Metagenome / Metatranscriptome Family F084715

Basic Information
Family ID	F084715
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	46 residues
Representative Sequence	TKVIPIIASIIFIFELEVKRPTAHVNITRDITLGFINKYKDLI
Number of Associated Samples	87
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	2.73 %
% of genes near scaffold ends (potentially truncated)	93.75 %
% of genes from short scaffolds (< 2000 bps)	91.96 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Most Common Taxonomy
Group	Unclassified (78.571 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (43.750 % of family members)
Environment Ontology (ENVO)	Unclassified (83.036 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (80.357 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.30% β-sheet: 0.00% Coil/Unstructured: 50.70%
Feature Viewer

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Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF03626	COX4_pro	38.39
PF00510	COX3	13.39
PF01040	UbiA	9.82
PF00115	COX1	3.57
PF14821	Thr_synth_N	0.89
PF04442	CtaG_Cox11	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG3125	Heme/copper-type cytochrome/quinol oxidase, subunit 4	Energy production and conversion [C]	38.39
COG1845	Heme/copper-type cytochrome/quinol oxidase, subunit 3	Energy production and conversion [C]	13.39
COG3175	Cytochrome c oxidase assembly protein Cox11	Posttranslational modification, protein turnover, chaperones [O]	0.89

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.57 %
All Organisms	root	All Organisms	21.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.57 %
cellular organisms	root	All Organisms → cellular organisms	21.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.57 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	21.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	20.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.57 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	19.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.57 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	10.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.57 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	10.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.57 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	10.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.57 %
unclassified Candidatus Pelagibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter	9.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.57 %
Candidatus Pelagibacter sp. IMCC9063	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. IMCC9063	9.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000148\|SI47jul10_100mDRAFT_c1029978	Not Available	810	Open in IMG/M
3300000259\|LP_J_08_P26_500DRAFT_1049791	Not Available	536	Open in IMG/M
3300000966\|JGI12025J13092_106326	Not Available	544	Open in IMG/M
3300001683\|GBIDBA_10089444	Not Available	992	Open in IMG/M
3300005402\|Ga0066855_10064888	Not Available	1120	Open in IMG/M
3300005427\|Ga0066851_10153474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	734	Open in IMG/M
3300005427\|Ga0066851_10233732	Not Available	574	Open in IMG/M
3300005605\|Ga0066850_10148368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	865	Open in IMG/M
3300005953\|Ga0066383_10120120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	787	Open in IMG/M
3300006013\|Ga0066382_10202156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	687	Open in IMG/M
3300006076\|Ga0081592_1141677	Not Available	874	Open in IMG/M
3300006166\|Ga0066836_10061287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. IMCC9063	2146	Open in IMG/M
3300006166\|Ga0066836_10222093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1124	Open in IMG/M
3300006166\|Ga0066836_10892323	Not Available	537	Open in IMG/M
3300006306\|Ga0068469_1235381	Not Available	584	Open in IMG/M
3300006308\|Ga0068470_1319572	Not Available	929	Open in IMG/M
3300006308\|Ga0068470_1451011	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300006311\|Ga0068478_1140882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. IMCC9063	3361	Open in IMG/M
3300006313\|Ga0068472_10404592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. IMCC9063	1766	Open in IMG/M
3300006335\|Ga0068480_1376474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	724	Open in IMG/M
3300006336\|Ga0068502_1789911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1258	Open in IMG/M
3300006347\|Ga0099697_1297433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	695	Open in IMG/M
3300006414\|Ga0099957_1281644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1154	Open in IMG/M
3300006567\|Ga0099958_1168247	Not Available	1433	Open in IMG/M
3300006902\|Ga0066372_10960555	Not Available	521	Open in IMG/M
3300007283\|Ga0066366_10141854	Not Available	955	Open in IMG/M
3300007513\|Ga0105019_1241035	Not Available	841	Open in IMG/M
3300007558\|Ga0102822_1026097	All Organisms → cellular organisms → Bacteria → Proteobacteria	1401	Open in IMG/M
3300007760\|Ga0105018_1114242	Not Available	946	Open in IMG/M
3300008249\|Ga0105353_1128088	Not Available	601	Open in IMG/M
3300008627\|Ga0115656_1067714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. IMCC9063	1813	Open in IMG/M
3300008738\|Ga0115660_1085063	Not Available	1583	Open in IMG/M
3300009049\|Ga0102911_1075690	Not Available	971	Open in IMG/M
3300009104\|Ga0117902_1292542	Not Available	1515	Open in IMG/M
3300009130\|Ga0118729_1147670	Not Available	1062	Open in IMG/M
3300009172\|Ga0114995_10649821	Not Available	576	Open in IMG/M
3300009172\|Ga0114995_10753892	Not Available	533	Open in IMG/M
3300009173\|Ga0114996_10916705	Not Available	627	Open in IMG/M
3300009409\|Ga0114993_10412300	Not Available	1014	Open in IMG/M
3300009409\|Ga0114993_10500050	Not Available	903	Open in IMG/M
3300009409\|Ga0114993_10930045	Not Available	621	Open in IMG/M
3300009409\|Ga0114993_11015359	Not Available	590	Open in IMG/M
3300009420\|Ga0114994_10684778	Not Available	669	Open in IMG/M
3300009420\|Ga0114994_10791256	Not Available	616	Open in IMG/M
3300009420\|Ga0114994_11019278	Not Available	535	Open in IMG/M
3300009420\|Ga0114994_11102269	Not Available	512	Open in IMG/M
3300009420\|Ga0114994_11102880	Not Available	512	Open in IMG/M
3300009425\|Ga0114997_10336813	Not Available	827	Open in IMG/M
3300009425\|Ga0114997_10564771	Not Available	602	Open in IMG/M
3300009432\|Ga0115005_10562663	Not Available	911	Open in IMG/M
3300009432\|Ga0115005_11437007	Not Available	564	Open in IMG/M
3300009472\|Ga0115554_1237570	Not Available	731	Open in IMG/M
3300009512\|Ga0115003_10142407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1458	Open in IMG/M
3300009512\|Ga0115003_10411201	Not Available	795	Open in IMG/M
3300009512\|Ga0115003_10736839	Not Available	573	Open in IMG/M
3300009526\|Ga0115004_10067599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2240	Open in IMG/M
3300009526\|Ga0115004_10285051	Not Available	981	Open in IMG/M
3300009705\|Ga0115000_10116655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. IMCC9063	1791	Open in IMG/M
3300009706\|Ga0115002_10101742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. IMCC9063	2348	Open in IMG/M
3300009706\|Ga0115002_10789554	Not Available	664	Open in IMG/M
3300009706\|Ga0115002_10985951	Not Available	579	Open in IMG/M
3300009785\|Ga0115001_10816302	Not Available	562	Open in IMG/M
3300009785\|Ga0115001_10960365	Not Available	512	Open in IMG/M
3300009790\|Ga0115012_11404973	Not Available	596	Open in IMG/M
3300010883\|Ga0133547_12146111	Not Available	1016	Open in IMG/M
3300012950\|Ga0163108_10093840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. IMCC9063	1909	Open in IMG/M
3300017768\|Ga0187220_1119192	Not Available	798	Open in IMG/M
3300020322\|Ga0211563_1114899	Not Available	546	Open in IMG/M
3300020332\|Ga0211502_1088887	Not Available	584	Open in IMG/M
3300020353\|Ga0211613_1118155	Not Available	627	Open in IMG/M
3300020376\|Ga0211682_10368185	Not Available	528	Open in IMG/M
3300020412\|Ga0211552_10184939	Not Available	740	Open in IMG/M
3300020413\|Ga0211516_10281120	Not Available	750	Open in IMG/M
3300020426\|Ga0211536_10406959	Not Available	530	Open in IMG/M
3300020466\|Ga0211714_10554727	Not Available	539	Open in IMG/M
3300021065\|Ga0206686_1126871	Not Available	755	Open in IMG/M
3300021352\|Ga0206680_10187458	Not Available	802	Open in IMG/M
3300021791\|Ga0226832_10439796	Not Available	554	Open in IMG/M
3300025195\|Ga0208062_104312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. IMCC9063	1735	Open in IMG/M
3300025200\|Ga0208569_1005089	Not Available	1244	Open in IMG/M
3300026080\|Ga0207963_1053589	Not Available	1032	Open in IMG/M
3300026253\|Ga0208879_1197412	Not Available	782	Open in IMG/M
3300026260\|Ga0208408_1108235	Not Available	816	Open in IMG/M
3300026321\|Ga0208764_10106810	Not Available	1442	Open in IMG/M
3300027755\|Ga0209034_10022653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. IMCC9063	2422	Open in IMG/M
3300027788\|Ga0209711_10046257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. IMCC9063	2429	Open in IMG/M
3300027844\|Ga0209501_10772815	Not Available	508	Open in IMG/M
3300027847\|Ga0209402_10100338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. IMCC9063	2002	Open in IMG/M
3300028192\|Ga0257107_1185740	Not Available	596	Open in IMG/M
3300028487\|Ga0257109_1038337	Not Available	1567	Open in IMG/M
3300028487\|Ga0257109_1159615	Not Available	656	Open in IMG/M
3300031542\|Ga0308149_1049490	Not Available	529	Open in IMG/M
3300031775\|Ga0315326_10790478	Not Available	591	Open in IMG/M
3300031801\|Ga0310121_10746497	Not Available	515	Open in IMG/M
3300031802\|Ga0310123_10294383	Not Available	1068	Open in IMG/M
3300031802\|Ga0310123_10916659	Not Available	514	Open in IMG/M
3300031803\|Ga0310120_10249660	Not Available	953	Open in IMG/M
3300031804\|Ga0310124_10293707	Not Available	984	Open in IMG/M
3300031811\|Ga0310125_10111600	Not Available	1436	Open in IMG/M
3300031886\|Ga0315318_10591038	Not Available	629	Open in IMG/M
3300032006\|Ga0310344_10404232	Not Available	1172	Open in IMG/M
3300032006\|Ga0310344_10506844	Not Available	1035	Open in IMG/M
3300032006\|Ga0310344_11095056	Not Available	665	Open in IMG/M
3300032011\|Ga0315316_11038865	Not Available	665	Open in IMG/M
3300032032\|Ga0315327_10538842	Not Available	723	Open in IMG/M
3300032088\|Ga0315321_10178296	Not Available	1408	Open in IMG/M
3300032278\|Ga0310345_10373004	Not Available	1339	Open in IMG/M
3300032360\|Ga0315334_10923132	Not Available	756	Open in IMG/M
3300032360\|Ga0315334_11808458	Not Available	518	Open in IMG/M
3300034695\|Ga0372840_216127	Not Available	568	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	69.64%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	10.71%
Unclassified	Environmental → Aquatic → Marine → Unclassified	8.93%
Coastal	Environmental → Aquatic → Marine → Coastal	6.25%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	2.68%
Pelagic	Environmental → Aquatic → Marine → Pelagic	0.89%
Strait	Environmental → Aquatic → Marine → Strait	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	58.93%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	8.93%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	8.93%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	6.25%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	6.25%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	4.46%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.79%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	1.79%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	43.75%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	8.04%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	8.04%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	8.04%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	6.25%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	6.25%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	4.46%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	3.57%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	2.68%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.79%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	0.89%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.89%
Methane Seep Mesocosm	Environmental → Aquatic → Marine → Unclassified → Unclassified → Methane Seep Mesocosm	0.89%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	0.89%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	0.89%
Diffuse Hydrothermal Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Fluids	0.89%
Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume	0.89%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000148	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 47 07/07/10 100m	Environmental	Open in IMG/M
3300000259	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_J_08_P26_500	Environmental	Open in IMG/M
3300000966	Marine microbial communities from the Deep Atlantic Ocean - MP0145	Environmental	Open in IMG/M
3300001683	Hydrothermal vent plume microbial communities from Guaymas Basin, Gulf of California - IDBA assembly	Environmental	Open in IMG/M
3300005402	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV73	Environmental	Open in IMG/M
3300005427	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65	Environmental	Open in IMG/M
3300005605	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67	Environmental	Open in IMG/M
3300005953	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_Bottom_ad_3770_LV_A	Environmental	Open in IMG/M
3300006013	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_NADW_ad_2500m_LV_B	Environmental	Open in IMG/M
3300006076	Microbial communities in diffuse hydrothermal fluids of Manus Basin, Bismarck Sea ? fluid A	Environmental	Open in IMG/M
3300006166	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91	Environmental	Open in IMG/M
3300006306	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_0500m	Environmental	Open in IMG/M
3300006308	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500m	Environmental	Open in IMG/M
3300006311	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_1000m	Environmental	Open in IMG/M
3300006313	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0770m	Environmental	Open in IMG/M
3300006335	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_2_0500m	Environmental	Open in IMG/M
3300006336	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0500m	Environmental	Open in IMG/M
3300006347	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_1000m	Environmental	Open in IMG/M
3300006414	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0500m	Environmental	Open in IMG/M
3300006567	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0770m	Environmental	Open in IMG/M
3300006902	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_A	Environmental	Open in IMG/M
3300007283	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_250_ad_252m_LV_B	Environmental	Open in IMG/M
3300007513	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 250-2.7um, replicate b	Environmental	Open in IMG/M
3300007558	Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.733	Environmental	Open in IMG/M
3300007760	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 250-2.7um, replicate a	Environmental	Open in IMG/M
3300008249	Methane-oxidizing microbial communities from mesocosms in the Hudson Canyon - EN10B Hudson Canyon	Environmental	Open in IMG/M
3300008627	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 247m, 2.7-0.2um	Environmental	Open in IMG/M
3300008738	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 200m, 2.7-0.2um, replicate b	Environmental	Open in IMG/M
3300009049	Estuarine microbial communities from the Columbia River estuary - metaG 1558A-02	Environmental	Open in IMG/M
3300009104	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um	Environmental	Open in IMG/M
3300009109	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 234m, 2.7-0.2um, replicate b	Environmental	Open in IMG/M
3300009130	Combined Assembly of Gp0139511, Gp0139512	Environmental	Open in IMG/M
3300009172	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154	Environmental	Open in IMG/M
3300009173	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134	Environmental	Open in IMG/M
3300009409	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150	Environmental	Open in IMG/M
3300009420	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152	Environmental	Open in IMG/M
3300009425	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136	Environmental	Open in IMG/M
3300009432	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M Metagenome	Environmental	Open in IMG/M
3300009472	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404	Environmental	Open in IMG/M
3300009512	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88	Environmental	Open in IMG/M
3300009526	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90	Environmental	Open in IMG/M
3300009705	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128	Environmental	Open in IMG/M
3300009706	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86	Environmental	Open in IMG/M
3300009785	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130	Environmental	Open in IMG/M
3300009790	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome	Environmental	Open in IMG/M
3300010883	western Arctic Ocean co-assembly	Environmental	Open in IMG/M
3300012950	Marine microbial communities from the Central Pacific Ocean - Fk160115 155m metaG	Environmental	Open in IMG/M
3300017768	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)	Environmental	Open in IMG/M
3300020322	Marine microbial communities from Tara Oceans - TARA_B100002003 (ERX556138-ERR599051)	Environmental	Open in IMG/M
3300020332	Marine microbial communities from Tara Oceans - TARA_B100000029 (ERX555956-ERR598975)	Environmental	Open in IMG/M
3300020353	Marine microbial communities from Tara Oceans - TARA_B100000686 (ERX556093-ERR598998)	Environmental	Open in IMG/M
3300020376	Marine microbial communities from Tara Oceans - TARA_B100000795 (ERX555997-ERR599121)	Environmental	Open in IMG/M
3300020384	Marine microbial communities from Tara Oceans - TARA_B000000441 (ERX556023-ERR599110)	Environmental	Open in IMG/M
3300020412	Marine microbial communities from Tara Oceans - TARA_B100001167 (ERX556053-ERR599047)	Environmental	Open in IMG/M
3300020413	Marine microbial communities from Tara Oceans - TARA_S200000501 (ERX555962-ERR599092)	Environmental	Open in IMG/M
3300020426	Marine microbial communities from Tara Oceans - TARA_B100000378 (ERX555992-ERR599112)	Environmental	Open in IMG/M
3300020466	Marine microbial communities from Tara Oceans - TARA_B100001540 (ERX556059-ERR598968)	Environmental	Open in IMG/M
3300021065	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 500m 12015	Environmental	Open in IMG/M
3300021352	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 150m 12015	Environmental	Open in IMG/M
3300021791	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmer	Environmental	Open in IMG/M
3300025195	Marine microbial communities from the Deep Atlantic Ocean - MP0261 (SPAdes)	Environmental	Open in IMG/M
3300025200	Marine microbial communities from South of Eden, South Pacific Ocean - MP1434 (SPAdes)	Environmental	Open in IMG/M
3300026080	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_NADW_ad_2500m_LV_A (SPAdes)	Environmental	Open in IMG/M
3300026253	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_A (SPAdes)	Environmental	Open in IMG/M
3300026260	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67 (SPAdes)	Environmental	Open in IMG/M
3300026321	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91 (SPAdes)	Environmental	Open in IMG/M
3300027755	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - 250m_A/KNORR_S2/LV (SPAdes)	Environmental	Open in IMG/M
3300027788	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88 (SPAdes)	Environmental	Open in IMG/M
3300027844	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134 (SPAdes)	Environmental	Open in IMG/M
3300027847	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126 (SPAdes)	Environmental	Open in IMG/M
3300028192	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_500m	Environmental	Open in IMG/M
3300028487	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_2000m	Environmental	Open in IMG/M
3300031542	Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CBN3_331_5m (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031775	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315	Environmental	Open in IMG/M
3300031801	Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986	Environmental	Open in IMG/M
3300031802	Marine microbial communities from Western Arctic Ocean, Canada - CB6_AW_1057	Environmental	Open in IMG/M
3300031803	Marine microbial communities from Western Arctic Ocean, Canada - CB27_AW_983	Environmental	Open in IMG/M
3300031804	Marine microbial communities from Western Arctic Ocean, Canada - CB11b_AW_Bot5	Environmental	Open in IMG/M
3300031811	Marine microbial communities from Western Arctic Ocean, Canada - CB11b_Tmax_Bot8	Environmental	Open in IMG/M
3300031886	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416	Environmental	Open in IMG/M
3300032006	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MG	Environmental	Open in IMG/M
3300032011	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416	Environmental	Open in IMG/M
3300032032	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 32315	Environmental	Open in IMG/M
3300032088	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 21515	Environmental	Open in IMG/M
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental	Open in IMG/M
3300032360	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915	Environmental	Open in IMG/M
3300034695	Seawater microbial communities from the Northeast subarctic Pacific Ocean - P26_June_2012_500m	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
SI47jul10_100mDRAFT_10299783	3300000148	Marine	TKIMPIIASEIFVLELDVKKPTAHVKITRDITLGFINKYKDLIKLFKSN*
LP_J_08_P26_500DRAFT_10497912	3300000259	Marine	FKHPAAPEPKATKIIAIIASKVFRFGLEVKNPTAQVNTTRDITLGFVSDINDLI*
JGI12025J13092_1063263	3300000966	Deep Ocean	ATKVIPIIASIIFVLEFEVNNPTAHVNITRDITLGFISNMKDFI*
GBIDBA_100894444	3300001683	Hydrothermal Vent Plume	IASIIFIFELEVNNPTAHVNMTRDITLGFISNIKDFI*
Ga0066855_100648881	3300005402	Marine	KIIPIIASEIFIFELEVNNPTAQVNITRDITLGFMSDTKDLI*
Ga0066851_101534743	3300005427	Marine	PAAPEPMATKIIAMIASKVFKFGLEVKNPTAQVNITRDITLGFMSDINDLI*
Ga0066851_102337322	3300005427	Marine	IFKHPAAPEPNATKIIHVIALNIFVFELDVNKPTAQVNITRDITLGFINSNRDFI*
Ga0066850_101483681	3300005605	Marine	IFKHPAAPDPKATKIIHIIALVMLVLELDVNSPTAHVNITRDITLGFINNNNDFM*
Ga0066383_101201203	3300005953	Marine	AAPAPKATKVIPIIASIIFVLEFEVNNPTAHVNITRDITLGFISNMKDFI*
Ga0066382_102021563	3300006013	Marine	APAPNATKIIPIIASEIFIFELEVNNPTAQVNTTRDITLGFMSDTKDLI*
Ga0081592_11416771	3300006076	Diffuse Hydrothermal Fluids	ATKVIPIIASVIFIFEFEVNNPTAHVNITRDITLGFMSDTKDLI*
Ga0066836_100612875	3300006166	Marine	IALNIFVFELDVNKPTAQVNITRDITLGFINSNRDFI*
Ga0066836_102220931	3300006166	Marine	PAAPEPMATKIIAMIASKVFKFGLEVKNPTAQVNITRDITLGFISDINDLI*
Ga0066836_108923231	3300006166	Marine	APIATKVIEIITSKVFRVGLEVKNPTAQVNITRDITLGFISEIRDLV*
Ga0068469_12353811	3300006306	Marine	IYRATKNIPIIASIIFILEFEVNNPTAHVNMTRDITLGFINNIKDFI*
Ga0068470_13195723	3300006308	Marine	LTACAPKATKIIPIIASVIFVFEFEVNNPTAHVNITRDITLGFISDIKDFI*
Ga0068470_14510111	3300006308	Marine	ASKVFRFGLEVKNPTAHVNITRDITLGFMSDIKDLT*
Ga0068478_11408825	3300006311	Marine	IASVIFVFEFEVNNPTAHVNITRDITLGFISNIKDFI*
Ga0068472_104045921	3300006313	Marine	PIIASIIFVFELEVKNPTAQVNITRDITLGFMSDINDLA*
Ga0068480_13764741	3300006335	Marine	KHPAAPAPNATKNIPIIASIIFIFELEVNNPTAHVNMTRDITLGFINNIKDFI*
Ga0068502_17899114	3300006336	Marine	PAPKATKVIPIIASVIFVFEFEVNNPTAHVNITRDITLGFISNIKDFI*
Ga0099697_12974331	3300006347	Marine	AAPAPKATKIIPIIASVIFVFEFEVNNPTAHVNITRDITLGFISDIKDFI*
Ga0099957_12816444	3300006414	Marine	APAPKATKIIPIIASVIFVFEFEVNNPTAHVNITRDITLGFISNIKDFI*
Ga0099958_11682471	3300006567	Marine	APKATKIIPIIASVIFVFEFEVNNPTAHVNITRDITLGFISDIKDFI*
Ga0066372_109605551	3300006902	Marine	FKHPAAPAPNATKIIPIIASEIFIFEFEVNNPTAHVNITRDITLGFMSDTKDLI*
Ga0066366_101418542	3300007283	Marine	MFKHPAAPEPNATKIIHNIALYTFVIEFDVSKPTAQVNITRDITLGFINSIKDFI*
Ga0105019_12410351	3300007513	Marine	YHIFKHPAAPEPNATIIIHVIALNIFVFELDVNKPTAQVNITRDITLGFINSNKDFI*
Ga0102822_10260971	3300007558	Estuarine	MASIMPIFELEVKRPTAHVNITRDITLGFIKRYKDLINSLKSSET
Ga0105018_11142421	3300007760	Marine	AMIASKVFKFGLEVRNPTAQVNITRDITLGFMSDTNDLI*
Ga0105353_11280883	3300008249	Methane Seep Mesocosm	PAAPEPKATKVMAIIASKVFRFGLEVKNPTAQVNTTRDITLGFISDINDLI*
Ga0115656_10677141	3300008627	Marine	IATKIIEIIASKVFKLGSEVKNPTAQVNITRDITLGFISEIKDFV*
Ga0115660_10850631	3300008738	Marine	KATKVIAIIASKVFKFGLEVKKPTAQVNITRDITLGFMRDINDFK*
Ga0102911_10756901	3300009049	Estuarine	MPIIASIMPIFELEVKRPTAHVNITRDITLGFINRYKD
Ga0117902_12925421	3300009104	Marine	PAAPDPKATKVIAIIASKVFKFGLEVKKPTAQVNITRDITLGFMRDINDFK*
Ga0117922_11991431	3300009109	Marine	IIASAILVFEPDVKNPTAHVKITRDITLGFISCNKDLI*
Ga0118729_11476704	3300009130	Marine	ATKIIHIIALSMLMFALEVNSPTAHVNITRDITLGFINNNNDFI*
Ga0114995_106498211	3300009172	Marine	MALTISILELEVKRPTAHVKTTRDITLGFINKYKDLI*
Ga0114995_107538921	3300009172	Marine	KVIPIIASIISIFELEVKRPTAHVKITRDITLGFINKYKDLI*
Ga0114996_109167051	3300009173	Marine	VIASVIFIFEFEVKKPTAHVNITSDITLGFMSKYKDLI*
Ga0114993_104123001	3300009409	Marine	IAILVIASVIFIFEFEVKKPTAHVNITRDITLGFISKYKDLI*
Ga0114993_105000501	3300009409	Marine	NIPIIASVILVFELEVKKPTAHVNITRDMTLGFINKYKDFI*
Ga0114993_109300451	3300009409	Marine	NIPVIASAIFVFELEVKKPTAHVNITRDITLGFINKYNDLI*
Ga0114993_110153591	3300009409	Marine	IVLIFELEVKRPTAHVNITRDITLGFISKYKDLI*
Ga0114994_106847781	3300009420	Marine	APAPNATKVIPIIASIISIFELEVKRPTAHVKITRDITLGFISKYKDLI*
Ga0114994_107912561	3300009420	Marine	MPIIASVMPVFELEVKKPTAHVNITRDMTLGFISKYKDL
Ga0114994_110192781	3300009420	Marine	MASIMPIFELEVKRPTAHVNITRDITLGFIKRYKDLINSLKSSETV
Ga0114994_111022691	3300009420	Marine	IASIVFIFELEVKRPTAHVNITRDITLGFISKYKDLI*
Ga0114994_111028802	3300009420	Marine	PIIASIVFIFELEVKRPTAHVNITRDITLGFISKYKDLI*
Ga0114997_103368131	3300009425	Marine	MASLIFIFELEVKRPTAHVKITRDITLGFINEYKDLI*
Ga0114997_105647713	3300009425	Marine	PAPRATKVIPIIASIVFIFELEVKRPTAHVNITRDITLGFISKYKDLI*
Ga0115005_105626632	3300009432	Marine	MALIISILELEVKRPTAHVKTTRDITLGFINKYNDLI*
Ga0115005_114370071	3300009432	Marine	PAPNATKVIPIIASIISIFELEVKRPTAHVKITRDITLGFISKYKDLI*
Ga0115554_12375702	3300009472	Pelagic Marine	MASIMPIFELEVKRPTAHVNITRDITLGFIKRYKDLIN
Ga0115003_101424071	3300009512	Marine	MFKHPAAPAPKATRVIPIIASIVFIFEIEVKRPTAHVNITRDITLGFISKYKDLI
Ga0115003_104112011	3300009512	Marine	ASIVFIFELEVKRPTAHVNITRDITLGFISKYKDLI*
Ga0115003_107368391	3300009512	Marine	TKVMPIMALIISILELEVKRPTAHVKTTRDITLGFINKYNDLI*
Ga0115004_100675993	3300009526	Marine	MALIISILELEVKRPTAHVKTTRDITLGFINKYKDLI*
Ga0115004_102850514	3300009526	Marine	PAPKATKVIPIMASKTFIFELEVRRPTAHVNITRDITLGFINKYKDLI*
Ga0115000_101166555	3300009705	Marine	IASIILVFELEVKKPTAHVNITRDITLGFINRYKDLI*
Ga0115002_101017421	3300009706	Marine	APAPKATIAILVIASVIFIFEFEVKKPTAHVNITRDITLGFISKYKDLI*
Ga0115002_107895541	3300009706	Marine	PAAPATKATKNIPVIASAIFVFELEVKKPTVHVNITRDITLGFINKYKDLI*
Ga0115002_109859511	3300009706	Marine	TKVIPIMASIIFIFELEVKRPTAHVNITRDITLGFISKYKDLI*
Ga0115001_108163021	3300009785	Marine	MFKHPAAPAPKATKVIPIIASIIFIFELEVKRPTAHVNITRDITLGFINKYKDLI*
Ga0115001_109603652	3300009785	Marine	MASIISILELEVKRPTAQVNITRDITLGFIKRYKDLIN
Ga0115012_114049731	3300009790	Marine	MFRHPAAPAPNATKNIPIRASEVLVFEFEVKNPTAQVNITRDITLGFINKYNDLIKVPKSNSEI
Ga0133547_121461114	3300010883	Marine	ASIIFIFELEVKRPTAHVNITRDITLGFISKYKDLI*
Ga0163108_100938401	3300012950	Seawater	SATKIIHIIALSMFMFALEVNSPTAHVNITRDITLGFINNNNDFI*
Ga0187220_11191921	3300017768	Seawater	TRVILIIASITFISELEVKKPTAQVKITRDMTLGFINKYKDLK
Ga0211563_11148991	3300020322	Marine	AAPAPNATKIIPIIASEIFIFELEVNNPTAQVNITRDITLGFMRDTKDLI
Ga0211502_10888872	3300020332	Marine	EPRATKIIHIIALSMFMFVLEVNSPTAHVNITRDITLGFINNNNDFI
Ga0211613_11181553	3300020353	Marine	KATKIIAIIASKVFRFGLEVKNPTAQVNMTRDITLGFINDINDFI
Ga0211682_103681851	3300020376	Marine	KSDSYHIFKHPAAPAPKATKAIPIIASVMLVFELEVKKPTAHVNITRDMTLGFISKYKDL
Ga0211596_100277081	3300020384	Marine	IPIIESTMLIGDPDVNNPTAHVKIASDITLGFISNQRLRI
Ga0211552_101849391	3300020412	Marine	ASEIFIFELEVNNPTAQVNITRDITLGFMSDTKDLI
Ga0211516_102811203	3300020413	Marine	AIPIIASNIFEFELEVKNPTAQVNITRDITLGFINKYKDFK
Ga0211536_104069591	3300020426	Marine	PNATKIIPVIASKILVFESDVKNPTAHVKITRDITLGFISCNKDLI
Ga0211714_105547273	3300020466	Marine	IIHIIALSMLMFALEVNSPTAHVNITRDITLGFINNNNDFI
Ga0206686_11268713	3300021065	Seawater	SRSDSYHIFKHPAAPAPNATKIIPIIASEIFIFELEVNNPTAQVNITRDITLGFMSDTKDLI
Ga0206680_101874583	3300021352	Seawater	KHPAAPEPKATKVMAIIASKVFRFGLEVKNPTAQVNTTRDITLGFISDINDLI
Ga0226832_104397961	3300021791	Hydrothermal Vent Fluids	APNATKIIPIIASVIFVFEFEVNNPTAHVNITRDITLGFINNINDFI
Ga0208062_1043125	3300025195	Deep Ocean	APAPKATKVIPIIASIIFVLEFEVNNPTAHVNITRDITLGFISNMKDFI
Ga0208569_10050894	3300025200	Deep Ocean	PIIASIIFVLEFEVNNPTAHVNITRDITLGFISNMKDFI
Ga0207963_10535894	3300026080	Marine	AAPAPNATKIIPIIASEIFIFEFEVNNPTAHVNITRDITLGFMSDTKDLI
Ga0208879_11974121	3300026253	Marine	KLPAAPAPNATKIIATIASNVFRFGLEVKNPTAQVNTTRDITLGFMSDINDLM
Ga0208408_11082351	3300026260	Marine	SYHIFKHPAAPDPKATKIIHIIALVMLVLELDVNSPTAHVNITRDITLGFINNNNDFM
Ga0208764_101068101	3300026321	Marine	HIFKHPAAPAPNATKIIPIIASEIFIFESEVNNPTAHVNITRDITLGFMSDTNDLI
Ga0209034_100226531	3300027755	Marine	SKVFRFGLEVKNPTAQVNMTRDITLGFINDINDFI
Ga0209711_100462571	3300027788	Marine	FRHPAAPAPKATKDIPIIASVMLVFEFDVNKPTAHVNMTRDITLGFISRYND
Ga0209501_107728151	3300027844	Marine	PAAPAPKATKVIPTMASVMLVFELEVKKPTAHVNITRDMTLGFISKYKDLI
Ga0209402_101003385	3300027847	Marine	TKVIPIIVLVIFVFEFEVNNPTAHVNITRDITLGFINNIKDFI
Ga0257107_11857401	3300028192	Marine	FKHPAAPAPNATKIIPIIASEIFIFELEVNNPTAHVNITRDITLGFMSDTKDLI
Ga0257109_10383374	3300028487	Marine	SIIFVFEFEVNNPTAQVNITRDITLGFISNIKDFI
Ga0257109_11596153	3300028487	Marine	ATKIIPIIASEIFIFELEVNNPTAQVNITRDITLGFMSDTKDLI
Ga0308149_10494901	3300031542	Marine	TKVIPIIASIIFIFELEVKRPTAHVNITRDITLGFINKYKDLI
Ga0315326_107904783	3300031775	Seawater	APAPNATKIIPIIASEIFIFEFEVNNPTAHVNITRDITLGFMSDTNDLI
Ga0310121_107464971	3300031801	Marine	YHMFKHPAAPAPKATKVIPIIALVIFVFEFEVNNPTAHVNITRDITLGFINNIKDFI
Ga0310123_102943834	3300031802	Marine	AAPAPKATKVIPIIASIIFVLEFEVNNPTAHVNITRDITLGFISNMKDFI
Ga0310123_109166592	3300031802	Marine	APKATKDIPIIASVILVLEFEVKKPTAHVNITSDITLGFMSKYKDLI
Ga0310120_102496601	3300031803	Marine	SYHIFKHPAAPAPKATKDIPIIASVILVLEFEVKKPTAHVNITSDITLGFMSKYKDLI
Ga0310124_102937074	3300031804	Marine	PTATKATPIIALVIFIFELEVKRPTAHVNITRDITLGFISKYKDLM
Ga0310125_101116001	3300031811	Marine	FKHPAAPAPIATKIIPIIASEIFIFELEVNNPTAQVNITRDITLGFMSDTKDLI
Ga0315318_105910383	3300031886	Seawater	IIASEIFIFELEVNNPTAHVNITRDITLGFMSNTKDLI
Ga0310344_104042324	3300032006	Seawater	HPAAPEPSATKIIPSIALIILIFEFDVSNPTAQVNMTRDITLGFISNIKDLI
Ga0310344_105068444	3300032006	Seawater	AAPAPIATKIIEIIASKVFIVGLEAKNPTAQVNITRDITLGFISDINDLI
Ga0310344_110950563	3300032006	Seawater	ASKIFVFEFEVNSPTAHVNITRDITLGFINNIKDFI
Ga0315316_110388651	3300032011	Seawater	IASVIFVFEFEVNNPTAHVNITRDITLGFISNIKDFI
Ga0315327_105388423	3300032032	Seawater	NATKIIHAIALNIFVFELDVNKPTAQVNITRDITLGFINSNRDFI
Ga0315321_101782961	3300032088	Seawater	FKHPAAPEPSATKIIHTIALTMFMFVLEVNNPTAHVNITRDITLGFINNNNDFI
Ga0310345_103730041	3300032278	Seawater	SVIFIFEFEVNNPTAHVNITRDITLGFISNIKDFI
Ga0315334_109231321	3300032360	Seawater	APIATNIIEIIASKVFRVGLEVNNPTVQVNITRDITLGFISEIRDLA
Ga0315334_118084582	3300032360	Seawater	PIIASEIFIFELEVNNPTAQVNITRDITLGFMSDTKDLI
Ga0372840_216127_425_568	3300034695	Seawater	APNATKIIPIIASEIFIFELEVNNPTAHVNITRDITLGFMSDTKDLI

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084715

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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