLAAFCGGLAWIHDHELFAAAFAAAAVVAASQARPR*
Ga0126376_102068244	3300010359	Tropical Forest Soil	MKSKIEPMMNRRVRELILISLLAAFCGGLAFAHDRQLFAAAFAT
Ga0126376_105862812	3300010359	Tropical Forest Soil	MDRWVPELFLISLLAAFCGGLAWIHDHELFAAAFAAAAVVAVSQARPR*
Ga0126378_134499021	3300010361	Tropical Forest Soil	YAGGKPRILRSGGDNMDRWVPELFLISLLAAFCGGPAWIHDHELFAAAFAAAAVVAASQARPR*
Ga0126379_113550511	3300010366	Tropical Forest Soil	MDRWVPELFLISLLAAFCGGLAWIHDHELFAAAFAA
Ga0126379_115932842	3300010366	Tropical Forest Soil	GGDNMDRWGPELFLISLLAAFCAGLALIHNHELFAAAFAAAAVVAGSQARPR*
Ga0126381_1005467841	3300010376	Tropical Forest Soil	MKSKIEPMMNRRVRALILISLLAAFCGGLAFAHDRQLFAAAFATAAV
Ga0126381_1022037001	3300010376	Tropical Forest Soil	LCREGILRSGGDNMDRWVPELFLISLLAAFCGGPAWIHDHELFAAAFAAAAVVAASQARPR*
Ga0126381_1047886472	3300010376	Tropical Forest Soil	FFEVPLFLISLLAAFCGGLAWIHDHELFAAAFAAAAVVAASQARPR*
Ga0126383_105239251	3300010398	Tropical Forest Soil	RWVPELFLISLLAAFCGGLAWIHDHELFAAAFAAAAVVAASQARPR*
Ga0126383_110460111	3300010398	Tropical Forest Soil	MDRRVPELFLISLLAAFCSGLAWIHDHELFAAAFAAVAVVAGSQARPR*
Ga0126383_121979881	3300010398	Tropical Forest Soil	GGDNMDRWVPKLFLISLLAAFCGGLAWIHDHELFAAAFAAAAVVAASQARPR*
Ga0137364_112722972	3300012198	Vadose Zone Soil	RVRELVLISLLAAFCGGLAWDHDQKFFAAAFGAEAVVAGFEARPRKK*
Ga0137383_113505951	3300012199	Vadose Zone Soil	GLMMDQRVRELVLISLLAAFCGGLAWDHDQKFFAAAFGAAAVVAGFEARPRKK*
Ga0137363_100371264	3300012202	Vadose Zone Soil	MNRRVRELVLISVLAAFCGGLAWAHDQELFAAAFAAAAVVAGFEARPS*
Ga0137381_107290272	3300012207	Vadose Zone Soil	MMNRRVRELVLISLLAAFCGGLAFAHDRQLFAAAFAAATVVAGFEARPR*
Ga0137379_103054451	3300012209	Vadose Zone Soil	MKSKIGPMMNRRVRELVLISLLAAFCGGLAFAHDRQLFAAAFAAAAVVAGFAARPR*
Ga0137377_117518272	3300012211	Vadose Zone Soil	AAFCGGLAWAHDQELFAAAFAAAAVVAGFEARPS*
Ga0137371_105759771	3300012356	Vadose Zone Soil	MMDQRVRELVLISLLAAFCGGLAWDHDQKFFAAAFGAAAVVAGFEARPRKK*
Ga0137404_109523641	3300012929	Vadose Zone Soil	EAGWIMMDRRARELVLISLLAAFCAGLAWHHDQELFAAAFAVAGVVAGFEARPR*
Ga0126375_106438912	3300012948	Tropical Forest Soil	VRELVLIFLLAAFCGGLAWALDHELFAAAFAAAAVVAGFEARPR*
Ga0182036_105367353	3300016270	Soil	SLLAAFCGGLAWIHDHELFAAAFAAAAVVAGSQARPR
Ga0182041_112590051	3300016294	Soil	MDRWVPELFLISLLAAFCGGLAWIHDHELFAAAFAAAAVVAGSQARP
Ga0182041_115410821	3300016294	Soil	GGDNMDRWVPELFLISLLAAFCGGLAWIHDHELFAAAFAAAAVVAASQARPR
Ga0182033_100927931	3300016319	Soil	GGDNMDRWVPELFLISLLAAFCGGLAWFHDHELFAAAFAAAAVVAASQARPR
Ga0182033_112391651	3300016319	Soil	KRSGGDNMDRWVPELFLISLLAAFCGGLAWIHDHELFAAAFAAAAVVAASQARPR
Ga0182033_113223911	3300016319	Soil	LLAAFCAGLALIHDHELFAAAFAAAAVVAGSQACPR
Ga0182035_104007211	3300016341	Soil	MDRWGPELFLISLLAAFCAGLALIHDHELFAAAFAAAAVV
Ga0182035_107849563	3300016341	Soil	LAAFCAGLALIHDHELFAAAFAAAAVVAGSQACPR
Ga0182035_113108781	3300016341	Soil	MDRWVPELFLISLLAAFCGALAWIHDHELFAAAFAAAAVVAGSQARPR
Ga0182032_106328082	3300016357	Soil	MDRWVPELFLISLLAAFCGGLAWIHDRELFAAAFAAAAVVAASQARPR
Ga0182032_114512491	3300016357	Soil	MDRWVPELFLISLLAAFCGGLAWIHDHELFAAAFAAAA
Ga0182034_112157433	3300016371	Soil	VPELFLISLLAAFCGGLAWIHDHELFAAAFAAAAVIAASQARPR
Ga0182034_113615802	3300016371	Soil	SLLAAVCGGLAWIHDHELFAAAFAAAAVVAGSQARPR
Ga0182040_100581861	3300016387	Soil	RWVPELFLISLLAAFCGGLAWFHDHELFAAAFAAAAVVAASQARPR
Ga0182040_105277684	3300016387	Soil	PELFLISLLAAFCGGLAWIHDHGLFAAAFAAAAVVAASQARPR
Ga0182040_106788211	3300016387	Soil	MDRWVPELFLISLLAASCAGLALIHDHELFAAAFAAAA
Ga0182037_114516271	3300016404	Soil	ILRSGGDNMDRWVPELFLISLLAAFCGGLAWIHDHGLFAAAFAAAAVVAASQARPR
Ga0182037_118881511	3300016404	Soil	MPELFLISLLAAFCGGLAWIHDHELFAAAFAAAAVVAASQARPR
Ga0182039_113155152	3300016422	Soil	SLLAAFCGGLAWIHDHELFAAAFAAAAVIAASQARPR
Ga0134083_101092853	3300017659	Grasslands Soil	LVLISLLAAFCGGLAWAHGQELFAAAFAAAAVVAGFGTALRCT
Ga0190269_120184711	3300018465	Soil	MMNRRVRELVLISLLAAFCGGLAFAHDRQLFAAAFAAAAVVAGFEAQPRKK
Ga0209684_10032264	3300027527	Tropical Forest Soil	MKSKIEPMMNRRVRELILISLLAAFCGGLAFAHDRQLFAAAFATAAVVAGFAARPR
Ga0209465_105993912	3300027874	Tropical Forest Soil	MDRWWPELFLISLLAAFCAGLALIHDHELFAAAFAAAAVVAGSQACPR
Ga0318516_105297702	3300031543	Soil	MDRWVPELFLISLLAAFCGGLAWIHDHELFAAAFAAAAVVAGSQARPR
Ga0318538_101943633	3300031546	Soil	MDRWVPELFLISLLAAFCGGLAWFHDHELFAAAFAAAAVVAASQARPR
Ga0318538_106329951	3300031546	Soil	LFLISLLAAFCGGLAWIHDHELFAAAFAAAAVVAGSQARPR
Ga0318528_106882593	3300031561	Soil	HAKLRKNGGDNMDRWVPELFLISLLAAFCGGLAWFHDHELFAAAFAAAAVVAASQARPR
Ga0318515_103007471	3300031572	Soil	ELFLISLLAAFCGGLAWIHDHELFAAAFAAAAVVAGSQARPR
Ga0310915_100353191	3300031573	Soil	MKSKIGQMMNQRVRELVRISVLAAFCGGLAFAHDRQLFAAAFAAAAVVAGFAARPR
Ga0310915_101088651	3300031573	Soil	MDRRVPELFLISLLAAFCGGLAWIHDHELFAAAFAAAAVIAASQARPR
Ga0310915_106679773	3300031573	Soil	MDRWVPELFLISLLAAFCGGLAWIHDHELFAAAFAAAAVVA
Ga0310915_107689262	3300031573	Soil	MDRWVPELFLISLLAAFCGDLAWIHDHELFAPAFAAAAVIAASQARPR
Ga0306917_113091421	3300031719	Soil	DNMDRWVPELFLISLLAAFCGGLAWIHDHGLFAAAFAAAAVVAASQARPR
Ga0318500_100122571	3300031724	Soil	ILRSGGNNMDRWVPELFLISLLAAFCGGLAWIHDHELFAAAFAAAAVVAASQARPR
Ga0318501_106287683	3300031736	Soil	MDRWGPELFLISLLAAFCAGLALIHDHELFAAAFAAAAVVAGSQA
Ga0306918_111035802	3300031744	Soil	MDRWVPELFLISLLAAFCGGLAWIHDHGLFAAAFAAAAVVAASQARPR
Ga0306918_115000481	3300031744	Soil	GDNMDRWVPELFLISLLAAFCGGLAWIHDHELFAAAFAAAAVIAASQARPR
Ga0318537_101628641	3300031763	Soil	MDRWVPELFLISLLAAFCGGLAWIHDHELFAAAFAAAAVVAASQA
Ga0318509_106183281	3300031768	Soil	RENGGDNMDRWVPELFLISLLAAFCGGLAWIHDHELFAAAFAAAAVVAASQARPR
Ga0318523_101627211	3300031798	Soil	VPELFLISLLAAFCGGLAWIHDHELFAAAFAAAAVVAASQARPR
Ga0318499_101602822	3300031832	Soil	MDRWVPELFLISLLAAFCGGLAWIHDHELFAAAFAAAAVVATSQARPR
Ga0310917_101347001	3300031833	Soil	LLAAFCGGLAWIHDHELFAAAFAAAAVVAASQARPR
Ga0318544_102151201	3300031880	Soil	MMNQRVRELVRISVLAAFCGGLAFAHDRQLFAAAFAAAAVVAGFAARPR
Ga0318536_103268061	3300031893	Soil	MDRWVPELFLISLLAAFCGGLAWFHDHELFAAAFAAAAVVAAS
Ga0318551_105241152	3300031896	Soil	PELFLISLLAAFCGGLAWIHDHELFAAAFAAAAVVAASQARPR
Ga0318520_107256231	3300031897	Soil	ELFLISLLAAFCGGLAWIHDHELFAAAFAAAAVVAASQARPR
Ga0306923_100454831	3300031910	Soil	LRSGGDNMDRWVPELFLISLLAAFCGGLAWIHDHELFAAAFAAAAVVAASQARPR
Ga0310916_102217081	3300031942	Soil	GGVGVINMDRWAPELFLISLLAAFCGGLAWTHDHELFAAAFAAAAVVAASQARPR
Ga0310916_104009251	3300031942	Soil	GDNMDRWVPELFLISLLAAFCGGLAWIHDHELFAAAFAAAAVVAASQARPR
Ga0310909_1000756711	3300031947	Soil	MDPWVPELFLISLLAAICGGLAWIHDHELFAAAFAAAAVVAASHARI
Ga0306926_111469951	3300031954	Soil	WVPELFLISLLAAFCGGLAWIHDHELFAAAFAAAAVVAASQARPR
Ga0306922_110739211	3300032001	Soil	SLLAAFCAGLALIHDHELFAAAFAAAAVVAGSQACPR
Ga0318569_101981081	3300032010	Soil	ISLLAAFCGGLAWIHDHELFAAAFAAAAVVAASQARPR
Ga0318507_101016343	3300032025	Soil	DNMDRWVPELFLISLLAAFCGGLAWFHDHELFAAAFAAAAVVAASQARPR
Ga0310911_103014593	3300032035	Soil	RGKPRKNGGDNMDRWVPELFLISLLAAFCGGLAWIHDHELFAAAFAAAAVVAGSQARPR
Ga0318559_105949042	3300032039	Soil	MDRWVPELFLISLLAAFCGGLAWIHDHELFAAAFAAAAVVAA
Ga0306924_112107751	3300032076	Soil	DNMDRWVPELFLISLLAAFCGGLAWIHDHELFAAAFAAAAVVAASQARPR
Ga0318577_102352811	3300032091	Soil	GNMDRWVPELFLISLLAASCAGLALIHDHELFAAAFAAAAVVAGSHARPR
Ga0306920_1002044513	3300032261	Soil	MDPWVPELFLISLLAALCGGLAWIHDRQLFAAAFAAAAVVAAFQARPR
Ga0306920_1004068011	3300032261	Soil	MDRWMPELFLISLLAAFCGGLAWIHDHELFAAAFAAAAVVAASQARPR
Ga0306920_1035104552	3300032261	Soil	MDRWVPELFLISLLAAFCGGLAWIHDHELFAAAFAAAAVVAGSQAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084661

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences