Metagenome / Metatranscriptome Family F084775

Basic Information
Family ID	F084775
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	42 residues
Representative Sequence	PAAHKLLPPTLDWDVAPHVTANVRDKTVDVDLIYSVKAPK
Number of Associated Samples	105
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.89 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	89.29 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Most Common Taxonomy
Group	Unclassified (60.714 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (8.036 % of family members)
Environment Ontology (ENVO)	Unclassified (25.893 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.893 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 5.88% β-sheet: 29.41% Coil/Unstructured: 64.71%
Feature Viewer

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Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF01862	PvlArgDC	23.21
PF00106	adh_short	1.79
PF01916	DS	1.79
PF04365	BrnT_toxin	0.89
PF04371	PAD_porph	0.89
PF10282	Lactonase	0.89
PF07519	Tannase	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG1945	Pyruvoyl-dependent arginine decarboxylase	Amino acid transport and metabolism [E]	23.21
COG1899	Deoxyhypusine synthase	Translation, ribosomal structure and biogenesis [J]	1.79
COG2929	Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin system	Defense mechanisms [V]	0.89
COG2957	Agmatine/peptidylarginine deiminase	Amino acid transport and metabolism [E]	0.89

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
All Organisms	root	All Organisms	39.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
cellular organisms	root	All Organisms → cellular organisms	39.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	39.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	31.25 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	16.96 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	14.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.96 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	14.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.96 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	14.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.96 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.96 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573000\|GPBTN7E02JKYD7	Not Available	502	Open in IMG/M
3300001166\|JGI12694J13545_1016335	Not Available	726	Open in IMG/M
3300001471\|JGI12712J15308_10125908	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300002245\|JGIcombinedJ26739_101192946	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300004635\|Ga0062388_100383744	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1213	Open in IMG/M
3300005526\|Ga0073909_10111409	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300005538\|Ga0070731_10188315	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1370	Open in IMG/M
3300005541\|Ga0070733_10990908	Not Available	564	Open in IMG/M
3300005542\|Ga0070732_10939130	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300005555\|Ga0066692_10647528	Not Available	659	Open in IMG/M
3300005764\|Ga0066903_105539345	Not Available	665	Open in IMG/M
3300006028\|Ga0070717_10505828	Not Available	1092	Open in IMG/M
3300006052\|Ga0075029_100840758	Not Available	627	Open in IMG/M
3300006163\|Ga0070715_10516323	Not Available	687	Open in IMG/M
3300006172\|Ga0075018_10274241	Not Available	824	Open in IMG/M
3300006175\|Ga0070712_101237986	Not Available	650	Open in IMG/M
3300006176\|Ga0070765_100197017	Not Available	1826	Open in IMG/M
3300009521\|Ga0116222_1297179	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300009545\|Ga0105237_11917997	Not Available	600	Open in IMG/M
3300010159\|Ga0099796_10287635	Not Available	693	Open in IMG/M
3300010359\|Ga0126376_10766269	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	938	Open in IMG/M
3300010361\|Ga0126378_10163703	Not Available	2277	Open in IMG/M
3300010366\|Ga0126379_10618468	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1170	Open in IMG/M
3300010376\|Ga0126381_100609455	Not Available	1554	Open in IMG/M
3300010379\|Ga0136449_100488862	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2142	Open in IMG/M
3300012096\|Ga0137389_10609794	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	938	Open in IMG/M
3300012189\|Ga0137388_11592676	Not Available	589	Open in IMG/M
3300012683\|Ga0137398_10997942	Not Available	580	Open in IMG/M
3300012685\|Ga0137397_10906655	Not Available	653	Open in IMG/M
3300012929\|Ga0137404_11318791	Not Available	665	Open in IMG/M
3300012944\|Ga0137410_11153071	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300012948\|Ga0126375_11228438	Not Available	625	Open in IMG/M
3300012984\|Ga0164309_10801463	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	758	Open in IMG/M
3300012986\|Ga0164304_11638647	Not Available	537	Open in IMG/M
3300013100\|Ga0157373_11092990	Not Available	598	Open in IMG/M
3300014165\|Ga0181523_10581168	Not Available	616	Open in IMG/M
3300014489\|Ga0182018_10082723	Not Available	1903	Open in IMG/M
3300014501\|Ga0182024_12592475	Not Available	544	Open in IMG/M
3300014654\|Ga0181525_10013936	All Organisms → cellular organisms → Bacteria	5213	Open in IMG/M
3300014655\|Ga0181516_10615405	Not Available	561	Open in IMG/M
3300014657\|Ga0181522_10103224	Not Available	1648	Open in IMG/M
3300015262\|Ga0182007_10179427	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M
3300015265\|Ga0182005_1286155	Not Available	518	Open in IMG/M
3300015357\|Ga0134072_10473335	Not Available	510	Open in IMG/M
3300015373\|Ga0132257_102761891	Not Available	640	Open in IMG/M
3300017822\|Ga0187802_10073049	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1273	Open in IMG/M
3300017930\|Ga0187825_10225494	Not Available	681	Open in IMG/M
3300017933\|Ga0187801_10416615	Not Available	560	Open in IMG/M
3300017934\|Ga0187803_10358089	Not Available	587	Open in IMG/M
3300017936\|Ga0187821_10079305	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1195	Open in IMG/M
3300017946\|Ga0187879_10328109	Not Available	849	Open in IMG/M
3300017955\|Ga0187817_10217183	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1219	Open in IMG/M
3300017970\|Ga0187783_10509402	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	872	Open in IMG/M
3300017975\|Ga0187782_11595700	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300017988\|Ga0181520_10533543	Not Available	825	Open in IMG/M
3300018019\|Ga0187874_10231943	Not Available	761	Open in IMG/M
3300018042\|Ga0187871_10316308	Not Available	863	Open in IMG/M
3300018062\|Ga0187784_10699442	All Organisms → cellular organisms → Bacteria → Proteobacteria	811	Open in IMG/M
3300018062\|Ga0187784_11042181	Not Available	650	Open in IMG/M
3300018085\|Ga0187772_10793080	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	684	Open in IMG/M
3300018086\|Ga0187769_10238976	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1350	Open in IMG/M
3300018086\|Ga0187769_10436419	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	986	Open in IMG/M
3300018088\|Ga0187771_10566861	Not Available	962	Open in IMG/M
3300019888\|Ga0193751_1040539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2085	Open in IMG/M
3300020579\|Ga0210407_10032981	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3853	Open in IMG/M
3300020579\|Ga0210407_11266770	Not Available	552	Open in IMG/M
3300020580\|Ga0210403_10399423	Not Available	1122	Open in IMG/M
3300021401\|Ga0210393_10926019	Not Available	707	Open in IMG/M
3300021401\|Ga0210393_11217898	Not Available	606	Open in IMG/M
3300021405\|Ga0210387_11770057	Not Available	521	Open in IMG/M
3300021407\|Ga0210383_10139940	All Organisms → cellular organisms → Bacteria	2054	Open in IMG/M
3300021477\|Ga0210398_11602164	Not Available	505	Open in IMG/M
3300021560\|Ga0126371_11277395	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	868	Open in IMG/M
3300022722\|Ga0242657_1064236	Not Available	836	Open in IMG/M
3300024225\|Ga0224572_1043540	Not Available	843	Open in IMG/M
3300025404\|Ga0208936_1000272	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7369	Open in IMG/M
3300025898\|Ga0207692_10807794	Not Available	613	Open in IMG/M
3300025915\|Ga0207693_10960419	Not Available	654	Open in IMG/M
3300025916\|Ga0207663_11216114	Not Available	607	Open in IMG/M
3300025920\|Ga0207649_10526275	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	902	Open in IMG/M
3300025939\|Ga0207665_11106898	Not Available	631	Open in IMG/M
3300026294\|Ga0209839_10010959	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3795	Open in IMG/M
3300027266\|Ga0209215_1020272	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	857	Open in IMG/M
3300027842\|Ga0209580_10280514	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	829	Open in IMG/M
3300027874\|Ga0209465_10003115	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7199	Open in IMG/M
3300027889\|Ga0209380_10498084	Not Available	711	Open in IMG/M
3300027895\|Ga0209624_10697849	Not Available	670	Open in IMG/M
3300027911\|Ga0209698_10218170	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1536	Open in IMG/M
3300027986\|Ga0209168_10117276	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1365	Open in IMG/M
3300028017\|Ga0265356_1042478	Not Available	501	Open in IMG/M
3300028788\|Ga0302189_10331909	Not Available	607	Open in IMG/M
3300028806\|Ga0302221_10143137	Not Available	1053	Open in IMG/M
3300028906\|Ga0308309_10132962	All Organisms → cellular organisms → Bacteria	1978	Open in IMG/M
3300029882\|Ga0311368_10211374	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1529	Open in IMG/M
3300029951\|Ga0311371_10273963	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2409	Open in IMG/M
3300029992\|Ga0302276_10307803	Not Available	683	Open in IMG/M
3300030813\|Ga0265750_1013422	Not Available	975	Open in IMG/M
3300031231\|Ga0170824_116743497	Not Available	644	Open in IMG/M
3300031231\|Ga0170824_117157743	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1004	Open in IMG/M
3300031446\|Ga0170820_17077275	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1000	Open in IMG/M
3300031708\|Ga0310686_106745000	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4327	Open in IMG/M
3300031718\|Ga0307474_10562405	Not Available	897	Open in IMG/M
3300031718\|Ga0307474_11189595	Not Available	603	Open in IMG/M
3300031753\|Ga0307477_10215003	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1335	Open in IMG/M
3300031823\|Ga0307478_11753154	Not Available	511	Open in IMG/M
3300031962\|Ga0307479_11938937	Not Available	539	Open in IMG/M
3300032076\|Ga0306924_11270970	Not Available	792	Open in IMG/M
3300032783\|Ga0335079_10212399	All Organisms → cellular organisms → Bacteria	2142	Open in IMG/M
3300032783\|Ga0335079_10711448	Not Available	1048	Open in IMG/M
3300032892\|Ga0335081_10637762	Not Available	1306	Open in IMG/M
3300032895\|Ga0335074_10652081	Not Available	1031	Open in IMG/M
3300033826\|Ga0334847_020118	Not Available	724	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.86%
Host-Associated	Host-Associated	7.14%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.89%
Aquatic	Environmental → Aquatic	16.96%
Plants	Host-Associated → Plants	7.14%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.54%
Freshwater	Environmental → Aquatic → Freshwater	14.29%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.25%
Peat	Environmental → Terrestrial → Peat	5.36%
Sediment	Environmental → Aquatic → Sediment	2.68%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.96%
Loam	Environmental → Terrestrial → Soil → Loam	15.18%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	14.29%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.39%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.68%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.11%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.07%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.93%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.25%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.36%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.68%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.68%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.04%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	7.14%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.25%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.25%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.36%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.36%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.36%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	4.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.46%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.46%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.57%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.68%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.68%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.68%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.79%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.79%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.89%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.89%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.89%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.89%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.89%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573000	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis 0-21cm (T0 for microcosms)	Environmental	Open in IMG/M
3300001166	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015265	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG	Host-Associated	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300025404	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300027266	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028017	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4	Host-Associated	Open in IMG/M
3300028788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029992	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_3	Environmental	Open in IMG/M
3300030813	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300033826	Peat soil microbial communities from Stordalen Mire, Sweden - 714 E2 1-5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
N55_01478610	2189573000	Grass Soil	YDSTYLSEYLPAAQKLLPPALDWEVVPHVTANVRDKSVDVDLIYSVKAPK
JGI12694J13545_10163351	3300001166	Forest Soil	AALKLLPPTLDWDVASHVTANGRDKTVDIDLIYTVKAPK*
JGI12712J15308_101259081	3300001471	Forest Soil	NRLLPASLDWEVVPHVTPNIRDKTVDVDLQYSVKAPKQ*
JGIcombinedJ26739_1011929461	3300002245	Forest Soil	RLLPASLDWEVVPHVTPNIRDKTVDVDLQYSVKAPKQ*
Ga0062388_1003837443	3300004635	Bog Forest Soil	LPEAHKLLAANLDWEVTPHVTANIREKSVDVDLIYSVKAPK*
Ga0073909_101114093	3300005526	Surface Soil	EAQKLLPPSLDWEVASHVTANVRDKSVDVDLIYSVKAPK*
Ga0070731_101883153	3300005538	Surface Soil	KLLPANLDWDVASHVTANVKDKSVDVDLIYSAKAPK*
Ga0070733_109909083	3300005541	Surface Soil	AQKLLPPSLDWEVASHVTANIRDKSVDVDIIYTAKAPK*
Ga0070732_109391301	3300005542	Surface Soil	AAQKLLPPAFDWEVSSHVTANERDKTVDVDLIYSVKAAK*
Ga0066692_106475282	3300005555	Soil	YLTAAQKLLPPSLDWEVASHVTANVRDKTVDVDLIYSVKAPK*
Ga0066903_1055393451	3300005764	Tropical Forest Soil	LSDYLPQAQKLLPSSLDWDVASHVTANVREKTVDVDIIYTVKAPK*
Ga0070717_105058281	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	KLLPSGLDWDVSPHVTANARDRTVDVDLIYSVKAPK*
Ga0075029_1008407581	3300006052	Watersheds	YLPAAHKLLPSGLDWDVSSHVTANVRDKTVDVDLIYSVKAPK*
Ga0070715_105163231	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	LPAAHKLLPSGLDWDVSPHVTANTRDKTVDVDLIYSVKAPK*
Ga0075018_102742412	3300006172	Watersheds	TYIDEYLPAAHKLLPANLDWDVTPHVTANVRDKTVDVDIIYSVKAPK*
Ga0070712_1012379862	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	NSTYLSEYLPAAERLLPPTLDWEVSPHVTPNVRDKTVDVDLIYTAKAPK*
Ga0070765_1001970174	3300006176	Soil	SEYLPAAHKLLPPTLDWDVAPHVTANVRDKTVDVDLIYSVKAPK*
Ga0116222_12971791	3300009521	Peatlands Soil	PAALDWEVSSHMTANIHDKTVDVDLIYTVKAPTEAR*
Ga0105237_119179971	3300009545	Corn Rhizosphere	LPPTLDWEVSPHVTPNVRDKTVDVDLIYTAKAPK*
Ga0099796_102876351	3300010159	Vadose Zone Soil	EYLPAAHKLLPANLDWDVAPHVTANVRDKTVDVDIIYSVKAPK*
Ga0126376_107662692	3300010359	Tropical Forest Soil	EFLPDARKLLPASLDWEVASHVTANVREKTVDVDLIYSAKAPR*
Ga0126378_101637031	3300010361	Tropical Forest Soil	SEYLPQARKLLPPTLDWDVSSHVTANVREKTVDIDLIYSVKAPK*
Ga0126379_106184681	3300010366	Tropical Forest Soil	LLPAALDWDVTPHVTANVRDKTVDVDLTYSAKAPR*
Ga0126381_1006094551	3300010376	Tropical Forest Soil	PTARKLLPPSLDWEVDPHVTANVGEKTVDVDLVYTVKAPK*
Ga0136449_1004888621	3300010379	Peatlands Soil	YLPEAQKLLPTRLDWEVSPHVTANVRDKTVDVDLIYSVRAPN*
Ga0137389_106097941	3300012096	Vadose Zone Soil	LKEYLPEANRLLPVNLDWGVTPHVTANVRDKTVDVDLQYTAKAPK*
Ga0137388_115926762	3300012189	Vadose Zone Soil	PQARKLLPANLDWEVSPHVTALSRDKTVDVDLQYTAKAPR*
Ga0137398_109979422	3300012683	Vadose Zone Soil	LPANLDWEVEPHVTAITRDKTVDVDLQYTAKATQ*
Ga0137397_109066551	3300012685	Vadose Zone Soil	LPAGFDWEVSTHATANVRDKTVDVDLIYSVKVPK*
Ga0137404_113187911	3300012929	Vadose Zone Soil	YIDEYLPAAQKLLPANLDWDVVSHVTANVHDKTVDVDIIYSVKAPK*
Ga0137410_111530711	3300012944	Vadose Zone Soil	STYLREYLAHANKLLPAALDWEVTPHVTANVRDKTVDVDLQYTARAPK*
Ga0126375_112284381	3300012948	Tropical Forest Soil	SEYLPAAHKLLPSGLDWDVTPHVTANVRDKTVDVDLIYAVKAPK*
Ga0164309_108014631	3300012984	Soil	QRLLPPTLDWEVSPHVTPNVRDKTVDVDLIYTAKAPK*
Ga0164304_116386471	3300012986	Soil	NSTYLSEYLPAARKALPANLDWDVASHVTANVKDKTVDIDLIYSAKAPK*
Ga0157373_110929901	3300013100	Corn Rhizosphere	TYLSEYLPAAQRLLPATLDWEVSPHVTPNVRDKTVDVDLIYTAKAPK*
Ga0181523_105811682	3300014165	Bog	FLPAARKLLPPTLDWDVSPHVTGNQRDKSVDVDLIYSVKAPK*
Ga0182018_100827233	3300014489	Palsa	PLARKLLPASLDWEVSTHVTALPSSKTVDVDLQYMAKAPQ*
Ga0182024_125924751	3300014501	Permafrost	ALKLLPPTLDWDVASHVTANGRDKTVDIDLIYTVKAPK*
Ga0181525_100139361	3300014654	Bog	EFLPQARKLLPPSLDWEVTPHVTALSRDKTVDVDLHYSAKAPQ*
Ga0181516_106154051	3300014655	Bog	SEYLPAAHKLLPPTLDWEVQPHVTANVRDKTVDVDLIYSVKAPK*
Ga0181522_101032244	3300014657	Bog	LPTTVDWDVTPHVTPMTADKTVDVDLQYTAKATR*
Ga0182007_101794271	3300015262	Rhizosphere	LPSAQKLLPPTLDWEVSPHVTANVGDKTVDVDLMYSAKAPK*
Ga0182005_12861551	3300015265	Rhizosphere	LLPPTLDWEVSPHVTANVKDKTVDVDLIYSAKAPK*
Ga0134072_104733352	3300015357	Grasslands Soil	YLPQAQKLLPPSLDWEVTPHVTANVKDKTVDVDLIYSAKAPK*
Ga0132257_1027618912	3300015373	Arabidopsis Rhizosphere	LSDYLPEARKLLPASLDWDVASHVTANVREKTVDVDLIYSAKAPR*
Ga0187802_100730493	3300017822	Freshwater Sediment	AQKLLPASLDWEVASHVTPNVRDKTVDVDLVYSVKAPK
Ga0187825_102254942	3300017930	Freshwater Sediment	YLPAAHKLLPSTLDWDVTPHVTANQRDKTVDVDLIYSVKAPK
Ga0187801_104166151	3300017933	Freshwater Sediment	LLPPSLDWEVASHVTPNVRDKTVDVDLVYSVKAPK
Ga0187803_103580891	3300017934	Freshwater Sediment	YLDAYLPEAHKLLPSRLDWEVEPHVTANVRDKTVDVDIVYSVRAPN
Ga0187821_100793051	3300017936	Freshwater Sediment	NTTYLDEYLPAAHKLLPAALDWDVDPHVTANQRDKTVDVDLIYSVKAPK
Ga0187879_103281092	3300017946	Peatland	QFLPLARKLLPPNLDWEVDPHVTAITRDKAVDVDLQYTAKATQ
Ga0187817_102171831	3300017955	Freshwater Sediment	SEYLPAAHKLLPPNLDWEVASHVTANVRDKSVDVDLIYSVKAPK
Ga0187783_105094021	3300017970	Tropical Peatland	VYDANYLAEYLPAAHKLLPASLDWEVDPHVTANIRDKTVDVDLIYSVKAPK
Ga0187782_115957001	3300017975	Tropical Peatland	AAHKLLPASLDWEVEPHVTANIRDKTVDVDLIYSVKAPK
Ga0181520_105335432	3300017988	Bog	LLPPTLDWEVASHVTANVRDKSVDVDLVYSVKAPK
Ga0187874_102319432	3300018019	Peatland	AAQKLLPPTLDWEVASHVTANVRDKSVDVDLVYSVKAPK
Ga0187871_103163081	3300018042	Peatland	RKLLPANMDWEVAPHVTAMARDKTVDVDLQYTAKAPQ
Ga0187784_106994421	3300018062	Tropical Peatland	YLPQAQKLLPANLDWEVADHVTANSHDKTVDVDLNYTAKAPR
Ga0187784_110421812	3300018062	Tropical Peatland	KLLPTTVDWDVSSHVTPIAVDKTVDVDLQYTAKALR
Ga0187772_107930801	3300018085	Tropical Peatland	LPAARKLLPANMDWDVASHVTAMAKDRTVDVDLQYTAKAPQ
Ga0187769_102389761	3300018086	Tropical Peatland	SYLSEARKLLPSRLDWEISPHATANVRDKTVDVDMIFSVKAPS
Ga0187769_104364192	3300018086	Tropical Peatland	ARKLLPSRLDWEISPHATANIRDKTVDVDMIFSVKAPS
Ga0187771_105668611	3300018088	Tropical Peatland	LTEAHKLLPSRLDWQVDPHVTANLRDKTVDVDIIYSVKAPN
Ga0193751_10405391	3300019888	Soil	PAANHLLPPALDWDVAPHVTANIRDKTVDVDLIYSVRAPK
Ga0210407_100329811	3300020579	Soil	FDSTYLSEYLPTAHKLLPSGLDWDVSPHVTANARDRTVDVDLIYSVKAPK
Ga0210407_112667702	3300020579	Soil	VFDSTYLSEYLPAAHKLLPSGLDWDVSPHVTANARDKTVDVDLIYSVKAPK
Ga0210403_103994233	3300020580	Soil	SEYLPAAQKLLPANFDWDVTHHETANFRDKSVDVDLIYSVKAPK
Ga0210393_109260191	3300021401	Soil	PKARKLLPANLDWEVAPHVTAMARDKTVDVDLQYTAKAPQ
Ga0210393_112178981	3300021401	Soil	LPAAQKLLPVNFDWDVASHVTSNLRDKSVDVDLIYTVKAPK
Ga0210387_117700572	3300021405	Soil	ARKLLPPAFDWDVDPHVTPIVRDKTVDVDLQYTVKATQ
Ga0210383_101399404	3300021407	Soil	KARQLLPANRDWEVAPHVTAMARDKTVDVDLQYTAKAPQ
Ga0210398_116021641	3300021477	Soil	LPAAQKLLPANFDWDVASHVTANIRDKSVDVDLIYSVKVPK
Ga0126371_112773952	3300021560	Tropical Forest Soil	LPTARKLLPPSLDWEVDPHVTANVGEKTVDVDLVYTVKAPK
Ga0242657_10642361	3300022722	Soil	PAAHKLLPPTLDWDVAPHVTANVRDKTVDVDLIYSVKAPK
Ga0224572_10435401	3300024225	Rhizosphere	ALKLLPPTLDWEVAPHVTANVRDKSVDVDLIYSVKAPK
Ga0208936_10002728	3300025404	Peatland	RKLLPASVDWEVSSHVTAISRDKTIDVDLQYMAKAPR
Ga0207692_108077941	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	EAHKLLPASLDWDVASHVTANVREKTVDVDLIYSAKAPR
Ga0207693_109604192	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	NSTYLSEYLPAAERLLPPTLDWEVSPHVTPNVRDKTVDVDLIYTAKAPK
Ga0207663_112161142	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	AQRLLPPTLDWEVSPHVTPNVRDKTVDVDLIYTAKAPK
Ga0207649_105262752	3300025920	Corn Rhizosphere	QRLLPPTLDWEVSPHVTANVKDKTVDVDLIYSAKAPK
Ga0207665_111068982	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MSWSRPGTIDEYLPAAQKLLPANLDWDVTPHVTANVRDKTVDVDIIYSV
Ga0209839_100109591	3300026294	Soil	YLPAAHKLLPPTLDWDVAPHVTANGRDKTVDVDLIYSVKAPK
Ga0209215_10202721	3300027266	Forest Soil	EYLPAAHKLLPSGLDWDVSPHVTANARDKTVDVDLIYSVKAPK
Ga0209580_102805142	3300027842	Surface Soil	FDATYLKQYLPEAQKLLPTRLDWDIAPHVTDNLRDKTVDVDFQLTVKAPK
Ga0209465_100031151	3300027874	Tropical Forest Soil	ARKILPANLDWDVASHVTANVKDKSVDVDLIYTAKAPK
Ga0209380_104980842	3300027889	Soil	PAALKLLPASLDWDVASHVTANVRDKSVDVDLIYSVKAPK
Ga0209624_106978491	3300027895	Forest Soil	QEYLPQARKLLTATVDWEVSSHTTANARDKTVDVDLQYSAKAPR
Ga0209698_102181703	3300027911	Watersheds	DQYLPAAQKLLPASLDWEVASHVTANVRDKTVDVDLVYSVKAPK
Ga0209168_101172763	3300027986	Surface Soil	LGEYLPDARKLLPSNFDWDVSSHVTANVREKTVDVDLIYAVKAAPK
Ga0265356_10424782	3300028017	Rhizosphere	TYLDEYLPAALKLLPPTLDWDVASHATANDRDKTVDIDLIYTVKAPK
Ga0302189_103319091	3300028788	Bog	QKLLPPTMDWEVTPHVTALSRDKTVDVDLQYTAKAPQ
Ga0302221_101431371	3300028806	Palsa	LLPPTLDWDVATHVTALTGNKTVDVDLQYTAKAPQ
Ga0308309_101329625	3300028906	Soil	PEARKLLPPSLDWEVDPHVTAITRDKTVDVDLQYTAKATQ
Ga0311368_102113741	3300029882	Palsa	KLLPASVDWEVSTHVTALVRDKTIDVDLQYMAKAPH
Ga0311371_102739631	3300029951	Palsa	PAAHKLLPGRFDWEVSSHVTANAKDKTVDVDLIYTVKAPK
Ga0302276_103078031	3300029992	Bog	PQARKLLPPSLDWEVSSHVTAIAREKTVDVDLQYTAKAPK
Ga0265750_10134221	3300030813	Soil	PAALKLLPPTLDWEVAPHVTANVRDKSVDVDLIYSVKAPK
Ga0170824_1167434971	3300031231	Forest Soil	QEYLPEALKLLPTALDWDVAPHVTANVRDKSVDVDLIYSVKAPK
Ga0170824_1171577432	3300031231	Forest Soil	ATYLGEYLPTAQKLLPAALDWEVASHVTANVRDKTVDVDLIYSVKAPK
Ga0170820_170772752	3300031446	Forest Soil	TYLGEYLPTAQKLLPAALDWEVASHVTANVRDKTVDVDLIYSVKAPK
Ga0310686_1067450006	3300031708	Soil	LPQARKLLPVTVDWDVSSHVTAIAREKTVDVDLQYTAKATH
Ga0307474_105624052	3300031718	Hardwood Forest Soil	QARRLLPASLDWEVEPHVTAMIRDKTVDVDLQYTAKAPR
Ga0307474_111895952	3300031718	Hardwood Forest Soil	DSTYLSEYLPAAHKLLPATLDWDVAPHVTANGRDKTVDVDLIYSVKAPK
Ga0307477_102150033	3300031753	Hardwood Forest Soil	LLPATLDWDVAPHVTANAHDKTVDVDLIYSVKAPK
Ga0307478_117531541	3300031823	Hardwood Forest Soil	TYLEQYLPEARKLLTANLDWLVSAHVTANVKDKTVDVDLIYSVKAPK
Ga0307479_119389371	3300031962	Hardwood Forest Soil	YVPQARKLLPASLDWDITPHVTANLRDKTVDVDFQLTPNAPK
Ga0306924_112709701	3300032076	Soil	ARKLLPSGLDWDVSSHVTANVRDKTVDVDLIYSVKAPK
Ga0335079_102123994	3300032783	Soil	ATYLSDYLAEAHELLPANLDWEVSSHVTANIREKTVDVDLIYSAKAPK
Ga0335079_107114481	3300032783	Soil	DSTYLSEYLPQARKLLPSSALDWEVQSHVTANVRDKTVDVDLIYTAKAVPL
Ga0335081_106377623	3300032892	Soil	NASYLDEYLPIAHKLLPSNFDWDVASHVTPNLRDKTVDVDLIYTVKALQSQ
Ga0335074_106520811	3300032895	Soil	LLPTTLDWDVASHVTPNIGDKTVDVDLIYTAKAPLSR
Ga0334847_020118_568_723	3300033826	Soil	VYDATYLSEYLPAAQKLLPPSLDWDVASHVTANIKDKTVDVDLIYSVKAPK

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084775

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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