Metagenome / Metatranscriptome Family F084769

Basic Information
Family ID	F084769
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	65 residues
Representative Sequence	MKKLLTIAFTLLLGASLSFAQAGGGSTDKPAGDKTTTTKSGKKTTHHKGGKKSKKNSGGTTTPPPK
Number of Associated Samples	93
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	86.49 %
% of genes near scaffold ends (potentially truncated)	25.00 %
% of genes from short scaffolds (< 2000 bps)	81.25 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.24

Most Common Taxonomy
Group	Bacteria (54.464 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (16.964 % of family members)
Environment Ontology (ENVO)	Unclassified (25.893 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 15.96% β-sheet: 0.00% Coil/Unstructured: 84.04%
Feature Viewer

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Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF00682	HMGL-like	14.29
PF01546	Peptidase_M20	9.82
PF07687	M20_dimer	3.57
PF04389	Peptidase_M28	2.68
PF09900	DUF2127	1.79
PF07969	Amidohydro_3	1.79
PF00171	Aldedh	0.89
PF00078	RVT_1	0.89
PF01745	IPT	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.89
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.89
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.89

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.46 %
Unclassified	root	N/A	45.54 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.46 %
Unclassified	root	N/A	45.54 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.46 %
Unclassified	root	N/A	45.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.54 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	14.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.54 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	5.36 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.36 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.54 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.36 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.36 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.54 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.36 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.36 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.36 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	4.46 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.54 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.36 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.89 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_120382091	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300002906\|JGI25614J43888_10026010	All Organisms → cellular organisms → Bacteria	1857	Open in IMG/M
3300002917\|JGI25616J43925_10007522	All Organisms → cellular organisms → Bacteria → Proteobacteria	4729	Open in IMG/M
3300004479\|Ga0062595_100034728	All Organisms → cellular organisms → Bacteria → Proteobacteria	2125	Open in IMG/M
3300004479\|Ga0062595_100112706	Not Available	1482	Open in IMG/M
3300004479\|Ga0062595_101485046	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300004799\|Ga0058863_11949464	Not Available	750	Open in IMG/M
3300005186\|Ga0066676_10218890	All Organisms → cellular organisms → Bacteria	1231	Open in IMG/M
3300005329\|Ga0070683_100236163	All Organisms → cellular organisms → Bacteria	1738	Open in IMG/M
3300005329\|Ga0070683_102069459	Not Available	547	Open in IMG/M
3300005336\|Ga0070680_100077384	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2740	Open in IMG/M
3300005344\|Ga0070661_101141397	Not Available	650	Open in IMG/M
3300005434\|Ga0070709_10322180	All Organisms → cellular organisms → Bacteria	1135	Open in IMG/M
3300005434\|Ga0070709_10326567	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M
3300005434\|Ga0070709_10377233	All Organisms → cellular organisms → Bacteria	1053	Open in IMG/M
3300005434\|Ga0070709_11657181	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300005435\|Ga0070714_101270488	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300005436\|Ga0070713_100223581	All Organisms → cellular organisms → Bacteria	1708	Open in IMG/M
3300005436\|Ga0070713_100718225	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300005437\|Ga0070710_10508702	All Organisms → cellular organisms → Bacteria → Proteobacteria	826	Open in IMG/M
3300005439\|Ga0070711_100578482	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300005458\|Ga0070681_10130406	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2446	Open in IMG/M
3300005518\|Ga0070699_100358252	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M
3300005518\|Ga0070699_100753001	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300005533\|Ga0070734_10017371	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	4874	Open in IMG/M
3300005535\|Ga0070684_100021836	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	5332	Open in IMG/M
3300005537\|Ga0070730_10137574	All Organisms → cellular organisms → Bacteria	1665	Open in IMG/M
3300005539\|Ga0068853_100049650	All Organisms → cellular organisms → Bacteria	3606	Open in IMG/M
3300005542\|Ga0070732_10120825	All Organisms → cellular organisms → Bacteria	1552	Open in IMG/M
3300005575\|Ga0066702_10054693	All Organisms → cellular organisms → Bacteria → Proteobacteria	2158	Open in IMG/M
3300005614\|Ga0068856_101255096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	757	Open in IMG/M
3300005650\|Ga0075038_10017381	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300006163\|Ga0070715_10590161	Not Available	650	Open in IMG/M
3300006163\|Ga0070715_10612709	Not Available	640	Open in IMG/M
3300006175\|Ga0070712_100603082	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300006755\|Ga0079222_12556824	Not Available	513	Open in IMG/M
3300006797\|Ga0066659_11571741	Not Available	552	Open in IMG/M
3300006800\|Ga0066660_10168290	All Organisms → cellular organisms → Bacteria	1641	Open in IMG/M
3300006806\|Ga0079220_11112056	Not Available	641	Open in IMG/M
3300006903\|Ga0075426_11553227	Not Available	503	Open in IMG/M
3300007788\|Ga0099795_10434310	Not Available	602	Open in IMG/M
3300009098\|Ga0105245_10001277	All Organisms → cellular organisms → Bacteria	22704	Open in IMG/M
3300009143\|Ga0099792_10215525	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300009174\|Ga0105241_10683988	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300009551\|Ga0105238_10045086	All Organisms → cellular organisms → Bacteria → Acidobacteria	4454	Open in IMG/M
3300010048\|Ga0126373_11804273	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300010159\|Ga0099796_10310150	Not Available	671	Open in IMG/M
3300010358\|Ga0126370_10304258	All Organisms → cellular organisms → Bacteria	1266	Open in IMG/M
3300010359\|Ga0126376_11663767	Not Available	672	Open in IMG/M
3300010371\|Ga0134125_10284842	All Organisms → cellular organisms → Bacteria	1836	Open in IMG/M
3300010373\|Ga0134128_10225961	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2102	Open in IMG/M
3300010373\|Ga0134128_10368503	All Organisms → cellular organisms → Bacteria → Proteobacteria	1605	Open in IMG/M
3300010373\|Ga0134128_11256132	Not Available	817	Open in IMG/M
3300010375\|Ga0105239_12288711	Not Available	629	Open in IMG/M
3300010376\|Ga0126381_100072929	All Organisms → cellular organisms → Bacteria	4290	Open in IMG/M
3300010397\|Ga0134124_11141041	Not Available	797	Open in IMG/M
3300010398\|Ga0126383_10072272	All Organisms → cellular organisms → Bacteria	2973	Open in IMG/M
3300010399\|Ga0134127_11868397	Not Available	677	Open in IMG/M
3300011269\|Ga0137392_10755000	Not Available	804	Open in IMG/M
3300012199\|Ga0137383_10342361	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300012206\|Ga0137380_10139079	All Organisms → cellular organisms → Bacteria	2215	Open in IMG/M
3300012917\|Ga0137395_10335834	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300012923\|Ga0137359_11142356	Not Available	665	Open in IMG/M
3300012925\|Ga0137419_10792503	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	775	Open in IMG/M
3300012955\|Ga0164298_10054460	All Organisms → cellular organisms → Bacteria	1939	Open in IMG/M
3300012957\|Ga0164303_10952095	Not Available	606	Open in IMG/M
3300012960\|Ga0164301_11657052	Not Available	533	Open in IMG/M
3300012961\|Ga0164302_11849500	Not Available	512	Open in IMG/M
3300012984\|Ga0164309_11586129	Not Available	561	Open in IMG/M
3300012989\|Ga0164305_11198045	Not Available	658	Open in IMG/M
3300013307\|Ga0157372_12334702	Not Available	614	Open in IMG/M
3300017927\|Ga0187824_10269011	Not Available	596	Open in IMG/M
3300018468\|Ga0066662_10022363	All Organisms → cellular organisms → Bacteria → Acidobacteria	3578	Open in IMG/M
3300018468\|Ga0066662_10539156	Not Available	1075	Open in IMG/M
3300020579\|Ga0210407_10671453	Not Available	805	Open in IMG/M
3300021560\|Ga0126371_13053933	Not Available	567	Open in IMG/M
3300025321\|Ga0207656_10019609	All Organisms → cellular organisms → Bacteria → Acidobacteria	2677	Open in IMG/M
3300025898\|Ga0207692_10492980	Not Available	776	Open in IMG/M
3300025912\|Ga0207707_10206167	All Organisms → cellular organisms → Bacteria	1713	Open in IMG/M
3300025913\|Ga0207695_10325502	Not Available	1426	Open in IMG/M
3300025913\|Ga0207695_10520998	Not Available	1071	Open in IMG/M
3300025913\|Ga0207695_10744158	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300025914\|Ga0207671_10979355	Not Available	667	Open in IMG/M
3300025916\|Ga0207663_10746036	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	777	Open in IMG/M
3300025916\|Ga0207663_11563853	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300025924\|Ga0207694_11563584	Not Available	556	Open in IMG/M
3300025927\|Ga0207687_10010479	All Organisms → cellular organisms → Bacteria	6054	Open in IMG/M
3300025928\|Ga0207700_10908229	Not Available	788	Open in IMG/M
3300025928\|Ga0207700_11260752	Not Available	659	Open in IMG/M
3300025928\|Ga0207700_11896517	Not Available	522	Open in IMG/M
3300026319\|Ga0209647_1005501	All Organisms → cellular organisms → Bacteria	9250	Open in IMG/M
3300026322\|Ga0209687_1238081	Not Available	563	Open in IMG/M
3300026551\|Ga0209648_10202060	All Organisms → cellular organisms → Bacteria	1516	Open in IMG/M
3300026557\|Ga0179587_10661150	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300027616\|Ga0209106_1010762	Not Available	1922	Open in IMG/M
3300027775\|Ga0209177_10244731	Not Available	659	Open in IMG/M
3300027826\|Ga0209060_10011045	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5319	Open in IMG/M
3300027857\|Ga0209166_10432148	Not Available	681	Open in IMG/M
3300027903\|Ga0209488_10127892	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1914	Open in IMG/M
3300027903\|Ga0209488_10348358	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300031057\|Ga0170834_105466967	Not Available	520	Open in IMG/M
3300031057\|Ga0170834_107705721	Not Available	558	Open in IMG/M
3300031231\|Ga0170824_105583784	Not Available	609	Open in IMG/M
3300031474\|Ga0170818_112857160	Not Available	584	Open in IMG/M
3300031820\|Ga0307473_11363205	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300031890\|Ga0306925_10855651	Not Available	939	Open in IMG/M
3300031938\|Ga0308175_100021797	All Organisms → cellular organisms → Bacteria → Acidobacteria	5130	Open in IMG/M
3300031962\|Ga0307479_10323691	Not Available	1524	Open in IMG/M
3300032180\|Ga0307471_102605844	Not Available	641	Open in IMG/M
3300033412\|Ga0310810_10836006	Not Available	823	Open in IMG/M
3300033486\|Ga0316624_10303939	Not Available	1294	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.93%
Host-Associated	Host-Associated	16.07%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.04%
Plants	Host-Associated → Plants	15.18%
Aquatic	Environmental → Aquatic	0.89%
Human	Host-Associated → Human	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.04%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.61%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.57%
Freshwater	Environmental → Aquatic → Freshwater	0.89%
Digestive System	Host-Associated → Human → Digestive System	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.25%
Loam	Environmental → Terrestrial → Soil → Loam	25.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.71%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.57%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.79%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.89%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	23.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.71%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.04%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.57%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.89%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.89%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.89%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.89%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.89%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	16.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	7.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.25%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.36%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.36%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.36%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	5.36%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.46%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.57%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.68%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.79%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.89%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.89%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004799	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005650	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_055 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1203820911	3300002568	Soil	MKKLLTIAFTLMLGASLSFAQAAGGSTDKPAGDKTTTKSGKKTAHHKGGKKSKKNSGGTTTPPPK*
JGI25614J43888_100260102	3300002906	Grasslands Soil	MKKLLTIAFALLLGATLSVAQAGGGTTDKGAGDKASTSTTDTKGGKKAHHHKGGKKGKKGSGGTTTPAPK*
JGI25616J43925_100075223	3300002917	Grasslands Soil	MKKLLTILFTLMVGASLSFAQAGGGSTGKPTDTTKSDTGKKGKKHHKGGKKGKKGSGGTTTPPPK*
Ga0062595_1000347281	3300004479	Soil	MKKLLTIAFALVVGSALSFAQAAGGATTTTDKPATGKKATTSASKTGKKAHKGGKKGKKSSGATTTPAPK*
Ga0062595_1001127062	3300004479	Soil	MKKLLTIAFTLLLGGTLSFAQAGGGSTDKPAGDKTTTTKSGKKTAHHKGGKKSKKNSGGTTTPPPK*
Ga0062595_1014850461	3300004479	Soil	MKKLLTIAFALMIGASLSFAQTGGAGQTGTTTTDSGSTKGGKKKSGKKGGTKKSKKNSGGTTTPPPK*
Ga0058863_119494643	3300004799	Host-Associated	MKKLLTIAFTLLLGATLSFAQATGGSTDKGTADKGTTAPAKTKSGKKTHAHKGGKKAKKAGTTTPPPK*
Ga0066676_102188903	3300005186	Soil	MKKLLTIAFTLLLGATLSFAQATGGSTDKPAEGGKTTTKSGKKTTHHKGGKKSKKNSGGTTTTPPPK*
Ga0070683_1002361633	3300005329	Corn Rhizosphere	MKKLLTIAFTLLLGATLSFAQATGGSTDKGTADKGTTAPAKTKSGKKTHAHKGGKKSKKADTTTPPPK*
Ga0070683_1020694591	3300005329	Corn Rhizosphere	MKKLLTIAFTLLLGASLSFAQAGGGSTDKPAEGGKKTTSTKSGKKAHKGGKKSKKNSGGTTTPPPK*
Ga0070680_1000773841	3300005336	Corn Rhizosphere	LLGATLSFAQATGGSTDKGTADKGTTAPAKTKSGKKTHAHKGGKKSKKADTTTPPPK*
Ga0070661_1011413971	3300005344	Corn Rhizosphere	MKKLLTIAFTLMLGASLSFAQAAGGSTDKPAGDKTTTKSGKKSTAHHKGGKKSKKNSGGTTTPPPK*
Ga0070709_103221802	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKKLLTIAFTLLLGASLSFAQAGGGSTDKPAGDKTATTKSGKKTTHHKGGKKSKKNSGGTTTPPPK*
Ga0070709_103265672	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKKLLTIAFTLLLGASLSFAQAGGGSTDKGAGDKTPTTKSGKKTTHHKGGKKSKKNSGGTTTPPPK*
Ga0070709_103772331	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKKLLTIAFTLLLGASLSFAQATGGSTDKPAEGGKKTTSTKSGKKAHKGGKKSKKNSGGTTTPPPK*
Ga0070709_116571811	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKKLLTIAFTLLLGASLSFAQAGGGSTDKPAGDKTTTTKSGKKTTHHKGGKKSKKNSGGTTTP
Ga0070714_1012704882	3300005435	Agricultural Soil	MKKLLTIAFTLLLGASLSFAQAGGGSTDKPAGDKTTTTKSGKKTTHHKGGKKSKKNSGGTTTPPPK*
Ga0070713_1002235813	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKKLLTIAFTLLLGVSLSFAQATGGSTDKPAEGGKKTTSTKSGKKAHKGGKKSKKNSGGTTTPPPK*
Ga0070713_1007182251	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKKLLTIAFTLLLGATLSFAQATGGSTDKGAGDKTTTPPAKTKSTKKSTSHKGGKKSKKNTGDSTPPPK*
Ga0070710_105087023	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MKKLLTIAFTLLLGASLSFAQATGGSTDKGAGDKSTTPPAKTKSTKKSTSHKGGKK
Ga0070711_1005784821	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MKKLLTIAFAMLLGATISVAQAGGGSTGSTDKAGTKAPTSTTDTKAGKKGHHKGGKKSKKNSGGTTTPPPK*
Ga0070681_101304063	3300005458	Corn Rhizosphere	LGATLSFAQATGGSTDKGTADKGTTAPAKTKSGKKTHAHKGGKKAKKAGTTTPPPK*
Ga0070699_1003582521	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MKKLLTIAFTLLLGACLSFAQATGGSTDKPAEGGKKTTSTKSGKKGHKGGKKSKKNS
Ga0070699_1007530011	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MKKLLTIAFTLLLGASLSFAQATGGSADKGAGDKSTTPPAKTTSSKKSHSHKGGK
Ga0070734_100173714	3300005533	Surface Soil	MKKLLTIAFTLLLGASLSFAQAGGGSTDKGAGDKTTTPPAKTKSTKKSTGHKGGKKSKKNTGDSTPPPK*
Ga0070684_1000218364	3300005535	Corn Rhizosphere	MKKLLTIAFTLMLGASLSFAQAAGGSTDKPAGDKTTTKSGKKSTAHHKGGKKSKKNSGGNTTPPPK*
Ga0070730_101375743	3300005537	Surface Soil	MKKLLTIAFTLLLGATLSFAQATGGSTDKPAEGGKKTTTKSGKKAHKGGKKSKKNSGGTTTPPPK*
Ga0068853_1000496504	3300005539	Corn Rhizosphere	MKKLLTIAFTLLLGASLSFAQAAAGASTDKPTGNKTTTKSGKKTAHHKGGKKSKKNSGSTTTPPPK*
Ga0070732_101208252	3300005542	Surface Soil	MKKLLTIAFTLLLGATLSFAQATGGSTDKPAEGGKKTTTKSGKKGHKGGKKSKKNSGGTTTPPPK*
Ga0066702_100546933	3300005575	Soil	MKKLLTIAFALLLGVTLSVAQAGGGSTDKGAGDKASTKSGKKTHHHKGGKKGKKSSGGTTTPPPK*
Ga0068856_1012550963	3300005614	Corn Rhizosphere	MKKLLTIAFTLLLGATLSFAQATGGSTDKPAEGGKTTTTKSGKKSTHHKGGKKSKKNSGGTTTTPPPK*
Ga0075038_100173811	3300005650	Permafrost Soil	MKKLLTIVFAMLLGATLSVAQATGGSTDKTAPSGKTTTSASKTKAKTKAKTKSHAKKGGK
Ga0070715_105901612	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MKKLLTIAFTLLLGATLSFAQATGGSTDKPAEGGKKTTSTKSGKKGHKGGKKSKKSSGSTTTPAPK*
Ga0070715_106127091	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MKKLLTIAFTLLLGATLSFAQATGGSTDKPAEGGKKTTSTKSGKKAHKGGKKSKKNSGGTTTPPPK*
Ga0070712_1006030821	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKKLLTIAFTLLLGASLSFAQATGGSTDKPAEGGKKTTSTKSGKKAHKGGKKSKK
Ga0079222_125568242	3300006755	Agricultural Soil	MKKLLTIAFTLLLGASLSFAQAGGGSTDKPAGDKTTTTKSGEKTTHHKGGKKSKKNSGGTTTPPPK*
Ga0066659_115717411	3300006797	Soil	MNKLLTIAFTLLLGATLSFAQATGGSTDKPAEGGKKTTSTKSAKKAHKGGKKGKKSSGGTTTPAPK*
Ga0066660_101682903	3300006800	Soil	MKKLLTIAFALLLGATLSVAQAGGGSTDKGAGDKASTKSGKKTHHHKGGKKGKKSSGGTTTPPPK*
Ga0079220_111120562	3300006806	Agricultural Soil	MKKLLTIAFTLLLGATLSFAQATGGSTDKPAEGGKKTTSTKSGKKAHKGGKKSKKNSGGTTTPAPK*
Ga0075426_115532272	3300006903	Populus Rhizosphere	MKKLLTIAFTLLLGASLSFAQATGGSADKGAGDKSTTPPAKTTSSKKSHSHKGGKKAKKKAPA
Ga0099795_104343101	3300007788	Vadose Zone Soil	MKKLLTIAFTLLLGATLSFAQATGGSTDKPAGDKTTTKPAKKTAHNRGGKKRKKNPGGTTTPPRNKHPAASEYQSGPSPAAFF
Ga0105245_100012777	3300009098	Miscanthus Rhizosphere	MKKLLTIAFTLLLGASLSFAQATGGSTDKAAGDKTPTTKSGKKTTHHKGGKKSKKNSGGTTTPPPK*
Ga0099792_102155252	3300009143	Vadose Zone Soil	MKKLLTLLCTLVLGVTLSFAQAGGGSTGKPADTTKTDTGKKGKKHHKGGKKSKKNSGGTTTPAPK*
Ga0105241_106839881	3300009174	Corn Rhizosphere	LMLGASLSFAQAAGGSTDKPAGDKTTTKSGKKSTAHHKGGKKSKKNSGGNTTPPPK*
Ga0105238_100450863	3300009551	Corn Rhizosphere	MKKLLTIAFTLLLGATLSFAQATGGSTDKGTADKGTTAPAKTKSGEKTHAHKGGKKAKKAGTTTPPPK*
Ga0126373_118042732	3300010048	Tropical Forest Soil	MKKLTTIAFALLLGATLSRAQATGGSTDNSSTTKTSKTTDHKGGKKGHKGGKKGKKSSGGTTTPPPK*
Ga0099796_103101502	3300010159	Vadose Zone Soil	MKKLLTIAFTLLLGATLSFAQATGGSTDKPAGDKTTTKSSKKTAHHKGGKKSKKNSGGTTTPPPK*
Ga0126370_103042583	3300010358	Tropical Forest Soil	MKKLLTIAFALMLGSTLSFAQATGGTTSTDKPAATGKKGTTAAKSGKKGHKGGKKGKKSSGSTTTPPPK*
Ga0126376_116637672	3300010359	Tropical Forest Soil	MKKLLTIAFTLLLGATLSFAQAGGGSTDKPAEGGKKTTDTKSGKKGHKGGKKGKKGSSSTTTPPPK*
Ga0134125_102848423	3300010371	Terrestrial Soil	MKKLLTIAFTLLLGACLSFAQATGGSTDKPAEGGKKTTSTKSGKKGHKGGKKSKKNSGGTTTPPPK*
Ga0134128_102259613	3300010373	Terrestrial Soil	TLLLGATLSFAQATGGSTDKGTADKGTTAPAKTKSGKKTHAHKGGKKSKKADTTTPPPK*
Ga0134128_103685032	3300010373	Terrestrial Soil	MKKLLTIAFTLLLGACLSFAQATSGSTDKPAEGGKTTTTKSGKKSTHHKGGKKSKKNSGGTTTTPPPK*
Ga0134128_112561323	3300010373	Terrestrial Soil	MKKLLTIAFTLLLGGTLSFAQAGGGSTDKPAGDKTTTTKSGKKTAHHKGGKKSKKNSGGT
Ga0105239_122887112	3300010375	Corn Rhizosphere	MKKLLTIAFTLLLGASLSFAQAGGGSTDKPAEGGKKTTSTKSGKKAHKGGKKSKKNSGGTTTPPP
Ga0126381_1000729294	3300010376	Tropical Forest Soil	MKKLLTIAFTLLIGATLSFAQAGGGSTDKPAEGGKKTTTTKSGKKGHKGGKKSKKNSGGTTTPPPK*
Ga0134124_111410411	3300010397	Terrestrial Soil	MKKLLTIAFTLLLGATLSFAQATGGSTDKPAEGGKKTTSTKSGKKVHKGGKKSKKNSGGTTTPAPK*
Ga0126383_100722723	3300010398	Tropical Forest Soil	MKKLLTIAFTLLLAGTLSFAQAGGGSTDKPAEGGKKTTDTKSGKKGHKGGKKSKKGSSTTTPPPK*
Ga0134127_118683971	3300010399	Terrestrial Soil	MKKLLTIAFTLMLGASLSFAQAAGGSTDKPAGDKTTTKSGKKSTAHHKGGKKSKKNSGGSTTPPPK*
Ga0137392_107550001	3300011269	Vadose Zone Soil	MKKLLTLVFTLMLAATLSFAQATGGSTDKSGKTADTGKTTETGKKGKTKSNGKKGGKKGEKSSGGTTTPAPK*
Ga0137383_103423613	3300012199	Vadose Zone Soil	MKKLLTIAFTLLRGATLSFAQATDASTDKPAEGGKKTTTTKSAKKGHKGGKKGKKSSGGTTTPAPK
Ga0137380_101390792	3300012206	Vadose Zone Soil	MKKLLTIAFTLLLGATLSFAQATGGSTDKPAEGGKKTTSTKSAKKAHKGGKKGKKSSGGTTTPAPK*
Ga0137395_103358343	3300012917	Vadose Zone Soil	MKKLLMIAFTLLLGASLSFAQATGGSTDKGAGDKGATTKTGKKSHTKKGGKKSKKSSGGTTTPAPK*
Ga0137359_111423561	3300012923	Vadose Zone Soil	MKKLLTIAFTLLLGATLSFAQATGGSTDKPAEGGKKTTSTKSAKKGHKGGKKGKKSSGGTTTPAPK*
Ga0137419_107925032	3300012925	Vadose Zone Soil	MKKLLTIAFTLLLGASLSFAQATGGSTDKGAGDPRPTTKTSKKSHTKKGGKKSKKSSGGTTTPAPK*
Ga0164298_100544603	3300012955	Soil	MKKLLTIAFTLLLGASLSFAQATGGSTDKAAGDKTTTTKSGKKTTHHKGGKKSKKNSGGTTTPPPK*
Ga0164303_109520951	3300012957	Soil	MKKLLTIAFTLLLGASLSFAQATGGSTDKPAEGGKKTTSTKSGKKAHKGGKKSKKNSGGTTTPAPK*
Ga0164301_116570521	3300012960	Soil	MKKLLTIAFTLMLGATLSFAQATGGSTDKPAEGGKNTASTKSGKKAHKGGKKSKKNSGGTTTPAPK*
Ga0164302_118495001	3300012961	Soil	MKKLLTIAFTLLLGVSLSFAQAGGGSTDKPAEGGKKTSTTKSGKKGHKGGKKSKKNSGGTTTPPPK*
Ga0164309_115861292	3300012984	Soil	LLGGALSFAQTGGSTGGSTTGGDKTTKSGKKTTHHKGGKKSKKNSGGTTTPPPK*
Ga0164305_111980452	3300012989	Soil	MKKLLTIAFTLLLGGALSFAQTGGSTGGSTTGGDKTTKSGKKTTHHKGGKKSKKNSGGTTTPPPK*
Ga0157372_123347021	3300013307	Corn Rhizosphere	MKKLLTIAFTLLLGASLSFAQAAAGASTDKPTGNKTTTKSGKKTAHHKGGKKSKKNSGSTTT
Ga0187824_102690111	3300017927	Freshwater Sediment	MKKLLTIAFTLLLGATLSVAQTGGSTGGSTTGGDKTASGDKTTKSGKKTTHHKGGKKSKKKGAESTPPPK
Ga0066662_100223633	3300018468	Grasslands Soil	MKKLLTIAFALLLGVTLSVAQAGGGSTDKGAGDKASTKSGKKTHHHKGGKKGKKSSGGTTTPPPK
Ga0066662_105391562	3300018468	Grasslands Soil	MKKLLTIAFTLLLGATLSFAQAAGGSTDKGAGDKGTTAPAPAKTKSGKKSHSHKGGKKSKKSADTTTAAPK
Ga0210407_106714532	3300020579	Soil	MKKLLTIAFTLLLGASLSFAQAGGGSTDKPAGDKTATTKAGKKSHTHKGGKKSKKSSGGTTTPAPK
Ga0126371_130539332	3300021560	Tropical Forest Soil	MKKLLTIAFTLLLGATLSFAQAGGGSTDKPADKTTESGKKGGKKGHKGGKKSKKGSSGTTTPPPK
Ga0207656_100196094	3300025321	Corn Rhizosphere	MKKLLTIAFTLMLGASLSFAQAAGGSTDKPAGDKTTTKSGKKSTAHHKGGKKSKKNSGGNTTPPPK
Ga0207692_104929801	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	LLLGASLSFAQAGGGSTDKPAGDKTATTKSGKKTTHHKGGKKSKKNSGGTTTPPPK
Ga0207707_102061672	3300025912	Corn Rhizosphere	MKKLLTIAFTLLLGATLSFAQATGGSTDKGTADKGTTAPAKTKSGKKTHAHKGGKKSKKADTTTPPPK
Ga0207695_103255022	3300025913	Corn Rhizosphere	MKKLLTIAFTLLLGASLSFAQAAAGASTDKPTGNKTTTKSGKKTAHHKGGKKSKKNSGSTTTPPPK
Ga0207695_105209982	3300025913	Corn Rhizosphere	ATLSFAQATGGSTDKGTADKGTTAPAKTKSGKKTHAHKGGKKAKKAGTTTPPPK
Ga0207695_107441581	3300025913	Corn Rhizosphere	MKKLLTIAFTLLLGATLSFAQATGGSTDKGTADKGTTAPAKTKSGKKTHAHKGGKKSKKADTTTPPP
Ga0207671_109793552	3300025914	Corn Rhizosphere	MKKLLTIAFTLLLGASLSFAQAGGGSTDKPAEGGKKTTSTKSGKKAHKGGKKSKKNSGGTTTPPPK
Ga0207663_107460362	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MKKLLTIAFAMLLGATISVAQAGGGSTGSTDKAGTKAPTSTTDTKAGKKGHHKGGKKSKKNSGGTTTPPPK
Ga0207663_115638531	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	LLGATLSFAQATGGSTDKPAEGGKKTTSTKSGKKAHKGGKKSKKNSGSTTTPPPK
Ga0207694_115635842	3300025924	Corn Rhizosphere	MKKLLTIAFTLLLGATLSFAQATGGSTDKGTADKGTTAPAKTKSGKKTHAHKGGKKAKKAGTTTPPPK
Ga0207687_100104797	3300025927	Miscanthus Rhizosphere	MKKLLTIAFTLLLGASLSFAQATGGSTDKAAGDKTPTTKSGKKTTHHKGGKKSKKNSGGTTTPPPK
Ga0207700_109082291	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MKKLLTIAFTLLLGVSLSFAQATGGSTDKPAEGGKKTTSTKSGKKAHKGGKKSKKNSGGTTTPPPK
Ga0207700_112607522	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MKKLLTIAFTLLLGATLSFAQATGGSTDKGAGDKTTTPPAKTKSTKKSTSHKGGKKSKKNTGDSTPPPK
Ga0207700_118965172	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	EEATYDCVTLLLGASLSFAQATGGSTDKPAEGGKKTTSTKSGKKAHKGGKKSKKNSGGTTTPPPK
Ga0207698_111882861	3300026142	Corn Rhizosphere	MKKLLTIAFTLLLGATLSFAQATGGSTDKGTADKGTTAPAKTKSGKKTHAHKGG
Ga0209647_10055015	3300026319	Grasslands Soil	MKKLLTIAFALLLGATLSVAQAGGGTTDKGAGDKASTSTTDTKGGKKAHHHKGGKKGKKGSGGTTTPAPK
Ga0209687_12380811	3300026322	Soil	MKKLLTIAFTLLLGATLSFAQATGGSTDKPAEGGKKTTSTKSAKKAHKGGKKGKKSSGGTTTPAPK
Ga0209648_102020602	3300026551	Grasslands Soil	MKKLLTILFTLMVGASLSFAQAGGGSTGKPTDTTKSDTGKKGKKHHKGGKKGKKGSGGTTTPPPK
Ga0179587_106611502	3300026557	Vadose Zone Soil	MKKLLTLLCTLVLGVTLSFAQAGGGSTGKPADTTKTDTGKKGKKHHNGGKKSKKNSGGTTTPAPK
Ga0209106_10107622	3300027616	Forest Soil	MKKILTVVFTMLLGATLSMAQATAGSTDTKKPATTKSGKKATAHKGGKKGKKSSGGTTTPAPK
Ga0209177_102447312	3300027775	Agricultural Soil	MKKLLTIAFTLLLGATLSFAQATGGSTDKPAEGGKKTTTKSGKKAHKGGKKSKKNSGGTTTPPPK
Ga0209060_100110455	3300027826	Surface Soil	MKKLLTIAFTLLLGASLSFAQAGGGSTDKGAGDKTTTPPAKTKSTKKSTGHKGGKKSKKNTGDSTPPPK
Ga0209166_104321481	3300027857	Surface Soil	MKKLLTIAFTLLLGATLSFAQATGGSTDKGAGDKGATTTTPKTKSGKKTHSHKGGKKTTKKGAESSTTPPPK
Ga0209488_101278923	3300027903	Vadose Zone Soil	MKKLLTIAFTLLLGATLSFAQATGGSTDKPAGDKTTTKSSKKTAHHKGGKKSKKNSGGTTTPPPK
Ga0209488_103483582	3300027903	Vadose Zone Soil	MKKLLTLLCTLVLGVTLSFAQAGGGSTGKPADTTKTDTGKKGKKHHKGGKKSKKNSGGTTTPAPK
Ga0170834_1054669672	3300031057	Forest Soil	MKKLLTIAFTLLLGATLSFAQATGGSSDKGTGDKSTTPPAKTKSAKKAHKGGKKKK
Ga0170834_1077057212	3300031057	Forest Soil	MKKLLTIAFTLLLGASLSFAQATGGSTDKGTGNKSTTPPAKTKSATKAHKGGKKGKKSSGGTTT
Ga0170824_1055837843	3300031231	Forest Soil	MKKLLTIAFTLLLGATLSFAQATGGSTDKGTGDKSTTPPAKTKSAKKAHKGGKKKK
Ga0170818_1128571602	3300031474	Forest Soil	MKKLLTIAFTLLLGATLSFAQATGGSTDKGTGDKSTTPPAKTKSTKKAHKGGKKGKKS
Ga0307473_113632051	3300031820	Hardwood Forest Soil	TIAFAMLLGATLSVAQAGGGSTDKGAGDKASTSTTDTKSGKKTHHHKGGKKGKKGSGGTTTPPPK
Ga0306925_108556513	3300031890	Soil	MKKLLTLAFAMLLGATLSFAQATGGSTDKPAGKTATKTADTKTETKSGKKGHKGGKKSKKGSSTTTPPPK
Ga0308175_1000217974	3300031938	Soil	MKKLLTIVFTLLLGATLSFAQASGGSTDKGTADKGTTAPAKTKSGKKTHAHKGGKKAKKAGTTTPPPK
Ga0307479_103236912	3300031962	Hardwood Forest Soil	MKKLLTIAFTLLLGATLSFAQATGGSTDKPAEGGKKTTTKSGKKAHKGGKKSKKSSGSTTTPAPK
Ga0307471_1026058442	3300032180	Hardwood Forest Soil	MKKLLTIAFAMLLGATLSVAQATGGTTGTTDKPADKTTTKAGKKSHHHKGGKKGKKNSGGTTTPAPK
Ga0310810_108360061	3300033412	Soil	MKKLLTIAFTLLLGATLSFAQATGGSTDKPAEGGKKTTSTKSGKKAHKGGKKSKKNSGGTTTPAPK
Ga0316624_103039392	3300033486	Soil	MKKLLTIAFTLLLGATLSFAQAGGGSTDKGAGDKGTTTTKKGAKKGHKGGKKSKKSSGGTTTPAPK

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.24
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.24
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084769

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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