Metagenome / Metatranscriptome Family F085010

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085010
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	63 residues
Representative Sequence	VTGTTVSLTLSEEERELIQEILEERHRTLLVEISHTDHHHFKTVLRKKAELLESVLSRFLVTA
Number of Associated Samples	55
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	74.77 %
% of genes near scaffold ends (potentially truncated)	22.52 %
% of genes from short scaffolds (< 2000 bps)	64.86 %
Associated GOLD sequencing projects	48
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (76.577 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland (28.829 % of family members)
Environment Ontology (ENVO)	Unclassified (45.946 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.964 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.75% β-sheet: 0.00% Coil/Unstructured: 47.25%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.25.1.1: Ferritin	d2fjca1	2fjc	0.83863
a.47.2.1: t-snare proteins	d1fioa_	1fio	0.83862
e.41.1.1: Adenylylcyclase toxin (the edema factor)	d1k8ta_	1k8t	0.83014
a.25.1.4: YciF-like	d2gyqa1	2gyq	0.82818
a.25.1.0: automated matches	d3kwoa1	3kwo	0.82503

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF01380	SIS	32.73
PF03706	LPG_synthase_TM	22.73
PF00083	Sugar_tr	7.27
PF07238	PilZ	3.64
PF02669	KdpC	1.82
PF02738	MoCoBD_1	1.82
PF00118	Cpn60_TCP1	0.91
PF01011	PQQ	0.91
PF00486	Trans_reg_C	0.91
PF13620	CarboxypepD_reg	0.91
PF01292	Ni_hydr_CYTB	0.91
PF00583	Acetyltransf_1	0.91
PF01475	FUR	0.91
PF10518	TAT_signal	0.91
PF03705	CheR_N	0.91
PF07859	Abhydrolase_3	0.91
PF08282	Hydrolase_3	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	22.73
COG1352	Methylase of chemotaxis methyl-accepting proteins	Signal transduction mechanisms [T]	1.82
COG2156	K+-transporting ATPase, KdpC subunit	Inorganic ion transport and metabolism [P]	1.82
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.91
COG0560	Phosphoserine phosphatase	Amino acid transport and metabolism [E]	0.91
COG0561	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	Coenzyme transport and metabolism [H]	0.91
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.91
COG0735	Fe2+ or Zn2+ uptake regulation protein Fur/Zur	Inorganic ion transport and metabolism [P]	0.91
COG1877	Trehalose-6-phosphate phosphatase	Carbohydrate transport and metabolism [G]	0.91
COG1969	Ni,Fe-hydrogenase I cytochrome b subunit	Energy production and conversion [C]	0.91
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	0.91
COG2864	Cytochrome b subunit of formate dehydrogenase	Energy production and conversion [C]	0.91
COG3038	Cytochrome b561	Energy production and conversion [C]	0.91
COG3658	Cytochrome b subunit of Ni2+-dependent hydrogenase	Energy production and conversion [C]	0.91
COG3769	Mannosyl-3-phosphoglycerate phosphatase YedP/MpgP, HAD superfamily	Carbohydrate transport and metabolism [G]	0.91
COG4117	Thiosulfate reductase cytochrome b subunit	Inorganic ion transport and metabolism [P]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.58 %
Unclassified	root	N/A	23.42 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.58 %
Unclassified	root	N/A	23.42 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.58 %
Unclassified	root	N/A	23.42 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	59.46 %
Unclassified	root	N/A	23.42 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	34.23 %
Unclassified	root	N/A	23.42 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	20.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	34.23 %
Unclassified	root	N/A	23.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	34.23 %
Unclassified	root	N/A	23.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.72 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	8.11 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.80 %
Terriglobus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.72 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	8.11 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.80 %
Terriglobus roseus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus roseus	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10034093	All Organisms → cellular organisms → Bacteria	2935	Open in IMG/M
3300000567\|JGI12270J11330_10115248	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1114	Open in IMG/M
3300004473\|Ga0068919_1364550	All Organisms → cellular organisms → Bacteria → Acidobacteria	601	Open in IMG/M
3300004478\|Ga0068972_1308193	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300005176\|Ga0066679_10283958	All Organisms → cellular organisms → Bacteria	1073	Open in IMG/M
3300005435\|Ga0070714_100003455	All Organisms → cellular organisms → Bacteria	11778	Open in IMG/M
3300005537\|Ga0070730_10646519	Not Available	672	Open in IMG/M
3300005542\|Ga0070732_10005070	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7140	Open in IMG/M
3300006052\|Ga0075029_100004462	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7755	Open in IMG/M
3300006052\|Ga0075029_100305077	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1017	Open in IMG/M
3300006052\|Ga0075029_100442274	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300006059\|Ga0075017_100000693	All Organisms → cellular organisms → Bacteria	19316	Open in IMG/M
3300006059\|Ga0075017_100437357	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300006059\|Ga0075017_100477886	Not Available	943	Open in IMG/M
3300006086\|Ga0075019_10031912	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2957	Open in IMG/M
3300006102\|Ga0075015_100295254	Not Available	890	Open in IMG/M
3300006102\|Ga0075015_100835036	Not Available	555	Open in IMG/M
3300006162\|Ga0075030_100000718	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	29205	Open in IMG/M
3300006162\|Ga0075030_100067581	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2950	Open in IMG/M
3300006162\|Ga0075030_100343874	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300006162\|Ga0075030_100440459	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1038	Open in IMG/M
3300009525\|Ga0116220_10354327	Not Available	651	Open in IMG/M
3300010358\|Ga0126370_10772158	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	853	Open in IMG/M
3300010358\|Ga0126370_11532970	Not Available	635	Open in IMG/M
3300010360\|Ga0126372_12576194	Not Available	560	Open in IMG/M
3300010379\|Ga0136449_100398625	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus roseus	2444	Open in IMG/M
3300010379\|Ga0136449_100469271	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2200	Open in IMG/M
3300010379\|Ga0136449_100763982	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1606	Open in IMG/M
3300010379\|Ga0136449_101863216	Not Available	896	Open in IMG/M
3300010379\|Ga0136449_103790021	Not Available	569	Open in IMG/M
3300017822\|Ga0187802_10351629	Not Available	579	Open in IMG/M
3300017823\|Ga0187818_10056620	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1686	Open in IMG/M
3300017924\|Ga0187820_1000274	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	11281	Open in IMG/M
3300017927\|Ga0187824_10186504	Not Available	701	Open in IMG/M
3300017932\|Ga0187814_10293802	Not Available	621	Open in IMG/M
3300017934\|Ga0187803_10002736	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6931	Open in IMG/M
3300017934\|Ga0187803_10010616	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3681	Open in IMG/M
3300017943\|Ga0187819_10137444	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1457	Open in IMG/M
3300017959\|Ga0187779_10057908	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2271	Open in IMG/M
3300017959\|Ga0187779_10057908	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2271	Open in IMG/M
3300017961\|Ga0187778_10022175	All Organisms → cellular organisms → Bacteria → Acidobacteria	3889	Open in IMG/M
3300017961\|Ga0187778_10231871	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1182	Open in IMG/M
3300017972\|Ga0187781_10040236	All Organisms → cellular organisms → Bacteria	3221	Open in IMG/M
3300017972\|Ga0187781_10112324	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1897	Open in IMG/M
3300017972\|Ga0187781_10169649	All Organisms → cellular organisms → Bacteria	1536	Open in IMG/M
3300017973\|Ga0187780_10117735	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1835	Open in IMG/M
3300017973\|Ga0187780_10271723	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1190	Open in IMG/M
3300017974\|Ga0187777_10178082	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1427	Open in IMG/M
3300017975\|Ga0187782_10648376	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300017999\|Ga0187767_10267867	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300018007\|Ga0187805_10022421	All Organisms → cellular organisms → Bacteria	2762	Open in IMG/M
3300018085\|Ga0187772_10001666	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10689	Open in IMG/M
3300018085\|Ga0187772_10091807	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1943	Open in IMG/M
3300018085\|Ga0187772_10216751	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1290	Open in IMG/M
3300018085\|Ga0187772_10562469	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	809	Open in IMG/M
3300018086\|Ga0187769_10000097	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	44770	Open in IMG/M
3300018086\|Ga0187769_10024342	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4052	Open in IMG/M
3300018086\|Ga0187769_10271530	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1264	Open in IMG/M
3300018086\|Ga0187769_10642699	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300018086\|Ga0187769_11371089	Not Available	535	Open in IMG/M
3300018086\|Ga0187769_11448577	Not Available	519	Open in IMG/M
3300018088\|Ga0187771_10000101	All Organisms → cellular organisms → Bacteria	41002	Open in IMG/M
3300018088\|Ga0187771_10023744	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4603	Open in IMG/M
3300018088\|Ga0187771_10317095	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1308	Open in IMG/M
3300018088\|Ga0187771_10826232	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	786	Open in IMG/M
3300018088\|Ga0187771_11144569	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	660	Open in IMG/M
3300018090\|Ga0187770_10162299	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1708	Open in IMG/M
3300018090\|Ga0187770_10339278	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1173	Open in IMG/M
3300018090\|Ga0187770_10645966	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	843	Open in IMG/M
3300018090\|Ga0187770_10695898	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	811	Open in IMG/M
3300018090\|Ga0187770_10926315	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300018431\|Ga0066655_10643944	Not Available	716	Open in IMG/M
3300019241\|Ga0187793_1014321	Not Available	656	Open in IMG/M
3300019251\|Ga0187795_1195668	Not Available	606	Open in IMG/M
3300019275\|Ga0187798_1031339	Not Available	515	Open in IMG/M
3300019278\|Ga0187800_1179686	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	719	Open in IMG/M
3300019278\|Ga0187800_1509431	Not Available	609	Open in IMG/M
3300019278\|Ga0187800_1886624	Not Available	520	Open in IMG/M
3300019284\|Ga0187797_1008654	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	707	Open in IMG/M
3300019284\|Ga0187797_1050565	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	722	Open in IMG/M
3300019284\|Ga0187797_1466973	All Organisms → cellular organisms → Bacteria → Acidobacteria	896	Open in IMG/M
3300019284\|Ga0187797_1577023	All Organisms → cellular organisms → Bacteria → Acidobacteria	744	Open in IMG/M
3300021861\|Ga0213853_11564098	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300026318\|Ga0209471_1196572	All Organisms → cellular organisms → Bacteria → Acidobacteria	772	Open in IMG/M
3300027371\|Ga0209418_1078606	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300027570\|Ga0208043_1000050	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	87395	Open in IMG/M
3300027842\|Ga0209580_10002970	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7283	Open in IMG/M
3300027854\|Ga0209517_10000418	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	73381	Open in IMG/M
3300027857\|Ga0209166_10654673	Not Available	531	Open in IMG/M
3300027857\|Ga0209166_10693161	Not Available	513	Open in IMG/M
3300027898\|Ga0209067_10010901	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4794	Open in IMG/M
3300027898\|Ga0209067_10026311	Not Available	2975	Open in IMG/M
3300027911\|Ga0209698_10001269	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	29273	Open in IMG/M
3300027911\|Ga0209698_10039982	All Organisms → cellular organisms → Bacteria	4207	Open in IMG/M
3300027911\|Ga0209698_10047436	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3789	Open in IMG/M
3300027911\|Ga0209698_10053317	All Organisms → cellular organisms → Bacteria	3531	Open in IMG/M
3300027911\|Ga0209698_10180141	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1718	Open in IMG/M
3300027911\|Ga0209698_10237497	Not Available	1460	Open in IMG/M
3300027911\|Ga0209698_11087561	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300032160\|Ga0311301_10206856	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3347	Open in IMG/M
3300032160\|Ga0311301_10330952	All Organisms → cellular organisms → Bacteria	2405	Open in IMG/M
3300032160\|Ga0311301_10386800	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2154	Open in IMG/M
3300032160\|Ga0311301_10435707	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1984	Open in IMG/M
3300032160\|Ga0311301_11059554	Not Available	1062	Open in IMG/M
3300032805\|Ga0335078_10002849	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	26015	Open in IMG/M
3300032805\|Ga0335078_10038813	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7064	Open in IMG/M
3300032805\|Ga0335078_11164448	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	894	Open in IMG/M
3300032829\|Ga0335070_10368313	Not Available	1380	Open in IMG/M
3300033158\|Ga0335077_10611223	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1136	Open in IMG/M
3300033977\|Ga0314861_0000109	All Organisms → cellular organisms → Bacteria	134904	Open in IMG/M
3300033977\|Ga0314861_0035238	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2930	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.17%
Aquatic	Environmental → Aquatic	28.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.17%
Sediment	Environmental → Aquatic → Sediment	19.82%
Freshwater	Environmental → Aquatic → Freshwater	9.01%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	44.14%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	25.23%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	19.82%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.11%
Loam	Environmental → Terrestrial → Soil → Loam	1.80%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	44.14%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	19.82%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	8.11%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.70%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.90%

Habitat	Taxonomy	Distribution
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	28.83%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	19.82%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	15.32%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	10.81%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	8.11%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.50%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.80%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300004473	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004478	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 69 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300019241	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019251	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019275	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019278	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019284	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100340932	3300000567	Peatlands Soil	MTGTVTSFTLSDEERDLVQEVLEERHRILLIEISHTDHLHFRTVLRKKAELLESVLNRFVATAA*
JGI12270J11330_101152482	3300000567	Peatlands Soil	MTGSAVSLTLSEEERELVQEILEERHRTLLVEVSHTDHHHFKAVLRKKAELLESVLSRFMVHA*
Ga0068919_13645501	3300004473	Peatlands Soil	VTGTMVSLTLSEEEREVIQEILEEQHRTLLLEISYTDHHHFKTLLRKKAEVLESVLSRFLVNA*
Ga0068972_13081932	3300004478	Peatlands Soil	MTGTVTSFTLSDEERDLVQEILEERHRILLIEISHTDHLHFRTVLRKKAELLESVLNRFVATAA*
Ga0066679_102839582	3300005176	Soil	MNATTCELVLNEEERDLILDILEERHRTLLVEISHTDHHHFKLVLRKKAEMLESVLSRLIAQTQETTGMSAAS*
Ga0070714_10000345510	3300005435	Agricultural Soil	MTGTMVSLALNDEERDLIQELLEERHRSLLIEIAHTDHYHFKVVLRKKAELVELVLNRFLVHA*
Ga0070730_106465192	3300005537	Surface Soil	MTGTVVSLALNDEERVLIQELLEDRYRTLLLEIAHTDHHHFKVVLRKKADLVESLMSRFLVHA*
Ga0070732_100050703	3300005542	Surface Soil	MTGTVVALTLNDEERDLVQEILEERHRTLLLEIAHTDHLHFKQVLRKKAGLLESVLTRFMQPV*
Ga0075029_1000044626	3300006052	Watersheds	VTGTTVSLTLSEEERELIQEILEERHRTLLVEISHTDHHHFKTVLRKKAELLESVLSRFLVTA*
Ga0075029_1003050771	3300006052	Watersheds	MTEASVSLTLSNDERDLIQEILEERHRTLLIEISHTDHYHFKVVLRKKAALLESMLNRFIVHA*
Ga0075029_1004422741	3300006052	Watersheds	MTGTAVCLTLSDEERELIQQVLEERHRTMLIEIAHTDHHHFKVVLKKKAELLEAVLNRFMAHA*
Ga0075017_10000069319	3300006059	Watersheds	MTGTVVSLTLSEDERELVQEIIEERHRTLLLEISQTDHHHFKGVLRKKAELLESVMSRFLVNA*
Ga0075017_1004373572	3300006059	Watersheds	MTGTAVCLTLSEEERELIQQVLEERHRTMLIEIAHTDHHHFKVVLKKKAELLEAVLNRFMAHA*
Ga0075017_1004778862	3300006059	Watersheds	VTGTMVSLTLSEEEQDLIQEILEEQHRTLLLEIAHTDHHHFKTVLQKKAEVLESVLSRFLVNA*
Ga0075019_100319124	3300006086	Watersheds	MSAAEMEVLVTGTTVSLTLSEEERELIQEILEERHRTLLVEISHTDHHHFKTVLRKKAELLESVLSRFLVTA*
Ga0075015_1002952542	3300006102	Watersheds	MVSLTLSEEEQDLIQEILEEQHRTLLLEIAHTDHHHFKTVLQKKAEVLESVLSRFLVNA*
Ga0075015_1008350362	3300006102	Watersheds	DMTGTVVSLTLSEDERELVQEIIEERHRTLLLEISQTDHHHFKGVLRKKAELLESVMSRFLVNA*
Ga0075030_10000071826	3300006162	Watersheds	VTGTTVSLTLSDEERELIQEILEERHRTLLVEISHTDHHHFKMVLRRKAELLELVLSRFLVNA*
Ga0075030_1000675813	3300006162	Watersheds	VEVLVTGTMVSLTLSEEEQDLIQEILEEQHRTLLLEIAHTDHHHFKTVLQKKAEVLESVLSRFLVNA*
Ga0075030_1003438742	3300006162	Watersheds	VTGTMVSLTLSEEERELIQKILEEQHRTLLVEISQTDHHHFKTVLRKEAEALESVLGRFLVNA*
Ga0075030_1004404592	3300006162	Watersheds	VTGTMVSLTLREEEQELIQEILEEQHRTLLLEIAHTDHHHFKTVLQKKAEVLESVLSRFLVNA*
Ga0116220_103543272	3300009525	Peatlands Soil	MLTLKKLEVLVTGTMVSLTLSEEEREVIQEILEEQHRTLLLEISYTDHHHFKTLLRKKAEVLESVLSRFLVNA*
Ga0126370_107721582	3300010358	Tropical Forest Soil	MTEEEKSLLEEILEERHRTLMMEISHTDHHHFKIVLRKKAELLESLLTRFAAHAA*
Ga0126370_115329701	3300010358	Tropical Forest Soil	LTEDEKSLLEEILEEQHRSLMMEISQTDHYHFKIILRRKAELLESLLSRFAAHAA*
Ga0126372_125761941	3300010360	Tropical Forest Soil	MTEEEKSLLEEILEERHRTLMMEISHTDHHHFKFVLRKKAELLESLLTRFAAHAA*
Ga0136449_1003986252	3300010379	Peatlands Soil	MTGAVTSLTLSDEERDLVQEILEERHRILLLEISHTDHLHFKTVLRKKADLLESVLNRFLAAVA*
Ga0136449_1004692712	3300010379	Peatlands Soil	MNATTCELVLNEEERELILDILEERHRTLLVEISHTDHHHFKLVLRKKAEMLESVLSRLIAQTQETTGLSAVS*
Ga0136449_1007639822	3300010379	Peatlands Soil	MLSEEERDLIQEILEERHRTLLVEISQTDHHHFKAVLRKKAELLESVLSRFMVHA*
Ga0136449_1018632162	3300010379	Peatlands Soil	TLSDEERDLVQEILEERHRILLIEISHTDHLHFRTVLRKKAELLESVLNRFVATAA*
Ga0136449_1037900211	3300010379	Peatlands Soil	REENGVRKWEVAMTGNVTSLTLSDEERDLIQEILEERHRTLLIEISHTDHLHFKTVLRRKAELLESVLSRFLAAA*
Ga0187802_103516291	3300017822	Freshwater Sediment	VLVTGTTVSLALSAEERELIREILEERHRTLLVEISHTDHHHFKTVLRKKAELLESVLSRFLVNA
Ga0187818_100566201	3300017823	Freshwater Sediment	MWAAEGVEVLVTETTVSLALSEEERELIQEILEERHRTLLVEISHTDHHHFKTVLRKKAEILESVLSRFLVNA
Ga0187820_100027410	3300017924	Freshwater Sediment	MTGTITSLTLTEEERDLMQEILEERHRTLLLEISHTDHHHFKVVLRKKAEMLESLLNRFLAAA
Ga0187824_101865042	3300017927	Freshwater Sediment	MTGTLISVTLNEEEREILQEVLEEQHRTLLLEIGNTDHQHFRSVLKKKAAVLEGVLNRMMMPA
Ga0187814_102938021	3300017932	Freshwater Sediment	MSEASLSLTLSDEERDIIQEILEERHRTLLVEISHTDHQHFKIVLRKKAALLESVLSRFAVHA
Ga0187803_100027368	3300017934	Freshwater Sediment	MNATTCDLVLNEEERELILDILEERHRTLLVEISHTDHHHFKLVLRKKAEMLESVLSRLIVPA
Ga0187803_100106162	3300017934	Freshwater Sediment	MTGTEVALRFNEEERELIQEILEERHRTLLMEISHTDHHHFKVVLRKKAELLESVLSRFMVHA
Ga0187819_101374441	3300017943	Freshwater Sediment	VTETTVSLALSEEERELIQEILEQRHRTLLVEISHTDHHHFKTVLRKKAELLESVL
Ga0187779_100579082	3300017959	Tropical Peatland	VTGVSLTLSDEERELLSEILEGRQRTLLREISRADHHEFKVALQKKAEMLESLLRRFMVH
Ga0187779_100579083	3300017959	Tropical Peatland	MTGTGTSLTLSEEERDLVQEILEERHRTLLVEISHTDHLHFKTVLRKKAEMLESVLNRFMAAAA
Ga0187778_100221752	3300017961	Tropical Peatland	VGNVVSLTLDEEERELIEEILEERQRTMLVEISHTDHYEFKVELRKKAELLESVVSRLAVHA
Ga0187778_102318712	3300017961	Tropical Peatland	MTGKGTSLALSEEERDLVQEILEERHRTLLVEISHTDHLHFKTVLRKKAEMLESVLNRFMAAAA
Ga0187781_100402365	3300017972	Tropical Peatland	MIDELSLTLSEKERELLEEILEERHRTLLMEIANTEHHDFKVVLRKKAQLLESILERIAVAV
Ga0187781_101123241	3300017972	Tropical Peatland	MTATEVSLTLNEEERELVQEVLEERHRTLLLEIAHTDHQHFKMVLRKQANLLESILSRFAVSA
Ga0187781_101696492	3300017972	Tropical Peatland	MIDAALSLALSEKERELLEEILEERHRTLLMEIAHTEHHDFKVVLRKKAELLESILERITVAV
Ga0187780_101177352	3300017973	Tropical Peatland	VTGVSLTLSDEERELLSEILEGRQRTLLREISRADHHEFKVALQKKAELLESLLRRFMIH
Ga0187780_102717232	3300017973	Tropical Peatland	MTGTAVSLTLNEEERELVQEILEERHRTLLMEISHTDHHHFKVVLRKKAELLENVLSRFMVHA
Ga0187777_101780821	3300017974	Tropical Peatland	VTGVSLTLSDEERELLSEILEGRQRTLLREISRADHHEFKVALQKKAELLESLLRRFMVH
Ga0187782_106483762	3300017975	Tropical Peatland	MPGKVTMTATEVTLTLSDEEKDLIQEILEERHRSLLMEISHTDHHHFRVVLQKKARLLESLLTRLAVPA
Ga0187767_102678671	3300017999	Tropical Peatland	MTLTEVALILNDEEKELVEEILEERHRTLLLEIAHTDHQHFKGVLRKRAEVLEAILQRLVVPA
Ga0187805_100224214	3300018007	Freshwater Sediment	LGLKNLEVLVTGTTVSLALSEEERELIREILEERHRTLLVEISHTDHHHFKTVLRKKAELLESVLSRFLVNA
Ga0187772_100016665	3300018085	Tropical Peatland	MLGTGTTVSLALNEEEKNLVQEILEERQRTLLLEISHTDHHDFKRTLLKNAEVIESVLRQLALHA
Ga0187772_100918072	3300018085	Tropical Peatland	VGNVVSLTLDEEERELVQEILEERQRTMLIEISHTDHYEFKVELRKKAELLDSVVSRLAVPA
Ga0187772_102167513	3300018085	Tropical Peatland	MTATEVTLTLSDEEKELIQEILEERHRSLLMEISHTDHHHFKVVLQKKMRLLESLLTRLAVPA
Ga0187772_105624691	3300018085	Tropical Peatland	MTATEVSLTLNEEERELIQETLEERHRTLLLEIAHTDHHHFKMVLRKKAEMLESLLNRLTVAA
Ga0187769_1000009735	3300018086	Tropical Peatland	MPGKVAMTATEVTLTLSDEEKELIQEILEERHRSLLMEISHTDHHHFKVVLQKKARLLESVLTRLAVPV
Ga0187769_100243422	3300018086	Tropical Peatland	MTEVSLTLDEEERELIQEILEERHRTLLREISHTDHHDFKVALRRKAELLESVLSRLMVH
Ga0187769_102715302	3300018086	Tropical Peatland	VGNVVSLTLDEEERELIEEILEERQRTVLIEISHTDHYEFKVELRKKAELLESVVSRLAVPA
Ga0187769_106426992	3300018086	Tropical Peatland	MTGTEVSLALSEEERELLREVLEERHRTLLREISRTDHHHFKAVLRKKADLLESVLNRFMVHA
Ga0187769_113710891	3300018086	Tropical Peatland	MTETALSLTLNEEESELIQEILEERHRTLLMEISHTDHHHFKVVLRKKAELLESILNRLVVHA
Ga0187769_114485772	3300018086	Tropical Peatland	VSLTLDEEERELIEDILEERQRTMLVEISHTDHYEFKVELRKKAELLESVVNRLAVHA
Ga0187771_1000010118	3300018088	Tropical Peatland	MTGSEVALTLSEEEKELVQEVLEERHRTLLMEISHTDHHHFKVALRKKAELLESVLNRFAVHA
Ga0187771_100237446	3300018088	Tropical Peatland	MTGNGFSIALNEEERELIQEVLEERHRTLLMEISHTDHHDFKVGLRKKAELLENVLSRFMVHA
Ga0187771_103170951	3300018088	Tropical Peatland	VGNVVSLTLDEEERELIEEILEERQRTMLIEISHTDHYEFKVELRKKAELLESVVNRLAVHA
Ga0187771_108262322	3300018088	Tropical Peatland	MTGTEVSLTLSEEERELIQEILEERHRTLLMEISHTDHHHFKVALRKKAELLENVLNRFMVHA
Ga0187771_111445691	3300018088	Tropical Peatland	SEKERELIQEILEERHRTLLMEISHTDHHHFKAVLRKKAELLESVLNRFMVHA
Ga0187770_101622992	3300018090	Tropical Peatland	MTEVSLTLDEEERELIQEILEERHRTLLREISHTDHHDFKVALRRKAELLESVLSRFMVH
Ga0187770_103392782	3300018090	Tropical Peatland	VGNVVSLTLDEEERELIEEILEERQRTMLIEISHTDHYEFKVELRKKAELLDSVVSRLAVHA
Ga0187770_106459661	3300018090	Tropical Peatland	MTGNGLSITLNEEERELIQEVLEERHRTLLMEISHTDHHDFKVGLRKKAELLENVLSRFMVHA
Ga0187770_106958981	3300018090	Tropical Peatland	MTGTVVSLTLDEEERELIQEILEERHRTLLMEISHADHHDFKVELRKKAELVENVLSRFAVHA
Ga0187770_109263152	3300018090	Tropical Peatland	MTETALSLTLNEEESELIQEILEERHRTLLLDISHTDHHHFKVVLRKKAELLESILNRLAVHA
Ga0066655_106439442	3300018431	Grasslands Soil	MNDPVLTLNLTEDERFLLQEILEEHHRTLMMEISHTDHSHFKMVLRKKAELLESLLSRFAAQAA
Ga0187793_10143212	3300019241	Peatland	VAVTLTEEEKDVVQEILEEQHRMLLLEIANTDHHHFKYVLRKKTELLESVLNRLMVAA
Ga0187795_11956683	3300019251	Peatland	VSLTLSDEERELLSEILEGRQRTLLREISRADHHEFKVALQKKAELLESLLRRFMIHA
Ga0187798_10313392	3300019275	Peatland	VSLTLDEEERELIEEILEERQRTMLVEISHTDHYEFKVELRKKAELLESVVNRLAEHA
Ga0187800_11796862	3300019278	Peatland	WEVAMTATEVSLTLNEEERELVQEVLEERHRTLLLEIAHTDHQHFKMVLRKQANLLESILSRFAVSA
Ga0187800_15094311	3300019278	Peatland	GGIMTGTMISIAMSEEERDFLQEVLEERHRTLLMEISHTDHHHFKAVLRKRAVLLESLLNRLLAHA
Ga0187800_18866241	3300019278	Peatland	GMLGTGTTVSLALNEEEKNLVQEILEERQRTLLLEISHTDHHDFKRTLLKNAEVIESVLRQLALHA
Ga0187797_10086542	3300019284	Peatland	VGNVVSLTLDEEERELIEEILEERQRTMLIEISHTDHYEFKVELRKKAELLESVVSRLAVPA
Ga0187797_10505652	3300019284	Peatland	VVSLTLDEEERELIEEILEERQRTMLVEISHTDHYEFKVELRKKAELLESVVSRLAVHA
Ga0187797_14669731	3300019284	Peatland	PGKVAMTATEVTLTLSDEEKELIQEILEERHRSLLMEISHTDHHHFKVVLQKKARLLESVLTRLAVPV
Ga0187797_15770231	3300019284	Peatland	AMIDELSLTLSEKERELLEEILEERHRTLLMEIANTEHHDFKVVLRKKAQLLESILERIAVAV
Ga0213853_115640981	3300021861	Watersheds	MSAAEMEVLVTGTTVSLTLSEEERELIQEILEERHRTLLVEISHTDHHHFKTVLRKKAELLESVLSRFLVTA
Ga0209471_11965722	3300026318	Soil	MNATTCELVLNEEERDLILDILEERHRTLLVEISHTDHHHFKLVLRKKAEMLESVLSRLIAQTQETTGMSAAS
Ga0209418_10786062	3300027371	Forest Soil	MNATTCELILSEEERELMRDILEERHRTLLVEISHTDHHHFKLVLRKKAEMLESVLSRLIVQD
Ga0208043_100005062	3300027570	Peatlands Soil	MTGTVTSFTLSDEERDLVQEILEERHRILLIEISHTDHLHFRTVLRKKAELLESVLNRFVATAA
Ga0209580_100029702	3300027842	Surface Soil	MTGTVVALTLNDEERDLVQEILEERHRTLLLEIAHTDHLHFKQVLRKKAGLLESVLTRFMQPV
Ga0209517_1000041815	3300027854	Peatlands Soil	MTGSAVSLTLSEEERELVQEILEERHRTLLVEVSHTDHHHFKAVLRKKAELLESVLSRFMVHA
Ga0209166_106546732	3300027857	Surface Soil	MTGTVVSLALNDEERVLIQELLEDRYRTLLLEIAHTDHHHFKVVLRKKADLVESLM
Ga0209166_106931612	3300027857	Surface Soil	VVSLALNDEERVLIQELLEDRYRTLLLEIAHTDHHHFKVVLRKKADLVESLMSRFLVHA
Ga0209067_100109014	3300027898	Watersheds	MSAAEMEVLVTGTTVSLTLSEEERELIQEILEERHRTLLVEISHTDHHHFKTVLRKKAELLESVLSRFLVNA
Ga0209067_100263112	3300027898	Watersheds	VTGTTVSLTLSEEERELIQEILEERHRTLLVEISHTDHHHFKTVLRKKAELLESVLSRFLVTA
Ga0209698_100012692	3300027911	Watersheds	VTGTTVSLTLSDEERELIQEILEERHRTLLVEISHTDHHHFKMVLRRKAELLELVLSRFLVNA
Ga0209698_100399821	3300027911	Watersheds	MSAAEMEVLVTGTTVSLTLSEEERELIQEILEERHRTLLVEISHTDHHHFKTVLRKKAELLESVLSRFL
Ga0209698_100474363	3300027911	Watersheds	MAGTAVSVTLSEEERDLIQEILEERHRTLLVEISHTDHHHFKAVLRKKADLLESVLSRFMVHA
Ga0209698_100533171	3300027911	Watersheds	VTGTTVSLTLSEEERELIQEILEERHRTLLVEISHTDHHHFKTVLRKKAELLESVLSRFL
Ga0209698_101801412	3300027911	Watersheds	VTGTMVSLTLSEEERELIQKILEEQHRTLLVEISQTDHHHFKTVLRKEAEALESVLGRFLVNA
Ga0209698_102374971	3300027911	Watersheds	VTGTMVSLTLSEEEQDLIQEILEEQHRTLLLEIAHTDHHHFKTVLQKKAEVLESVLSRFLVNA
Ga0209698_110875612	3300027911	Watersheds	VTGTMVSLTLREEEQELIQEILEEQHRTLLLEIAHTDHHHFKTVLQKKAEVLESVLSRFLVNA
Ga0311301_102068563	3300032160	Peatlands Soil	MLTLKKLEVLVTGTMVSLTLSEEEREVIQEILEEQHRTLLLEISYTDHHHFKTLLRKKAEVLESVLSRFLVNA
Ga0311301_103309522	3300032160	Peatlands Soil	MNATTCELVLNEEERELILDILEERHRTLLVEISHTDHHHFKLVLRKKAEMLESVLSRLIAQTQETTGLSAVS
Ga0311301_103868002	3300032160	Peatlands Soil	MTSVSLMLSEEERDLIQEILEERHRTLLVEISQTDHHHFKAVLRKKAELLESVLSRFMVH
Ga0311301_104357072	3300032160	Peatlands Soil	MTGTVTSFTLSDEERDLVQEVLEERHRILLIEISHTDHLHFRTVLRKKAELLESVLNRFVATAA
Ga0311301_110595542	3300032160	Peatlands Soil	MTGAVTSLTLSDEERDLVQEILEERHRILLLEISHTDHLHFKTVLRKKADLLESVLNRFLAAVA
Ga0335078_1000284912	3300032805	Soil	MTGTVVQVTLTEDERELVQEILEERHRTLLFEISHTDHHHFKGVLRKKAELLESVLSRFVVNA
Ga0335078_100388136	3300032805	Soil	MVEGFVGVCMTEISLTLDKEERELIHEVLEERHRTMLMEISHTDHHDFKVALRKKAEILESVLSKFMVSA
Ga0335078_111644482	3300032805	Soil	VTGTTVSLTLSDEERDLIQEILEERHRTLLLEISHTDHHHFKTVLRKKAELLESVLSRFLVNV
Ga0335070_103683131	3300032829	Soil	VPMTGTLISLTFDEEERDLVQEILEERHRTLLMEISHTDHHHFKVVLRRKAELLESILSRFVVHA
Ga0335077_106112232	3300033158	Soil	MTEISLTLDKEERELIHEVLEERHRTMLMEISHTDHHDFKVALRKKAEILESVLSKFMVS
Ga0314861_0000109_68974_69165	3300033977	Peatland	MTGTAVSLTLNEEESELIQEILEERHRTLLMEISHTDHHQFKIVLRKKAGVLESILNRFAVHA
Ga0314861_0035238_656_847	3300033977	Peatland	MTGTEVSLTLSEEERELLQEILEERHRTLLREISHTDYHHFKVALRKKAELLEAVLNRFMVHA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085010

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences