NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F084794

Metagenome / Metatranscriptome Family F084794

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F084794
Family Type Metagenome / Metatranscriptome
Number of Sequences 112
Average Sequence Length 82 residues
Representative Sequence VTVAVFDLARSSSATIVLLVSDAQAVLRSMAGRVVIRPDGYIGLIAGAAEDVSGYFAQLTDDSLPSFPLGAKAHRGIIHIEGEAP
Number of Associated Samples 93
Number of Associated Scaffolds 112

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 80.36 %
% of genes near scaffold ends (potentially truncated) 24.11 %
% of genes from short scaffolds (< 2000 bps) 68.75 %
Associated GOLD sequencing projects 79
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (68.750 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere
(25.893 % of family members)
Environment Ontology (ENVO) Unclassified
(34.821 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(66.071 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 22.35%    β-sheet: 25.88%    Coil/Unstructured: 51.76%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 112 Family Scaffolds
PF08530PepX_C 26.79
PF02129Peptidase_S15 25.00
PF13474SnoaL_3 1.79
PF00903Glyoxalase 1.79
PF00106adh_short 0.89
PF05598DUF772 0.89
PF13271DUF4062 0.89
PF11774Lsr2 0.89
PF13683rve_3 0.89
PF16859TetR_C_11 0.89

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 112 Family Scaffolds
COG2936Predicted acyl esteraseGeneral function prediction only [R] 26.79


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms68.75 %
UnclassifiedrootN/A31.25 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003505|JGIcombinedJ51221_10191766All Organisms → cellular organisms → Bacteria829Open in IMG/M
3300004800|Ga0058861_11758152All Organisms → cellular organisms → Bacteria1167Open in IMG/M
3300005328|Ga0070676_10128604All Organisms → cellular organisms → Bacteria1599Open in IMG/M
3300005334|Ga0068869_100435274All Organisms → cellular organisms → Bacteria1084Open in IMG/M
3300005335|Ga0070666_10029968All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales3581Open in IMG/M
3300005337|Ga0070682_101102753All Organisms → cellular organisms → Bacteria665Open in IMG/M
3300005338|Ga0068868_100206852All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1638Open in IMG/M
3300005339|Ga0070660_100043871All Organisms → cellular organisms → Bacteria3418Open in IMG/M
3300005344|Ga0070661_100206461All Organisms → cellular organisms → Bacteria1502Open in IMG/M
3300005347|Ga0070668_101875407Not Available552Open in IMG/M
3300005354|Ga0070675_100060706All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales3121Open in IMG/M
3300005366|Ga0070659_100074510All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales2704Open in IMG/M
3300005434|Ga0070709_10014772All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia4424Open in IMG/M
3300005434|Ga0070709_10305234All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1163Open in IMG/M
3300005434|Ga0070709_10462647All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia957Open in IMG/M
3300005434|Ga0070709_10767428Not Available754Open in IMG/M
3300005434|Ga0070709_10879171All Organisms → cellular organisms → Bacteria707Open in IMG/M
3300005435|Ga0070714_101648450Not Available626Open in IMG/M
3300005436|Ga0070713_100337537All Organisms → cellular organisms → Bacteria1395Open in IMG/M
3300005436|Ga0070713_101252414Not Available718Open in IMG/M
3300005437|Ga0070710_10995403All Organisms → cellular organisms → Bacteria610Open in IMG/M
3300005439|Ga0070711_101492974All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300005455|Ga0070663_100661501Not Available884Open in IMG/M
3300005457|Ga0070662_100025056All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia4117Open in IMG/M
3300005458|Ga0070681_11793288Not Available540Open in IMG/M
3300005459|Ga0068867_100133805All Organisms → cellular organisms → Bacteria1930Open in IMG/M
3300005466|Ga0070685_10200286All Organisms → cellular organisms → Bacteria1297Open in IMG/M
3300005468|Ga0070707_102345708Not Available501Open in IMG/M
3300005536|Ga0070697_100075779All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2766Open in IMG/M
3300005538|Ga0070731_10005889All Organisms → cellular organisms → Bacteria9969Open in IMG/M
3300005545|Ga0070695_100050537All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2664Open in IMG/M
3300005546|Ga0070696_101151860Not Available654Open in IMG/M
3300005549|Ga0070704_100054228All Organisms → cellular organisms → Bacteria2836Open in IMG/M
3300005578|Ga0068854_100068673All Organisms → cellular organisms → Bacteria2585Open in IMG/M
3300005840|Ga0068870_10034433All Organisms → cellular organisms → Bacteria2592Open in IMG/M
3300005843|Ga0068860_100101323All Organisms → cellular organisms → Bacteria2748Open in IMG/M
3300006028|Ga0070717_10316654Not Available1389Open in IMG/M
3300006163|Ga0070715_10133244Not Available1198Open in IMG/M
3300006163|Ga0070715_10491753Not Available701Open in IMG/M
3300006175|Ga0070712_100202490All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1560Open in IMG/M
3300006175|Ga0070712_101265347Not Available642Open in IMG/M
3300006175|Ga0070712_101372065All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia616Open in IMG/M
3300006755|Ga0079222_10125373All Organisms → cellular organisms → Bacteria1408Open in IMG/M
3300009093|Ga0105240_11797600All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300009148|Ga0105243_10087744All Organisms → cellular organisms → Bacteria2554Open in IMG/M
3300009148|Ga0105243_12236346Not Available584Open in IMG/M
3300009174|Ga0105241_10080961All Organisms → cellular organisms → Bacteria2543Open in IMG/M
3300009176|Ga0105242_10099369All Organisms → cellular organisms → Bacteria2463Open in IMG/M
3300009545|Ga0105237_10840090Not Available925Open in IMG/M
3300010371|Ga0134125_12535155Not Available557Open in IMG/M
3300010373|Ga0134128_10594065Not Available1232Open in IMG/M
3300010373|Ga0134128_12989430Not Available520Open in IMG/M
3300012986|Ga0164304_10032895All Organisms → cellular organisms → Bacteria2673Open in IMG/M
3300012987|Ga0164307_10049580All Organisms → cellular organisms → Bacteria2401Open in IMG/M
3300013100|Ga0157373_10041178All Organisms → cellular organisms → Bacteria3304Open in IMG/M
3300013306|Ga0163162_11780871Not Available704Open in IMG/M
3300017792|Ga0163161_10064557All Organisms → cellular organisms → Bacteria2671Open in IMG/M
3300017792|Ga0163161_11078711Not Available689Open in IMG/M
3300020579|Ga0210407_10214828All Organisms → cellular organisms → Bacteria1496Open in IMG/M
3300020581|Ga0210399_10636123All Organisms → cellular organisms → Bacteria881Open in IMG/M
3300020582|Ga0210395_10481038All Organisms → cellular organisms → Bacteria934Open in IMG/M
3300021088|Ga0210404_10067297All Organisms → cellular organisms → Bacteria1732Open in IMG/M
3300021181|Ga0210388_11605299Not Available540Open in IMG/M
3300021401|Ga0210393_10468335All Organisms → cellular organisms → Bacteria1029Open in IMG/M
3300021402|Ga0210385_10151311All Organisms → cellular organisms → Bacteria1660Open in IMG/M
3300021403|Ga0210397_10707843All Organisms → cellular organisms → Bacteria774Open in IMG/M
3300021403|Ga0210397_11463048Not Available530Open in IMG/M
3300021404|Ga0210389_11273726Not Available564Open in IMG/M
3300022533|Ga0242662_10262240All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300022715|Ga0242678_1064764Not Available555Open in IMG/M
3300024290|Ga0247667_1012139All Organisms → cellular organisms → Bacteria1734Open in IMG/M
3300024331|Ga0247668_1005654All Organisms → cellular organisms → Bacteria2672Open in IMG/M
3300025898|Ga0207692_10004770All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae5388Open in IMG/M
3300025900|Ga0207710_10712507Not Available527Open in IMG/M
3300025906|Ga0207699_10635794Not Available779Open in IMG/M
3300025906|Ga0207699_11447899Not Available508Open in IMG/M
3300025907|Ga0207645_10108281All Organisms → cellular organisms → Bacteria1798Open in IMG/M
3300025915|Ga0207693_10213228All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1518Open in IMG/M
3300025917|Ga0207660_10770403Not Available785Open in IMG/M
3300025918|Ga0207662_10017079All Organisms → cellular organisms → Bacteria4101Open in IMG/M
3300025919|Ga0207657_10043036All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces3981Open in IMG/M
3300025922|Ga0207646_11306026Not Available633Open in IMG/M
3300025928|Ga0207700_10947943All Organisms → cellular organisms → Bacteria770Open in IMG/M
3300025928|Ga0207700_11410418Not Available619Open in IMG/M
3300025929|Ga0207664_10036006All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3823Open in IMG/M
3300025934|Ga0207686_10050667All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2583Open in IMG/M
3300025935|Ga0207709_10049720All Organisms → cellular organisms → Bacteria2561Open in IMG/M
3300025936|Ga0207670_10303871All Organisms → cellular organisms → Bacteria1250Open in IMG/M
3300025937|Ga0207669_10087108All Organisms → cellular organisms → Bacteria2022Open in IMG/M
3300025939|Ga0207665_10339862Not Available1131Open in IMG/M
3300025939|Ga0207665_11648522Not Available508Open in IMG/M
3300025961|Ga0207712_10345674All Organisms → cellular organisms → Bacteria1235Open in IMG/M
3300025981|Ga0207640_10053658All Organisms → cellular organisms → Bacteria2632Open in IMG/M
3300026023|Ga0207677_10156507All Organisms → cellular organisms → Bacteria1765Open in IMG/M
3300026089|Ga0207648_10084375All Organisms → cellular organisms → Bacteria2771Open in IMG/M
3300026118|Ga0207675_100068367All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3320Open in IMG/M
3300027459|Ga0207505_108638All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2527667Open in IMG/M
3300027869|Ga0209579_10008588All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales6447Open in IMG/M
3300031715|Ga0307476_10114329All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1917Open in IMG/M
3300031715|Ga0307476_10739037All Organisms → cellular organisms → Bacteria728Open in IMG/M
3300031715|Ga0307476_11202185Not Available555Open in IMG/M
3300031718|Ga0307474_10101879All Organisms → cellular organisms → Bacteria2146Open in IMG/M
3300031718|Ga0307474_10573766Not Available888Open in IMG/M
3300031718|Ga0307474_10733063All Organisms → cellular organisms → Bacteria781Open in IMG/M
3300031720|Ga0307469_10700038All Organisms → cellular organisms → Bacteria918Open in IMG/M
3300031740|Ga0307468_100087392Not Available1803Open in IMG/M
3300031820|Ga0307473_10085449All Organisms → cellular organisms → Bacteria1632Open in IMG/M
3300032180|Ga0307471_100906027All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1049Open in IMG/M
3300032205|Ga0307472_100149497All Organisms → cellular organisms → Bacteria1703Open in IMG/M
3300032895|Ga0335074_10035882All Organisms → cellular organisms → Bacteria6926Open in IMG/M
3300032955|Ga0335076_10591803Not Available991Open in IMG/M
3300033134|Ga0335073_10129212All Organisms → cellular organisms → Bacteria3228Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere25.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil12.50%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil9.82%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere5.36%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere5.36%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere4.46%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere3.57%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.68%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.68%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.68%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.68%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.68%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.79%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.79%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.79%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.79%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.79%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.79%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.89%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.89%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.89%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated0.89%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.89%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003505Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)EnvironmentalOpen in IMG/M
3300004800Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300022533Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022715Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024290Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08EnvironmentalOpen in IMG/M
3300024331Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027459Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-ROWE17-A (SPAdes)EnvironmentalOpen in IMG/M
3300027869Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032895Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M
3300033134Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGIcombinedJ51221_1019176623300003505Forest SoilMTAAVFDPARSSSATIVLLASDAQAVLRSMTGRVMIRPDGYTGLIAGAAGDVTGSFAQPTDDSLPGFPLGAKAHRGIIHIEGGAP*
Ga0058861_1175815223300004800Host-AssociatedVAVFDLARSSSAAIVLLVSDAQAVLRSMAGRVVIWPDGYIGLIAGAAEDVSGYFAQLTDDSLPSFPLGAEAHRGIIHIEGEAP*
Ga0070676_1012860413300005328Miscanthus RhizospherePRWHVTVAVFDLARSSSATIVLLVSDAQAVLWSMAGRVVIWPDGYIGLIAGAAEDLSGYFAQLTDDSLPSFPLGAKAHRGIIHIEGEAP*
Ga0068869_10043527413300005334Miscanthus RhizosphereVTVAVFDLARSSSAAIVLLVSDGQAVLRSMAGRVVIRPDGYIGLIAGAAEDVSGYFAQLTDDSLPSFPLGAEAHRGIIHIEGEAP*
Ga0070666_1002996823300005335Switchgrass RhizosphereVAVFDLARSSSAAIVLLVSDAQAVLRSMAGRVVIWPDGYIGLIAGAAGDVSGYFAQLTDDSLPSFPLGAKAHRGIIHIEGEAP*
Ga0070682_10110275323300005337Corn RhizosphereMTAAVPGLARSSSATIVLLVSDAQAVPRSMAGRVVIRPDGYIGLIAGAAEDVSGYFAQLTDDSLPSFSLGAKAHRGIIHIEGEAP*
Ga0068868_10020685223300005338Miscanthus RhizosphereVTVAVFDLARSSSATIVLLVSDAQAVLRSMAGRVVIRPDGYIGLIAGAAEDVSGYFTQLTDDSLPSFPLGAKAHRGIIHIEGEAP*
Ga0070660_10004387123300005339Corn RhizosphereVAVFDLARSSSATIVLLVSDAQAVLRSMAGRVVIWPDGYIGLIAGAAEDLSGYFAQLTDDSLPSFPLGAKAHRGIIHTEGEAP*
Ga0070661_10020646113300005344Corn RhizosphereVTVAVFDLARSSSAAIVLLVSDAQAVLRSMAGRVVIWPDGYIGLIAGAAEDVSGYFAQLTDDSLPSFSLGAKAHRGIIHIEGEAP*
Ga0070668_10187540713300005347Switchgrass RhizosphereVAVFDLARSSSATIVLLVSDAQAVLRSMAGRVVIWPDGYIGLIAGAAEDVSGYFAQLTDDSLPSFPLGAEAHRGIIHIEGEAP*
Ga0070675_10006070633300005354Miscanthus RhizosphereVAVFDLARSSSAAIVLLVSDAQAVLRSMAGRVVIWPDGYIGLIAGAAGDVSGYFAQLTDDSLPSFPLGAEARRGIIHIEGEAP*
Ga0070659_10007451023300005366Corn RhizosphereVAVFDLARSSSATIVLLVSDAQAVLRSMAGRVVIWPDGYIGLIAGAAEDLSGYFAQLTDDSLPSFPLGAEAHRGIIHIEGEAP*
Ga0070709_1001477223300005434Corn, Switchgrass And Miscanthus RhizosphereMTAAVPDLARSSSATSVLLVSDAQAVLRLMAGRVVIRRDGSIGLIAGAAEDVSGYFAQLTYDSLPGFPLGAKARRGIIHIEGEAP*
Ga0070709_1030523423300005434Corn, Switchgrass And Miscanthus RhizosphereVAVFDLARFSSATIVLPVSDAQAVLRSMAGRVVIRPDGDIGLIAGAAEDVSGYFAQLADDSLPGFPPGAKAHTGIIHIEGEAP*
Ga0070709_1046264723300005434Corn, Switchgrass And Miscanthus RhizosphereVTAAVFDLARSSSATIVLLVSDAQAVLRSMAGRVVIRPDGYIGLIAGAAEDVSGYFAQLTDDSLPGFPLGAKVHRGIIHIEGEAP*
Ga0070709_1076742813300005434Corn, Switchgrass And Miscanthus RhizosphereMTAAVPGLARSSSATIVLLVSDAQAVPRSMAGRVVIRPDGYLGLIAGAAEDVSGYFAQLTDDSLPSFSLGAKAHRGIIHIEGEAP*
Ga0070709_1087917113300005434Corn, Switchgrass And Miscanthus RhizosphereVTAAVFDPARCSSAAIVLPASDAQAVLRSLTGRVVIRPDGYTGLIAGAAGGLTGSFAQPTDDSLPGFPLGAKAHRGIIHIEGEAP*
Ga0070714_10164845013300005435Agricultural SoilVTVAVFDLARFSSATMGLLASDAQAVLRSMAGRVVIRPDGCIGLVAGAAEDVSGYFAQLTDDSLRSFPLGAKPHRGIIHIEGEAP*
Ga0070713_10033753723300005436Corn, Switchgrass And Miscanthus RhizosphereMTAAVPDLARSSSATIVLLVSDAQAVLRSMAGRVVIRPDGYIGLIAGAAEDVSGYFAQLTDDSLPGFPLGAKVHRGIIHIEGEAP*
Ga0070713_10125241423300005436Corn, Switchgrass And Miscanthus RhizosphereVAVFDLARFSSATMGLLASDAQAVLRSMAGRVVIRPDGCIGLVAGAAEDVSGYFAQLTDDSLRSFPLGAKPHRGIIHIEGEAP*
Ga0070710_1099540313300005437Corn, Switchgrass And Miscanthus RhizosphereDLARSSSATIVLLVSDAQAVLRSMAGRVVIRPDGYIGLIAGAAEDVSGYFAQLTDDSLPGFPLGAKVHRGIIHIEGEAP*
Ga0070711_10149297423300005439Corn, Switchgrass And Miscanthus RhizosphereATIVLLVSDAQAVLRSMAGRVVIRPDGYIGLIAGAAEDVSGYFAQLTDDSLPGFPLGAKVHRGIIHIEGEAP*
Ga0070663_10066150123300005455Corn RhizosphereVTVAVFDLARSSSATIVLLVSDAQAVLRSMAGRVVIWPDGYIGLIAGAAEDVSGYFAQLTDDSLPSFSLGAKAHRGIIHIEGEAP*
Ga0070662_10002505623300005457Corn RhizosphereVAVFDLARSSSAAIVLLVSDGQAVLRSMAGRVVIRPDGYIGLIAGAAEDVSGYFAQLTDDSLPSFPLGAEAHRGIIHIEGEAP*
Ga0070681_1179328813300005458Corn RhizosphereVAVFDLARSSSAAIVLLVSDGQAVLRSMAGRVVIRPDGYIGLIAGAAEDVSGYFAQLTDDSLPSFSLGAKAHRGIIHIEGEAP*
Ga0068867_10013380513300005459Miscanthus RhizosphereQRPSSLLVSDAQAVLRSMAGRVVIWPDGYIGLIAGAAEDLSGYFAQLTDDSLPSFPLGAKAHRGIIHTEGEAP*
Ga0070685_1020028613300005466Switchgrass RhizosphereVFDLARSSSAAIVLLVSDAQAVLRSMAGRVVIWPDGYIGLIAGAAEDVSGYFAQLTDDSLPSFPLGAEAHRGIIHIEGEAP*
Ga0070707_10234570813300005468Corn, Switchgrass And Miscanthus RhizosphereVTVAVFDLARSSSAAIVLLVSDAQAVLRSMAGRVVIWPDGYIGLIAGAAEDVSGYFAQLTDDSLPSFPLGAEAHRGIIHIEGEAP*
Ga0070697_10007577923300005536Corn, Switchgrass And Miscanthus RhizosphereVAVFDLARSSSATIVLLVSDTQAVLRSMAGRVVIRPDGYIGLIAGAAEDVSGYFAQLTDDSLPSFPLGAEAHRGIIHIEGEAP*
Ga0070731_10005889123300005538Surface SoilMTAAVFDLARSASGTIVVLVSDAQAGLRSLAGRVVIRPDGYIGLIAGAAGDAAGYLAQPADYSLPGFPLGAKAHRGNIRIEGEAP*
Ga0070695_10005053723300005545Corn, Switchgrass And Miscanthus RhizosphereVAVFDLARSSSATIVLLVSDAQAVLRSMAGRVVIRPDGYIGLIAGAAEDVSGYFAQLTDDSLPSFPLGAEARRGIIHIEGEAP*
Ga0070696_10115186013300005546Corn, Switchgrass And Miscanthus RhizosphereVTVAVFDLARSSSATIVLLVSDAQAVLRSMAGRVVIWPDGYIGLIAGAAEDLSGYFAQLTDDSLPSFPLGAKAHRGIIHIEGEAP*
Ga0070704_10005422833300005549Corn, Switchgrass And Miscanthus RhizosphereMTAAVPDLARSSSATIVLLVSDAQAVLRSMAGRVVIRPDGYIGLIAGAAEDVSGYFAQLTDDSLASFPLGAKAHRGIIHIEGEAP*
Ga0068854_10006867343300005578Corn RhizosphereAKPRWHVTVAVFDLARSSSATIVLLVSDAQAVLRSMAGRVVIRPDGYIGLIAGAAEDVSGYFAQLTDDSLPSFPLGAEAHRGIIHIEGEAP*
Ga0068870_1003443323300005840Miscanthus RhizosphereVTVAVFDLACSSSATIILLVSDEQAVLRSMAGRVVIRPDGYTGLIAGAAEDVSGYFAQLTDDSLPSFPLGAEAHRGIIHIEGEAP*
Ga0068860_10010132323300005843Switchgrass RhizosphereVTVAVFDLARSSSAAIVLLVSDAQAVLRSMAGRVVIWPDGYIGLIAGAAGDVSGYFAQLTDDSLPSFPLGAEAHRGIIHIEGEAP*
Ga0070717_1031665423300006028Corn, Switchgrass And Miscanthus RhizosphereMGLLASDAQAVLRSMAGRVVIRPDGCIGLVAGAAEDVPGYFAQLTDDSLRSFPLGAKPHRGIIHIEGEAP*
Ga0070715_1013324423300006163Corn, Switchgrass And Miscanthus RhizosphereMTAAVPGLARSSSATIVLLVSDAQAVPRSMAGRVVIRPDGYIGLIAGAAEDVSGYFAQLTDDSLPGFPLGAKVHRGIIHIEGEAP*
Ga0070715_1049175323300006163Corn, Switchgrass And Miscanthus RhizosphereVTVAVFDLARFSSATMGLLASDAQAVLRSMAGRVVIRPDGCIGLVAGAAEDVPGYFAQLTDDSLRSFPLGAKPHRGIIHIEGEAP*
Ga0070712_10020249023300006175Corn, Switchgrass And Miscanthus RhizosphereMTAAVLDLARSSSATIGLLVSDAQAVLRSMAGRVVIWPDGCIGLIAGAAEDVSGYFAQLADDSLPGFPLGAKAYRGIIHIEGEAS*
Ga0070712_10126534713300006175Corn, Switchgrass And Miscanthus RhizosphereVTVAVFDLARSSSAAIVLLVSDAQAVLRSMAGRVVIWPDGYIGLIAGAAGDVSGYFAQLTDDSLPSFPLGAEARRGIIHIEGEAP*
Ga0070712_10137206523300006175Corn, Switchgrass And Miscanthus RhizosphereAVFDLARSSSATIVLLVSDAQAVLRSMAGRVVIRPDGYIGLIAGAAEDVSGYFAQLTDDSLPGFPLGAKVHRGIIHIEGEAP*
Ga0079222_1012537323300006755Agricultural SoilMTAAVPGLARSSSATIVLLVSDAQAVPRSMAGRVVIRPDGYVGLIAGAAEDVSGYFAQLTDDSLPSFSLGAKAHTGIIHIEGEAP*
Ga0105240_1179760023300009093Corn RhizosphereVAVFDLARSSSATIVLLISDAQAVLRSMAGRVVIRPDGYIGLIAGAAEDVSGYFAQLTDDSLASFPLGAKAHRGIIHIEGEAP*
Ga0105243_1008774423300009148Miscanthus RhizosphereVAVFALARYSAETIVLLISDAQAVLRSMAGRVVIRPDGYIGLIAGAAEDVSGYFAQLTDDSPASFPLGAKAHRGIIHIEGEAP*
Ga0105243_1223634613300009148Miscanthus RhizosphereVAVFDLARSSSAAIVLLVSDAQAVLRSMAGRVVIWPDGYIGLIAGAAEDLSGYFAQLTDDSLPSFPLGAEAHRGIIHIEGEAP*
Ga0105241_1008096113300009174Corn RhizosphereLLVSDAQAVLRSMAGRVVIWPDGYIGLIAGAAEDVSGYFAQLTDDSLPSFPLGAEAHRGIIHIEGEAP*
Ga0105242_1009936923300009176Miscanthus RhizosphereVAVFDLARSSSAAIVLLVSDGQAVLRSMAGRVVIRPDGYIGLIAGAAEDVSGYFAQLTDDSLPSFPLGAKAHRGIIHIEGEAP*
Ga0105237_1084009013300009545Corn RhizosphereVAVFDLARASSAAIVLLVSDAQAVLRSMAGRVVIWPDGYIGLIAGAAEDLSGYFAQLTDDSLPSFPLGAKAHRGIIHIEGEAP*
Ga0134125_1253515523300010371Terrestrial SoilVAVFDLARSSSATIVLLVSDAQAVLRSMAGRVVIRPDGYIGLIAGAAEDVSGYFAQLTDDSLPSFPLGAKAHRGIIHIEGEAP*
Ga0134128_1059406513300010373Terrestrial SoilMTAAVLDLARSSSATIGLLVSDAQAVLRSMAGRVVIWPDGCIGLIAGAAEDVSGYFAQLADDSLSGFPLGAKAHRGIIHIEGEAS*
Ga0134128_1298943023300010373Terrestrial SoilVAVFDLARSSSAAIVLLVSDAQAVLRSMAGRVVIWPDGYIGLIAGAAEDVSGYFAQLTDDSLPSFPLGAEAHRGIIHIEGEVP*
Ga0164304_1003289513300012986SoilVAVFDLARSSSATIVLLVSDAQAVLRSMAGRVVIRPDGYIGLIAGAAEDVSGYFAQLTDDSLPSFSLGAKAHRGIIHIEGEAP*
Ga0164307_1004958033300012987SoilVAVFDLARSSSAAIVLLVSDAQAVLRSMAGRVVIRPDGYIGLIAGAAEDVSGYFAQLTDDSLPSFSLGAKAHRGIIHIEGEAP*
Ga0157373_1004117843300013100Corn RhizosphereVAVFDLARSSSAAIVLLVSDAQAVLRSMAGRVVIWPDGYIGLIAGAAGDVSGYFAQLTDDSLPSFPLGAEAHRGIIHIEGEAP*
Ga0163162_1178087113300013306Switchgrass RhizosphereVAVFDLARSSSATIVLLVSDAQAVLRSMAGRVVIRPDGYIGLIAGAAEDVSGYFAQLTDDSLPSFPLGAEAHRGIIHIEGEAP*
Ga0163161_1006455723300017792Switchgrass RhizosphereQWLSLIWDALRQRPSSLLVSDAQAVLRSMAGRVVIWPDGYIGLIAGAAEDVSGYFAQLTDDSLPSFPLGAEAHRGIIHIEGEAP
Ga0163161_1107871113300017792Switchgrass RhizosphereVTVAVFDLARSSSATIVLLVSDAQAVLRSMAGRVVIRPDGYIGLIAGAAEDVSGYFTQLTDDSLPSFPLGAKAHRGIIHIEGEAP
Ga0210407_1021482823300020579SoilVLLVSDAQAVLRAMAGHIVIQPDGYIGPIAGAAEDVSGYFAQLTDDSLPSFPLGAKAHRGIIHMEGEAP
Ga0210399_1063612313300020581SoilMAAAVFDLARSSSATIGLLVSDAQAVLRSLAGRVVIRPDGYIGLIAGAAGDVSGYFAQLTDDSLPSFPLGAKAHRGIIHIEGEAP
Ga0210395_1048103823300020582SoilVTAAVFVPARSSSATIVLLVSDAQAVLRSMAGRVVIRPDGYTGLIAGAAGDVTGSFAQSADDSLPSFPLGAKAHRAIIHIEGEAP
Ga0210404_1006729713300021088SoilMTAAVFDLARCSSATIVLLASDAQAVLRSLTGRVVIRPDGYTGLIAGAAGGLTGSFAQPTDDSLPSFPLGAKAHRGIIHIEGEAP
Ga0210388_1160529913300021181SoilMTAAVFDLARCSSATIALLASDAQAVLRSMTGRVVIRPDGYTGLIAGAAGGLTGSFAQPTDDSLPSFPLGA
Ga0210393_1046833513300021401SoilMTAAVFDPARCSSATIVLLASDAQAVLRSMTGRVVIRPDGYTGLIAGAAGGLTGSFAQPTDDSLPSFPLGAKAHRGIIHIEGEAP
Ga0210385_1015131113300021402SoilARSSSATIVLLVSDAQAVLRSMAGRVVIRPDGYTGLIAGAAGDVTGSFAQSADDSLPSFPLGAKAHRAIIHIEGEAP
Ga0210397_1070784313300021403SoilMTAAVFDPARSSSATIVLLASDAQAVLRSMTGRVMIRPDGYTGLIAGAAGDVTGSFAQPTDDSLPGFPLGAKAHRGIIHIEGGAP
Ga0210397_1146304813300021403SoilVTAAVFDLARCSSATIVLLVSDAQDVLRSMAGRVVIRPDGYIGLIAGAAGGVTGSFAQSADDSLPSFPLGAKAHKGIIHIEGEAP
Ga0210389_1127372613300021404SoilMTAAVFDPARSSSATIVLLASDAQAVLRSMTGRVMIRPDGYTGLIAGAAGDVTGSFAQPTDDSLPGFPLGAKAHRGIIHIEGEAA
Ga0242662_1026224023300022533SoilAVFDLARSSSATIVLLVSDAQAVLRSMAGRVVIRPDGYTGLIAGAAGDVSGYFAQLTDDSLPSFPPGAKAHRGIIHIEGEAP
Ga0242678_106476413300022715SoilVTAAVFDPARSSSATIVLLVSDAQAVLRSMAGRVVIRPDGYTGLIAGAAGDVTGSFAQSADDSLPSFPLGAKAHRAINHIEGEAP
Ga0247667_101213913300024290SoilAAIVLLVSDAQAVLRSMAGRVVIWPDGYIGLIAGAAEDVSGYFAQLTDDSLPSFPLGAEAHRGIIHIEGEAP
Ga0247668_100565413300024331SoilVLLVSDAQAVLRSMAGRVVIWPDGYIGLIAGAAEDVSGYFAQLTDDSLPSFPLGAEAHRGIIHIEGEAP
Ga0207692_1000477063300025898Corn, Switchgrass And Miscanthus RhizosphereMTAAVPGLARSSSATIVLLVSDAQAVPRSMAGRVVIRPDGYIGLIAGAAEDVSGYFAQLTDDSLPSFSLGAKAHRGIIHIEGEAP
Ga0207710_1071250713300025900Switchgrass RhizosphereVTVAVFDLARSSSAAIVLLVSDAQAVLRSMAGRVVIWPDGYIGLIAGAAEDVSGYFAQLTDDSLPSFPLGAEAHRGIIHIEGEAP
Ga0207699_1063579423300025906Corn, Switchgrass And Miscanthus RhizosphereVTAAVFDPARCSSAAIVLPASDAQAVLRSLTGRVVIRPDGYTGLIAGAAGGLTGSFAQPTDDSLPGFPLGAKAHRGIIHIEGEAP
Ga0207699_1144789923300025906Corn, Switchgrass And Miscanthus RhizosphereMTAAVPDLARSWSATSVLLVSDAQAVLRLMAGRVVIRGDGSIGLIAGAAEDVSGYFAQLTDDSLPGFPLGAKARRGIIHIEGEAP
Ga0207645_1010828113300025907Miscanthus RhizosphereVTVAVFDLARSSSATIVLLVSDTQAVLRSMAGRVVIRPDGYIGLIAGAAEDLSGYFAQLTDDSLPSFPLGAKAHRGIIHIEGEAP
Ga0207693_1021322823300025915Corn, Switchgrass And Miscanthus RhizosphereMTAAVLDLARSSSATIGLLVSDAQAVLRSMAGRVVIWPDGCIGLIAGAAEDVSGYFAQLADDSLSGFPLGAKAHRGIIHIEGEAS
Ga0207660_1077040313300025917Corn RhizosphereVTVAVFDLARSSSAAIVLLVSDAQAVLRSMAGRVVIWPDGYIGLIAGAAEDLSGYFAQLTDDSLPSFPLGAEAHRGIIHIEGEAP
Ga0207662_1001707943300025918Switchgrass RhizosphereVTVAVFDLARSSSAAIVLLVSDAQAVLRSMAGRVVIWPDGYIGLIAGAAEDVSGYFAQLTDDSLPSFPLGAEAHRGIIHTEGEAP
Ga0207657_1004303623300025919Corn RhizosphereVTVAVFDLARSSSAAIVLLVSDAQAVLRSMAGRVVIWPDGYIGLIAGAAEDLSGYFAQLTDDSLPSFPLGAKAHRGIIHIEGEAP
Ga0207646_1130602623300025922Corn, Switchgrass And Miscanthus RhizosphereVTVAVFDLARSSSAAIVLLVSDAQAVLRSMAGRVVIWPDGYIGLIAGAAEDVSGYFAQLTDDSLPSFPLGAEAH
Ga0207700_1094794323300025928Corn, Switchgrass And Miscanthus RhizosphereMTAAVPDLARSSSATIVLLVSDAQAVLRSMAGRVVIRPDGYIGLIAGAAEDVSGYFAQLTDDSLPGFPLGAKVHRGIIHIEGEAP
Ga0207700_1141041813300025928Corn, Switchgrass And Miscanthus RhizosphereVTVAVFDLARFSSATMGLLASDAQAVLRSMAGRVVIRPDGCIGLVAGAAEDVSGYFAQLTDDSLRSFPLGAKPHRGIIHIEGEAP
Ga0207664_1003600623300025929Agricultural SoilVAVFDLARSSSATIVLLVSDAQAVLRSMAGRVVIRPDGYIGLIAGAAEDVSGYFAQLTDDSLPGFPLGAKVHRGIIHIEGEAP
Ga0207686_1005066733300025934Miscanthus RhizosphereVTVAVFDLARSSSATIVLLISDTQAVLRSMAGRVVIRPDGYIGLIAGAAEDVSGYFAQLTDDSLPSFPLGAEARRGIIHIEGEAP
Ga0207709_1004972013300025935Miscanthus RhizosphereVTVAVFDLARSSSAAIVLLVSDAQAVLRSMAGRVVIWPDGYIGLIAGAAEDVSGYFAQLTDDSLPSFPLGAKAHRGIIHIEGEAP
Ga0207670_1030387123300025936Switchgrass RhizosphereQRPSSLLVSDAQAVLRSMAGRVVIWPDGYIGLIAGAAEDVSGYFAQLTDDSLPSFPLGAKAHRGIIHIEGEAP
Ga0207669_1008710813300025937Miscanthus RhizosphereLARSSSATIVLPVSDAQAVLRSMAGRVVIRPDGYTGLIAGAAEDVSGYFAQLTDDSLPSFPLGAEAHRGIIHIEGEAP
Ga0207665_1033986213300025939Corn, Switchgrass And Miscanthus RhizosphereMTAAVPGLARSSSATIVLLVSDAQAVPRSMAGRVVIRPDGYLGLIAGAAEDVSGYFAQLTDDSLPSFSLGAKAH
Ga0207665_1164852213300025939Corn, Switchgrass And Miscanthus RhizosphereMTAAVPDLARSSSATSVLLVSDAQAVLRLMAGRVVIRRDGSIGLIAGAAEDVSGYFAQLTYDSLPGFPLGAQARR
Ga0207712_1034567423300025961Switchgrass RhizosphereVAVFDLARSSSAAIVLLVSDAQAVLRSMAGRVVIWPDGYIGLIAGAAEDVSGYFAQLTDDSLPSFPLGAEAHRGIIHIEGEAP
Ga0207640_1005365823300025981Corn RhizosphereAKPRWHVTVAVFDLARSSSATIVLLVSDAQAVLRSMAGRVVIRPDGYIGLIAGAAEDVSGYFAQLTDDSLPSFPLGAEAHRGIIHIEGEAP
Ga0207677_1015650723300026023Miscanthus RhizosphereVTVAVFDLARSSSATIVLLISDTQAVLRSMAGRVVIRPDGYIGLIAGAAEDVSGYFTQLTDDSLPSFPLGAKAHRGIIHIEGEAP
Ga0207648_1008437523300026089Miscanthus RhizosphereVTVAVFDLARSSSATIVLLVSDTQAVLRSMAGRVVIRPDGYIGLIAGAAEDLSGYFAQLTDDSLPSFPLGAKAHRGIIHTEGEAP
Ga0207675_10006836723300026118Switchgrass RhizosphereVAVFDLARSSSATIVLLVSDGQAVLRSMAGRVVIRPDGYIGLIAGAAEDVSGYFAQLTDDSLPSFPLGAEAHRGIIHIEGEAP
Ga0207505_10863823300027459SoilVTVAVFDLARSSSAAIVFARQRCAGRSAVNGGPCRPDGYIGLIAGAAEDVSGYFAQLTDDSLPSFSLG
Ga0209579_1000858823300027869Surface SoilMTAAVFDLARSASATIVVLVSDAQAVLRSLAARVVIRPDGYIGLIAGAAGYLAQPADYSLPGFPFGAKAHRGIIRIEGEAP
Ga0307476_1011432923300031715Hardwood Forest SoilMTAAVFDLARSSSATIVLLVSDAQAVLWSMAGRVVIRPDGYIGLIAGAAEDVSGYFAQLTDDSLPSFPLGAKAHRGIIHIEGEAP
Ga0307476_1073903713300031715Hardwood Forest SoilSSATIVLLASDAQAVLRSMMGRVMIRPDGYTGLIAGAAGDVTGSFAQPTDDSLPGFPLGAKAHRGIIHIEGGAP
Ga0307476_1120218523300031715Hardwood Forest SoilMTAAVFDPARSSSATIVLLASDAQPVLRSMAGSVVIRPDGCTGLIAGAAGDVTGSFAQPTDDSLLSFPLGAKAHRGIIHIEGEAP
Ga0307474_1010187913300031718Hardwood Forest SoilMTAAVFDPARCSSATIVLLASDAQAVLRSMTGRVVIRPDGCTGLIAGAAGDVTGSFAQPTDDSLLSFPLGAKAHRGIIHIEGEAP
Ga0307474_1057376613300031718Hardwood Forest SoilMTAAVFDLARSASGTIVVLVSDAQAGLRSLAGRVVIRPDGYIGLIAGAAGDAAGYLAQPADYSLPGFPLGAKAHRGIIRIEGEAP
Ga0307474_1073306313300031718Hardwood Forest SoilMTAAVFDLARSSSATIVLLVSDAQAVLWSMAGRVAIRPDGYIGLIAGAAVDVSGYFAQLTDDSLPSFPLGAEAHRGIIHIEGEAP
Ga0307469_1070003813300031720Hardwood Forest SoilLLVSDGQAVLRSMAGRVVIRPDGYIGLIAGAAEDVSGYFAQLTDDSLPSFPLGAKAHRGIIHIEGEAP
Ga0307468_10008739223300031740Hardwood Forest SoilVAVFDLARSSSAAIVLLVSDAQAVLRSMAGRVVIRPDGYIGLIAGAAEDVSGYFAQLTDDSLPGFLLGAKVHRGIIHIEGEAP
Ga0307473_1008544923300031820Hardwood Forest SoilMTAAVLDLARSSSATIVLLVSDAQDVLRSMAGRVVIRPDGYIGLIAGAAEDVSGYFAQLTDDSLPSFSLGAKAHRGIIHIEGEAP
Ga0307471_10090602713300032180Hardwood Forest SoilVAVFDLARSSSATIVLLVSDAQAVLRSMAGRVVIRPDGYIGLIAGAAEDVSGYFAQLTDDSLPGFPLGAKAHRGIIHIEG
Ga0307472_10014949713300032205Hardwood Forest SoilVTVAVFDLARSSSATIVLLVSDAQAVLRSMAGRVVIRPDGYIGLIAGAAEDVSGYFAQLTDDSLPSFPLGAKAHRGIIHIEGEAP
Ga0335074_1003588253300032895SoilMAAAVFDLARSSSATIVLLISDAQAVLRSLAGRVVIRPDGYIGQVAGAAEDVTGSFAQPADHSLPSFPLGAKAHRGIIHVEGEAP
Ga0335076_1059180323300032955SoilMAAAVFDLARSSSATIVLLISDAQAVLRSLAGRVVIRPDGYIGQVAGAAEDVTGSFAQPVDHSLPSFPLGPKAHRGIIHVESGREQAR
Ga0335073_1012921213300033134SoilMAAAVFDLARSSSATIVLLISDAQAVLRSLAGRVVIRPDGYIGQVAGAAEDVTGSFAQPADHSLPSFPLGAKAHRGIIHVESGREQ


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.