NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F084700

Metagenome / Metatranscriptome Family F084700

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F084700
Family Type Metagenome / Metatranscriptome
Number of Sequences 112
Average Sequence Length 68 residues
Representative Sequence MTAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDPTAVVVEDSVQRVYDQVNELMKKLAD
Number of Associated Samples 92
Number of Associated Scaffolds 112

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 40.18 %
% of genes near scaffold ends (potentially truncated) 16.96 %
% of genes from short scaffolds (< 2000 bps) 69.64 %
Associated GOLD sequencing projects 83
AlphaFold2 3D model prediction Yes
3D model pTM-score0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(15.179 % of family members)
Environment Ontology (ENVO) Unclassified
(30.357 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(38.393 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 54.35%    β-sheet: 0.00%    Coil/Unstructured: 45.65%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.71
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
a.47.1.1: STATd1uura11uur0.94314
a.47.2.1: t-snare proteinsd1fioa_1fio0.91375
f.5.1.0: automated matchesd5azsa_5azs0.91169
a.183.1.1: Nop domaind2ozbb12ozb0.90721
a.2.7.1: Seryl-tRNA synthetase (SerRS)d1seta11set0.90542

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 112 Family Scaffolds
PF13305TetR_C_33 16.96
PF00440TetR_N 16.07
PF11253DUF3052 14.29
PF04389Peptidase_M28 4.46
PF00005ABC_tran 2.68
PF01869BcrAD_BadFG 1.79
PF16576HlyD_D23 1.79
PF00313CSD 1.79
PF12704MacB_PCD 1.79
PF00072Response_reg 0.89
PF13519VWA_2 0.89
PF04055Radical_SAM 0.89
PF07498Rho_N 0.89
PF00275EPSP_synthase 0.89
PF13602ADH_zinc_N_2 0.89
PF04403PqiA 0.89
PF00854PTR2 0.89
PF09586YfhO 0.89
PF08818DUF1801 0.89
PF03435Sacchrp_dh_NADP 0.89
PF12706Lactamase_B_2 0.89
PF07676PD40 0.89
PF02153PDH_N 0.89
PF12740Chlorophyllase2 0.89
PF13505OMP_b-brl 0.89
PF13669Glyoxalase_4 0.89
PF01425Amidase 0.89
PF12698ABC2_membrane_3 0.89
PF13185GAF_2 0.89

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 112 Family Scaffolds
COG0154Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidaseTranslation, ribosomal structure and biogenesis [J] 0.89
COG0287Prephenate dehydrogenaseAmino acid transport and metabolism [E] 0.89
COG2995Intermembrane transporter PqiABC subunit PqiACell wall/membrane/envelope biogenesis [M] 0.89
COG3104Dipeptide/tripeptide permeaseAmino acid transport and metabolism [E] 0.89
COG4430Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 familyFunction unknown [S] 0.89
COG5646Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)Posttranslational modification, protein turnover, chaperones [O] 0.89
COG5649Uncharacterized conserved protein, DUF1801 domainFunction unknown [S] 0.89

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2162886012|MBSR1b_contig_10387655All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium872Open in IMG/M
2209111000|2209811614All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300000956|JGI10216J12902_103535011All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium586Open in IMG/M
3300000956|JGI10216J12902_115806426All Organisms → cellular organisms → Bacteria1214Open in IMG/M
3300003315|P22013IDBA_10000958All Organisms → cellular organisms → Bacteria19627Open in IMG/M
3300004071|Ga0055486_10102303All Organisms → cellular organisms → Bacteria651Open in IMG/M
3300004157|Ga0062590_101975732All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300004463|Ga0063356_100574080All Organisms → cellular organisms → Bacteria1516Open in IMG/M
3300004463|Ga0063356_105187567All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium559Open in IMG/M
3300005293|Ga0065715_10305885All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1018Open in IMG/M
3300005295|Ga0065707_10095679All Organisms → cellular organisms → Bacteria3346Open in IMG/M
3300005327|Ga0070658_10178382All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1787Open in IMG/M
3300005334|Ga0068869_101010932All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium724Open in IMG/M
3300005340|Ga0070689_100174826All Organisms → cellular organisms → Bacteria1741Open in IMG/M
3300005340|Ga0070689_101506609All Organisms → cellular organisms → Bacteria609Open in IMG/M
3300005343|Ga0070687_100000623All Organisms → cellular organisms → Bacteria11721Open in IMG/M
3300005441|Ga0070700_100872094All Organisms → cellular organisms → Bacteria731Open in IMG/M
3300005545|Ga0070695_101034697All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium669Open in IMG/M
3300005615|Ga0070702_100051208All Organisms → cellular organisms → Bacteria2363Open in IMG/M
3300005836|Ga0074470_10532020All Organisms → cellular organisms → Bacteria52051Open in IMG/M
3300006169|Ga0082029_1111048All Organisms → cellular organisms → Bacteria52869Open in IMG/M
3300006755|Ga0079222_10441613All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium926Open in IMG/M
3300006844|Ga0075428_100260516All Organisms → cellular organisms → Bacteria1867Open in IMG/M
3300006845|Ga0075421_100000365All Organisms → cellular organisms → Bacteria45927Open in IMG/M
3300006845|Ga0075421_100157722All Organisms → cellular organisms → Bacteria2833Open in IMG/M
3300006854|Ga0075425_100003834All Organisms → cellular organisms → Bacteria15373Open in IMG/M
3300006894|Ga0079215_10033561All Organisms → cellular organisms → Bacteria1858Open in IMG/M
3300007004|Ga0079218_10720055All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium941Open in IMG/M
3300007004|Ga0079218_11560860All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium720Open in IMG/M
3300007004|Ga0079218_13617981All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium525Open in IMG/M
3300009087|Ga0105107_10492863All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium854Open in IMG/M
3300009094|Ga0111539_10000033All Organisms → cellular organisms → Bacteria154510Open in IMG/M
3300009100|Ga0075418_10748224All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1055Open in IMG/M
3300009840|Ga0126313_11208316All Organisms → cellular organisms → Bacteria → Acidobacteria623Open in IMG/M
3300010044|Ga0126310_10660148All Organisms → cellular organisms → Bacteria → Acidobacteria787Open in IMG/M
3300010044|Ga0126310_10671444All Organisms → cellular organisms → Bacteria782Open in IMG/M
3300010044|Ga0126310_11489633All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium555Open in IMG/M
3300010045|Ga0126311_10404388All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1051Open in IMG/M
3300010045|Ga0126311_10848580All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium739Open in IMG/M
3300010391|Ga0136847_13625766All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium570Open in IMG/M
3300010399|Ga0134127_12047808All Organisms → cellular organisms → Bacteria651Open in IMG/M
3300011413|Ga0137333_1113401All Organisms → cellular organisms → Bacteria628Open in IMG/M
3300011425|Ga0137441_1046848All Organisms → cellular organisms → Bacteria971Open in IMG/M
3300011427|Ga0137448_1010596All Organisms → cellular organisms → Bacteria1950Open in IMG/M
3300011427|Ga0137448_1109323All Organisms → cellular organisms → Bacteria751Open in IMG/M
3300012041|Ga0137430_1240141All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium517Open in IMG/M
3300014325|Ga0163163_10908495All Organisms → cellular organisms → Bacteria944Open in IMG/M
3300014487|Ga0182000_10057139All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1188Open in IMG/M
3300014745|Ga0157377_10098645All Organisms → cellular organisms → Bacteria1737Open in IMG/M
3300017965|Ga0190266_10545580All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium687Open in IMG/M
3300018422|Ga0190265_10276844All Organisms → cellular organisms → Bacteria → Acidobacteria1738Open in IMG/M
3300018429|Ga0190272_10000002All Organisms → cellular organisms → Bacteria272849Open in IMG/M
3300018432|Ga0190275_10000549All Organisms → cellular organisms → Bacteria32157Open in IMG/M
3300018465|Ga0190269_10026781All Organisms → cellular organisms → Bacteria → Acidobacteria2607Open in IMG/M
3300018466|Ga0190268_10106125All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1320Open in IMG/M
3300018466|Ga0190268_11144818All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium638Open in IMG/M
3300018469|Ga0190270_10000026All Organisms → cellular organisms → Bacteria105045Open in IMG/M
3300018469|Ga0190270_10264983All Organisms → cellular organisms → Bacteria1506Open in IMG/M
3300018469|Ga0190270_11892703All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium653Open in IMG/M
3300018469|Ga0190270_12348947All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300018476|Ga0190274_10500627All Organisms → cellular organisms → Bacteria1214Open in IMG/M
3300018946|Ga0193599_1203396All Organisms → cellular organisms → Bacteria618Open in IMG/M
3300019767|Ga0190267_10301964All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → Myxococcus fulvus830Open in IMG/M
3300020146|Ga0196977_1000038All Organisms → cellular organisms → Bacteria95501Open in IMG/M
3300020147|Ga0196976_1001011All Organisms → cellular organisms → Bacteria14431Open in IMG/M
3300020154|Ga0196965_1061953All Organisms → cellular organisms → Bacteria971Open in IMG/M
3300020202|Ga0196964_10220497All Organisms → cellular organisms → Bacteria882Open in IMG/M
3300020215|Ga0196963_10361078All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium647Open in IMG/M
3300021067|Ga0196978_1015203All Organisms → cellular organisms → Bacteria1426Open in IMG/M
3300021067|Ga0196978_1023109All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1145Open in IMG/M
3300021290|Ga0213902_105838All Organisms → cellular organisms → Bacteria → Acidobacteria570Open in IMG/M
3300021358|Ga0213873_10000001All Organisms → cellular organisms → Bacteria1657979Open in IMG/M
3300021968|Ga0193698_1002460All Organisms → cellular organisms → Bacteria2230Open in IMG/M
3300023062|Ga0247791_1083186All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300024426|Ga0196960_10003754All Organisms → cellular organisms → Bacteria3883Open in IMG/M
3300025324|Ga0209640_10102577All Organisms → cellular organisms → Bacteria2467Open in IMG/M
3300025918|Ga0207662_10001328All Organisms → cellular organisms → Bacteria11926Open in IMG/M
3300025936|Ga0207670_10698153All Organisms → cellular organisms → Bacteria840Open in IMG/M
3300025936|Ga0207670_10964257All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium716Open in IMG/M
3300025936|Ga0207670_11061347All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium683Open in IMG/M
3300025942|Ga0207689_10815605All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium788Open in IMG/M
3300026075|Ga0207708_10531845All Organisms → cellular organisms → Bacteria989Open in IMG/M
3300027075|Ga0214467_1033019All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium588Open in IMG/M
3300027691|Ga0209485_1160844All Organisms → cellular organisms → Bacteria677Open in IMG/M
3300027907|Ga0207428_10000001All Organisms → cellular organisms → Bacteria1034622Open in IMG/M
3300027909|Ga0209382_10000513All Organisms → cellular organisms → Bacteria64059Open in IMG/M
3300027909|Ga0209382_10306620All Organisms → cellular organisms → Bacteria1789Open in IMG/M
3300027992|Ga0247750_1009822All Organisms → cellular organisms → Bacteria856Open in IMG/M
3300028578|Ga0272482_10259418All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium551Open in IMG/M
3300030510|Ga0268243_1037589All Organisms → cellular organisms → Bacteria1018Open in IMG/M
3300030533|Ga0247632_1004181All Organisms → cellular organisms → Bacteria → Acidobacteria810Open in IMG/M
3300031164|Ga0307502_10026606All Organisms → cellular organisms → Bacteria996Open in IMG/M
3300031455|Ga0307505_10000989All Organisms → cellular organisms → Bacteria26016Open in IMG/M
3300031548|Ga0307408_102048962All Organisms → cellular organisms → Bacteria → Acidobacteria551Open in IMG/M
3300031740|Ga0307468_100000986All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales7806Open in IMG/M
3300031911|Ga0307412_11822017All Organisms → cellular organisms → Bacteria → Acidobacteria560Open in IMG/M
3300032002|Ga0307416_100473592All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1311Open in IMG/M
3300032075|Ga0310890_11401428All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium574Open in IMG/M
3300034008|Ga0334942_001701All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Cystobacter → Cystobacter fuscus7772Open in IMG/M
3300034027|Ga0334949_008772All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria3278Open in IMG/M
3300034139|Ga0334956_000155All Organisms → cellular organisms → Bacteria30395Open in IMG/M
3300034139|Ga0334956_050609All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium683Open in IMG/M
3300034145|Ga0334963_000185All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium32500Open in IMG/M
3300034146|Ga0334964_000024All Organisms → cellular organisms → Bacteria158061Open in IMG/M
3300034173|Ga0334925_000009All Organisms → cellular organisms → Bacteria219628Open in IMG/M
3300034194|Ga0370499_0018468All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1601Open in IMG/M
3300034251|Ga0334947_068659All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium725Open in IMG/M
3300034377|Ga0334931_042189All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1004Open in IMG/M
3300034760|Ga0334948_001252All Organisms → cellular organisms → Bacteria9552Open in IMG/M
3300034760|Ga0334948_002269All Organisms → cellular organisms → Bacteria6656Open in IMG/M
3300034779|Ga0334945_024792All Organisms → cellular organisms → Bacteria977Open in IMG/M
3300034781|Ga0334935_000797All Organisms → cellular organisms → Bacteria12299Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil15.18%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere8.04%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil7.14%
Sub-Biocrust SoilEnvironmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil6.25%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere6.25%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil5.36%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil5.36%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil4.46%
BiocrustEnvironmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust4.46%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.57%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere3.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil1.79%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil1.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere1.79%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.79%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.89%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment0.89%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.89%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)0.89%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.89%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.89%
Termite NestEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.89%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.89%
Ore Pile And Mine Drainage Contaminated SoilEnvironmental → Terrestrial → Soil → Unclassified → Mine Drainage → Ore Pile And Mine Drainage Contaminated Soil0.89%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.89%
Hypolithic BiocrustEnvironmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust0.89%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.89%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.89%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2162886012Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
2209111000Soil microbial communities from Colorado Plateau, Greene Butte sample - Dark Crust, Colorado Plateau, Green ButteEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300003315Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P2 sampleEnvironmentalOpen in IMG/M
3300004071Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqB_D2EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005836Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBBEnvironmentalOpen in IMG/M
3300006169Termite nest microbial communities from Madurai, IndiaEnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009087Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010391Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300011413Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT231_2EnvironmentalOpen in IMG/M
3300011425Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT244_2EnvironmentalOpen in IMG/M
3300011427Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT418_2EnvironmentalOpen in IMG/M
3300012041Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT754_2EnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014487Bulk soil microbial communities from Mexico - Magueyal (Ma) metaGEnvironmentalOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018946Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, 0 min after wetting v1EnvironmentalOpen in IMG/M
3300019767Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 TEnvironmentalOpen in IMG/M
3300020146Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_10-13CEnvironmentalOpen in IMG/M
3300020147Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_5-13CEnvironmentalOpen in IMG/M
3300020154Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_20EnvironmentalOpen in IMG/M
3300020202Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10EnvironmentalOpen in IMG/M
3300020215Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_5EnvironmentalOpen in IMG/M
3300021067Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20-13CEnvironmentalOpen in IMG/M
3300021290Switchgrass-associated microbial communities from reclaimed mine lands soil in West Virginia, United States ? Hobet_Cave_2EnvironmentalOpen in IMG/M
3300021358Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3Host-AssociatedOpen in IMG/M
3300021968Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c1EnvironmentalOpen in IMG/M
3300023062Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S081-202R-4EnvironmentalOpen in IMG/M
3300024426Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_5EnvironmentalOpen in IMG/M
3300025324Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027075Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0 HiSeqEnvironmentalOpen in IMG/M
3300027691Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300027992Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S125-311R-5EnvironmentalOpen in IMG/M
3300028578Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0EnvironmentalOpen in IMG/M
3300030510Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)EnvironmentalOpen in IMG/M
3300030533Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bb9 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031164Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 16_SEnvironmentalOpen in IMG/M
3300031455Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_SEnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031911Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1Host-AssociatedOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300034008Biocrust microbial communities from Mojave Desert, California, United States - 38SMCEnvironmentalOpen in IMG/M
3300034027Biocrust microbial communities from Mojave Desert, California, United States - 45SNCEnvironmentalOpen in IMG/M
3300034139Biocrust microbial communities from Mojave Desert, California, United States - 52SNCEnvironmentalOpen in IMG/M
3300034145Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 59SNSEnvironmentalOpen in IMG/M
3300034146Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 60SNSEnvironmentalOpen in IMG/M
3300034173Biocrust microbial communities from Mojave Desert, California, United States - 21HNCEnvironmentalOpen in IMG/M
3300034194Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_17EnvironmentalOpen in IMG/M
3300034251Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 43SMSEnvironmentalOpen in IMG/M
3300034377Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 27HNSEnvironmentalOpen in IMG/M
3300034760Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 44SMSEnvironmentalOpen in IMG/M
3300034779Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 41SMSEnvironmentalOpen in IMG/M
3300034781Biocrust microbial communities from Mojave Desert, California, United States - 31SMCEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
MBSR1b_0826.000043002162886012Miscanthus RhizosphereLVRVNDKLHYEIDATTAVHLPMSERVLDRLADILFATDEILGMLRVPERLPDDTSVTIESSVQSVYDQ
22099162632209111000SoilERVLDKLADILFATDEILDMIRVEERLPDATTVVVEDSVQRVYDQVNELMKKLAD
JGI10216J12902_10353501123300000956SoilMTAVHLPMSERVLDKLADILFATDEILDMIRIGERPPDATTVAVESSVQRVYDQVNELMKKLAD*
JGI10216J12902_11580642613300000956SoilMNKAQIEFDAVNAVYLPMSERVLDKLADILLATDEILDMIRVEERLLDPTSVTVEMSVQKVYDEVNELMKKLVD*
P22013IDBA_10000958173300003315Ore Pile And Mine Drainage Contaminated SoilMTAMHLPMSERVLDRLADILLATDEILGMLRVPERLPDPITAEIETSVREVYDQVNELMKQLSD*
Ga0055486_1010230323300004071Natural And Restored WetlandsFDAMSAVHLPMSERVLDKLADILFATDEILDMIHVEDHLPDDTTAVVEESVQILYNQVNELMKKLSD*
Ga0062590_10197573223300004157SoilLLSRVNDKAAFEMNAMSAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVESSVQGVYDQINELMKKLAD*
Ga0063356_10057408013300004463Arabidopsis Thaliana RhizosphereMTSVHLPMSERVLDKLADILFATDEILDMIRVEERLPDPTTVAVESSVQHVYDQINELMK
Ga0063356_10518756713300004463Arabidopsis Thaliana RhizosphereVNEKITFEIDSTTAVHLPMSERVLDKLADIMLATDEILGMLRTPERVPDSTSVSVESSMQRVYEEVNELMKKLSD*
Ga0065715_1030588513300005293Miscanthus RhizosphereMSERVLDRLADILFATDEILGMLRVPERLPDDTSVTIESSVQSVYDQ
Ga0065707_1009567943300005295Switchgrass RhizosphereVNDKVAIEMDTMSAVYLPMSERVLDKLADILFATDEILDMIRVEERAPDATTVVVESSVQRVYDQINELMKKLAD*
Ga0070658_1017838213300005327Corn RhizosphereMRAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVVVESSVKRVYDQINELMKKLAD*
Ga0068869_10101093223300005334Miscanthus RhizosphereLVRVNDKVPFDFDAMTAVHLPMSERVLDKLADILFATDEILGMIQVEERLPDPTAVVVESSIRSVYEQVNELMKQLSD*
Ga0070689_10017482613300005340Switchgrass RhizosphereMSERVLDRLADILFASDEILDMIRVRERAPDATIVVVEESVQLVYDQVNELMKKLSD*
Ga0070689_10150660913300005340Switchgrass RhizosphereMSAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVENSVQGVYDQINELMKKLAD*
Ga0070687_10000062333300005343Switchgrass RhizosphereVNYKAPIEFDAISAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVVVESSVQRVYDQINDLMKKLAD*
Ga0070700_10087209413300005441Corn, Switchgrass And Miscanthus RhizosphereNRVNDKVAIEMDTMSAVYLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVESSVQGVYDQINELMKKLAY*
Ga0070695_10103469723300005545Corn, Switchgrass And Miscanthus RhizosphereMNAMSAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVESSVQGVYDQINELMKKLAD*
Ga0070702_10005120833300005615Corn, Switchgrass And Miscanthus RhizosphereVNQKVQPFEIDAIHAVHLPMSERVLDRLADILFATDEILDMVRVEERLPDPTAVVVEASMQRVYEQVNELMKQLAD*
Ga0074470_1053202073300005836Sediment (Intertidal)MSAVHLPMSERVLDKLADILFATDEILDMIRTEERLPDDRTVEVEASVQIMYNQVNELMMRLSD*
Ga0082029_1111048133300006169Termite NestMNKAHLEFDAMNAVHLPMSERVLDKLADILFATDEILDMIRVEERLLDPTTVVVEDSVQKVYDQVNELMKRLVD*
Ga0079222_1044161313300006755Agricultural SoilMTAVYLPMSERVLDKLADILFATDEILDMIRVEERIPDPTTAFVDRSVRAVYDQINELMKKLAD*
Ga0075428_10026051623300006844Populus RhizosphereVNYKASIEIDPVTALHLPMSERVLDKLADILFATDELLDMIRVEERLPDPTTVVVEDSVQRVYDQINELMKKLSD*
Ga0075421_100000365283300006845Populus RhizosphereMSERVLDKLADILFATDEILGLIRVEERMPDATTVFIETSVQSVYDQVNELMKRLAD*
Ga0075421_10015772223300006845Populus RhizosphereVNYKASIEFDPVTALHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTEVVEASVQHVYDQINELMKKLSD*
Ga0075425_100003834103300006854Populus RhizosphereVSYKLAEIDVMHAVHLPVSERVLDKLADILFATDEILDMLHVDEHMPDDTTVEVEQSVRVVYDQVNELMKKLCD*
Ga0079215_1003356123300006894Agricultural SoilMNKAPIEFDAVDAVYLPMSERVLDKLADILLATDEILDMIRVEERLLDPTSVTVETSVQKVYDEVNELMQKLVD*
Ga0079218_1072005523300007004Agricultural SoilVNQKAYIEIDTTTAVHLPMSERVLDKLADILFATDEILGLIRVEERMPDATTVFIESSVQIVYDQVNELMKRLAD*
Ga0079218_1156086023300007004Agricultural SoilMDKLADILFATDEILDMIRVEERLPDATTVTVERSVQSVYDQINELMKKLAD*
Ga0079218_1361798113300007004Agricultural SoilMSAVHLPMSERVLDKLADIIFASDEILDMIRMEERLPDPTTVVVEASVKNVYDQINELMKKLAD*
Ga0105107_1049286333300009087Freshwater SedimentMSVHKSLLCRVNYKAPIEIDTTTAVHLPTSERVLDKLADILFATDEILGMVRMEERLPDATTVFIEESVQSVYNQVNELMKRLAD*
Ga0111539_10000033483300009094Populus RhizosphereMDAMSAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVENSVQGVYDQINELMKKLAD*
Ga0075418_1074822423300009100Populus RhizosphereLVRVNDKLHYEIDATTAVHLPMSERVLDRLADILFATDEILGMLRVPERLPDDTSVTIESSVQRVYDQVNELMKKLSD*
Ga0126313_1120831623300009840Serpentine SoilVNYKAHIEIDAMTAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDPTAMVVGDSVQRVY
Ga0126310_1066014823300010044Serpentine SoilVNVKLQEFDVMTAVQLPISERVLDRLADILFATDEILDLLDRDEGFPIDTTVDVEKSVRDVYDQVNELMKKLAD*
Ga0126310_1067144413300010044Serpentine SoilRLADILFATDEILDLLDRDEGFPIDTTVDVEKSVRDVYDQVNELMKKLAD*
Ga0126310_1148963313300010044Serpentine SoilDATTAVHLPMSERVLDKLADILFATDEILGMLKIPERLPDSTSVVIESSVQSIYEQVNELMKKLSD*
Ga0126311_1040438823300010045Serpentine SoilMTAVHLPMSERVLDKLADILFATDEILDMIRVEDRLPDPTAVVVEDSVQRVYDQINELMKKLVD*
Ga0126311_1084858023300010045Serpentine SoilVNQKATIEFDAMNAVHLPMSERVLDKLADILFATDEILDMIRVEERLLDPTTVVVEERVQQVYDQVNELMKRL
Ga0136847_1362576623300010391Freshwater SedimentVIVKLQEFDVMTAIQLPISERVLDRLADILFATDEILDMIDRDERSPSDTTLDVEKSVREVYDQVNELMKKLAD*
Ga0134127_1204780813300010399Terrestrial SoilVNDKAAFEMNAMSAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVESSVQGVYDQINELMKKLAD*
Ga0137333_111340123300011413SoilVNQKAYIEIDTTTAVHLPMSERVLDKLADILFATDEILGLIRVEERMPDATTVFVEESVQSVYDQVNELMKRLAD*
Ga0137441_104684823300011425SoilMSERVLDKLADILFATDEILDMIRVEERLPDPTTVAVESSVQGVYDQINELMKKLAD*
Ga0137448_101059633300011427SoilVNQKVQLFEIDAMHAIHLPMSERVLDKLADILFATDEILDMVRVEERLPDPTSVTVETSMQRVYEQVNELMKQLAD*
Ga0137448_110932313300011427SoilMDAMSAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVESSVQGVYDQINELMKKLAD*
Ga0137430_124014113300012041SoilVNYKAAFEMDAMSAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVESSVQGVYDQINELMKKLAD*
Ga0163163_1090849523300014325Switchgrass RhizosphereVNYKALAFDPITAVHLPVSERVLDKLADILFATDEILDMLKTDERYLNETTVAVGESVRSVYDQVNDLMKQLSD*
Ga0182000_1005713923300014487SoilVTYKAAIEFDAMTAVHLPMSERVLDKLADILFATDEILDIIRVEQRLPDETAVVVEKSVQSVYDQINALMKRLSD*
Ga0157377_1009864533300014745Miscanthus RhizosphereVNYKALTEIDAMTAVYLPMSERVLDKLADILFATDEILDMIRVEEQLPDPTAVVVGDSVQRVYDQINELMKKLAD*
Ga0190266_1054558023300017965SoilMRAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDPTAVTVGKSVQSVYDQINELMKKLAD
Ga0190265_1027684433300018422SoilMSAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVESSVQSVYDQINDLMKKLAD
Ga0190272_10000002473300018429SoilVNEKVSYEIDATTAIHLPMSERVLDKLADILFATDEILGMVRPDEERMPDPSMASIETSMQSVYDQVNELMKRLSD
Ga0190275_10000549263300018432SoilMSAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDPTTVVVEASVRHVYDQINELMKKLVD
Ga0190269_1002678133300018465SoilMTAVHLPMSERVLDKLADILFATDEILDMIKVEERMPDPTAVVVEDSVRSVYDQINELMKKLAD
Ga0190268_1010612523300018466SoilVNDKVPYEFDVTTAIHLPMSERVLDKLADILYATDEILGMVQTPERLPDASMTSVEMSMQRVYEQVNELMKQLSD
Ga0190268_1114481823300018466SoilMTAVHLPMSERVLDKLADILFATDELLDMIRVEERLPDATTEVVEASVQSVYDQINELMK
Ga0190270_10000026873300018469SoilMTAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDPTTVVVEDSVQRVYDQINELMKKLVD
Ga0190270_1026498323300018469SoilMRAVHLPMSERVLDKLADILFATDEILDMIRVEERMPDATAVVVESSVQNVYDQINELMKKLAD
Ga0190270_1189270313300018469SoilMSAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVECSVQGVYDQINELMKKLAD
Ga0190270_1234894713300018469SoilRVNDKALYEIDATTAIHLPMSERVLDKLADILFATDEILGMLRVPERLPDSTSVTIESSMQSVYDEVNELMKKLSD
Ga0190274_1050062723300018476SoilMDAMSAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVESSVQSVYDQINELMKKLAD
Ga0193599_120339613300018946SoilTTALHLPVSERVLDKLADILLASDDILGMIRNEERLPDPTVAAVEDSVQHVYNQINELMKQLVD
Ga0190267_1030196423300019767SoilLRVGTSGYKSLLCRVNDKVPYEVDVTTAIHLPMSERVLDKLADILYATDEILGMVQTPERLPDASMTSVEMSMQRVYEQVNELMKQLSD
Ga0196977_100003873300020146SoilMTAVHLPMSERVLDKLADILFATDEILDMIRIGERPPDATTVVVESSVQRVYDQVNELMKKLAD
Ga0196976_100101133300020147SoilMSERVLDKLADILFATDEILGMLRVPERLPDSTSVVIEASVQSVYDEVNELMKKLSD
Ga0196965_106195323300020154SoilMTAVHLPMSERVLDKLADILFATDEILDMIKIEERLPDATTVVVEASVKSVYDQVNELMKKLAD
Ga0196964_1022049723300020202SoilVNHKAFTEIDTTTAVHLPTSERVLDKLADILFATDEILGMVRMEERMPDATTVFIEESVQSVYDQVNELMKRLSD
Ga0196963_1036107823300020215SoilVNQKAQIEIDTTTAVHLPTSERVLDKLADILFATDEILGIVRVEERMPDATTVFIEEAVQSVYDQVNELMKRLSD
Ga0196978_101520323300021067SoilVNDKVPFEIDATTAVHLPMSERVLDKLADILFATDEILGMLRVPERLPDSTSVVIEASVQSVYDEVNELMKKLSD
Ga0196978_102310913300021067SoilRVLDKLADILFATDEILDMIRVEERLPDPTTVAVETSVQRLYDQVNELMKKLAD
Ga0213902_10583813300021290SoilVKLQEFDVMTAVQLPISERVLDRLADILFATDEILDMLDRDEGYPIDTTVDVGKSVRNVYDQVNELMKKLAD
Ga0213873_1000000111183300021358RhizosphereMSERVLDKLADILFATDEILDMLHVDEDRVPDDTSVVVEASVKHVYDQVNELMKKLTD
Ga0193698_100246023300021968SoilMHTMSAVYLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVESSVQSVYDQINELMKKLAD
Ga0247791_108318613300023062SoilIDAMTAVHLPMSERVLDKLADILFATDEILDMIRVEEQLPDPTAQVVGASVQQVYDQINELMKKLAD
Ga0196960_1000375433300024426SoilMTAVHLPMSERVLDKLADILFATDEILDMIRVEDRLPDPTAMAVGDSVQQVYDQINELMKKLAD
Ga0209640_1010257723300025324SoilMQAIHLPMSERVLDKLADILFATDEILDMVRVEERLPDPTSVVVETSMQRVYEQVNELMKQLAD
Ga0207662_10001328123300025918Switchgrass RhizosphereMSERVLDKLADILFATDEILDMIRVEERLPDATTVVVESSVQRVYDQINDLMKKLAD
Ga0207670_1069815323300025936Switchgrass RhizosphereMSERVLDRLADILFASDEILDMIRVRERAPDATIVVVEESVQLVYDQVNELMKKLSD
Ga0207670_1096425713300025936Switchgrass RhizosphereVNDKVPFDFDAMTAVHLPMSERVLDKLADILFATDEILGMIRVEEKLPDPTTVAVESSMQSVYEQVNELMKQLSD
Ga0207670_1106134713300025936Switchgrass RhizosphereMRAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVVVESSVKRVYDQINELMKKLAD
Ga0207689_1081560513300025942Miscanthus RhizosphereMSERVLDKLADILFATDEILGMIQVEERLPDPTAVVVESSIRSVYEQVNELMKQLSD
Ga0207708_1053184513300026075Corn, Switchgrass And Miscanthus RhizosphereNRVNDKVAIEMDTMSAVYLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVADESSVQGVYDQINELMKKLAD
Ga0214467_103301913300027075SoilVNYKAPIEIDAMSAVHLPMSERVLDKLADILFATDEILDMIRVEERPPDATAAVVQGAVQNVYDQVNELMKKLAD
Ga0209485_116084423300027691Agricultural SoilMNKAPIEFDAVDAVYLPMSERVLDKLADILLATDEILDMIRVEERLLDPTSVTVETSVQKVYDEVNELMQKLVD
Ga0207428_100000011043300027907Populus RhizosphereMSAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVENSVQGVYDQINELMKKLAD
Ga0209382_10000513573300027909Populus RhizosphereMSERVLDKLADILFATDEILGLIRVEERMPDATTVFIETSVQSVYDQVNELMKRLAD
Ga0209382_1030662013300027909Populus RhizosphereVNYKASIEFDPVTALHLPMSERVLDKLADILFATDEILDMIRVEERLPDATTEVVEASVQHVYDQINELMKKLSD
Ga0247750_100982223300027992SoilMTAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDPTAAVVGDSVQRVYDQINELMKKLAD
Ga0272482_1025941823300028578SoilMSAVHLPMSERVLDKLADILFATDEILDMIRVEDRLLDPTTVVVEESVQAVYDQVNELMKKLVD
Ga0268243_103758923300030510SoilMTAVHLPMSERVLDKLADILFATDEILDIIRVEQRLPDETAVVVEKSVQSVYDQINALMKRLSD
Ga0247632_100418123300030533SoilMNKAPIEFDAMSAVHLPISERVLDKLADILFATDEILDMIRVEERVLDHTSVVVETSVQKVYDQVNELMKRLVD
Ga0307502_1002660623300031164SoilMRAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDPTAVTVASSVQSVYDQINELMKKLAD
Ga0307505_1000098963300031455SoilMTAVHIPMSERVLDKLADILYATDELLSLVRVEERLPDSTTRVVEQSMQRVYEQINELMKRFSD
Ga0307408_10204896223300031548RhizosphereMNKALLEFDAMNAVHLPMSERVLDKLADILFATDEILDMIRVEERLFDPTTVVVESSVQQVYDQVNELMKKLVD
Ga0307468_10000098683300031740Hardwood Forest SoilVKPQEFDAMTAIQLPISERVLDRLADILFATDEILDMINRNERVPDDTTLDVEQSVRMVYDQVNELMKKLAD
Ga0307412_1182201723300031911RhizosphereMNAAHLPMSERVLDKLADILFATDEILDMIRVEERLLDPTTVVVEESVQQVYDQVNELMKKLVD
Ga0307416_10047359223300032002RhizosphereMTAVHLPMSERVLDKLADILFATDEILGLVCPEERMPDETAVVVEESMRRVYDQINDLMKRLSD
Ga0310890_1140142823300032075SoilLSRVNAKAAIEFDAMSAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDATAVVVESSVQNVYDQINELMKKLAD
Ga0334942_001701_4611_48413300034008BiocrustVNDKVPYEIDATTAIHLPMSERVLDRLADILLATDEILGMVRPDEERMPDPSMATVETSIQSVYDQVNELMKQLSD
Ga0334949_008772_1095_12683300034027BiocrustMSERVLDKLADILFATDEILDMIRVEERLPDATTVVVEDSVQRVYDQINELMKKLAD
Ga0334956_000155_16526_167503300034139BiocrustVHKTILQFDPMTAIQLPLSERVLDRLADILFATDEILDMIHMDEVLPDSTTQEVEASVRHVYDRVNELMKKLAD
Ga0334956_050609_172_3663300034139BiocrustMTAVHLPMSERVLDKLADILFATDEILDMIRVEERAPDPTTVVVEDSVQRVYDQINELMKKLAD
Ga0334963_000185_25666_258603300034145Sub-Biocrust SoilMTAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDPTAVVVEDSVQRVYDQVNELMKKLAD
Ga0334964_000024_53777_539983300034146Sub-Biocrust SoilVKYQALEFDAMTAVHLPMSERVLDKLADILFATDEILDMLQMEEQLPSPASSVEESVRSVYDQVNELMKQLAD
Ga0334925_000009_58647_588683300034173Hypolithic BiocrustMKALEFDAMTAVHLPMSERVLDKLADILFATDEILDMLRLQEERLPDDTTTAVEESVKHVYEQVNELMKKLTD
Ga0370499_0018468_1053_12263300034194Untreated Peat SoilMSERVLDKLADILFATDEILDMIRVEERLPDATTVAVESSVQGVYDQINELMKKLAD
Ga0334947_068659_281_4753300034251Sub-Biocrust SoilMNAVHLPLSERVLDRLADILFASDEILDMIQTVDRFPDDTTQDVQRSVRGVYDQVNELMKKLAD
Ga0334931_042189_65_2833300034377Sub-Biocrust SoilMAATEIDAMTAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDRTAVVVQDSVKRVYDQVNELMKKLAD
Ga0334948_001252_4707_49343300034760Sub-Biocrust SoilVKEQIPFEIDATTAIHLPMSERVLDKLADILFATDEILGMLRVPERLPDATSVTIEMSVQSVYNEVNELMKKLSD
Ga0334948_002269_1101_12953300034760Sub-Biocrust SoilMTAVHLPMSERVLDKLADILFATDEILDMIRVEDRLPDATAVVVGDSVQRVYDQINELMKKLAD
Ga0334945_024792_293_5113300034779Sub-Biocrust SoilMAATEIDAMTAVHLPMSERVLDKLADILFATDEILDMIRVEERLPDRTAVVVHDSVKRVYDQVNELMKKLAD
Ga0334935_000797_2560_27843300034781BiocrustVNYKSLETDVMTAVHLPMSERVLDKLADILFATDEILDMIKVEDRLPDPTAVVVGDSVRHVYEQINELMKKLAD

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.