Metagenome Family F084928

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084928
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	79 residues
Representative Sequence	MDKHKILADAKAELERHVWGTFVEGKASVALGGTGVVVSGCEACRKRFGTNSQYLRHLSDDVLPNILQRAFEITGVSTSK
Number of Associated Samples	50
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	39.09 %
% of genes near scaffold ends (potentially truncated)	24.32 %
% of genes from short scaffolds (< 2000 bps)	74.77 %
Associated GOLD sequencing projects	48
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (65.766 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (56.757 % of family members)
Environment Ontology (ENVO)	Unclassified (57.658 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (69.369 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.07% β-sheet: 0.00% Coil/Unstructured: 50.93%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF01904	DUF72	20.72
PF00072	Response_reg	6.31
PF13430	DUF4112	3.60
PF00753	Lactamase_B	3.60
PF07589	PEP-CTERM	2.70
PF03544	TonB_C	1.80
PF01161	PBP	1.80
PF11066	DUF2867	0.90
PF00343	Phosphorylase	0.90
PF01037	AsnC_trans_reg	0.90
PF00096	zf-C2H2	0.90
PF09509	Hypoth_Ymh	0.90
PF13620	CarboxypepD_reg	0.90
PF07238	PilZ	0.90
PF03992	ABM	0.90
PF12116	SpoIIID	0.90
PF00144	Beta-lactamase	0.90
PF00754	F5_F8_type_C	0.90
PF04964	Flp_Fap	0.90
PF00239	Resolvase	0.90
PF06745	ATPase	0.90
PF00881	Nitroreductase	0.90
PF01507	PAPS_reduct	0.90
PF14224	DUF4331	0.90
PF10518	TAT_signal	0.90
PF07040	DUF1326	0.90
PF00085	Thioredoxin	0.90
PF13083	KH_4	0.90
PF00561	Abhydrolase_1	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	20.72
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	1.80
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	1.80
COG0058	Glucan phosphorylase	Carbohydrate transport and metabolism [G]	0.90
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.90
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.90
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.90
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.90
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.90
COG3847	Flp pilus assembly protein, pilin Flp	Extracellular structures [W]	0.90
COG5588	Uncharacterized conserved protein, DUF1326 domain	Function unknown [S]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.77 %
Unclassified	root	N/A	34.23 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.77 %
Unclassified	root	N/A	34.23 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.77 %
Unclassified	root	N/A	34.23 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	39.64 %
Unclassified	root	N/A	34.23 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.23 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	17.12 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	9.01 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.23 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.12 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	9.01 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.23 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.12 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6.31 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.23 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.12 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3.60 %
Occallatibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter	0.90 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.23 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.12 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3.60 %
Occallatibacter riparius	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	0.90 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.23 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.12 %
Candidatus Koribacter versatilis Ellin345	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	3.60 %
Occallatibacter riparius	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	0.90 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005436\|Ga0070713_100428157	Not Available	1240	Open in IMG/M
3300005538\|Ga0070731_10076833	All Organisms → cellular organisms → Bacteria	2215	Open in IMG/M
3300005538\|Ga0070731_10261921	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1148	Open in IMG/M
3300006028\|Ga0070717_10361335	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1300	Open in IMG/M
3300006102\|Ga0075015_100808196	Not Available	563	Open in IMG/M
3300012202\|Ga0137363_10443394	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	1086	Open in IMG/M
3300020579\|Ga0210407_10019552	All Organisms → cellular organisms → Bacteria → Acidobacteria	5030	Open in IMG/M
3300020579\|Ga0210407_10024430	Not Available	4492	Open in IMG/M
3300020579\|Ga0210407_10728469	Not Available	768	Open in IMG/M
3300020580\|Ga0210403_10290618	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1339	Open in IMG/M
3300020580\|Ga0210403_10362560	Not Available	1185	Open in IMG/M
3300020580\|Ga0210403_10685322	Not Available	822	Open in IMG/M
3300020580\|Ga0210403_11294903	Not Available	557	Open in IMG/M
3300020581\|Ga0210399_10002835	All Organisms → cellular organisms → Bacteria	13496	Open in IMG/M
3300020581\|Ga0210399_10003024	All Organisms → cellular organisms → Bacteria → Acidobacteria	13075	Open in IMG/M
3300020581\|Ga0210399_10008245	All Organisms → cellular organisms → Bacteria	8137	Open in IMG/M
3300020581\|Ga0210399_10010389	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7293	Open in IMG/M
3300020581\|Ga0210399_10114514	Not Available	2212	Open in IMG/M
3300020581\|Ga0210399_10144092	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	1968	Open in IMG/M
3300020581\|Ga0210399_10327734	All Organisms → cellular organisms → Bacteria	1278	Open in IMG/M
3300020581\|Ga0210399_10537183	Not Available	970	Open in IMG/M
3300020581\|Ga0210399_10979957	All Organisms → cellular organisms → Bacteria → Acidobacteria	682	Open in IMG/M
3300020581\|Ga0210399_11107208	Not Available	633	Open in IMG/M
3300020581\|Ga0210399_11152536	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300020582\|Ga0210395_10094702	All Organisms → cellular organisms → Bacteria	2206	Open in IMG/M
3300020582\|Ga0210395_10131343	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	1863	Open in IMG/M
3300020582\|Ga0210395_10237439	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1369	Open in IMG/M
3300020583\|Ga0210401_10016083	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7229	Open in IMG/M
3300020583\|Ga0210401_10088336	All Organisms → cellular organisms → Bacteria	2916	Open in IMG/M
3300020583\|Ga0210401_10988039	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300020583\|Ga0210401_11195206	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300021168\|Ga0210406_10199674	All Organisms → cellular organisms → Bacteria	1659	Open in IMG/M
3300021168\|Ga0210406_10269909	All Organisms → cellular organisms → Bacteria	1391	Open in IMG/M
3300021168\|Ga0210406_10275736	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1374	Open in IMG/M
3300021168\|Ga0210406_10300615	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1305	Open in IMG/M
3300021168\|Ga0210406_10514330	Not Available	945	Open in IMG/M
3300021168\|Ga0210406_11332258	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300021171\|Ga0210405_11184227	Not Available	567	Open in IMG/M
3300021178\|Ga0210408_10177816	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	1690	Open in IMG/M
3300021180\|Ga0210396_10148896	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2103	Open in IMG/M
3300021180\|Ga0210396_10314691	Not Available	1384	Open in IMG/M
3300021180\|Ga0210396_10570704	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	985	Open in IMG/M
3300021181\|Ga0210388_11457861	Not Available	573	Open in IMG/M
3300021401\|Ga0210393_10107680	All Organisms → cellular organisms → Bacteria → Acidobacteria	2222	Open in IMG/M
3300021403\|Ga0210397_10002557	All Organisms → cellular organisms → Bacteria → Acidobacteria	11436	Open in IMG/M
3300021403\|Ga0210397_10178039	All Organisms → cellular organisms → Bacteria	1506	Open in IMG/M
3300021404\|Ga0210389_10030641	All Organisms → cellular organisms → Bacteria → Acidobacteria	4135	Open in IMG/M
3300021404\|Ga0210389_10796433	Not Available	738	Open in IMG/M
3300021406\|Ga0210386_10036612	All Organisms → cellular organisms → Bacteria → Acidobacteria	3867	Open in IMG/M
3300021406\|Ga0210386_10237986	Not Available	1551	Open in IMG/M
3300021406\|Ga0210386_11256058	Not Available	625	Open in IMG/M
3300021407\|Ga0210383_10193719	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	1737	Open in IMG/M
3300021407\|Ga0210383_10582362	Not Available	965	Open in IMG/M
3300021432\|Ga0210384_10479478	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1120	Open in IMG/M
3300021432\|Ga0210384_11044065	Not Available	720	Open in IMG/M
3300021474\|Ga0210390_10455277	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1080	Open in IMG/M
3300021474\|Ga0210390_11151632	Not Available	628	Open in IMG/M
3300021475\|Ga0210392_10183274	All Organisms → cellular organisms → Bacteria → Acidobacteria	1452	Open in IMG/M
3300021475\|Ga0210392_10507888	Not Available	888	Open in IMG/M
3300021477\|Ga0210398_10428765	Not Available	1078	Open in IMG/M
3300021477\|Ga0210398_10721486	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	806	Open in IMG/M
3300021478\|Ga0210402_10407742	Not Available	1262	Open in IMG/M
3300021478\|Ga0210402_10837910	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300021478\|Ga0210402_11089690	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	726	Open in IMG/M
3300021559\|Ga0210409_10045327	All Organisms → cellular organisms → Bacteria	4154	Open in IMG/M
3300021559\|Ga0210409_11300105	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300021559\|Ga0210409_11619817	Not Available	523	Open in IMG/M
3300021559\|Ga0210409_11627479	Not Available	522	Open in IMG/M
3300021560\|Ga0126371_10528185	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1329	Open in IMG/M
3300027109\|Ga0208603_1030458	Not Available	848	Open in IMG/M
3300027575\|Ga0209525_1000036	All Organisms → cellular organisms → Bacteria	52685	Open in IMG/M
3300027576\|Ga0209003_1069856	Not Available	644	Open in IMG/M
3300027605\|Ga0209329_1002126	All Organisms → cellular organisms → Bacteria	3068	Open in IMG/M
3300027867\|Ga0209167_10003846	All Organisms → cellular organisms → Bacteria → Acidobacteria	7719	Open in IMG/M
3300027869\|Ga0209579_10009430	All Organisms → cellular organisms → Bacteria	6090	Open in IMG/M
3300027869\|Ga0209579_10170195	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1164	Open in IMG/M
3300027895\|Ga0209624_10596359	All Organisms → cellular organisms → Bacteria → Acidobacteria	733	Open in IMG/M
3300027908\|Ga0209006_10095344	All Organisms → cellular organisms → Bacteria	2641	Open in IMG/M
3300027908\|Ga0209006_10564794	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300028906\|Ga0308309_11650071	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300031057\|Ga0170834_100608141	Not Available	548	Open in IMG/M
3300031057\|Ga0170834_103608574	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300031057\|Ga0170834_108724983	Not Available	585	Open in IMG/M
3300031128\|Ga0170823_12732025	All Organisms → cellular organisms → Bacteria	2368	Open in IMG/M
3300031231\|Ga0170824_102050479	Not Available	1181	Open in IMG/M
3300031231\|Ga0170824_103586613	Not Available	798	Open in IMG/M
3300031231\|Ga0170824_111465090	Not Available	917	Open in IMG/M
3300031231\|Ga0170824_117437881	All Organisms → cellular organisms → Bacteria	1508	Open in IMG/M
3300031231\|Ga0170824_119276251	Not Available	617	Open in IMG/M
3300031715\|Ga0307476_10767320	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	714	Open in IMG/M
3300031718\|Ga0307474_10201104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1516	Open in IMG/M
3300031718\|Ga0307474_11082785	All Organisms → cellular organisms → Bacteria → Acidobacteria	634	Open in IMG/M
3300031720\|Ga0307469_10528266	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1040	Open in IMG/M
3300031720\|Ga0307469_10677272	Not Available	932	Open in IMG/M
3300031720\|Ga0307469_10982107	Not Available	787	Open in IMG/M
3300031753\|Ga0307477_10033436	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3524	Open in IMG/M
3300031753\|Ga0307477_10516242	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	811	Open in IMG/M
3300031754\|Ga0307475_10022407	All Organisms → cellular organisms → Bacteria	4465	Open in IMG/M
3300031820\|Ga0307473_10199239	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1187	Open in IMG/M
3300031823\|Ga0307478_10054610	All Organisms → cellular organisms → Bacteria	2973	Open in IMG/M
3300031823\|Ga0307478_10430751	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300031962\|Ga0307479_10582382	Not Available	1101	Open in IMG/M
3300031962\|Ga0307479_10840617	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300031962\|Ga0307479_10956003	All Organisms → cellular organisms → Bacteria → Acidobacteria	827	Open in IMG/M
3300032180\|Ga0307471_100385182	All Organisms → cellular organisms → Bacteria	1524	Open in IMG/M
3300032180\|Ga0307471_101415050	Not Available	855	Open in IMG/M
3300032205\|Ga0307472_100391669	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1158	Open in IMG/M
3300032205\|Ga0307472_100523874	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300032205\|Ga0307472_101061608	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300032770\|Ga0335085_10061048	All Organisms → cellular organisms → Bacteria → Acidobacteria	5034	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.10%
Aquatic	Environmental → Aquatic	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.10%
Sediment	Environmental → Aquatic → Sediment	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	89.19%
Loam	Environmental → Terrestrial → Soil → Loam	9.01%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.90%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.90%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	82.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.21%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	6.31%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	56.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	18.02%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	8.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.31%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.80%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.90%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070713_1004281571	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	GRERSLQEAKGELERHIWGTFVEGNMSVARGGASVIAFRCEACRKRFGTNSQYLRHLVDDAVSAACS*
Ga0070731_100768333	3300005538	Surface Soil	MDKARILQEAKAELERHIWGTFVEGKATVALGGAGVVVSGGEACRKRFGTNSQYLRHLSDHVLPVILRKAFEIAGVSTSK*
Ga0070731_102619212	3300005538	Surface Soil	MDKHKILVEAKAELERHVWGTFVEGKATVALGGTGVVVSGCEACRKRFGTNSQYLRHLSDDVLPNILRKAFEIGQSAP*
Ga0070717_103613353	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MDKDKILADAKAELERHVWGTFVEGKASVALGGAGVVVSGCEACRKRFGTNSQYLRHLAEDVLPGILENAFKQS*
Ga0075015_1008081962	3300006102	Watersheds	MDKVKILQAAKVELMWHSWDTFVDDPPSVAQGGKGVIVTGYTGCTACKKRTNTNAQYLEHLADDVLPVILQQAFATAREPDKQ*
Ga0137363_104433941	3300012202	Vadose Zone Soil	MGRCYSVEMDKHKILADAKAELERHIWGTFVEGKATVALGGTGVVVSGCEAWRKRFGTNSQYLRHLSDDVLPNILQRAFEIAGVSTSK*
Ga0210407_100195524	3300020579	Soil	VLTGRCYSVEMDKHKILADAKAELERHVWGTFVEGKASVALGGTGVVVSGCEACRKRFGTNSQYLRHLADDVLPRIFEEVLSKARS
Ga0210407_100244302	3300020579	Soil	VLTGKCYSVEMDKHKMLADAKAELQRHVWGTFVDGKASVANSGTGVVVSGCEACRKRFGTNSQYLRHLAEDVLPEILENTFKQS
Ga0210407_107284692	3300020579	Soil	ILADAKAELERHVWGTFVEGKASVALGGTGVVVSGCEACRKRFGTNSQYLRHLSEDVLPNILRKAFEIAGVLTSK
Ga0210403_102906182	3300020580	Soil	MDKHKILLEAKAELERHVWGAFVEGKATVALGGTAVIVSGCEACRKRFGTNSQYLRHLSDDVLPLILRKAFEIAGVSTSK
Ga0210403_103625601	3300020580	Soil	VLTGKCYSVEMDKHKMLADAKAELERHVWGTFVDGKASVANSGTGVVVSGCEACRKRFGTNSQYLRHLAEDVLPEILENTFKQS
Ga0210403_106853221	3300020580	Soil	MDREKILQEAEAELERHIWGTFVEGKATVALGGTGVVVSGCEACRKRFGTNSQYLRHLADDVLPAIIEGAFSAVRS
Ga0210403_112949031	3300020580	Soil	MNRKRILQEAKAELERHVWGTFVEGKATVALGGTGVVVSGCEACRKRFGTNSQYLRHLAEDILPQIIEGVLSATTIPSDLPMSSHSQHKI
Ga0210399_100028353	3300020581	Soil	MDKHKILLEAKAELERHVWGTFVEGKAPVALGGTGVIVSGCEACRKRFGTNSQYLRHLSDDVLPSILQRAFEIAGVSTSK
Ga0210399_1000302419	3300020581	Soil	MDKHKILADAKAELERHVWGTFVEGKASVALGGTGVVVSGCEACRKRFGTNSQYLRHLADDVLPRIFEEVLSKARS
Ga0210399_100082457	3300020581	Soil	VLTGRCYSVEMDKHKILADAKAELERHVWGTFVEGKASVALGGTGVVVSGCEACRKRFGTNSQYLRHLSDDVLPNILRKAFEIAGVPTSK
Ga0210399_100103894	3300020581	Soil	VLTGKCYSVEMDKHKMLADAKAELQRHVWGTFVDGKASVANSGTCVVVSGCEACRKRFGTNSQYLRHLAEDVLPEILENTFKQS
Ga0210399_101145142	3300020581	Soil	MLECYSVEMDKHKILADAKAELERHIWGAFVEGKASVALGGTGIVVSGCKACRKRFGTNSQYLRRLADDVLPGLLKEVFSAGSIELLEWPPNG
Ga0210399_101440925	3300020581	Soil	ILADAKAELERHIWGTFVEGKASVALGGTGVVVSGCEACRKKFGTNSQYLRHLADDVLPGIIEGILS
Ga0210399_103277341	3300020581	Soil	MNRKRILQEAKAELERHVWGTFVEGKATVALGGTGVVVSGCEACRKRFGTNSQYLRHLAEDILPQIIEGVLSATTIPSD
Ga0210399_105371832	3300020581	Soil	MDKHKILAEAKAELERHVWGTFVEGKASVALGGTGVVVSGCEACRKRFGTNSQYLRHLSDDVLPNILQRAFEMTGVSTSK
Ga0210399_109799572	3300020581	Soil	MDKARILQEAKAELERHIWGTFVEGKATVALGGAGVVVSGGEACRKRFGTNSQYLRHLSDHVLQVILRKAFQVAEGLQK
Ga0210399_111072081	3300020581	Soil	TDGVLTIAMLECYSVEMDKHKSLADAKAELERHVWGTFVEGKASVALGGTGVVVSGCEDCRKRFGTKSQYLRHLADDVLPFILRKAFEIAGVPTSKQSRHSAP
Ga0210399_111525362	3300020581	Soil	EKIIQEAKAELERHIWGTFVEGKATVALGGTGVVVSGCEAGRRRFGTNSQYLRHLADDVLPTILGRAFETAAEK
Ga0210395_100947022	3300020582	Soil	MDKANILAEAKAELERHVWGTFVEGEASVALGGTGVIVSGCEACRKRFGTNSQYLRHLTDDVLPIILRKAFEMIVRD
Ga0210395_101313433	3300020582	Soil	MDKHKILADAKAELERHVWGTFVEGKASVALGGTGVVVSGCEACRKRFGTNSQYLRHLSDDVLPNILQRAFEITGVSTSK
Ga0210395_102374391	3300020582	Soil	LYRMDNETKVRLLQSAKAELERHVWGTFVEGKASVALGGTGVIVSGCEACRKLGTNSQYLRHLSDDVVPLILRKAFEIAGVPTSK
Ga0210401_1000642914	3300020583	Soil	MLECYSVEMDKHKILVDAKAELERHVWGTFVEGKASVALGGTGVVVSGCEACRKRFGTNSQYLRHLSDDVLPNILQKGFPDCRRFDFEIIVER
Ga0210401_100160834	3300020583	Soil	MDKHKILADAKAELERHVWGTFVDGKASVANSGTGVVVSGCEACRKRFGTNSQYLRHLAEDVLPEILENTFKQS
Ga0210401_100883365	3300020583	Soil	MDKAKILAEAKAELERLVWGTFVEGKASVALGGTGVVVSGCEACRKRFGTNSQYLRHLADDVLPGIIQDAFSAARS
Ga0210401_109880391	3300020583	Soil	LVKHVWGTFVEGKATVALGGTGVVVSGCEACCKRFGTNSQYLRHLADDVLPLIVRKAFEIAGVSISK
Ga0210401_111952062	3300020583	Soil	MDKHKILAEAKAELERHVWGTFVEGKASVALGGSGVVVSGCEACRKRFGTNSQYLRHLADDVLPGINVGAIS
Ga0210406_101996743	3300021168	Soil	MLECYSVEMDKHKILVDAKAELERHVWGTFVEGKATVALGGTGVVVSGCEACCKRFGTNSQYLRHLADDVLPLIVRKAFEIAGVSISK
Ga0210406_102699092	3300021168	Soil	MDNETKVRILQSAKAELERHVWGTFVEGKASVALGGTGVVVSGCEACRKRFGTNSQYLRHLSEDVLPDIIDRAVSAGRS
Ga0210406_102757363	3300021168	Soil	MDKDKILVDAKAELERHVWGTFFEGKATVALGGTGVVVSGCEACRKRFGTNSQYLRHLSDDVLPVILRKAFEIAGVPTSK
Ga0210406_103006152	3300021168	Soil	MDKHKILADAKAELERHVWGTFVEGKASVALGGTGVVVSGCEACRKRFGTNSQYLRHLADDVLPGILESVLPSN
Ga0210406_105143303	3300021168	Soil	MNREMILREAKAELERHVWGTFVEGKSSVALGGTGVVVSGCEACRKRFGTNSQYLRHLADDVLPDIIDRAVSAVRS
Ga0210406_113322582	3300021168	Soil	MDKYKILVDAKAELERHVWGTFVEGKASVALGGTGVIVSGCEACRKRFGTNSQYLRHLSEDVLPNIL
Ga0210405_111842271	3300021171	Soil	ILLEAKAELERHVWGTFVEGKASVALGGTGVIVSGCEACRKRFGTNSQYLRHLSDDVLPSILQRAFEIAGVSTSK
Ga0210408_101778162	3300021178	Soil	MDKAKILAEAKAELERHVWGTYVEGKATVALGGTGVVVSGCEACRKRFGTNSQYLRHLSDDVLPNILQRAFEITGVSTSK
Ga0210396_101488962	3300021180	Soil	MDKHKILAEAKAELERHVWGTFVEGKASVALGGSGVVVSGCEACRKRFGTNSQYLRHLADDVLPVILLKAFEIAGVSTATQ
Ga0210396_103146912	3300021180	Soil	MDKAKILAEAKAELERHVWGTYVEGKATVALGGTGVVVSGCEACRKRFGTNSQYLRHLSEDVLPNILRKAFEIAGVLTSK
Ga0210396_105707041	3300021180	Soil	CGNGQAQDPSGAELERHVWGTFVEGKATVALGGTGVVVSGCEACRKRFGTNSQYLRHLSEDVLPSILQRAFEIAGVSTSK
Ga0210388_114578612	3300021181	Soil	MDKHKIPAEAKAELERHVWGTFVEGKASVALGGSGVVVSGCEACRKRFGTNSQYLRHLADDVLPGIIVGAISAALTA
Ga0210393_101076802	3300021401	Soil	VLTGRCYSVEMDKHKILADAKAELERHVWGTFVEGKASVALGGTGVVVSGCEACRKRLGTNSQYLRHLADDVLPRIFEEVLSKARS
Ga0210397_100025577	3300021403	Soil	MDKHKILVDAKAELERHVWGTFVEGKASVAVGGTGVVVSGCEACRKRFGTNSQYLRHRADDVLPAILRKAFEIAGVSISK
Ga0210397_101780392	3300021403	Soil	MDKHKILVEAKAELERHVWGTFVEGKATVALGGTGVVVSGCEACRKRFGTNSQYLRHLADDVLPLILGKAFEVAGKSV
Ga0210389_100306414	3300021404	Soil	MNREKILQQAKDELERHVWGTFVEGKASVALGGTGVVVSGCEACRRRFGTNSQYLRHLTDDVLPGIIEDALSTARS
Ga0210389_107964331	3300021404	Soil	MDKHKILAEAKAELERHVWGTFVEGKASVALGGSGVVVSGCEACRKRFGTNSQYLRHLADDVLPGINVGAISAARS
Ga0210386_100366121	3300021406	Soil	VLTGRCYSVEMDKHKILADAKAELERHVWGTFVDGKASVANSGTGVVVSGCEACRKRFGTNSQYLRHLAEDVLPEILENTFKQS
Ga0210386_102379861	3300021406	Soil	MNREKILQQAKDELERHVWGTFVEGKASVALGGTGVVVSGCEACRRRFGTNSQYLRHLTDDVLPGIIEDALSAARS
Ga0210386_112560581	3300021406	Soil	RETSIMDKAKILAEAKAELERLVWGTFVEGKASVALGGTGVVVSGCEACRKRFGTNSQYLRHLADDVLPAIIQDAFSAARS
Ga0210383_101937192	3300021407	Soil	MLECYSVEMDKHKILVDAKAELERHVWGTFVEGKATVALGGTGVVVSGCEACRKRFGTNSQYLRHLSDDVLPNILRKAFEIAGVSTSK
Ga0210383_105823623	3300021407	Soil	MDREKIIQEAKAELERHIWGTFVEGKATVALGGTGVVVSGCEACRKRFGTNSQYLRHLADEVLPRN
Ga0210384_104794781	3300021432	Soil	VLTGRCYSVEMDKHKILADAKAELERHVWGTFVEGKASVALGGTGVVVSGCEACRKRFGTNSQYLRHLSDDVLPNILQRAFEITGVSTSK
Ga0210384_110440652	3300021432	Soil	MDKAKILAEAKAELERHVWGTFVEGKATVALGGSSVVVSGCEACRKRFGTNSQYLRHLSDDVLPSILQRAFEIAGVSTLK
Ga0210390_104552773	3300021474	Soil	MLLCGNGQAQDPSGAELERHVWGTFVEGKATVALGGTGVVVSGCEACRKRFGTNSQYLRHLSEDVLPSILQRAFEIAGVSTSK
Ga0210390_111516322	3300021474	Soil	MLLCRNGQAQDPSGREGRTRKARLGHVRRGASVALGGTGVVVSGCEACRKRFGTNSQYLRHLSDDVLPNILQKGFPDCRRFDFEIIVER
Ga0210392_101832742	3300021475	Soil	MDKHKILADAKAELERHVWGTFVEGKASVALGGTGVVVSGCEACRKRLGTNSQYLRHLADDVLPRIFEEVLSKARS
Ga0210392_105078882	3300021475	Soil	VLTGKCYSVEMDKHKMLADAKAELERHVWGTFVDGKASVANSGTGVVVSGCEACRKRFGTNSQYLRHLAEDVLPEILENTF
Ga0210398_104287653	3300021477	Soil	MDKAKILAEAKAELERHVWGTYVEGKATVALGGTGVVVSGCEACRKRFGTNSQYLRHLSDDVLPNILRKAFEIAGVPTSK
Ga0210398_107214861	3300021477	Soil	MLECYSVEMDKHKILVDAKAELERHVWGTFVEGKATVALGGTGVVVSGCEACRKRFGTNSHYLRHLSEDVLPSILQRALEIAGVSTLK
Ga0210402_104077421	3300021478	Soil	MDRKRIIQEAKAELERHVWGTFVEGKASVALGGTGLVVSGCEACCKRFGTNSQYLRHLADDVLPRIIEGAFSAAKE
Ga0210402_108379102	3300021478	Soil	MDEAKILREAKAELERHVWGTFVEGKATVALGGTGVVVSGCEACCKRFGTNSQYLRHLADDVLPLIVRKAFEIAGVSISK
Ga0210402_110896902	3300021478	Soil	MLECYSVEMDKHKILADAKAELERHIWGTFVEGKASVALGGTGVVVSGCEACRKKFGTNSQYLRHLADDVLPGIIEGILS
Ga0210409_100453275	3300021559	Soil	MLECYSVEMDKHKILVDAKAELERHVWGTFVEGKATVALGGTGVVVSGCEACRKRFGTNSQYLRHLSEDVLPSILQRAYEIAGVSTSK
Ga0210409_113001052	3300021559	Soil	AELERHIWGTFVEGKATVALGGTGVVVSGCEACRKRFGTNSQYLRHLSDDVLPSILQRAFEIAGVSTSK
Ga0210409_116198172	3300021559	Soil	MSYPMNREMILREAKAELERHVWGTFVEGKSSVALGGTGVVVSGCEACRKRFGTNSQYLRHLADDVLPDII
Ga0210409_116274791	3300021559	Soil	MNREKILQQAKDELERHVWGTFVEGKASVVLGGTGVVVSGCEACRRRFGTNSQYLRHLTDDVLPGIIEDALSAARS
Ga0126371_105281853	3300021560	Tropical Forest Soil	MDKHKILAAAKTEIQRHVWGTFVDGDGISIAQGGKGVVVSGCEACRKQLQSNAQYLRHLADDVMPMILRQAFKIANETSS
Ga0208603_10304582	3300027109	Forest Soil	MDKHKILADAKAELERHVWGTFVEGKASVALGGTGVVVSGCEACRKRFGTNSQYLRHLADGVLPGIIQEVLSAARS
Ga0209525_100003627	3300027575	Forest Soil	VEMEKHKILVDAKAELEKHVWGTFVEGKATVALGGSGVVVSNCEACRKRFGTNSQYLRHLSDDVLPLILRKAFEIAGVSTAK
Ga0209003_10698562	3300027576	Forest Soil	MLECYSVEMDKHKILADAKAELERHVWGTFVEGKASVALGGTGVVVSGCEACRKRFGTNSQYLRHLADDVLPKIIESAVNFCD
Ga0209329_10021261	3300027605	Forest Soil	MDKAKILAAAKSELQKHVWDTFVDNPPSVAQGGSGVVVVGCTACRKRLNTNSQYLRHLSDDVLPIILRKAFGGA
Ga0209167_100038464	3300027867	Surface Soil	VLTGRCYSVEIDKHKILVDAKAELERHVWGTFVEGKTTVALGGRGVVVSCRKRFGANSQYLRHLSDDVLPNILQRAFEIAGVSTSK
Ga0209579_100094305	3300027869	Surface Soil	MDKARILQEAKAELERHIWGTFVEGKATVALGGAGVVVSGGEACRKRFGTNSQYLRHLSDHVLPVILRKAFEIAGVSTSK
Ga0209579_101701952	3300027869	Surface Soil	MDKHKILVEAKAELERHVWGTFVEGKATVALGGTGVVVSGCEACRKRFGTNSQYLRHLSDDVLPNILRKAFEIGQSAP
Ga0209624_105963592	3300027895	Forest Soil	MDKVKIPQEAKAELERHVWGTFVEGKATVALGGTGVVVSGCEACRKRFGTNSQYLRHLSDDVLPSILQRAFEVAGVSTLK
Ga0209006_100953444	3300027908	Forest Soil	MDKHKILGDAKAELEGTFWGTFVEGKASVALGGTGVVVSGCEACRKRLGTNSQYLRHLADDVLPVILRKAFELAGIPVLKIIG
Ga0209006_105647941	3300027908	Forest Soil	MDKHKILVDAKAELERHVWGTFVEGKASVALGGTGIVVSGCEACRKRFGTNSQYLRHLSDDVLPNILHTAFEIAGVRSAE
Ga0308309_116500711	3300028906	Soil	VLTGRCYSVQMDKHKILADAKAELESHVWGTFVEGKTSVALGGTGVVVSGCEACRKRFGTNSQYLRHLADDVLPIILRKAFDIAGVPMENK
Ga0170834_1006081411	3300031057	Forest Soil	SIDEEVRYRCPMNREKIIQEAKDELERHIWGTFVEGKASVALGGTGVVVSGCEACRKRFGTNSQYLRHLADDVLPGILENAFKQS
Ga0170834_1036085741	3300031057	Forest Soil	VLTGRCYSVEMDKHKMLAEAKAELERHVWGTFVEGKASVALGGTGVVVSGCEAFRKRFGTNSQYLRHLADDVLPEIIER
Ga0170834_1087249832	3300031057	Forest Soil	ELERHVWGTFVEEKASVALGVACRKRFGTNSQYLRHLADDVLPGIIESAFSAGRKG
Ga0170823_127320254	3300031128	Forest Soil	MILREAKAELEGHVWDTFVEGNASVSLGGTGVCGCQACRKRFGTNSQYLRHLADDVLPGIIESTFCAGRKG
Ga0170824_1020504793	3300031231	Forest Soil	VLTGKCYSVEMDKHKMLADAKAELERHVWGTFVDGKASVANSGTGVVVSGCEACRKRFGTNSQYLRHLAEDVLPEILEN
Ga0170824_1035866131	3300031231	Forest Soil	MNREKIIQEAKDELERHIWGTFVEGKASVALGGTGVVVSGCEACRKRFGTNSQYLRHLADDVLPGILENAFKQS
Ga0170824_1114650902	3300031231	Forest Soil	MDREKILQEAKAELERHVWGTFVEGNMSVALGGTGVVVSGCLACRKRFGTNGQYLRHLAEDVLPGLIEGALSASRHF
Ga0170824_1174378812	3300031231	Forest Soil	MSCPINQEMILREAKAELEGHVWDTFVEGNASVSLGGTGVCGCQACRKRFGTNSQYLRHLADDVLPGIIESAFSAGRKG
Ga0170824_1192762512	3300031231	Forest Soil	MDKHKILAEAKAELERHVWGTFVEGKASVALGGTGVVVSGCEACRKRFGTNSQYLRHLSDDVLPNILLKAFEIAVVSISK
Ga0307476_107673201	3300031715	Hardwood Forest Soil	MDKHKILADAKAELERHVWGTFVEGKASIALGGTGIVVSGCEACRKRFGTNSQYLRHLADDVLPGIIEAVLSIGCS
Ga0307474_102011042	3300031718	Hardwood Forest Soil	MDKHKILADAKAELERHVWGTFVEGKASIALGGTGIVVSGCEACRKRFGTNSQYLRHLADDVLPQIIESAVNFRD
Ga0307474_110827851	3300031718	Hardwood Forest Soil	MDREKILQEAKAELERHVWGTFVEGNMSVALGGTGVVVSGCEACRKRFGTNSQYLRHLADDVLPGILESALQLDSSFT
Ga0307469_105282662	3300031720	Hardwood Forest Soil	VLTSRCYPVEMDKHKILVDAKAELERHVWGTFVEGKATVALGGTGVVVSGCEACRKRFGTNSQYPRRLAEDVLPGILRMPFKQS
Ga0307469_106772722	3300031720	Hardwood Forest Soil	MLECYSVEMDKHKILADAKAEIERHVWGTFVEGNASVALGGTGVVVSGCEACRKRFGTNSQYLRHLADDVLPDIIDRAVSAGRS
Ga0307469_109821071	3300031720	Hardwood Forest Soil	VLTGRCYSVEMDKHKILLDAKAELERHVWGTFVEGKASVALGGTGVVVSGCEACRKRFGTNSQYLRHLADDVLPQIIESAVNFRD
Ga0307477_100334362	3300031753	Hardwood Forest Soil	MDKDKILAEAKSELERHVWGTFVEGKATVALGGTGVVVSGCEACRKRFGTNSQYLRHLADDVLPGIIQEVFSAGIP
Ga0307477_105162422	3300031753	Hardwood Forest Soil	MDKHKILAAAKAELQRHLWDTFVDYPPAVAEGGKGVVIPGCTACKKRINTNSQYLRHLADDVLPVILRKAFEIAGVSTSE
Ga0307475_100224074	3300031754	Hardwood Forest Soil	MDREKILQEAKAELERHVWGTFVEGNMSVALAGTGVVVSGCEACRKRFGTNSQYLRHLADDVLPGILESALSKASASC
Ga0307473_101992392	3300031820	Hardwood Forest Soil	MDKEKTFQAAKAKLERHIWGTFVDGDLSVALGGSGVVVAGCDACRKRINTNSQGLRHLADDVLPGILQRAFSRASARD
Ga0307478_100546107	3300031823	Hardwood Forest Soil	AKAELERHVWGTFVEGKASIALGGTGIVVSGCEACRKRFGTNSQYLRHLADDVLPQIIESAVNFRD
Ga0307478_104307513	3300031823	Hardwood Forest Soil	LMDAKAELERHIWGTFVEGKATVALGGTGVVVSGCEACRKRFGTNSQYLRHLSDDVLPNILQRAFQIAGVSTSK
Ga0307479_105823822	3300031962	Hardwood Forest Soil	MDREKILQGAKAELERHVWGTFVEGNMSVAPGGTGVVVSGCEACRKRFGTKSQYLRHLADDVLPGILESALQLDSSFTSHLD
Ga0307479_108406172	3300031962	Hardwood Forest Soil	MDKHKILADAKAELERHVWGTFVEGKATVALGGTGVVVSGCEACRKRFGTNSQYLRHLSDDVLPNILQRAFEITGVSTSK
Ga0307479_109560031	3300031962	Hardwood Forest Soil	MDREKILQEAKAELERHVWGTFVEGNMSVALGGTGVVVSGCEACRKRFGTNSQYLRHLADDVQPGN
Ga0307471_1003851823	3300032180	Hardwood Forest Soil	VLTSRCYSVEMDKHKILADAKAELERHVWGTFVDGKATVALGGTGVVVSGCEACRKRLGTNSQYLRHLSDDVVPLILRKAFEIAGVTEKS
Ga0307471_1014150501	3300032180	Hardwood Forest Soil	MDREKILQEAKTELERHVWGTFIEGNMSVALGGTGVVVSGCEACRKRLGTNSQYLRHLADDVLPGILE
Ga0307472_1003916692	3300032205	Hardwood Forest Soil	MLECYSVEMDKHKILADAKAEIERHVWGTFVEGNASVALGGTGVVVSGCEACRKRFGTNSQYLRHLADDVLPGIIERVFSV
Ga0307472_1005238741	3300032205	Hardwood Forest Soil	VLTGRCYSFEMDKHKILADAKAELEGHVWGTFVEGKSSVALGGTGVVVSGCEACRKRFGTNSHYLRHLADDVLPVILRQAFAIANE
Ga0307472_1010616083	3300032205	Hardwood Forest Soil	VLTSRCYSVEMDKHKILADAKAELERHVWGTFVDGKATVALGGTGVVVSGCEACRKRLGTNSQYLRHLSDD
Ga0335085_100610484	3300032770	Soil	MDKDKILVEAKAELERHVWGTFVEGKATVALGGTSVVVSGCEACRKRFGTNSQYLRHLSDDVLPNILWKAFEIAGKSV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F084928

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences