Metagenome Family F084752

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084752
Family Type	Metagenome
Number of Sequences	112
Average Sequence Length	90 residues
Representative Sequence	MVTVSAETALSSSPDEIWTALGRRNTYFYFPGIAPATGKGGGPLAHALDLPIVDRQEQTATLSVGRAGRNGRRERRFTLRGELVT
Number of Associated Samples	109
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.21 %
% of genes near scaffold ends (potentially truncated)	97.32 %
% of genes from short scaffolds (< 2000 bps)	85.71 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (90.179 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (11.607 % of family members)
Environment Ontology (ENVO)	Unclassified (36.607 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (41.964 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 6.19% β-sheet: 30.09% Coil/Unstructured: 63.72%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF01425	Amidase	44.64
PF12697	Abhydrolase_6	1.79
PF07690	MFS_1	1.79
PF13193	AMP-binding_C	1.79
PF00378	ECH_1	1.79
PF10604	Polyketide_cyc2	0.89
PF05721	PhyH	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	44.64
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.18 %
Unclassified	root	N/A	9.82 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.18 %
Unclassified	root	N/A	9.82 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.18 %
Unclassified	root	N/A	9.82 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	79.46 %
Unclassified	root	N/A	9.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.36 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	79.46 %
Unclassified	root	N/A	9.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.57 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	79.46 %
Unclassified	root	N/A	9.82 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.79 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	77.68 %
Unclassified	root	N/A	9.82 %
Reyranellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	77.68 %
Unclassified	root	N/A	9.82 %
Reyranella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella	0.89 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	77.68 %
Unclassified	root	N/A	9.82 %
unclassified Reyranella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → unclassified Reyranella	0.89 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	77.68 %
Unclassified	root	N/A	9.82 %
Reyranella sp. CPCC 100927	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → unclassified Reyranella → Reyranella sp. CPCC 100927	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16743138	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1396	Open in IMG/M
2170459004\|F62QY1Z01EJVVM	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	511	Open in IMG/M
3300000564\|RepKanNP_BrdU_F12BDRAFT_1018612	Not Available	504	Open in IMG/M
3300000890\|JGI11643J12802_12240185	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1189	Open in IMG/M
3300000891\|JGI10214J12806_10917658	Not Available	557	Open in IMG/M
3300000955\|JGI1027J12803_104864988	Not Available	521	Open in IMG/M
3300000956\|JGI10216J12902_124153906	Not Available	508	Open in IMG/M
3300001661\|JGI12053J15887_10220912	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	953	Open in IMG/M
3300002914\|JGI25617J43924_10294296	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	558	Open in IMG/M
3300004633\|Ga0066395_10999645	Not Available	510	Open in IMG/M
3300005293\|Ga0065715_10793942	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	613	Open in IMG/M
3300005334\|Ga0068869_101596940	Not Available	581	Open in IMG/M
3300005335\|Ga0070666_10727632	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	728	Open in IMG/M
3300005345\|Ga0070692_10286325	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1001	Open in IMG/M
3300005445\|Ga0070708_100203414	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1854	Open in IMG/M
3300005468\|Ga0070707_100198705	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1954	Open in IMG/M
3300005471\|Ga0070698_100017393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7577	Open in IMG/M
3300005526\|Ga0073909_10200183	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	863	Open in IMG/M
3300005546\|Ga0070696_101101042	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	668	Open in IMG/M
3300005618\|Ga0068864_101932634	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	596	Open in IMG/M
3300005713\|Ga0066905_101357989	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	642	Open in IMG/M
3300005841\|Ga0068863_100052978	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3845	Open in IMG/M
3300005878\|Ga0075297_1015173	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	785	Open in IMG/M
3300006057\|Ga0075026_100504800	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	697	Open in IMG/M
3300006163\|Ga0070715_10934908	Not Available	536	Open in IMG/M
3300006755\|Ga0079222_11252181	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	670	Open in IMG/M
3300006804\|Ga0079221_11119024	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	604	Open in IMG/M
3300006871\|Ga0075434_100062847	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3696	Open in IMG/M
3300006881\|Ga0068865_100740651	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	843	Open in IMG/M
3300006903\|Ga0075426_10016414	All Organisms → cellular organisms → Bacteria → Proteobacteria	5283	Open in IMG/M
3300006904\|Ga0075424_100375435	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1515	Open in IMG/M
3300006904\|Ga0075424_100842096	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	978	Open in IMG/M
3300006914\|Ga0075436_100069656	All Organisms → cellular organisms → Bacteria	2430	Open in IMG/M
3300009093\|Ga0105240_11004889	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	892	Open in IMG/M
3300009100\|Ga0075418_11801526	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	666	Open in IMG/M
3300009174\|Ga0105241_10591649	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1001	Open in IMG/M
3300009545\|Ga0105237_10217027	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1913	Open in IMG/M
3300010046\|Ga0126384_10203911	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1568	Open in IMG/M
3300010047\|Ga0126382_10811444	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	799	Open in IMG/M
3300010362\|Ga0126377_10085842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → unclassified Reyranella → Reyranella sp. CPCC 100927	2837	Open in IMG/M
3300010366\|Ga0126379_13135065	Not Available	553	Open in IMG/M
3300010403\|Ga0134123_12452617	Not Available	587	Open in IMG/M
3300011119\|Ga0105246_10137148	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1835	Open in IMG/M
3300012199\|Ga0137383_10644018	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	775	Open in IMG/M
3300012200\|Ga0137382_10880568	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	645	Open in IMG/M
3300012205\|Ga0137362_10775414	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	822	Open in IMG/M
3300012209\|Ga0137379_10570093	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1039	Open in IMG/M
3300012362\|Ga0137361_10009778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6784	Open in IMG/M
3300012927\|Ga0137416_10422379	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1134	Open in IMG/M
3300012951\|Ga0164300_10267297	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	877	Open in IMG/M
3300012957\|Ga0164303_10368615	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	875	Open in IMG/M
3300012984\|Ga0164309_10474943	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	951	Open in IMG/M
3300013308\|Ga0157375_13610995	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	515	Open in IMG/M
3300014325\|Ga0163163_10040461	All Organisms → cellular organisms → Bacteria → Proteobacteria	4551	Open in IMG/M
3300014497\|Ga0182008_10283088	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	863	Open in IMG/M
3300015077\|Ga0173483_10905886	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	520	Open in IMG/M
3300017927\|Ga0187824_10087496	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	993	Open in IMG/M
3300017936\|Ga0187821_10490530	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	513	Open in IMG/M
3300017959\|Ga0187779_10736996	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	669	Open in IMG/M
3300018032\|Ga0187788_10104215	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1028	Open in IMG/M
3300019361\|Ga0173482_10412897	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	631	Open in IMG/M
3300019880\|Ga0193712_1095533	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	643	Open in IMG/M
3300020060\|Ga0193717_1170890	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	618	Open in IMG/M
3300020170\|Ga0179594_10361151	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	551	Open in IMG/M
3300020579\|Ga0210407_10028115	All Organisms → cellular organisms → Bacteria	4182	Open in IMG/M
3300021404\|Ga0210389_10583553	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	879	Open in IMG/M
3300024224\|Ga0247673_1041806	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	644	Open in IMG/M
3300025910\|Ga0207684_10030949	All Organisms → cellular organisms → Bacteria	4554	Open in IMG/M
3300025922\|Ga0207646_10272196	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1531	Open in IMG/M
3300025922\|Ga0207646_10793540	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	844	Open in IMG/M
3300025923\|Ga0207681_10896442	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	743	Open in IMG/M
3300025934\|Ga0207686_10485296	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	956	Open in IMG/M
3300025941\|Ga0207711_12145681	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	501	Open in IMG/M
3300025961\|Ga0207712_10078426	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2397	Open in IMG/M
3300026025\|Ga0208778_1023106	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	615	Open in IMG/M
3300026088\|Ga0207641_11065576	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	806	Open in IMG/M
3300026088\|Ga0207641_11463232	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	684	Open in IMG/M
3300026356\|Ga0257150_1019631	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	946	Open in IMG/M
3300026361\|Ga0257176_1005587	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1475	Open in IMG/M
3300026369\|Ga0257152_1001743	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2083	Open in IMG/M
3300026374\|Ga0257146_1038071	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	780	Open in IMG/M
3300026376\|Ga0257167_1003141	All Organisms → cellular organisms → Bacteria	1834	Open in IMG/M
3300026446\|Ga0257178_1000987	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2167	Open in IMG/M
3300026475\|Ga0257147_1010373	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1227	Open in IMG/M
3300026960\|Ga0207582_1018165	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	653	Open in IMG/M
3300027424\|Ga0209984_1038362	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	687	Open in IMG/M
3300027603\|Ga0209331_1156404	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	538	Open in IMG/M
3300027616\|Ga0209106_1065531	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	814	Open in IMG/M
3300027633\|Ga0208988_1162373	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	533	Open in IMG/M
3300027717\|Ga0209998_10049340	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	971	Open in IMG/M
3300027821\|Ga0209811_10101738	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1033	Open in IMG/M
3300027846\|Ga0209180_10578044	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	623	Open in IMG/M
3300027874\|Ga0209465_10428519	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	662	Open in IMG/M
3300027875\|Ga0209283_10051336	All Organisms → cellular organisms → Bacteria	2627	Open in IMG/M
3300027876\|Ga0209974_10446928	Not Available	512	Open in IMG/M
3300027915\|Ga0209069_10674324	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	604	Open in IMG/M
3300028536\|Ga0137415_10229616	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1668	Open in IMG/M
3300028771\|Ga0307320_10443816	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	523	Open in IMG/M
3300028792\|Ga0307504_10426150	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	527	Open in IMG/M
3300028811\|Ga0307292_10290862	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	683	Open in IMG/M
3300028812\|Ga0247825_10557665	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	818	Open in IMG/M
3300028885\|Ga0307304_10497253	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	558	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1069970	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	747	Open in IMG/M
3300031716\|Ga0310813_11837618	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	569	Open in IMG/M
3300031858\|Ga0310892_10337925	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	962	Open in IMG/M
3300031949\|Ga0214473_10140905	All Organisms → cellular organisms → Bacteria	2807	Open in IMG/M
3300031962\|Ga0307479_10777184	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	934	Open in IMG/M
3300032179\|Ga0310889_10489545	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	622	Open in IMG/M
3300032180\|Ga0307471_100393203	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1511	Open in IMG/M
3300032828\|Ga0335080_11894486	Not Available	580	Open in IMG/M
3300032897\|Ga0335071_10885403	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	841	Open in IMG/M
3300033412\|Ga0310810_10042612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5542	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.00%
Host-Associated	Host-Associated	25.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.43%
Plants	Host-Associated → Plants	25.00%
Aquatic	Environmental → Aquatic	3.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.18%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.93%
Freshwater	Environmental → Aquatic → Freshwater	1.79%
Sediment	Environmental → Aquatic → Sediment	1.79%
Roots	Host-Associated → Plants → Roots	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.00%
Loam	Environmental → Terrestrial → Soil → Loam	15.18%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.39%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.04%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.36%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.79%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.79%
Sand	Environmental → Terrestrial → Soil → Sand	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.89%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.39%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.04%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.04%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.25%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.25%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.36%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.68%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.68%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.79%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.89%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.89%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.89%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.61%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.04%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.68%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.68%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.79%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.79%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.79%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.79%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.79%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.89%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.89%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2170459004	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm (2)	Environmental	Open in IMG/M
3300000564	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005878	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_104	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019880	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a1	Environmental	Open in IMG/M
3300020060	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300024224	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK14	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026025	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103 (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026356	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-A	Environmental	Open in IMG/M
3300026361	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-B	Environmental	Open in IMG/M
3300026369	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-A	Environmental	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300026376	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-B	Environmental	Open in IMG/M
3300026446	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-B	Environmental	Open in IMG/M
3300026475	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-A	Environmental	Open in IMG/M
3300026960	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A5-10 (SPAdes)	Environmental	Open in IMG/M
3300027424	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03232150	2088090014	Soil	MVTATAETHLSFSVDDAWTALGRRTTYLYFPGVTAGNRTPRGALHHALDLPIVDRQEQTATLTVSRAGKGGRRERRFTM
E4B_08106210	2170459004	Grass Soil	MVTVSAETALSSSPDEIWTALGRRNTYFYFPGIAPATGKAGGPLAHVLDLPIVDRQEQTATLSVGRAGRSGRRERRFTLRGALVTVAGRWQLEP
RepKanNP_BrdU_F12BDRAFT_10186122	3300000564	Soil	MVTATAETHLSFSVDDAWTALGRRTTYLYFPGVTAGNRTPRGALHHALDLPIVDRQEQTATLTVSRAGKGGRR
JGI11643J12802_122401852	3300000890	Soil	RQGADADRASGLSGEMVTATAETHLSFSVDDAWTALGRRTTYLYFPGVTAGNRTPRGALHHALDLPIVDRQEQTATLTVSRAGKGGR
JGI10214J12806_109176582	3300000891	Soil	MVTVTAETSSSSSLDDAWAALGRRATYFYFPGVSRSPSGATLDHALDLPIVDRQEQVATLRIDRPSRPSPLEGRGQG
JGI1027J12803_1048649882	3300000955	Soil	MVTVTAETSLSSPLDDAWTALGRRATYLHFPGVRPGAGTARGALSHELDLPIVDRQAQTATLTVSRAGKNGHERRFTIRGRRVTIAGCWRL
JGI10216J12902_1241539062	3300000956	Soil	MVTATAETDLSFSVEDAWTALGRRTTYLFFPGVTAGNGTSRGMLHHTLDLPIVDRQEQTATLTVSRAGKD
JGI12053J15887_102209121	3300001661	Forest Soil	MVTVTAETFLSSSVEDAWTALGRRATYLYFPGVTAGNGTPPGALHHELDLPIVDRQEQTATLTVSRAG
JGI25617J43924_102942962	3300002914	Grasslands Soil	MVTVSAETALSSSPDEIWTALGRRNTYFYFPGIAPATGKGGGPLAHALDLPIVDRLEQTATLS
Ga0066395_109996452	3300004633	Tropical Forest Soil	MITVTAETTLSSSLDDTWTALGRRATYLSFPGISAPPAEAGVPRAALRHELDLPIVDRQEQTATLSVRRAGRTRERRFA
Ga0065715_107939422	3300005293	Miscanthus Rhizosphere	MVTVTVETSVSSRLEAIWTALGRRPTYFYFPGISGTAKTGPLAHVLDLPIVDRQEQTATLIVKRAPAGDHRERRFGLRGPLVSIAGRWELTPDDDGVRVRLTLDYEIA
Ga0068869_1015969402	3300005334	Miscanthus Rhizosphere	MVTVTAETSLSSSLDDAWVALGRRDAYLCFPGIARPVGSGSGKALHHALDLPIVDRQEQTAMLTVGRAGKNGRRERRFTLRGEL
Ga0070666_107276321	3300005335	Switchgrass Rhizosphere	MVTVTVETSVSSRLEAIWTALGRRPTYFYFPGISGAEKTGPLAHVLDLPIVDRQEQTATLIVKRAPAGDHRERRFGLRGPLVSIAGRWELTPDDDGVRVRLT
Ga0070692_102863251	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MVTATAQTHLSFSVEDAWTALGRRATYLCFPGVTAGNETPHGTLHHALDLPIVDGQEQTATLTVSRAGKNGRRERCFAMRGPLVTIAGHWRLEPGPDGVRVQLTLEYEVAPPLKT
Ga0070708_1002034142	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MVTVSAETAISSSLDEIWTALGRRNTYFYFPGIAPATGKAGGPLAHALDLPIVDRQEQTATLSVGRAGRSGRRERRFTLRGALVTVAGRWQLEPGDAEVRVRLTLDY
Ga0070707_1001987052	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MVTVSAETAMSSSLDEIWTALGRRNTYFYFPGIAPATGKAGGPLAHALDLPIVDRQEQTATLSVGRAGRSGRRERRFTLRGALVTVAGRWQLEPGDAEVRVRLTLDY
Ga0070698_1000173937	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MVTVSAETAISSSLDEIWTALGRRNTYFYFPGIAPATGKAGGPLAHALDLPIVDRQEQTATLSVGRAGRSGRRERRFTLRGALVTVAGRWQLEPGDAEVRVRLT
Ga0073909_102001832	3300005526	Surface Soil	MVTVTAETSLSSSLDGAWVALGRRETYLSFPGIAPRAGSASTKALDHALDLPIVDRQEQTATLTVGRSGKNGHRERRF
Ga0070696_1011010421	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MVTVTAETSWSSSLDDAWVALGRRDTYFDFPGIAPRAGSGSMRTLDHALDLPIVDRQEQTATLAVGRAGKNGHRERRFTLRGELV
Ga0068864_1019326342	3300005618	Switchgrass Rhizosphere	MVTVTAETSLSSSLDDAWVALGRRDTYLHFPGISRPVGSGSGEALDHALDVPIVDRQAQTAALTIGRAGKNG
Ga0066905_1013579892	3300005713	Tropical Forest Soil	MDYSEPDPREMVTATAEAHLSFSVEDAWTALGRRTTYLFFPGVTAGNETPRGTLRHALDLPIVEGQEQTARLTVSRAGKNGRRERRFAMRGPLVTITGRWRLEPGLDGV
Ga0068863_1000529781	3300005841	Switchgrass Rhizosphere	MVTVTVETSVSSRLEAIWTALGRRPTYFYFPGISGTAKTGPLAHVLDLPIVDRQEQTATLIVKRAPAGDHRERRFGLRGPLVSIAGRWELTPDDDGVRVRLTLDYEIAPD
Ga0075297_10151732	3300005878	Rice Paddy Soil	MVTVTAETAVSSSVEETWTALGRRHTYFYFPGITPTSARGGGPLAHALDLPIVDRQEQTTTLSVGRAGRNARRERRFTLRG
Ga0075026_1005048002	3300006057	Watersheds	MVTVSAETSVSSSLDETWTALGRRNTYFYFPGIAPATGKGGGPLAHALDLPIVDRQEQTATLSVGRAGRSGRRERRFTLRGALVTVAGRWQLEPGDVAVRVR
Ga0070715_109349081	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MVTVTAETAVSSSLDETWTALGRRNTYFYFPGVTPATARAAGRLPHALDLPIVDRQEQAATLSVGRAGKSGHRER
Ga0079222_112521811	3300006755	Agricultural Soil	MVTVTAETAVSSSLDETWTALGRRDTYFYFPGVAPPAARGGRLAHALDLPIVDRQEQTATLSVGRTGRDGRRERRFTLRGPLVKVAGR
Ga0079221_111190241	3300006804	Agricultural Soil	MVTVTAETAVSSSLDETWTALGRRNTYFYFPGVTPATARAAGPLPHALDLPIVDRQEQAATLSVGRAGKSGHRERRFTLRGALVTIAGRWQLEPGDA
Ga0075434_1000628471	3300006871	Populus Rhizosphere	MVTVTVETSVSSRLEAIWTALGRRPTYFYFPGISGAEKTGPLAHVLDLPIVDRQEQTATLIVKRAPAGDHRERRFGLRGPLVSIAGRWELTPDDDG
Ga0068865_1007406511	3300006881	Miscanthus Rhizosphere	MVTVTVETSVSSRLEAIWTALGRRPTYFYFPGISGTAKTGPLAHVLDLPIVDRQEQTATLIVKRAPAGDHRERRFGLRGPLVSIAGRWELTPDDDGVRVRLTLDYEIAPDLKALAVNTLRSRSPLPIRTD
Ga0075426_100164141	3300006903	Populus Rhizosphere	MVTVTVETSVSSRLEAIWTALGRRPTYFYFPGISGTAKTGPLAHVLDLPIVDRQEQTATLIVKRAPAGDHRERRFG
Ga0075424_1003754351	3300006904	Populus Rhizosphere	MVTATAETHLSFSVDDAWTALGRRTTYLYFPGVTAGNRTPRGALHHALDLPIVDRQEQTATLTVSRAGKGGRRERRFTMRGPLVTISGRWGLEPGPDGVRVQL
Ga0075424_1008420961	3300006904	Populus Rhizosphere	MVTVTVETSVSSRLEAIWTALGRRPTYFYFPGISGTAKTGPLAHVLDLPIVDRQEQTATLIVKRAPAGDHRERRFGL
Ga0075436_1000696561	3300006914	Populus Rhizosphere	MVTVTVETSVSSRLEAIWTALGRRPTYFYFPGISGTAKTGPLAHVLDLPIVDRQEQTATLIVKRAPAGDHRERRFGLRGPLVSIAGRWELTPDDDGVRVRLTLDYEIAPDLKALAVNTLRSRSPLPIRTDADAI
Ga0105240_110048892	3300009093	Corn Rhizosphere	MVTVTVETSVSSRLEAIWTALGRRPTYFYFPGISGTAKTGPLAHVLDLPIVDRQEQTATLIVKRAPAGDHRERRFGLRGPLVSIAGRWELTPDD
Ga0075418_118015261	3300009100	Populus Rhizosphere	MVTATAQTHLSFSVEDAWTALGRRATYLCFPGVTAGNETPHGTLHHALDLPIVDGQEQTATLTVSRAGKNGRRERCFAMRGPLVTIAGHWRLEPGPDGVRVQL
Ga0105241_105916492	3300009174	Corn Rhizosphere	MVTATAETHLSFSVDDAWTALGRRTTYLDFPGMTAGNGTPRGTFHHALDLPIVDRQEQTATLTVSRTGKDGRER
Ga0105237_102170272	3300009545	Corn Rhizosphere	MVTVTVETSVSSRLEAIWTALGRRPTYFYFPGISGTAKTGPLAHVLDLPIVDRQEQTATLIVKRAPAGDHRERRFGLRGPLVSIAGRWELTPDDDGVRVRLTLDY
Ga0126384_102039111	3300010046	Tropical Forest Soil	MVTATAETHLSCSVEDVWTALGRRTTYLFFPGVTAGNETPRGTLHHALDLPILDGQEQTATLTVSRAGKNGRRERRFAMRG
Ga0126382_108114441	3300010047	Tropical Forest Soil	MVTVTAEMSWSSSADDASVALGQRATYLCFPGISARGARARTLDHALDLPIVDRQRQTAALTVERPRGKGTRERRFALRGDLVAIAGC
Ga0126377_100858421	3300010362	Tropical Forest Soil	MVTATAETHLSFSVEDAWTALGRRTTYLFFPGVTAGNATPRGTLHHALDLPIVDRQEQTATLTVSRAGKD
Ga0126379_131350651	3300010366	Tropical Forest Soil	MVTVTAEMSWSSSADDASVALGQRATYLCFPGISARGARARTLDHALDLPIVDPQRQTAALTVGRPRGKKTRERRFALRGDLVAIAGCWRLEPLDAGD
Ga0134123_124526172	3300010403	Terrestrial Soil	MVTVTAETSLSSSLDDAWVALGRHETYLHFPGIARRVGSGSGRTLDHALDLPIVDPQEQTATLTIGRAGKNGP
Ga0105246_101371482	3300011119	Miscanthus Rhizosphere	MVTVTVETSVSSRLEAIWTALGRRPTYFYFPGISGTAKTGPLAHVLDLPIVDRQEQTATLIVKRAPAGDHRERRFGLRGPLV
Ga0137383_106440182	3300012199	Vadose Zone Soil	MVTVSAETALSSSPDEIWTALGRRNTYFYFPGIAPATGKGGGPLAHVLDLPIVDRQEQTATLSVGRA
Ga0137382_108805681	3300012200	Vadose Zone Soil	MVTVSAETALSSSPDEIWTALGRRNTYFYFPGIAPATGKGGGPLAHVLDLPIVDRQEQTATLSVGRAARNGPRERRFTLRGELVTVAGCWQLEPGDAAVRVRLTLDYEIAPEL
Ga0137362_107754142	3300012205	Vadose Zone Soil	MVTVSAETAMSSSLDEIWTALGRRNTYFYFPGIAPATGKAGGPLAHALDLPIVDRQEQTATLSVGRAGRSGRRERRFTLRGALVTVAGRWQLEPGDAEVRVRL
Ga0137379_105700931	3300012209	Vadose Zone Soil	MVTVSAETALSSSPDEIWTALGRRNTYFYFPGIAPATGKGGGPLAHVLDLPIVDRQEQTATLSVGRAARNGRRERRFTLRGELVTVAGCWQLEPGDAAVR
Ga0137361_100097787	3300012362	Vadose Zone Soil	MVTVSAETAMSSSLDEIWTALGRRNTYFYFPGIAPATGKAGGPLAHVLDLPIVDRQEQTATLSVGRAGRSGRRERRFTLRGALVTVAGRWQLEPGDAKVRVRLTLDYEIAPDLKT
Ga0137416_104223791	3300012927	Vadose Zone Soil	MVTVTAETFLSSSVEDAWTALGRRATYLYFPGVTAGNGTPPGALHHELDLPIVDRQEQTTTLTVSRAGKDGRRERRFTMRGPLVTISGRWRLEPGPDG
Ga0164300_102672971	3300012951	Soil	MVTVTVETSVSSRLEAIWTALGRRPTYFYFPGISGAEKTGPLAHVLDLPIVDRQEQTATLIVKRAPAGDHRERRF
Ga0164303_103686152	3300012957	Soil	MVTVTVETSVSSRLEAIWTALGRRPTYFYFPGISGAEKTGPLAHVLDLPIVDRQEQTATLIVKRAAAGDHRERRFGLRGPLVSIAGRWELTPDDDGVRVRLTL
Ga0164309_104749432	3300012984	Soil	MVTVSAETALSSSPDEIWTALGRRNTYFYFPGIAPATGKAGGPLAHVLDLPIVDRQEQTATLSVGR
Ga0157375_136109951	3300013308	Miscanthus Rhizosphere	MVTVTAETSLSSSLDDAWVALGRRATYFDFPGIAPRVGSASGKTLDHTLDLPIVDRQEQTSTLTVGRAGKNGHRERRFTLRGELATITGRWRLEPA
Ga0163163_100404615	3300014325	Switchgrass Rhizosphere	MVTVTVETSVSSRLEAIWTALGRRPTYFYFPGISGTAKTGPLAHVLDLPIVDRQEQTATLIVKRAPAGDHRERRFGLRGPLVSIAGRWELTPDDDGVRVRLTLDYEIAPDLKALAVN
Ga0182008_102830881	3300014497	Rhizosphere	MVTVTVETSVSSRLEAIWTALGRRPTYFYFPGISGTAKTGPLAHVLDLPIVDRQEQTATLIVKRAPAGDHRERRFGLRGPLVSIAGRWELTPDDDGVRVRLTLDYEIAPDLKALA
Ga0173483_109058861	3300015077	Soil	MVTVTVETSVSSRLEAIWTALGRRPTYFYFPGISGTAKTGPLAHVLDLPIVDRQEQTATLIVKRAPAGDHRERRFGLRGPLVSIAGRWELTPDDDGVRVRLTLDYEIAPDLKALAVNTLRSRS
Ga0187824_100874962	3300017927	Freshwater Sediment	MVTVTAETAVSSSLDETWTALGRRDTYFYFPGVAPPAARGGRLAHALDLPIVDRQEQTATLSVGRTGRDGRRERRFTLRGPLV
Ga0187821_104905301	3300017936	Freshwater Sediment	MVTVTAETAVSSSVEEAWTALGRRHTYFYFPGITPTTARGGGPLAHALDLPIVDRQEQTTTLSVGRAGRNGRRERRFTLRGNLVTIAGR
Ga0187779_107369961	3300017959	Tropical Peatland	MVTVTAETSLSSSLDDAWLALGRRATYFYFPGLAPAAGDASGKARGALCHQLDLPIVDRQEQSAVLTVARAGKA
Ga0187788_101042152	3300018032	Tropical Peatland	MVTVTAETSLPSSLDDAWAALGRRDTYFYFPGIAPRAGARATKILDHALDLPIVDRQEQAATLTVGRAGRNGHRERRFT
Ga0173482_104128972	3300019361	Soil	MVTVTVETSVSSRLEAIWTALGRRPTYFYFPGISGTAKTGPLAHVLDLPIVDRQEQTATLIVKRAPAGDHRERRFGLRGPLVSIAGRWELTPDDDGVRVRLTLDYEIAPDLKALAVNTLRSRSP
Ga0193712_10955332	3300019880	Soil	MVTVSAETSISSSLDETWTALGRRSTYFYFPGIAPAPGKGGGPLAHALELPIVDRQEQTATLAVGRAGRS
Ga0193717_11708901	3300020060	Soil	MVTVTAETSLSSSLDDVWVALGRREAYLSFPGITRRVGSGSGNVLDHALDLPIVDRQEQTVTLRVGRPGKNGHRERRFTLRGELVTITGRWRLEPAGAGVRVHL
Ga0179594_103611511	3300020170	Vadose Zone Soil	MVTVTAETFLSSSVEDAWTALGRRATYLYFPGVTAGNGTPPGALHHELDLPIVDRQEQTTTLTVSRAGKDGRRERRFTMRGPLVTISG
Ga0210407_100281151	3300020579	Soil	MVTVTAETSVSSSLDETWTALGRRNTYFYFPGVTPADTRAAGPLPHALDLPIVDRQEQAATLSVGRAGKAGHRERRFTLRGALVTIAGRWRLE
Ga0210389_105835531	3300021404	Soil	MVTVTAETSVSSSLDETWTALGRRNTYFYFPGVTPADTRAAGPLPHALDLPIVDRQEQAATLSVGRAGKAGHRERRFTLRGALVTIAGRWQLEPDDAGVRVRLTLDYE
Ga0247673_10418062	3300024224	Soil	MVTVSAETSVSSSLDETWTALGRRNTYFYFPGIAPPPGKGTGKGAGPLAHTLDLPIVNRQEQASTLSVGRAGKAGHR
Ga0207684_100309491	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MVTVSAETAISSSLDEIWTALGRRNTYFYFPGIAPATGKAGGPLAHALDLPIVDRQEQTATLSVGRAGRSGRRERRFTLRGALVTVAGRWQLEPGDAEVRVRLTL
Ga0207646_102721961	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MVTVSAETALSSSPDEIWTALGRRNTYFYFPGIAPATGKGGGPLAHVLDLPIVDRQEQTATLSVGRAARNGRRERRFTLRGELVTVAGCWQ
Ga0207646_107935402	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MVTVSAETAISSSLDEIWTALGRRNTYFYFPGIAPATGKAGGPLAHALDLPIVDRQEQTATLSVGRAGRSGRRERRFTLRGALVTVAGRWQLEPGDAEVRVRLTLDYEI
Ga0207681_108964421	3300025923	Switchgrass Rhizosphere	MVTVTAETSLSSSPDDAWVALGRRETYFSFPGIARRAGSGSGTTLDHALDLPIVDRQEQTATLTVGRAGKNGHRERRFTLRGELVTIIGRWRIE
Ga0207686_104852961	3300025934	Miscanthus Rhizosphere	MVTATAETHLSFSVDDAWTALGRRTTYLDFPGMTAGNGTPRGTFHHALDLPIVDRQEQTATLIVKRAPAGDHRERRFGLRGPLVSIAGRWELTPDD
Ga0207711_121456811	3300025941	Switchgrass Rhizosphere	MVTVTAETSWSSSLDDAWVALGRRDTYLDFPGIAPRVGSGSVRTLDHALDLPIVDRQEQTATLTVGRAGKDGHRERRFTLRGELVTITG
Ga0207712_100784261	3300025961	Switchgrass Rhizosphere	MVTVTAETSLSSSLDDAWVALGRHETYLHFPGIARRVGSGSGRTLDHALDLPIVDPQEQTATLTIGRAGKNGPRERRFTLRGELV
Ga0208778_10231061	3300026025	Rice Paddy Soil	MVTVTAETAVSSSVEETWTALGRRHTYFYFPGITPTSARGGGPLAHALDLPIVDRQEQTTTLSVGRAGRNGRRERRFTLRGDLVTIAGRWQLEPGDAGVRVRL
Ga0207641_110655762	3300026088	Switchgrass Rhizosphere	MVTVTAETSLSSSVDDAWVALGRRATYFDFPGIAPRVGSGSGKTLDHALDLPIVDRQEQTVTLTIGRSGKDGHQERRFTLR
Ga0207641_114632321	3300026088	Switchgrass Rhizosphere	MVTVTVETSVSSRLEAIWTALGRRPTYFYFPGISGTAKTGPLAHVLDLPIVDRQEQTATLIVKRAPAGDHRERRFGLRGPLVSIAGRWELTPDDDGVRVRLTLDYEIAPDLKAL
Ga0257150_10196312	3300026356	Soil	MVTVSAETAMSSSPDEIWTALGRRNTYFYFPGIAPATGKAGGPLAHALDLPIVDRQEQTATLSVGRAGRSGRRERRFTLRGALVTVAG
Ga0257176_10055871	3300026361	Soil	MVTVSAETALSSSPDEIWTALGRRNTYFYFPGIAPATGKAGGPLAHALDLPIVDRQEQTATLSVGRAGRSGRRER
Ga0257152_10017432	3300026369	Soil	MVTVSAETAMSSSLDEIWTALGRRNTYFYFPGIAPATGKAGGPLAHALDLPIVDRQEQTATLSVGRAGRSGRRERRFTLRGALVTVAGRWQLEPGDAEVRVR
Ga0257146_10380711	3300026374	Soil	MVTVSAETAMSSSLDEIWTALGRRNTYFYFPGIAPATGKAGGPLAHALDLPIVDRQEQTATLSVGRAGRSGR
Ga0257167_10031411	3300026376	Soil	MVTVSAETAMSSSLDEIWTALGRRNTYFYFPGIAPATGKAGGPLAHALDLPIVDRQEQTATLSVGRAGRSG
Ga0257178_10009871	3300026446	Soil	MVTVSAETALSSSPDEIWTALGRRNTYFYFPGIAPATGKAGGPLAHALDLPIVDRQEQTATLSVGRAGRSGRRERRFTLRGALVTVAGRWQLEPGDAEVRVRLTLDYE
Ga0257147_10103731	3300026475	Soil	MVTVSAETAMSSSLDEIWTALGRRNTYFYFPGIAPATGKAGGPLAHALDLPIVDRQEQTATLSVGRAGRSGRRERRFTLRGALVTVAGRWQLEPGDAEVRVRLTLD
Ga0207582_10181651	3300026960	Soil	MVTVTVETSVSSRLEAIWTALGRRPTYFYFPGISGTAKTGPLAHVLDLPIVDRQEQTATLIVKRAPAGDHRERRFGLRGPLVSIAGRWELTPDDDGVRVRLTLDYEIAPDLKALAVNTLR
Ga0209984_10383622	3300027424	Arabidopsis Thaliana Rhizosphere	MVTVTAETSSSSSLDDAWAALGRRATYFYFPGVSRSPSGATLDHALDLPIVDRQEQVATLRIDRPSRPSP
Ga0209331_11564041	3300027603	Forest Soil	MVTVSAETSISSSLDEIWTALGRRNTYFYFPGIAPAPGKGGGPLAHALELPIVNRQEQTATLSVGRAGRSGRRERRFTLRGALVT
Ga0209106_10655312	3300027616	Forest Soil	MVTVTAETFLSSSVEDAWTALGRRATYLYFPGVTAGNGTPPGALHHELDLPIVDRQEQTTTLTVSRAGKDGRRERRFTMRGPLVTISGRWRLEPGPDGVRVRLT
Ga0208988_11623732	3300027633	Forest Soil	MVTVTAETFLSSSVEDAWTALGRRATYLYFPGVTAGNGTPPGALHHELDLPIVDRQEQTITITVSRAGKDGRRERRFTMRGPLVTISGRWRL
Ga0209998_100493402	3300027717	Arabidopsis Thaliana Rhizosphere	MVTVTVETSVSSRLEAIWTALGRRPTYFYFPGISGTAKTGPLAHVLDLPIVDRQEQTATLIVKRAPAGDHRERRFGLRGPLVSIAGRWELTPDDDGVR
Ga0209811_101017382	3300027821	Surface Soil	MVTVTAETSLSSSLDGAWVALGRRETYLSFPGIAPRAGSASTKALDHALDLPIVDRQEQTATLTVGRSGKNGHRERRFR
Ga0209180_105780442	3300027846	Vadose Zone Soil	MVTVSAETALSSSPDEIWTALGRRNTYFYFPGIAPATGKGGGPLAHALDLPIVDRQEQTATLSVGRAGRNGRRERRFTLRGELVT
Ga0209465_104285192	3300027874	Tropical Forest Soil	MVTATAETHLSFSVEDAWTALGRRTTYLFFPGVTAGNGTPRGTLHHALDLPIVDRQEQTATLTVSRVGKDGRRERRFAMRGPLVTISGRWRLEPGADGVRVQLTL
Ga0209283_100513363	3300027875	Vadose Zone Soil	MVTATAETHLSSSMDDAWTVLGRRTTYLYFPGVTAGNGTPRGALHHELDLPIVDRQEQTATLTVSRAGKDGRRERRFTMRGPLMTISGRWRLEPGPDGVRVQLTLDYDI
Ga0209974_104469282	3300027876	Arabidopsis Thaliana Rhizosphere	MVTATAQTHLSFSVEDAWTALGRRATYLCFPGVTAGNETPHGTLHHALDLPIVDGQEQTATLTVSRAGK
Ga0209069_106743242	3300027915	Watersheds	MVTVTAETSLSSSLDDAWIALGRRATYFYFPGITPGAGTSRGALSHELDLPIVDRQAQTATLTVSRAGKNGHRERRF
Ga0137415_102296162	3300028536	Vadose Zone Soil	MVTVTAETFLSSSVEDAWTALGRRATYLYFPGVTAGNGTPPGALHHELDLPIVDRQEQTTTLTVSRAGKDGRR
Ga0307320_104438161	3300028771	Soil	MVTATAETHLSCSVDDAWTALGRRATYLYFPGVSAGNGTAGGALHHEFDLPIVDPQEQTTTLTVSRAGKDGRRERRFTMRGPLVTISGRWRLDP
Ga0307504_104261502	3300028792	Soil	MVTVSAETSISSSLDETWKALGRRSTYFYFPGIAPVTGKAGGPLAHALDLPIVDRQEQTATLSMGRAGRSGQ
Ga0307292_102908622	3300028811	Soil	MVTATAETHLSCSVDDAWTALGRRATYLYFPGISAGNGTAGGALHHELDLPIVDPQEQTTTLTVSRAGKDGRRERRFTMRGPLVTISGR
Ga0247825_105576651	3300028812	Soil	MVTVTVETSVSSRLEAIWTALGRRPTYFYFPGISGAEKTGPLAHVLDLPIVDRQEQTATLIVKRAPAGDHRERRFGLRGPLVSIAGRWELTPDD
Ga0307304_104972532	3300028885	Soil	MVTVSAETSISSSLDEIWTALGRRNTYFYFPGIAPAPGKGGGPLAHALELPVVERQEQTATLSVRRAGRSGRRERRFTLRGALVTVAGRWQLEPGDAA
(restricted) Ga0255311_10699702	3300031150	Sandy Soil	MVTVTAETAVSSSLDETWTALGRRDTYFYFPGVIPATIRGGRLAHALDLPIVDRQEQIATLSVGRTG
Ga0310813_118376182	3300031716	Soil	MVTVSAETSVSSSLDETWTALGRRNTYFYFPGVTPATIRGGRLTHALDLPIVDRQEQTATLSVGRTGRDGRRE
Ga0310892_103379252	3300031858	Soil	MVTATAETHLSFSVDDAWTALGRRTTYLDFPGMTAGNGTPRGTFHHALDLPIVDRQEQTATLTVSRTGKDGRERRFTIRGRLVTISGRWRLEPGPN
Ga0214473_101409051	3300031949	Soil	MVTVTAETSLSSSLDDAWAALGRRATYFYFPGITPGAGTTRGALSHELDLPIVDRQAQTATLTVSRAGKNGRRERRFTMRGE
Ga0307479_107771842	3300031962	Hardwood Forest Soil	MVTVTAEMSLSSSLDDAWMALGRRATYFYFPGLAPVDGERAGKTGRGAFCHALDLPIVDRQEQTATLTVGRPR
Ga0310889_104895451	3300032179	Soil	MVTVTAETAVSSSVEETWTALGRRHTYFYFPGITPTSARGGGPLAHALDLPIVDRQEQTTTLSVGRAGRNGRRERRFTLRGDLVTIAG
Ga0307471_1003932031	3300032180	Hardwood Forest Soil	MVTVSAETAMSSSLDEIWTALGRRNTYFYFPGIAPATGKAGGPLAHALDLPIVDRQEQTATLSVGRAGRSGRRERRFTL
Ga0335080_118944862	3300032828	Soil	MVTATAETHLPFSVEDAWTALGRRMTYLLIPGVTAGNSTPRGTLHHALDLPIVDRQEQTATLTVSRVGKDGRRERRFTLRGPLVT
Ga0335071_108854032	3300032897	Soil	MVTVTVETSLSCSPDDAWVALGRRDTYFYFPGVAPRAGARPGTKLDQALELPIVDRKEQAVSLTVGARDASRCAASS
Ga0310810_100426121	3300033412	Soil	MVTVSAETSVSSSLDETWTALGRRNTYFYFPGVTPATIRGGRLTHALDLPIVDRQEQTATLSVGRTGRDGRRERRFTLRGPLVRVA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters