Basic Information | |
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Family ID | F084687 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 112 |
Average Sequence Length | 53 residues |
Representative Sequence | MKLVRYRSASGEKPGLILDGEIFDLSGSFEALNPRAPTLNDIAAIAAVPAKA |
Number of Associated Samples | 107 |
Number of Associated Scaffolds | 112 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 0.00 % |
% of genes near scaffold ends (potentially truncated) | 0.00 % |
% of genes from short scaffolds (< 2000 bps) | 0.00 % |
Associated GOLD sequencing projects | 103 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.41 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (100.000 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (11.607 % of family members) |
Environment Ontology (ENVO) | Unclassified (31.250 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (42.857 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 13.75% β-sheet: 23.75% Coil/Unstructured: 62.50% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.41 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 112 Family Scaffolds |
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PF01522 | Polysacc_deac_1 | 60.71 |
PF01425 | Amidase | 2.68 |
PF01220 | DHquinase_II | 0.89 |
PF13379 | NMT1_2 | 0.89 |
COG ID | Name | Functional Category | % Frequency in 112 Family Scaffolds |
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COG0726 | Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family | Cell wall/membrane/envelope biogenesis [M] | 60.71 |
COG0154 | Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase | Translation, ribosomal structure and biogenesis [J] | 2.68 |
COG0757 | 3-dehydroquinate dehydratase | Amino acid transport and metabolism [E] | 0.89 |
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Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 100.00 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 11.61% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 7.14% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 6.25% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 6.25% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 6.25% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 5.36% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 4.46% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 4.46% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 3.57% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 3.57% |
Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 3.57% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 3.57% |
Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 2.68% |
Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 2.68% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 2.68% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 2.68% |
Natural And Restored Wetlands | Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands | 1.79% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 1.79% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 1.79% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 1.79% |
Populus Endosphere | Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere | 1.79% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 1.79% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 1.79% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.89% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 0.89% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 0.89% |
Natural And Restored Wetlands | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands | 0.89% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 0.89% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.89% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere | 0.89% |
Corn, Switchgrass And Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 0.89% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.89% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.89% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.89% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 0.89% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300004024 | Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2 | Environmental | Open in IMG/M |
3300004058 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1 | Environmental | Open in IMG/M |
3300004633 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio | Environmental | Open in IMG/M |
3300005277 | Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0 | Host-Associated | Open in IMG/M |
3300005294 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil | Environmental | Open in IMG/M |
3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Environmental | Open in IMG/M |
3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Host-Associated | Open in IMG/M |
3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Host-Associated | Open in IMG/M |
3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Host-Associated | Open in IMG/M |
3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Environmental | Open in IMG/M |
3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Environmental | Open in IMG/M |
3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Host-Associated | Open in IMG/M |
3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Environmental | Open in IMG/M |
3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Host-Associated | Open in IMG/M |
3300005713 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2) | Environmental | Open in IMG/M |
3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Host-Associated | Open in IMG/M |
3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
3300006041 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 | Environmental | Open in IMG/M |
3300006042 | Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 | Host-Associated | Open in IMG/M |
3300006048 | Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Host-Associated | Open in IMG/M |
3300006172 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014 | Environmental | Open in IMG/M |
3300006572 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300006575 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300006580 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300006581 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300006606 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300006804 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 | Environmental | Open in IMG/M |
3300006854 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4 | Host-Associated | Open in IMG/M |
3300009011 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG | Host-Associated | Open in IMG/M |
3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Host-Associated | Open in IMG/M |
3300009156 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2) | Host-Associated | Open in IMG/M |
3300010043 | Tropical forest soil microbial communities from Panama - MetaG Plot_26 | Environmental | Open in IMG/M |
3300010366 | Tropical forest soil microbial communities from Panama - MetaG Plot_24 | Environmental | Open in IMG/M |
3300010371 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1 | Environmental | Open in IMG/M |
3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Host-Associated | Open in IMG/M |
3300010376 | Tropical forest soil microbial communities from Panama - MetaG Plot_28 | Environmental | Open in IMG/M |
3300010400 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2 | Environmental | Open in IMG/M |
3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Host-Associated | Open in IMG/M |
3300012487 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.4.old.130510 | Host-Associated | Open in IMG/M |
3300012951 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG | Environmental | Open in IMG/M |
3300012955 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG | Environmental | Open in IMG/M |
3300012958 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG | Environmental | Open in IMG/M |
3300012984 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG | Environmental | Open in IMG/M |
3300012986 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG | Environmental | Open in IMG/M |
3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Host-Associated | Open in IMG/M |
3300014321 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D1 | Environmental | Open in IMG/M |
3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
3300016294 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 | Environmental | Open in IMG/M |
3300017944 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG | Environmental | Open in IMG/M |
3300018058 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG | Environmental | Open in IMG/M |
3300018064 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG | Environmental | Open in IMG/M |
3300019879 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2 | Environmental | Open in IMG/M |
3300020150 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MG | Environmental | Open in IMG/M |
3300021445 | Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG | Environmental | Open in IMG/M |
3300021560 | Tropical forest soil microbial communities from Panama - MetaG Plot_4 | Environmental | Open in IMG/M |
3300022737 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S094-311B-5 | Environmental | Open in IMG/M |
3300022883 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4 | Environmental | Open in IMG/M |
3300023067 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S221-509R-5 | Environmental | Open in IMG/M |
3300023168 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S064-202C-5 | Environmental | Open in IMG/M |
3300025290 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 | Host-Associated | Open in IMG/M |
3300025321 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025893 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025899 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025905 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) | Environmental | Open in IMG/M |
3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026730 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A5-10 (SPAdes) | Environmental | Open in IMG/M |
3300026773 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A5-11 (SPAdes) | Environmental | Open in IMG/M |
3300026857 | Soil and rhizosphere microbial communities from Laval, Canada - mgLMB (SPAdes) | Environmental | Open in IMG/M |
3300026929 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05.2A3w-12 (SPAdes) | Environmental | Open in IMG/M |
3300027036 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G07A5-10 (SPAdes) | Environmental | Open in IMG/M |
3300027390 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A1-11 (SPAdes) | Environmental | Open in IMG/M |
3300027405 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A1-12 (SPAdes) | Environmental | Open in IMG/M |
3300027438 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A3a-11 (SPAdes) | Environmental | Open in IMG/M |
3300027455 | Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G06K3-12 (SPAdes) | Environmental | Open in IMG/M |
3300027894 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes) | Environmental | Open in IMG/M |
3300027992 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S125-311R-5 | Environmental | Open in IMG/M |
3300027993 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S199-509C-5 | Environmental | Open in IMG/M |
3300028716 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198 | Environmental | Open in IMG/M |
3300028819 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153 | Environmental | Open in IMG/M |
3300028875 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143 | Environmental | Open in IMG/M |
3300028885 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185 | Environmental | Open in IMG/M |
3300030916 | Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
3300031199 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S | Environmental | Open in IMG/M |
3300031226 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S | Environmental | Open in IMG/M |
3300031562 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3 | Environmental | Open in IMG/M |
3300031572 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19 | Environmental | Open in IMG/M |
3300031854 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1 | Environmental | Open in IMG/M |
3300031880 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25 | Environmental | Open in IMG/M |
3300031947 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H | Environmental | Open in IMG/M |
3300032059 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27 | Environmental | Open in IMG/M |
3300032179 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2 | Environmental | Open in IMG/M |
3300033412 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC | Environmental | Open in IMG/M |
3300033550 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
Ga0055436_100999301 | 3300004024 | Natural And Restored Wetlands | MKLVRYRSASGEKPGLILDGEIFDLSGSFEALNPRAPTLDDIEAIAAIPAKALAKVGKGAVLGPPLRGI |
Ga0055498_100814312 | 3300004058 | Natural And Restored Wetlands | MKLVRYRSATGEKPGLILDGEVFDLSGSVAALHPRAPTFADIAAIAAVPA |
Ga0066395_104994511 | 3300004633 | Tropical Forest Soil | MKLVRYRSATGEKPGLILDGEVFDLSGSFSALQPRPPSLADIEAIAAVPTRVLTKAPKDAVLGPPLR |
Ga0065716_10055651 | 3300005277 | Arabidopsis Rhizosphere | MKLVRYRSASGEKPGLILDGEIFDLSGSFEALNPRAPTLNDIAAIAAVPAKALTKIARGAVL |
Ga0065705_108729301 | 3300005294 | Switchgrass Rhizosphere | MKLVRYRSASGEKPGLILDGEIFDLSGSFEALNPRAPTLNDIAAIAAVPAKAL |
Ga0070690_1001402121 | 3300005330 | Switchgrass Rhizosphere | MKLVRYRSASGERPGLFLDGEIFDLSGSFEALNPRAPTLDDIEAIAAVPAKALV |
Ga0070690_1011173012 | 3300005330 | Switchgrass Rhizosphere | MKLVRYRSATGEEPGLILDGEIFDLSGSFSSLNPRAPTLDDIK |
Ga0066388_1001077113 | 3300005332 | Tropical Forest Soil | MKLVRYRSATGEEPGLILDGEVFDLSGSFSSLNPRAPTLDDIEAIAAVPAKALSKAPKDVELASA* |
Ga0066388_1007073461 | 3300005332 | Tropical Forest Soil | MKLVRYRSATGEEPGLILDGEIFDLSGSFSSLNPRAPTLDDIEAIAA |
Ga0066388_1021607012 | 3300005332 | Tropical Forest Soil | MKLVRYRSASGEKPGLILDGEIFDLSGSFAALNPRAPTLDDIEAIAAVPAKALTKVEKGVALGPPLRGI |
Ga0068869_1006744652 | 3300005334 | Miscanthus Rhizosphere | MKLVRYRSASGEKPGLILDGEIFDLSGSFAALNPRAPTLDDI |
Ga0070666_104004461 | 3300005335 | Switchgrass Rhizosphere | MKLVRYHSSTGEKPGLILDGEVFDLSGSFAALTPRAPTFADIAAISAVPAKVLTKAPKESVLGPPLRGIG |
Ga0070667_1000699214 | 3300005367 | Switchgrass Rhizosphere | MKLVRYRSASGEKPGLFLDGEIFDLSGSFEALNPRAPTLDD |
Ga0070711_1004184192 | 3300005439 | Corn, Switchgrass And Miscanthus Rhizosphere | MKLVRYRSATGEKPGLFLDGEIFDLSAGFAALSHRAPTLEHVAAIAAVPVKTLAPMGKGLPL |
Ga0070700_1002289303 | 3300005441 | Corn, Switchgrass And Miscanthus Rhizosphere | MKLVRYRSSTGEKPGLILDGEVFDLSGSFAALTPRAPTFADIAAIS |
Ga0070665_1006180371 | 3300005548 | Switchgrass Rhizosphere | MKLVRYCSSTGEKPGLILDGEVFDLSGSFAALSPRAPTFADIAAI |
Ga0070702_1007807332 | 3300005615 | Corn, Switchgrass And Miscanthus Rhizosphere | MKLVRYRSASGERPGLFLDGEIFDLSGSFEALNPRAPTLDDI |
Ga0068852_1000603311 | 3300005616 | Corn Rhizosphere | MKLVRYRSASSEKPGLILDGEIFDLSGSFAALNPRAPTLDDIEAITAVPAKALVKVEKGAVLGP |
Ga0066905_1004888222 | 3300005713 | Tropical Forest Soil | MKLVRYRSATGERPGLILDGEVFDLSGSFAALNPRAPTLDDIDAIAAVP |
Ga0068866_101068901 | 3300005718 | Miscanthus Rhizosphere | MKLVRYRSATGEEPGLILDGEIFDLSGSFSSLNPRAPTLDDIKAVAAIP |
Ga0066903_1011428971 | 3300005764 | Tropical Forest Soil | MKLVRYRSATGEKPGLMLDGEVFDLSAGFAALNHR |
Ga0066903_1060370931 | 3300005764 | Tropical Forest Soil | MKLVRYRSATGEEPGLILDGEVFDLSGSFSSLNPRAPTLDDIEAIAAVPA |
Ga0075023_1005113981 | 3300006041 | Watersheds | MKLVRYRSATGEKPGLILDGEVFDLSAGFAALSHRAPTLDHIAAIAAVPAKALPKVGKGVAFGPPLRGIG |
Ga0075368_104208642 | 3300006042 | Populus Endosphere | MKLVRYRSASGEKPGLFLDGEIFDLSGSFEALNPRAPTLDDIAAIAAV |
Ga0075363_1008501782 | 3300006048 | Populus Endosphere | MKLVRYRSATGEEPGLILDGEIFDLSGSFSSLNPRAPTLDDIKAVA |
Ga0075018_100795553 | 3300006172 | Watersheds | MKLVRYRSSTGEKPGLILDGEVFDLSGSFAALNPRAPTFADIAAISAVPAKVLTK |
Ga0074051_117349902 | 3300006572 | Soil | MKLVRYRSATGEKPGLILDGEVFDLSAGFAALNHRAPALDHIAAIAAVPAKTFSKVEKGAVLGPPLRGIGKI |
Ga0074053_100005301 | 3300006575 | Soil | MKLVRYRSATDEKPGLILDGEIFDLSGGFAALSHRAPTLDHIAAIAAV |
Ga0074049_127593992 | 3300006580 | Soil | MKLVRYRSATGEKPGLILDGEVFDLSAGFAALNHRAPALDHIAAIAAVPAKTFSKVEKGAVLGPPLRGIGKIIG |
Ga0074048_100122462 | 3300006581 | Soil | MKLVRYRTASGEKPGLILDGEIFDLSGSFAALNPRAPTLDDIEAIAAVPAKALPEVEKGTALGPPLR |
Ga0074062_126826311 | 3300006606 | Soil | MKLVRYRSATGEKPGLFLDGEIFDLSGSFAALNPRAPTLNDIEAIATVPAKALTKVARGAVLGPP |
Ga0079221_115705341 | 3300006804 | Agricultural Soil | MKLVRYRSATGEKPGLFLDGEIFDLSAGFAALSHHAPTLEHVAAIAAVQVKTLAPMGKGLPLGPPLRGIGKIIGVG |
Ga0075425_1019484552 | 3300006854 | Populus Rhizosphere | MKLVRYRSASGEKPGLFLDGEIFDLSGSFEALNPRAPTLDDIEAIAAVPAKALVKV |
Ga0105251_103188142 | 3300009011 | Switchgrass Rhizosphere | MKLVRYRSATGEEPGLILDGEIFDLSGSFSSLNPRAPTLDDI |
Ga0105240_117031022 | 3300009093 | Corn Rhizosphere | MKLVRYCSSTGEKPGLILCGEAVGLSCTFASLTPRAPTFAGIAAMSALPA |
Ga0111538_113192762 | 3300009156 | Populus Rhizosphere | MKLVRYRSATGEEPGLILDGVIFDLSGSFSSLNPRAPRLDDIEAIA |
Ga0126380_101758583 | 3300010043 | Tropical Forest Soil | MKLVRYRSATGEEPGLILDGEVFDLSRSFSALNPRAPTFDDIKAIAAIPAKALSKALKDVVLGPPLRGIG |
Ga0126379_111145472 | 3300010366 | Tropical Forest Soil | MKLVRYRSATGEKPGLVLDGEVFDLSGSFSPLHPRPPTFADIEAIAAMPTKSLTKIPRDTVLG |
Ga0134125_112889582 | 3300010371 | Terrestrial Soil | MKLVRYRSATGEKPGLFLDGDVFDLAGSFSALSPRAPTFDDIAAIAAVPLKALTKIEKGVAFGPPLRGI |
Ga0105239_104908741 | 3300010375 | Corn Rhizosphere | MKLVRYRSASGEKPGLILDGEIFDLSGSFEALNPRAPTLNDIAAIAAVPAKALIKVAKGAVL |
Ga0126381_1051492802 | 3300010376 | Tropical Forest Soil | MKLVRYRSAGGEKPGLILDGEIFDLSGSFSALQPRAPTIADVEAIAGVPVK |
Ga0134122_101165894 | 3300010400 | Terrestrial Soil | MKLVRYRSATGEEPGLILDGEVFVLSGSFSSLNPRAPTLADIEAIAAIPTKALSK |
Ga0105246_101620123 | 3300011119 | Miscanthus Rhizosphere | MKLVRYCSSTGEKPGLILDGEVFDLSGSFAALSPR |
Ga0157321_10013483 | 3300012487 | Arabidopsis Rhizosphere | MKLVRYRSATGEEPGLILDGAIFALSGSFSSLNPPAPTLDDIEAIAAIPAK |
Ga0164300_109460581 | 3300012951 | Soil | MKLVRYRSATGEKPGLIFDGEVFDLSSGFAALGHRAPTH |
Ga0164298_109261501 | 3300012955 | Soil | MKLVRYRSATGEKPGLFLDGEIFDLSAGFAALSHRAPT |
Ga0164299_110774002 | 3300012958 | Soil | MKLVRYRSATGEEPGLILDGEVFDLSGSFSALNPRAPTFDDVKAIAAIPAKALSKVP |
Ga0164309_100491363 | 3300012984 | Soil | MKLVRYRSASSEKPGLILDGAIFDLSGSFPALSPRAPT |
Ga0164304_102926332 | 3300012986 | Soil | MKLVRYRSATGEEPGLILDGEVFDLSGSFSALNPRAPTFDDVKAIAAIPAK |
Ga0157369_116244691 | 3300013105 | Corn Rhizosphere | MKLVRYRSATGEEPGLILDGEIFDLSGSFSSLNPRAPTLDDIKAVAAIPAKAL |
Ga0075353_12227652 | 3300014321 | Natural And Restored Wetlands | MKLVRYRSATGEKPGLILDGEVFDLSGSVAALHPRAPTFADIAAIAAVPANALSKVPKGAVLG |
Ga0132256_1021799212 | 3300015372 | Arabidopsis Rhizosphere | MKLVRYRSASGEKPGLILDGEIFDLSGSFDTLNPRA |
Ga0132255_1046790852 | 3300015374 | Arabidopsis Rhizosphere | MKLVRYRSATGEKPGLALDGEIFDLSGSFSALQPRAPTFADIEAIAAVPAKVLTKVPKDA |
Ga0182041_117580112 | 3300016294 | Soil | MKLVCYRSATGEKPGLILDSEIFDLSGSFSAIHPRPPTFADIEAIAAVPSKALMKAPKDAVLGPPLRGIGEII |
Ga0187786_103938821 | 3300017944 | Tropical Peatland | MKLVRYRSATGEKPGLVLDGEIFDLSAGFAGLNHRAPTLEHVAAIAAVPVKT |
Ga0187766_108106101 | 3300018058 | Tropical Peatland | MKLVRYRSATGEKPGLVLDGEVFDLSGSITALTPRAPTFDDVEAIAA |
Ga0187773_104518752 | 3300018064 | Tropical Peatland | MKLVRYRSATGEKLGLILDGEVFDLSGSVAALHSRAPTFADIAAIAAMPANALSKV |
Ga0193723_10831562 | 3300019879 | Soil | MKLVRYRSATGEEPGLILDDEVFDLSGSFSALNPRAPTLDDIEAIAAIPV |
Ga0187768_11158502 | 3300020150 | Tropical Peatland | MKLVRYRSATGEKPGLVLDGEVFDLSGSITALTPRAPTFDDVEAIAAVPAKALSKVPKGVVLGPPLRGVGKIIGV |
Ga0182009_106800512 | 3300021445 | Soil | MKLVRYRSTTGEKPGLLLDGEIYDLSAGFAALSHRAPTFEH |
Ga0126371_100687155 | 3300021560 | Tropical Forest Soil | MKLVRYRSAIGEEPGLILDGEVFNLSGSFSSLNPRAPTLDDIEAIAAVPAKALSKAPKDVALGP |
Ga0247747_10175312 | 3300022737 | Soil | MKLVRYRSASGEKPGLILDGEIFDLSGSFEALNPRAPTLN |
Ga0247786_10315511 | 3300022883 | Soil | MKLVRYRSASGEKPGLILDGEIFDLSGSFEALNPRAPTLNDIAAIAAV |
Ga0247743_10670622 | 3300023067 | Soil | MKLVRYRSASGEKPGLILDGEIFDLSGSFEALNPRAPTLNDIAAIAAVPAKALTKI |
Ga0247748_10241042 | 3300023168 | Soil | MKLVRYRSASGEKPGLILDGEIFDLSGSFEALNPRAPTLNDIAAIAAVPAKALIKVAKGAVLGPPLRGIGK |
Ga0207673_10271151 | 3300025290 | Corn, Switchgrass And Miscanthus Rhizosphere | MKLVRYRSASSEKPGLILDGEIFDLSGSFAALNPRAPTLDDI |
Ga0207656_104584721 | 3300025321 | Corn Rhizosphere | MKLVRYRSATGEEPGLILDGEIFDLSGSFSSLNPRAPTLDDIKAVAAIPAKALSKAPRDAVLGPPLR |
Ga0207682_100008591 | 3300025893 | Miscanthus Rhizosphere | MKLVRYRSASSEKPGLILDGEIFDLSGSFAALNPRAPTLDDIE |
Ga0207642_102447141 | 3300025899 | Miscanthus Rhizosphere | MKLVRYRSATGEEPGLILDGEIFDLSGSFSSLNPRAPTLDDIKAVAAIPAK |
Ga0207685_103731342 | 3300025905 | Corn, Switchgrass And Miscanthus Rhizosphere | MKLVRYRSATGEEPGLILDGEIFDLSGSFSSLNPRAP |
Ga0207699_105146632 | 3300025906 | Corn, Switchgrass And Miscanthus Rhizosphere | MKLVRYRSTTGEKPGLLLDGEIYDLSAGFAALSHRAPTFEHVE |
Ga0207684_117102042 | 3300025910 | Corn, Switchgrass And Miscanthus Rhizosphere | MKLVRYRSASSEKPGLILDGEVFDLSGSFAALSPRAPTFADIAAISAVPAKALTKAPKESALGPP |
Ga0207695_113231401 | 3300025913 | Corn Rhizosphere | MKLVRYRSASSEKPGLILDGEIFDLSGSFAALNPRAPTLDDIEAIAAVPAKALVKVEKSAVL |
Ga0207652_112294232 | 3300025921 | Corn Rhizosphere | MKLVRYRSSTGEKPGLILDGEVFDLSGSFAALTPRAPTFADIAAISAV |
Ga0207659_103658421 | 3300025926 | Miscanthus Rhizosphere | MKLVRYRSASGEKPGLILDGEIFDLSGSFEALNPRAPTLNDIAAIAAVPAKALIKVAKGAVLGPPLR |
Ga0207644_101394923 | 3300025931 | Switchgrass Rhizosphere | MKLVRYCSSTGEKPGLILDGEVFDLSGSFAALSPRAPTFAD |
Ga0207644_106629791 | 3300025931 | Switchgrass Rhizosphere | MKLVRYRSASGEKPGLFLDGEIFDLSGSFEALNPRAPTLDDIEAIAAVPAKALVKVEKGV |
Ga0207706_102102093 | 3300025933 | Corn Rhizosphere | MKLVRYRSASGEKPGLILDGEIFDLSGSFEALNPRAPTLNDIAA |
Ga0207669_110065392 | 3300025937 | Miscanthus Rhizosphere | MKLVRYCSSTGEKPGLILDGEVFDLSGSFAALSPRAPTFADIAAISAVPAKALTKAPKESALGPPLRGI |
Ga0207691_101274184 | 3300025940 | Miscanthus Rhizosphere | MKLVRYCSSTGEKPGLILDGEVFDLSGSFAALSPRAPTFADIAAISAVPAK |
Ga0207679_121538891 | 3300025945 | Corn Rhizosphere | MKLVRYRSSTGEKPGLILDGEVFDLSGSFAALSPRAPTFADIAA |
Ga0207640_112192252 | 3300025981 | Corn Rhizosphere | MKLVRYRSASGEKPGLILDGEIFDLSGSFEALNPRAPTLNDIA |
Ga0207708_102165891 | 3300026075 | Corn, Switchgrass And Miscanthus Rhizosphere | MKLVRYRSSTGEKPGLILDGEVFDLSGSFAALTPRAPTFADIAAISAVP |
Ga0207641_115282731 | 3300026088 | Switchgrass Rhizosphere | MKLVRYRSASGEKPGLILDGEIFDLSGSFEALNPRAPTLNDI |
Ga0207491_1000872 | 3300026730 | Soil | MKLVRYRSASSEKPGLILDGEIFDLSGSFAALNPRAPTLDDIEAIA |
Ga0207566_1052892 | 3300026773 | Soil | MKLVRYRSASSEKPGLILDGEIFDLSGSFAALNPRAPTLD |
Ga0208893_10051222 | 3300026857 | Soil | MKLVRYRSATGEKPGLILDGEVFDLSAGFAALNHRAP |
Ga0207461_10036302 | 3300026929 | Soil | MKLVRYRSASSEKPGLILDGEIFDLSGSFAALNPRAPTLDDIEAIAAVPAKALVKVEKSAVLGPPLRGI |
Ga0207467_10003791 | 3300027036 | Soil | MKLVRYRSASGEKPGLILDGEIFDLSGSFEALNPRAPTLNDIAAIAAVPAKA |
Ga0207435_1032071 | 3300027390 | Soil | MKLVRYRSASSEKPGLILDGEIFDLSGSFAALNPRAPTLDDIEAIAAVP |
Ga0207464_1001062 | 3300027405 | Soil | MKLVRYRSASGEKPGLILDGEIFDLSGSFEALNPRAPTLDDIEAIAAVPAKALVKVEKGVVL |
Ga0207564_1050142 | 3300027438 | Soil | MKLVRYRSASGEKPGLILDGEIFDLSGSFAALNPRAPTLDDIEAITAVPAKALVKVEK |
Ga0207504_1024992 | 3300027455 | Soil | MKLVRYRSASSEKPGLILDGEIFDLSGSFAALNPRAPTLDDIEAIAAVPAKALVKV |
Ga0209068_109224431 | 3300027894 | Watersheds | MKLVRYRSSTGEKPGLILDGEVFDLSGSFAAPSPRAPTFADIAAISAVPA |
Ga0247750_10107152 | 3300027992 | Soil | MKLVRYRSASGEKPGLILDGEIFDLSGSFEALNPRAPTL |
Ga0247749_10044601 | 3300027993 | Soil | MKLVRYRSASGEKPGLILDGEIFDLSGSFEALNPRAPTLNDIAAIAAVPAKALIKVAKGAVLG |
Ga0307311_101017042 | 3300028716 | Soil | MKLVRYRSTTGETPGLMLDGEVFDLSGSFTALNRRAPTLEDVSAIAAVLMKSLSKVKAGTPL |
Ga0307296_100536961 | 3300028819 | Soil | MKLVRYRSATGEEPGLILDDEVFDLSGSFSALNPREPTLDDI |
Ga0307289_104628332 | 3300028875 | Soil | MKLVRYRSATGEEPGLILDDEVFDLSGSFSALNPRAPTLDDI |
Ga0307304_100683203 | 3300028885 | Soil | MKLVRYRSTTGETPGLMLDGEVFDLSGSFTALNRRAPTLEDVSAIAAVLMKSLS |
Ga0075386_121079791 | 3300030916 | Soil | MKLVRYRSSTGEKPGLILDGEVFDLSGSFAALSPRAPTFADIAAISAVPAK |
Ga0307495_100790601 | 3300031199 | Soil | MKLVRYRSSTGEKPGLILDGEVFDLSGSFAALTPRPPIFADIAAI |
Ga0307497_107459072 | 3300031226 | Soil | MKLVRYRSATGEKPGLILDGEVFDLSAGFAGLNHRAPALDHIAAIAAVPAKTFSKVE |
Ga0310886_101939461 | 3300031562 | Soil | MKLVRYRSATGEEPGLILDGVIFDLSGSFSSLNPRAPRLDDIEAIAAIPAKALSK |
Ga0318515_100277371 | 3300031572 | Soil | MKLVRYRSATGEEPGLILDGEVFDLSGSFSSLNPRAPTLDDIEAIAAVP |
Ga0310904_110133502 | 3300031854 | Soil | MKLVRYRTASGEKPGLILDGEIFDLSGSFAALNPRAPTLDDIEAIA |
Ga0318544_102725452 | 3300031880 | Soil | MKLVRYRSATGEEPGLILDGEVFDLSGSFSSLNPRAPTLDDIEAIAAVPAKALSKAPK |
Ga0310909_109426362 | 3300031947 | Soil | MKLVRYRSATGEKPGLILDSEIFDLSGSFSAIYPRPPTFADIEAIAAVPSKALMKAPK |
Ga0318533_107660561 | 3300032059 | Soil | MKLVRYRSATGEKPGLILDSEIFDLSGSFSAIHPRPPTFADIEAIA |
Ga0310889_101107301 | 3300032179 | Soil | MKLVRYRSATGEEPGLILDGEVFDLSGSFSALNPRAPTFDDVKAIAAIP |
Ga0310810_102211853 | 3300033412 | Soil | MKLVRYRSASGEKPGLFLDGEIFDLSGSFEALNPRAPTLDDIEAIAAVPAKALVK |
Ga0247829_115391871 | 3300033550 | Soil | MKLVRYRSASGEKPGLILDGEIFDLSGSFAALNPRAPTLDDIEAITAV |
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