NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F084732

Metagenome / Metatranscriptome Family F084732

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F084732
Family Type Metagenome / Metatranscriptome
Number of Sequences 112
Average Sequence Length 63 residues
Representative Sequence MSKNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYINANPFIKPKEMTEETLKELIQNIFELNEE
Number of Associated Samples 86
Number of Associated Scaffolds 112

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 75.00 %
% of genes near scaffold ends (potentially truncated) 31.25 %
% of genes from short scaffolds (< 2000 bps) 75.89 %
Associated GOLD sequencing projects 78
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (58.929 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine
(23.214 % of family members)
Environment Ontology (ENVO) Unclassified
(71.429 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(81.250 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 54.69%    β-sheet: 0.00%    Coil/Unstructured: 45.31%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 112 Family Scaffolds
PF07733DNA_pol3_alpha 58.93
PF00166Cpn10 20.54
PF03819MazG 4.46
PF02562PhoH 0.89
PF01176eIF-1a 0.89
PF04820Trp_halogenase 0.89

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 112 Family Scaffolds
COG0587DNA polymerase III, alpha subunitReplication, recombination and repair [L] 58.93
COG2176DNA polymerase III, alpha subunit (gram-positive type)Replication, recombination and repair [L] 58.93
COG0234Co-chaperonin GroES (HSP10)Posttranslational modification, protein turnover, chaperones [O] 20.54
COG0361Translation initiation factor IF-1Translation, ribosomal structure and biogenesis [J] 0.89
COG1702Phosphate starvation-inducible protein PhoH, predicted ATPaseSignal transduction mechanisms [T] 0.89
COG1875Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domainsGeneral function prediction only [R] 0.89


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A58.93 %
All OrganismsrootAll Organisms41.07 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000225|SI34jun09_120mDRAFT_1000439Not Available18590Open in IMG/M
3300000254|SI34jun09_100mDRAFT_1010246All Organisms → Viruses → Predicted Viral2555Open in IMG/M
3300000928|OpTDRAFT_10138501All Organisms → Viruses → Predicted Viral1431Open in IMG/M
3300000928|OpTDRAFT_10219850Not Available896Open in IMG/M
3300000930|BpDRAFT_10081751All Organisms → Viruses → Predicted Viral1503Open in IMG/M
3300000930|BpDRAFT_10081752Not Available917Open in IMG/M
3300004279|Ga0066605_10362827Not Available524Open in IMG/M
3300005941|Ga0070743_10007232All Organisms → Viruses → Predicted Viral3957Open in IMG/M
3300006164|Ga0075441_10031159All Organisms → Viruses → Predicted Viral2166Open in IMG/M
3300006164|Ga0075441_10046466All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae1732Open in IMG/M
3300006164|Ga0075441_10062432All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae1461Open in IMG/M
3300006164|Ga0075441_10114100All Organisms → Viruses → Predicted Viral1031Open in IMG/M
3300006164|Ga0075441_10172374Not Available811Open in IMG/M
3300006165|Ga0075443_10043835All Organisms → Viruses → Predicted Viral1500Open in IMG/M
3300006165|Ga0075443_10151417Not Available818Open in IMG/M
3300006190|Ga0075446_10101732All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae842Open in IMG/M
3300006191|Ga0075447_10093149All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae1051Open in IMG/M
3300006191|Ga0075447_10206215Not Available645Open in IMG/M
3300006193|Ga0075445_10256160Not Available598Open in IMG/M
3300006352|Ga0075448_10279477Not Available506Open in IMG/M
3300006752|Ga0098048_1059546Not Available1188Open in IMG/M
3300006752|Ga0098048_1126453Not Available767Open in IMG/M
3300006789|Ga0098054_1136286All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae910Open in IMG/M
3300006793|Ga0098055_1082756All Organisms → Viruses → Predicted Viral1261Open in IMG/M
3300006793|Ga0098055_1181026Not Available804Open in IMG/M
3300006793|Ga0098055_1223796Not Available711Open in IMG/M
3300006793|Ga0098055_1281977All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae622Open in IMG/M
3300006947|Ga0075444_10018376All Organisms → Viruses → Predicted Viral3666Open in IMG/M
3300007557|Ga0102821_1025210All Organisms → Viruses → Predicted Viral1593Open in IMG/M
3300007665|Ga0102908_1097001Not Available593Open in IMG/M
3300008224|Ga0105350_10250013Not Available662Open in IMG/M
3300008950|Ga0102891_1174266Not Available631Open in IMG/M
3300009050|Ga0102909_1066875Not Available886Open in IMG/M
3300009052|Ga0102886_1094527Not Available912Open in IMG/M
3300009054|Ga0102826_1004903All Organisms → Viruses → Predicted Viral3455Open in IMG/M
3300009142|Ga0102885_1032719All Organisms → Viruses → Predicted Viral1229Open in IMG/M
3300009142|Ga0102885_1160170Not Available551Open in IMG/M
3300009409|Ga0114993_10148724All Organisms → Viruses → Predicted Viral1827Open in IMG/M
3300009420|Ga0114994_10010591Not Available6573Open in IMG/M
3300009420|Ga0114994_10314734All Organisms → Viruses → Predicted Viral1042Open in IMG/M
3300009436|Ga0115008_10091962All Organisms → Viruses → Predicted Viral2266Open in IMG/M
3300010149|Ga0098049_1009375All Organisms → Viruses → Predicted Viral3353Open in IMG/M
3300010149|Ga0098049_1123872Not Available803Open in IMG/M
3300010150|Ga0098056_1161934Not Available753Open in IMG/M
3300012419|Ga0138260_11049406Not Available756Open in IMG/M
3300017706|Ga0181377_1001694All Organisms → cellular organisms → Bacteria7009Open in IMG/M
3300017729|Ga0181396_1013334All Organisms → Viruses → Predicted Viral1638Open in IMG/M
3300020335|Ga0211690_1044230All Organisms → Viruses → Predicted Viral1036Open in IMG/M
3300020352|Ga0211505_1024357All Organisms → Viruses → Predicted Viral1551Open in IMG/M
3300020376|Ga0211682_10007537All Organisms → Viruses → Predicted Viral4620Open in IMG/M
3300021068|Ga0206684_1154994Not Available755Open in IMG/M
3300021084|Ga0206678_10051869All Organisms → Viruses → Predicted Viral2206Open in IMG/M
3300021084|Ga0206678_10183202Not Available1046Open in IMG/M
3300021085|Ga0206677_10011094Not Available6192Open in IMG/M
3300021359|Ga0206689_10058576Not Available605Open in IMG/M
3300021375|Ga0213869_10018276All Organisms → Viruses → Predicted Viral4007Open in IMG/M
3300023568|Ga0228696_1040905Not Available528Open in IMG/M
3300023702|Ga0232119_1072867Not Available512Open in IMG/M
3300024188|Ga0228602_1089762Not Available535Open in IMG/M
3300024226|Ga0228667_1022493All Organisms → Viruses → Predicted Viral1277Open in IMG/M
3300024226|Ga0228667_1098311Not Available548Open in IMG/M
3300024235|Ga0228665_1112615Not Available560Open in IMG/M
3300024236|Ga0228655_1095886Not Available635Open in IMG/M
(restricted) 3300024255|Ga0233438_10057856All Organisms → Viruses → Predicted Viral1930Open in IMG/M
3300024292|Ga0228630_1115157Not Available533Open in IMG/M
3300024296|Ga0228629_1055562Not Available1068Open in IMG/M
3300024326|Ga0228652_1079390Not Available788Open in IMG/M
3300024343|Ga0244777_10918162Not Available510Open in IMG/M
3300024508|Ga0228663_1049205Not Available799Open in IMG/M
3300025083|Ga0208791_1028103Not Available1081Open in IMG/M
3300025108|Ga0208793_1146019Not Available628Open in IMG/M
3300025639|Ga0209495_1173076Not Available570Open in IMG/M
3300025667|Ga0209043_1094986Not Available796Open in IMG/M
3300025676|Ga0209657_1029562All Organisms → Viruses → Predicted Viral2164Open in IMG/M
3300026453|Ga0228644_1047553Not Available815Open in IMG/M
3300026465|Ga0247588_1032862All Organisms → Viruses → Predicted Viral1004Open in IMG/M
3300027197|Ga0208922_1023731All Organisms → Viruses → Predicted Viral1100Open in IMG/M
3300027522|Ga0209384_1005906All Organisms → Viruses → Predicted Viral4854Open in IMG/M
3300027522|Ga0209384_1082069Not Available797Open in IMG/M
3300027668|Ga0209482_1001191Not Available18695Open in IMG/M
3300027668|Ga0209482_1006125Not Available6385Open in IMG/M
3300027668|Ga0209482_1081246All Organisms → Viruses → Predicted Viral1084Open in IMG/M
3300027672|Ga0209383_1007520Not Available5443Open in IMG/M
3300027704|Ga0209816_1009414Not Available5841Open in IMG/M
3300027704|Ga0209816_1040639All Organisms → Viruses → Predicted Viral2193Open in IMG/M
3300027714|Ga0209815_1214619Not Available590Open in IMG/M
3300027779|Ga0209709_10051318Not Available2382Open in IMG/M
3300027833|Ga0209092_10060155All Organisms → Viruses → Predicted Viral2327Open in IMG/M
3300028136|Ga0228608_1050550All Organisms → Viruses → Predicted Viral1207Open in IMG/M
3300028196|Ga0257114_1009706All Organisms → cellular organisms → Bacteria → Proteobacteria5142Open in IMG/M
3300028282|Ga0256413_1127896Not Available923Open in IMG/M
3300028414|Ga0228627_1044872All Organisms → Viruses → Predicted Viral1217Open in IMG/M
3300031141|Ga0308021_10054892Not Available1649Open in IMG/M
3300031142|Ga0308022_1172568Not Available615Open in IMG/M
3300031167|Ga0308023_1080116Not Available608Open in IMG/M
3300031510|Ga0308010_1207326Not Available706Open in IMG/M
3300031599|Ga0308007_10144124Not Available854Open in IMG/M
3300031612|Ga0308009_10003703Not Available7315Open in IMG/M
3300031612|Ga0308009_10186832Not Available778Open in IMG/M
3300031628|Ga0308014_1026922All Organisms → Viruses → Predicted Viral1477Open in IMG/M
3300031630|Ga0308004_10040233All Organisms → Viruses → Predicted Viral2050Open in IMG/M
3300031644|Ga0308001_10062996Not Available1590Open in IMG/M
3300031655|Ga0308018_10075710All Organisms → Viruses → Predicted Viral1197Open in IMG/M
3300031658|Ga0307984_1041567All Organisms → Viruses → Predicted Viral1463Open in IMG/M
3300031658|Ga0307984_1205522Not Available536Open in IMG/M
3300031688|Ga0308011_10057501Not Available1229Open in IMG/M
3300031688|Ga0308011_10074667Not Available1056Open in IMG/M
3300031688|Ga0308011_10119267Not Available805Open in IMG/M
3300031688|Ga0308011_10208604Not Available588Open in IMG/M
3300031696|Ga0307995_1203635Not Available701Open in IMG/M
3300031703|Ga0308002_1013840All Organisms → Viruses → Predicted Viral2010Open in IMG/M
3300031848|Ga0308000_10381596Not Available536Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine23.21%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine17.86%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine16.96%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater15.18%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine8.93%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine3.57%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater3.57%
Freshwater And MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine3.57%
Methane Seep MesocosmEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Methane Seep Mesocosm1.79%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.89%
MarineEnvironmental → Aquatic → Marine → Inlet → Unclassified → Marine0.89%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.89%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine0.89%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater0.89%
Polar MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Polar Marine0.89%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000225Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 34 06/16/09 120mEnvironmentalOpen in IMG/M
3300000254Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 34 06/16/09 100mEnvironmentalOpen in IMG/M
3300000928Marine plume microbial communities from the Columbia River - 25 PSUEnvironmentalOpen in IMG/M
3300000930Marine microbial communities from the coastal margin of the Columbia River, USA - 33 PSU, 16mEnvironmentalOpen in IMG/M
3300004279Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10mEnvironmentalOpen in IMG/M
3300005941Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697EnvironmentalOpen in IMG/M
3300006164Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNAEnvironmentalOpen in IMG/M
3300006165Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNAEnvironmentalOpen in IMG/M
3300006190Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNAEnvironmentalOpen in IMG/M
3300006191Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNAEnvironmentalOpen in IMG/M
3300006193Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNAEnvironmentalOpen in IMG/M
3300006352Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNAEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006947Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNAEnvironmentalOpen in IMG/M
3300007557Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.715EnvironmentalOpen in IMG/M
3300007665Estuarine microbial communities from the Columbia River estuary - metaG 1557A-3EnvironmentalOpen in IMG/M
3300008224Methane-oxidizing microbial communities from mesocosms in the Hudson Canyon - EN1E Hudson CanyonEnvironmentalOpen in IMG/M
3300008950Estuarine microbial communities from the Columbia River estuary - metaG 1552A-02EnvironmentalOpen in IMG/M
3300009050Estuarine microbial communities from the Columbia River estuary - metaG 1557A-02EnvironmentalOpen in IMG/M
3300009052Estuarine microbial communities from the Columbia River estuary - metaG 1550A-02EnvironmentalOpen in IMG/M
3300009054Estuarine microbial communities from the Columbia River estuary - metaG S.737EnvironmentalOpen in IMG/M
3300009142Estuarine microbial communities from the Columbia River estuary - metaG 1550B-3EnvironmentalOpen in IMG/M
3300009409Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150EnvironmentalOpen in IMG/M
3300009420Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152EnvironmentalOpen in IMG/M
3300009436Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M MetagenomeEnvironmentalOpen in IMG/M
3300010149Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaGEnvironmentalOpen in IMG/M
3300010150Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaGEnvironmentalOpen in IMG/M
3300012419Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 24hr light incubation - RNA10.B_24.20151111 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017706Marine viral communities from the Subarctic Pacific Ocean - Lowphox_13 viral metaGEnvironmentalOpen in IMG/M
3300017729Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 19 SPOT_SRF_2011-01-11EnvironmentalOpen in IMG/M
3300020335Marine microbial communities from Tara Oceans - TARA_B100000768 (ERX556030-ERR599035)EnvironmentalOpen in IMG/M
3300020352Marine microbial communities from Tara Oceans - TARA_B100000497 (ERX556084-ERR599144)EnvironmentalOpen in IMG/M
3300020376Marine microbial communities from Tara Oceans - TARA_B100000795 (ERX555997-ERR599121)EnvironmentalOpen in IMG/M
3300021068Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 100m 12015EnvironmentalOpen in IMG/M
3300021084Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 12015EnvironmentalOpen in IMG/M
3300021085Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015EnvironmentalOpen in IMG/M
3300021359Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 12015 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021375Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132EnvironmentalOpen in IMG/M
3300023568Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 84R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300023702Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 82R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024188Seawater microbial communities from Monterey Bay, California, United States - 2DEnvironmentalOpen in IMG/M
3300024226Seawater microbial communities from Monterey Bay, California, United States - 81DEnvironmentalOpen in IMG/M
3300024235Seawater microbial communities from Monterey Bay, California, United States - 79DEnvironmentalOpen in IMG/M
3300024236Seawater microbial communities from Monterey Bay, California, United States - 67DEnvironmentalOpen in IMG/M
3300024255 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MGEnvironmentalOpen in IMG/M
3300024292Seawater microbial communities from Monterey Bay, California, United States - 37DEnvironmentalOpen in IMG/M
3300024296Seawater microbial communities from Monterey Bay, California, United States - 36DEnvironmentalOpen in IMG/M
3300024326Seawater microbial communities from Monterey Bay, California, United States - 64DEnvironmentalOpen in IMG/M
3300024343Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fractionEnvironmentalOpen in IMG/M
3300024508Seawater microbial communities from Monterey Bay, California, United States - 77DEnvironmentalOpen in IMG/M
3300025083Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025108Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025639Methane-oxidizing microbial communities from mesocosms in the Hudson Canyon - EN1E Hudson Canyon (SPAdes)EnvironmentalOpen in IMG/M
3300025667Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S4LV_100m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025676Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_100m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300026453Seawater microbial communities from Monterey Bay, California, United States - 56DEnvironmentalOpen in IMG/M
3300026465Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 48R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300027197Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.743 (SPAdes)EnvironmentalOpen in IMG/M
3300027522Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027668Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027672Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027704Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027714Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027779Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)EnvironmentalOpen in IMG/M
3300027833Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300028136Seawater microbial communities from Monterey Bay, California, United States - 9DEnvironmentalOpen in IMG/M
3300028196Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI112_10mEnvironmentalOpen in IMG/M
3300028282Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - WCR_77 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300028414Seawater microbial communities from Monterey Bay, California, United States - 33DEnvironmentalOpen in IMG/M
3300031141Marine microbial communities from water near the shore, Antarctic Ocean - #351EnvironmentalOpen in IMG/M
3300031142Marine microbial communities from water near the shore, Antarctic Ocean - #353EnvironmentalOpen in IMG/M
3300031167Marine microbial communities from water near the shore, Antarctic Ocean - #418EnvironmentalOpen in IMG/M
3300031510Marine microbial communities from water near the shore, Antarctic Ocean - #129EnvironmentalOpen in IMG/M
3300031599Marine microbial communities from water near the shore, Antarctic Ocean - #71EnvironmentalOpen in IMG/M
3300031612Marine microbial communities from water near the shore, Antarctic Ocean - #127EnvironmentalOpen in IMG/M
3300031628Marine microbial communities from water near the shore, Antarctic Ocean - #229EnvironmentalOpen in IMG/M
3300031630Marine microbial communities from water near the shore, Antarctic Ocean - #38EnvironmentalOpen in IMG/M
3300031644Marine microbial communities from water near the shore, Antarctic Ocean - #5EnvironmentalOpen in IMG/M
3300031655Marine microbial communities from water near the shore, Antarctic Ocean - #282EnvironmentalOpen in IMG/M
3300031658Marine microbial communities from Ellis Fjord, Antarctic Ocean - #78EnvironmentalOpen in IMG/M
3300031688Marine microbial communities from water near the shore, Antarctic Ocean - #177EnvironmentalOpen in IMG/M
3300031696Marine microbial communities from Ellis Fjord, Antarctic Ocean - #262EnvironmentalOpen in IMG/M
3300031703Marine microbial communities from water near the shore, Antarctic Ocean - #34EnvironmentalOpen in IMG/M
3300031848Marine microbial communities from water near the shore, Antarctic Ocean - #3EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
SI34jun09_120mDRAFT_1000439193300000225MarineMNKNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYINSNPYIKPKEITEETLKELIQNIFELNEE*
SI34jun09_100mDRAFT_101024623300000254MarineMSKNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYVNNNPYIKPKEMTEETLKELIQNIFELNEE*
OpTDRAFT_1013850113300000928Freshwater And MarineNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYINNNPYIKPKEMTEETLKELIQNIFELNEE*
OpTDRAFT_1021985013300000928Freshwater And MarineNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYVNNNPYIKPKEMTEETLKELIQNIFELNEE*
BpDRAFT_1008175153300000930Freshwater And MarineMNKNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYVNNNPYIKPKEMTEETLKELIQNIFELNEE*
BpDRAFT_1008175213300000930Freshwater And MarineMSKNIIKFPNSKRKLSNEEEKIIRVSANLIHNTYINASPFIKPKEMTEETLKELIQNXXXXXXLN*
Ga0066605_1036282723300004279MarineMSF*DNMNKNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYINSNPYIKPKEITEETLKELIQNIFELNEE*
Ga0070743_1000723223300005941EstuarineMNKNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYINNNPYIKPKEMTEETLKELIQNIFELNEE*
Ga0075441_1003115933300006164MarineMSKNVIKFPNSKRKLTNEEEKIIRQSANLIHNTYINNNPFIKPKEMTEETLKELIQDIFELNED*
Ga0075441_1004646643300006164MarineMSRNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYINTNPFIKPKEMTEETLKELIQNIFELNEE*
Ga0075441_1006243243300006164MarineMMKKNVIKFPNSKRKLSLEEEKLVNVSANLIHNAYVNASPFIKPKEMTEETLKELIHNIFELNEE*
Ga0075441_1011410023300006164MarineMSKDIIKFPNSKRKLSDEEEKFIRVSANVIHNTYVNASPFVKPKDVTEETLKELIQSIFELNEE*
Ga0075441_1017237433300006164MarineK*VFKMMKKNVIKFPNSKRKLSLEEEKLVNVSANLIHNAYVNANPFLKPKEMTEETLKELIHNIFELNEE*
Ga0075443_1004383533300006165MarineMSKNVIKFPNSKRKLTNEEEKIIRQSANLIHNTYSNNNPFIKPKEMTEETLKELIQDIFELNED*
Ga0075443_1015141713300006165MarineMMKKNVIKFPNSKRKLSLEEEKLVNVSANLIHNAYVNASPFIKPKEMTEETLKELI
Ga0075446_1010173223300006190MarineMIKKNVIKFPNSKRKLSLEEEKLVNVSANLIHNAYVNASPFIKPKEMTEETLKELIHNIFELNEE*
Ga0075447_1009314933300006191MarineMMKKNVIKFPNSKRKLSLEEEKLVNVSANLIHNAYVNANPFLKPKEMTEETLKELIHNIFELNEE*
Ga0075447_1020621513300006191MarineMSKDIIKFPNSKRKLSDEEEKFIRVSANVIHNTYINASPFVKPKDVTEETLKELIQSIFELNEE*
Ga0075445_1025616023300006193MarineKKNVIKFPNSKRKLSLEEEKLVNVSANLIHNAYVNASPFIKPKEMTEETLKELIHNIFELNEE*
Ga0075448_1027947713300006352MarineMSKDIIKFPNSKRKLSDEEEKFIRVSANVIHNTYINASPFVKPKDVTEETLKELIQSIFE
Ga0098048_105954633300006752MarineMSKNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYTGPNMYIKPKKMTEETLKELIQNIFELNEE*
Ga0098048_112645333300006752MarineMNKNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYVNNNPYIKPKKMTEETLK
Ga0098054_113628623300006789MarineMNKNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYINASPFIKPKQMTEETLKELIQNIFELNEE*
Ga0098055_108275623300006793MarineMSKNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYINASPFIKPKQMTEETLKELIQNIFELNEE*
Ga0098055_118102623300006793MarineMSKNIIKFPNSKRKLSNEEEKIIRVSANLIHNTYINASPFIKPKEMTEETLKELIQNIFELNEE*
Ga0098055_122379613300006793MarineMSKNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYINANPFIKPKEMTEETLKELIQNIFELNEE*
Ga0098055_128197723300006793MarineMNF*DNMNKNVIKFPNSKRKLSDEEEKIIRVSANVIHNTYVNASPFIKPKDITEETLKELIQEIFELNEE*
Ga0075444_1001837663300006947MarineMKKNVIKFPNSKRKLSDEEEKLVNVSANLIHNAYINTSPFIKPKEMTEETLKELIHNIFELNED*
Ga0102821_102521013300007557EstuarineMNKNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYINSNPYIKPKEITEETLKELIQNIFELNE
Ga0102908_109700123300007665EstuarineMNKNIIKFPNSKRKLSNEEEKIIRVSANLIHNTYINASPFIKPKEMTEETLKELIQNIFELNEE*
Ga0105350_1025001323300008224Methane Seep MesocosmMNKGGIIKFPNTRRKLSDEEEKLVNVSTNLIHNAYINTSPFIKPKEMTEETLKELIHDIFELNEE*
Ga0102891_117426613300008950EstuarineMNKNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYVNNNPYIKPKEMTEETLKELIQNIFE
Ga0102909_106687523300009050EstuarineMSKNIIKFPNSKRKLSNEEEKIIRVSANLIHNTYINNNPYIKPKEMTEETLKELIQNIFELNEE*
Ga0102886_109452733300009052EstuarineMNKNIIKFPNSKRKLSDDEEKIIRVSANLIHNRYTGPNMYVNPKKMNEETLKELIHDIFELNED*
Ga0102826_100490333300009054EstuarineMNKNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYTGPNMYIKPKKMTEETLKELIQNIFELNEE*
Ga0102885_103271913300009142EstuarineDNMSKNIIKFPNSKRKLSNEEEKIIRVSANLIHNTYINASPFIKPKEMTEETLKELIQNIFELNEE*
Ga0102885_116017023300009142EstuarineMNKNIIKFPNSKRKLSDDEEKIIRVSANLIHNTYVNNNPYIKPKEMTEETLKELIQNIFELNEE*
Ga0114993_1014872453300009409MarineMKKNVIKFPNSKRKLSLEEEKLVNVSANLIHNAYVNASPFIKPKEMTEETLKELIQDIFELNED*
Ga0114994_1001059133300009420MarineMSKDIIKFPNSKRKLSDEEEKFIRVSANVIHNTYINASPFIKPKDVTEETLKELIQNIFELNEE*
Ga0114994_1031473433300009420MarineMKKNVIKFPNSKRKLSLEEEKLVNVSANLIHNAYVNASPFIKPKEMTEETLKELIHNIFELNEE*
Ga0115008_1009196243300009436MarineMNKNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYVNNNPYMKPKEMTEETLKELIQNIFELNEE*
Ga0098049_100937513300010149MarineNSKRKLSDEEEKIIRVSANLIHNTYINASPFIKPKQMTEETLKELIQNIFELNEE*
Ga0098049_112387213300010149MarineMSKNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYVNNNPYIKPKKMTEETLKELIQNIFELNEE*
Ga0098056_116193423300010150MarineMNKNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYVNNNPYIKPKKMTEETLKELIQNIFELNEE*
Ga0138260_1104940623300012419Polar MarineMMKKNVIKFPNSKRKLSLEEEKLVNVSANLIHNAYVNASPFIKPKEMTEETLKELIHNIFELNED*
Ga0181377_1001694163300017706MarineMNKNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYVNNNPYIKPKQMTEETLKELIQNIFELNEE
Ga0181396_101333423300017729SeawaterMSKNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYVNNNPYIKPKEMTEETLKELIQNIFELNEE
Ga0211690_104423023300020335MarineMSKDIIKFPNSKRKLSDEEEKFIRVSANVIHNTYINASPFIKPKDVTEETLKELIQSIFELNEE
Ga0211505_102435753300020352MarineRKLSDEEEKIIRVSANLIHNTYTGPNMYIKPKQMTEETLKELIQNIFELNEE
Ga0211682_1000753723300020376MarineMSKDIIKFPNSKRKLSDEEEKFIRVSANVIHNTYVNASPFVKPKDVTEETLKELIQSIFELNEE
Ga0206684_115499413300021068SeawaterMNKNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYVNNNPYIKPKEMTEETLKELIQNIFELN
Ga0206678_1005186943300021084SeawaterMNKNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYTGPNMYIKPKKMTEETLKELIQNIFELNEE
Ga0206678_1018320223300021084SeawaterMNKGGIIKFPNTRRKLSEEEEKLVNVSTNLIHNAYINASPFIKPKEMTEETLKELIHDIFELNEE
Ga0206677_10011094123300021085SeawaterMNKNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYVNNNPYIKPKEMTEETLKELIQNIFELNEE
Ga0206689_1005857623300021359SeawaterMNKNIIKFPNSKRKLSNEEEKIIRVSANLIHNTYINASPFIKPKEMTEETLKELIQNIFELNEE
Ga0213869_1001827653300021375SeawaterMNKNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYINNNPYIKPKEMTEETLKELIQNIFELNEE
Ga0228696_104090523300023568SeawaterMSFXDNMNKNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYVNNNPYIKPKEMTEETLKELIQNIFELNEE
Ga0232119_107286713300023702SeawaterRKLSDEEEKIIRVSANLIHNTYVNNNPYIKPKEMTEETLKELIQNIFELNEE
Ga0228602_108976223300024188SeawaterMSFXDNMNKNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYTGPNMYIKPKKMTEETLKELIQNIFELNEE
Ga0228667_102249333300024226SeawaterMNKNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYVNNNPYIKPKEMTEETLKELIQN
Ga0228667_109831123300024226SeawaterMSKDIIKFPNSKRKLSDEEEKFIRVSANVIHNTYINASPFIKPKDVTEETQKELIQSIFELNEE
Ga0228665_111261523300024235SeawaterMNKNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYVNNNPYIKPKEMTEETLKELIQNI
Ga0228655_109588623300024236SeawaterMSFXDNMSKNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYINANPFIKPKEMTEETLKELIQNIFELNEE
(restricted) Ga0233438_1005785623300024255SeawaterMNKNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYINSNPYIKPKEITEETLKELIQNIFELNEE
Ga0228630_111515723300024292SeawaterMSFXDNMSKNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYVNNNPYIKPKEMTEETLKELIQNIFELNEE
Ga0228629_105556213300024296SeawaterNMSKNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYINANPFIKPKEMTEETLKELIQNIFELNEE
Ga0228652_107939033300024326SeawaterKNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYINANPFIKPKEMTEETLKELIQNIFELNEE
Ga0244777_1091816213300024343EstuarineMSKNIIKFPNSKRKLSNEEEKIIRVSANLIHNTYINASPFIKPKEMTEETLKELIQNIFELNEE
Ga0228663_104920533300024508SeawaterMNKNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYVNNNPYIKPKEMTEETLKEL
Ga0208791_102810333300025083MarineMSKNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYINASPFIKPKQMTEETLKELIQNIFELNEE
Ga0208793_114601923300025108MarineMSKNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYTGPNMYIKPKKMTEETLKELIQNIFELNEE
Ga0209495_117307623300025639Methane Seep MesocosmMNKGGIIKFPNTRRKLSDEEEKLVNVSTNLIHNAYINTSPFIKPKEMTEETLKELIHDIFELNEE
Ga0209043_109498633300025667MarineNSKRKLSDEEEKIIRVSANLIHNTYINSNPYIKPKEITEETLKELIQNIFELNEE
Ga0209657_102956223300025676MarineMSKNVIKFPNSKRKLTNEEEKIIRQSANLIHNTYVNNNPFIKPKEMTEETLKELIQDIFELNED
Ga0228644_104755323300026453SeawaterMSKNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYINANPFIKPKEMTEETLKELIQNIFELNEE
Ga0247588_103286213300026465SeawaterMSKDIIKFPNSKRKLSDEEEKFIRVSANVIHNTYINASPFIKPKDVTEETLKELIQSIFELNE
Ga0208922_102373133300027197EstuarineMSFXDNMNKNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYINNNPYIKPKEMTEETLKELIQNIFELNEE
Ga0209384_100590653300027522MarineMSRNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYINTNPFIKPKEMTEETLKELIQNIFELNEE
Ga0209384_108206923300027522MarineMMKKNVIKFPNSKRKLSLEEEKLVNVSANLIHNAYVNASPFIKPKEMTEETLKELIHNIFELNEE
Ga0209482_100119183300027668MarineMSKNVIKFPNSKRKLTNEEEKIIRQSANLIHNTYSNNNPFIKPKEMTEETLKELIQDIFELNED
Ga0209482_1006125113300027668MarineMMKKNVIKFPNSKRKLSLEEEKLVNVSANLIHNAYVNANPFLKPKEMTEETLKELIHNIFELNEE
Ga0209482_108124623300027668MarineMSKDIIKFPNSKRKLSDEEEKFIRVSANVIHNTYINASPFVKPKDVTEETLKELIQSIFELNEE
Ga0209383_100752053300027672MarineMNKSGIIKFPNTRRKLSEEEEKLVNVSTNLIHNAYINANPFIKPKEMTEETLKELIHDIFELNEE
Ga0209816_100941453300027704MarineMKKNVIKFPNSKRKLSDEEEKLVNVSANLIHNAYINTSPFIKPKEMTEETLKELIHNIFELNED
Ga0209816_104063923300027704MarineMKKNVIKFPNSKRKLSDEEEKLVSVSTNLIHNAYINASPFVKPKEMTEETLKELIHNIFELNEE
Ga0209815_121461923300027714MarineMSFXDNMSKDIIKFPNSKRKLSDEEEKFIRVSANVIHNTYVNASPFVKPKDVTEETLKELIQSIFELNEE
Ga0209709_1005131833300027779MarineMSKDIIKFPNSKRKLSDEEEKFIRVSANVIHNTYINASPFIKPKDVTEETLKELIQNIFELNEE
Ga0209092_1006015553300027833MarineMNKNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYVNNNPYMKPKEMTEETLKELIQNIFELNEE
Ga0228608_105055013300028136SeawaterKFPNSKRKLSDEEEKIIRVSANLIHNTYINANPFIKPKEMTEETLKELIQNIFELNEE
Ga0257114_1009706133300028196MarineMNKNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYINSNPYIKPKKMTEETLKELIQNIFELNEE
Ga0256413_112789623300028282SeawaterMNKNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYINANPFIKPKEMTEETLKELIQNIFELNEE
Ga0228627_104487223300028414SeawaterMNFXDNMSKDIIKFPNSKRKLSDEEEKFIRVSANVIHNTYINASPFIKPKDVTEETLKELIQSIFELNEE
Ga0308021_1005489223300031141MarineMMKKNVIKFPNSKRKLSLEEEKLVNVSANLIHNAYVNASPFLKPKEMTEETLKELIHNIFELNEE
Ga0308022_117256823300031142MarineMIKKNVIKFPNSKRKLSLEEEKLVNVSANLIHNAYVNASPFIKPKEMTEETLKELIHNIFELNEE
Ga0308023_108011623300031167MarineIKFPNSKRKLSLEEEKLVNVSANLIHNAYVNANPFLKPKEMTEETLKELIHNIFELNEE
Ga0308010_120732623300031510MarineVIKFPNSKRKLSLEEEKLVNVSANLIHNAYVNASPFIKPKEMTEETLKELIHNIFELNEE
Ga0308007_1014412413300031599MarineMSKDIIKFPNSKRKLSDEEEKFIRVSANVIHNTYVNASPFVKPKDVTEETLKELIQSIFELN
Ga0308009_1000370373300031612MarineMMKKNVIKFPNSKRKLSLEEEKLVNVSANLIHNAYVNASPFIKPKEMTEETLKELIHNIFELIEE
Ga0308009_1018683233300031612MarineDNMSRNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYINTNPFIKPKEMTEETLKELIQNIFELNEE
Ga0308014_102692213300031628MarineKNVIKFPNSKRKLSLEEEKLVNVSANLIHNAYVNASPFIKPKEMTEETLKELIHNIFELNEE
Ga0308004_1004023333300031630MarineMKKNVIKFPNSKRKLSLEEEKLVNVSANLIHNTYTNASPFVKPKEMTEETLKELIHNIFELNED
Ga0308001_1006299643300031644MarineVFKMMKKNVIKFPNSKRKLSLEEEKLVNVSANLIHNAYVNASPFIKPKEMTEETLKELIHNIFELNEE
Ga0308018_1007571033300031655MarineMSRNIIKFPNSKRKLSDEEEKIIRVSANLIHNTYINTNPFIKPKEMTEETLKELIQN
Ga0307984_104156723300031658MarineMKKNVIKFPNSKRKLSLEEEKLVNVSANLIHNTYTNASPFVKPKEMTEETLKELIHNIFELNEE
Ga0307984_120552223300031658MarineMNKNIIKFPNSKRKLSDEEEKIIRVSANLIHNSYTGPNMYIKPKKMTEETLKELIQNIFELNEE
Ga0308011_1005750113300031688MarineNVIKFPNSKRKLSLEEEKLVNVSANLIHNAYVNASPFIKPKEMTEETLKELIHNIFELNE
Ga0308011_1007466733300031688MarineFKMMKKNVIKFPNSKRKLSLEEEKLVNVSANLIHNAYVNASPFIKPKEMTEETLKELIHNIFELNEE
Ga0308011_1011926713300031688MarineKFPNSKRKLSLEEEKLVNVSANLIHNAYVNANPFLKPKEMTEETLKELIHNIFELNEE
Ga0308011_1020860413300031688MarineMSKNVIKFPNSKRKLTNEEEKIIRQSANLIHNTYINNNPFIKPKEMTEETLKELIQD
Ga0307995_120363523300031696MarineMRKNVIKFPNSKRKLSDEEEKLVHVSANLIHNTYINASPFVKPKEMTEETLKELIHNIFELNEE
Ga0308002_101384013300031703MarineMSKDIIKFPNSKRKLSDEEEKFIRVSANVIHNTYVNASPFVKPKDVTEETLKELIQSIF
Ga0308000_1038159613300031848MarineNVIKFPNSKRKLTNEEEKIIRQSANLIHNTYSNNNPFIKPKEMTEETLKELIQDIFELNE


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