NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F085238

Metagenome / Metatranscriptome Family F085238

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F085238
Family Type Metagenome / Metatranscriptome
Number of Sequences 111
Average Sequence Length 82 residues
Representative Sequence MANRKRTKNKPYQRVLKFPKAKGKIIAEVELSISPDYNIIEIVFQDKTSLTFNLESCLQVVPELVSWKSGSYKPLKRWRSVHSV
Number of Associated Samples 59
Number of Associated Scaffolds 111

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 75.00 %
% of genes near scaffold ends (potentially truncated) 1.80 %
% of genes from short scaffolds (< 2000 bps) 0.90 %
Associated GOLD sequencing projects 47
AlphaFold2 3D model prediction Yes
3D model pTM-score0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (96.396 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil
(16.216 % of family members)
Environment Ontology (ENVO) Unclassified
(37.838 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(59.459 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 5.36%    β-sheet: 24.11%    Coil/Unstructured: 70.54%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 111 Family Scaffolds
PF12762DDE_Tnp_IS1595 9.91
PF12686DUF3800 2.70
PF00072Response_reg 1.80
PF04679DNA_ligase_A_C 1.80
PF15956DUF4760 1.80
PF04101Glyco_tran_28_C 0.90
PF05593RHS_repeat 0.90
PF10546P63C 0.90
PF13610DDE_Tnp_IS240 0.90
PF13020NOV_C 0.90
PF13620CarboxypepD_reg 0.90
PF03235DUF262 0.90
PF01381HTH_3 0.90
PF02896PEP-utilizers_C 0.90
PF12681Glyoxalase_2 0.90
PF02518HATPase_c 0.90
PF00933Glyco_hydro_3 0.90
PF14206Cys_rich_CPCC 0.90
PF12244DUF3606 0.90
PF02581TMP-TENI 0.90

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 111 Family Scaffolds
COG1793ATP-dependent DNA ligaseReplication, recombination and repair [L] 1.80
COG0352Thiamine monophosphate synthaseCoenzyme transport and metabolism [H] 0.90
COG1472Periplasmic beta-glucosidase and related glycosidasesCarbohydrate transport and metabolism [G] 0.90
COG1479DNAse/DNA nickase specific for phosphorothioated or glycosylated phage DNA, GmrSD/DndB/SspE family, contains DUF262 and HNH nuclease domainsDefense mechanisms [V] 0.90
COG3209Uncharacterized conserved protein RhaS, contains 28 RHS repeatsGeneral function prediction only [R] 0.90

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A96.40 %
All OrganismsrootAll Organisms3.60 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300009098|Ga0105245_10007780All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae9391Open in IMG/M
3300011332|Ga0126317_10923231All Organisms → cellular organisms → Bacteria → Acidobacteria694Open in IMG/M
3300013105|Ga0157369_10064359All Organisms → cellular organisms → Bacteria3949Open in IMG/M
3300027857|Ga0209166_10007083All Organisms → cellular organisms → Bacteria → Acidobacteria7510Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil16.22%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere10.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere10.81%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere9.01%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere8.11%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.21%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil4.50%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.60%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere3.60%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.60%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.70%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.80%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.80%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.90%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.90%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.90%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.90%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.90%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.90%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated0.90%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.90%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.90%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.90%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001305Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004800Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005537Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1EnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300011332Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300015193Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300020069Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026527Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)EnvironmentalOpen in IMG/M
3300027376Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027857Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300030847Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
C688J14111_10000003303300001305SoilMAAHKSKSNQRVLRFPKARGKIIAEVELSISPDYNVVEIVFQDKTSLTFNIESCFQVTPELVSWKSGKYHPLKRWRPVHSV*
Ga0063455_10000878143300004153SoilMADSKRTKKKPYQRVHKFPTAKGKIVSEVELSISPDYRIIEIVFQDKTSLTFNLESCLQVTPELVSWKSGSYKPLKRWRTVHSV*
Ga0063455_10001318433300004153SoilMAKTKGIKSKKPYQRVQRFREAKGKVIAEVELAISPDYNIIEIVFQDKTSLSFNLEPCFQVVPELVNWKSGSYKPLKRWRPVHSR*
Ga0062595_10259905913300004479SoilIEIVFQDKTSLTFNLESCLQVVPELVSWKSESYKPLKRWRPVHSV*
Ga0058861_1177090813300004800Host-AssociatedERRIMAVSKRTKSKSSQRVHKFPMAKGKIIAEVELSISPDYNVIEIVFKDKTSLSFNIEPCFQVVPELVNWKSGEYKPLKRWRPVHSV*
Ga0070683_10083730523300005329Corn RhizosphereMAVRKRTKKKPYQRVMKFPAAKGKIIAEVELSISPDYRIIEIIFQDKTSLTFNLESCLQVAPELVSWKSGSYKPLKRWRSVHSV*
Ga0070683_10163109213300005329Corn RhizosphereLSISPDYRIIEIVFQDKTSLTFNLESCLQVVPELVSWKSGSYKPLKRWRPVHSV*
Ga0070661_10174677813300005344Corn RhizosphereMAVSKRTKSKSSQRVHKFPMAKGKVIAEVELSISADYNIIEIVFDDKTSLCFNLESRVQIAPELVSWKSGSYKPVRRWRPVLSV*
Ga0070692_1071794223300005345Corn, Switchgrass And Miscanthus RhizosphereSRTRKSYSRILKFTKAKGKIIAEVELSISPDYNVVEIVFQDKTSLSFNIESCFQVTPELVSWKSGSYKPLKRWRSVHSV*
Ga0070713_10000558923300005436Corn, Switchgrass And Miscanthus RhizosphereMAVSKRTKSKPDQRVQKFPAAKGKIIAEVELSLSPDYNIIEIVFSDKTSLNFQIEPCFQVVPEMVNWKSGEYKPIKRWRPVHSV*
Ga0070713_10106345713300005436Corn, Switchgrass And Miscanthus RhizosphereMAAHKSSKRKKSTSFQRVQKFPAAKGKIVAEVELSMSPDYRIIEIVFQDKTSLTFNLESCLQVTPELVSWKAGKYDPLKRWRPVHSV*
Ga0070681_1014198033300005458Corn RhizosphereMASSKPSKRRNSDQRVLKFPKAKGKVIAEVELSISSDYNIIEIVFDDKTSLCFNLESRVQIAPELVSWKAGEYKPLKRWRPVLSV*
Ga0070681_1068272913300005458Corn RhizosphereHKFPMAKGKIIAEVELSISPDYNVIEIVFKDKTSLSFNIEPCFQVVPELVNWKSGEYKPLKRWRPVHSV*
Ga0070681_1068702313300005458Corn RhizosphereMAVSKATRSRARKKAAPYQRVLKFPTAKGKIIAEVELSISPDYRIIEIIFQDKTSLTFNLESCLQVVPELVSWKSGSYKPLKRWRSVHSV*
Ga0070681_1201767613300005458Corn RhizosphereMAANKTKRSRPGEKAYRRVLKFPKAKGKIIAEVELSISPDYNIIEIIFQDKTSLTFNLEPCLQVGPELVSWKSGSYKPLRRWRPVHRV*
Ga0070699_10035392213300005518Corn, Switchgrass And Miscanthus RhizosphereFPQAKGKIIAGMELSISPDFNIIEVVFEDKTSIGFEIVPCFQVVPELVNWKSGSYKPMKRWPAVHSV*
Ga0070699_10147396823300005518Corn, Switchgrass And Miscanthus RhizosphereMAVSKATRSRARKKAAPYQRVLKFPTAKGKIIAEVELSISPDYRIIEIIFQDKTSLTFNLESCLQVTPEVVSWKSGSYKPLKRWRSVHSV*
Ga0073909_10001703113300005526Surface SoilMAAHKSSKRKKSAPYQRVQKFPMAKGKIVAEVELSISPDYRIIEVIFQDKTSLTFNLESCLQVVPELVSWKSGSYKPLKRWRSVHSV*
Ga0073909_1052777613300005526Surface SoilEAKGKIIAEVELSLSPDHNIIEIVFQDKTALNFELEPCFTVFPETTNWKTGEYKPIRRWRPVHSRPSR*
Ga0070679_10025845543300005530Corn RhizosphereMAVSKRTKSKSSQRVHKFPMAKGKVIAEVELSISADYNIIEIVFDDKTSLCFNLESRVQIAPELVSWKAGEYK
Ga0070684_10185668313300005535Corn RhizosphereMAVSKRTKSKSSQRVHKFPMAKGKVIAEVELSISADYNIIEIVFDDKTSLCFNLESRVQIAPELVSWKSGSYKPVRRWR
Ga0070730_1005729313300005537Surface SoilMAVSKRTKNTSSRRVLRFPEAKGKIIAEVELSLSPDHNIIEIVFQDKTALNFELEPCFTVFPETTDWRAGEYKPIRRWRPVHSRPSR*
Ga0068853_10019883233300005539Corn RhizosphereMAVSKRTKKSTYQRVMKFPKAKGKIIAEVELSISPDYRIIEIIFQDKTSLTFNLESCLQVTPEIVSWKSGSYKPLKRWRPVHSV*
Ga0068853_10133491723300005539Corn RhizosphereQRVLKFPTAKGKIVAEVELSISPDYRIIEIVFQDKTSLTFNLESCLQVVPELVSWKSGSYKPMKRWRPVHS*
Ga0070693_10037278723300005547Corn, Switchgrass And Miscanthus RhizosphereMAVSKRTKSKSSQRVQKFPAAKGKIIAEVELSISPDYNIVEIVFTDKTSLNFQIEPCFQVVPETVSWKSGEYKPLKRWRPVHSV*
Ga0068855_10004324953300005563Corn RhizosphereMAVSKRTKSKSSQRVHKFPMAKGKIIAEVELSISPDYNVIEIVFKDKTSLSFNIEPCFQVVPELVNWKSGEYKPLKRWRPVHSV*
Ga0066703_1084702413300005568SoilMAVSKRTKTSQRVHKFPTAKGKIIADVELSLSPDFNVIEIVFQDKTSLSFNLESCFQVTPELVSWKSGSYKPLKRWRP
Ga0066702_1064349513300005575SoilAKGKVIAEVELAISPEYNIIEIVFQDKTSLSFNLESCLQVVPELVNWKSGSYKPIKRWRPVHSRSSDV*
Ga0066702_1075683813300005575SoilMAKSNARSSRAARKAYKRVHQFPTAKGKIIADVELSVSPDYNVIEIAFQDKTSLSFNLDPCFQVTPELVSWKSGSYKPLKRWPTVPSV*
Ga0068852_10159020413300005616Corn RhizosphereMAVSKATRSRARKKAAPYQRVLKFPTAKGKIIAEVELSISPDYRIIEIVFQDKTSLTFNLESCLQVTPEIVSWKSGSYKPLK
Ga0068852_10281311613300005616Corn RhizosphereMAVSKRIKSKPNQRVQKFREAKGKVIAEVELSLSPDYNIIEIVFQDKTSLNFEIKPCFQIVPEIVNWKSGEYKPIKRWPAVHSV*
Ga0070717_1183120723300006028Corn, Switchgrass And Miscanthus RhizosphereQRVLRFPKAKGKIIAEVELAISPDYNIIEIVFQDKTSLSFNLEPCFQIFPELVNWKSGNYKPLKRWRPVHSRSSRG*
Ga0075436_10136800513300006914Populus RhizosphereLAVSKATRSRARKKATPYQRVHKFPTAKGKVVSEVELSISPDYRIIEIVFQDKTSLTFNLESCLQVTPELVSWKSGS
Ga0105240_1005931863300009093Corn RhizosphereMAKGKIIAEVELSISPDYNVIEIVFKDKTSLSFNIEPCFQVVPELVNWKSGEYKPLKRWRPVHSV*
Ga0105240_1013631513300009093Corn RhizosphereMAKGKVIAEVELSISADYNIIEIVFDDKTSLCFNLESRVQIAPELVSWKSGSYKPVRRWRPVLSV*
Ga0105240_1032167133300009093Corn RhizosphereLLSSKRKNSDQRVHKFPKAKGKVVAEVELSISPDYNIIEIVFDDKTSLCFNLESRVQIAPELISWKASEYKPIKRWRPVLSV*
Ga0105240_1103193523300009093Corn RhizosphereMAASQSSKQRVHKFPQAKGKIIAEVELSISPDYNIIEIIFQDKTSLTFNLEPCLQVGPELVSWKSGSYKPLRRWRPVHRV*
Ga0105240_1115071213300009093Corn RhizosphereMAKSKGIRSGKRKKAYQRVLRFPKARGKIIAEVELAISPDYNIIEIVFQDKTSLSFNLEPCFQVVPELVSWKSGSYKPLRRWRPIHSV*
Ga0105240_1141336213300009093Corn RhizosphereMAANKSKANQRVLKFPQAKGKIIAEVELSLSPDYNVVEIVFTDKTSLNFQIEPCFQVVPETVSWKSGSYKPLKRWRPVHSV*
Ga0105245_1000778033300009098Miscanthus RhizosphereMAAHKSNKRKKTAPYQRVQKFPMAKGKIVAEVELSISPDYRIIEVIFQDKTSLTFNLESCLQVTPEIVSWKSGSYKPLKRWRPVHSV*
Ga0105242_1008882653300009176Miscanthus RhizosphereMAKRKGTRTKPYQRVHKFPAAKGKIIAEVELSMSPDYRIIEIVFQDKTSLTFNLESCLQVTPEIVSWKSGSYKPLKRWRPVHSV*
Ga0105238_1292130913300009551Corn RhizosphereMAVSKRTKSKSSERVIKFPQAKGKIVAEVELSLSSDYNIVEVVFQDKTSLTFNLESCLQVVPELVSWKSGSYKPLKRWRSVHSV*
Ga0105238_1302382513300009551Corn RhizosphereKRTKSKSSQRVLKFPAAKGKIVAEVELSISPDYRIIEIVFQDKTSLTFNLESCLQVTPEIVSWKSGSYTPLKRWRPVHSV*
Ga0134125_1004747843300010371Terrestrial SoilVEGKMAVSKATRSGKRNKAYQRLFKFPQAKGKIIAEVELSISPDYNIIEIVFQDKTSLTFNLESCLQVVPELVSWKSGSYKPMKRWRPVHSV*
Ga0134125_1030643023300010371Terrestrial SoilLATPKVTPLTARKKADPYNRVLKFPLAKGKTIAEVELSLSPDYNVIEIVFADKTSLTFNVEPCFRVFPELVSWKSGNYKPLKRWRSVHSV*
Ga0134125_1259889713300010371Terrestrial SoilMARNKPTRNKSDSRILKFPKAKGKVVAEVELSLSPDYRIIEIVFDDKTSLTFNLESRVQVTPELVSWKSGSYKPLKRWRPVLSV*
Ga0134125_1273815623300010371Terrestrial SoilATMADRKRTKKKPYQRVLKFPKAKGKIIAEVELSISPDYNIIEIIFQDKTSLTFNLESCLQVVPELVSWKSGTYKPLKRWRSVHSV*
Ga0134125_1303273813300010371Terrestrial SoilMAAHKSKSNQRVLRFPKAKGKIIAEVELSISHDYRIIEIVFQDKTSLTFNLESCLQVTPELVSWKSGKYQPLKRWRPVHSI*
Ga0134128_1023817113300010373Terrestrial SoilIMAALKSNKRKKAAPFQRVLKFPTAKGKIIAEVELSISPDYRIIEIIFQDKTSLTFNLESCLQVAPELVSWKSGSYKPLKRWRPVHSV*
Ga0134128_1028088223300010373Terrestrial SoilMAANKSKSNQRVQKFPAAKGKIIAEVELSISPDYNVVEIVFTDKTSLNFQIEPCFQVAPETVSWKSGTYKPLKRWRPVHSV*
Ga0134128_1032646013300010373Terrestrial SoilMAVSKATRSRKRKKAYQRVLKFPKAKGKIIAEVELSISPDYNIIEIVFQDKTSLTFNLESCLQVVPELVSWKSESYKPLKRWRPVHSV*
Ga0134128_1115234523300010373Terrestrial SoilMAANKSNRNQRVQKFPAAKGKTVAEVELSLSPDYNVVEIVFTDKTSLNFQIEPCFQVVPETVSWKSGEYKPIKRWRPVHSV*
Ga0134128_1175764713300010373Terrestrial SoilVEGKMAVSKATRSGVRKKAYQQVLRFPKAKGKIIAEVELSISPDYRIIEIVFQDKTSLTFNLESCLQVVPELVSWKS
Ga0134128_1236046413300010373Terrestrial SoilAKGKIIAEVELAISPDYNIIEIVFQDKTSLTFNLEPCFQVFPEFVSWKGGSYRPLKRWRPVHSS*
Ga0134128_1269305813300010373Terrestrial SoilMAVSKRTKKKSSQRVHKFPTAKGKIIAEVELSVSPDYNVIEIVFEDKTSLSFNLEPCFQVTPELVSWKSGSYKPMKRWPPVHSV*
Ga0134128_1315913813300010373Terrestrial SoilMAKGKIIAEVELSISPDYRIIEIIFQDKTSLTFNLESCLQVVPELVSWKSGSYKPLKRWRPVHS*
Ga0105239_1115139213300010375Corn RhizosphereMAKGKIIAEVELSVSPDYNVIEIVFADKTSLTFNLESCFQVTPELVSWKSGKYNPLKRWRPVHSV*
Ga0105239_1204933023300010375Corn RhizosphereLERRLMAVSKRTKSKPDQRVQKFPAAKGKVIAEVELSLSPDYNIVEIVFTDKTSLNFQIEPCFQVVPELVNWKSGEYKPIRRWRSVHSV*
Ga0105239_1272476113300010375Corn RhizosphereMAKTKGIKREKPDQHVQRFREAKGKTIAEVELSLSPDYNVIEVVFTDKTSLTFNVEPCFRIIPEHVSWKSGNYRPIKRWRPVHSL*
Ga0105239_1300054013300010375Corn RhizosphereMAAHKRTRNKPHSRILKFPQAKGKIVAEVELSLSSDYNIVEVVFQDKTSLTFNLESCLQVTPEIVSWKSGSYKPLKRWRPVHSI*
Ga0134126_1006478313300010396Terrestrial SoilMLRVEPEHAPDHNPPSVERRIMAAHKSKSNQRVLRFPKAKGKIIAEVELSISHDYRIIEIVFQDKTSLTFNLESCLQVTPELVSWKAGKYQPLKRWRPVHSV*
Ga0134126_1006663443300010396Terrestrial SoilMAKRKGIRTKPYQRVQRFPTAKGKVVSEVELSISPDYRIIEIVFQDKTSLTFNLESCLQVTPELVSWKSGSYKPTKRWRPVHS*
Ga0134126_1024972133300010396Terrestrial SoilMADRKRTKKKPYQRVLKFPKAKGKIIAEVELSISPDYNIIEIIFQDKTSLTFNLESCLQVVPELVSWKSGTYKPLKRWRSVHSV*
Ga0134126_1205935823300010396Terrestrial SoilMADRKRIRKKPHNRVVKFPQAKGKIIAGMEVSISPDFNIIEVIFEDKTSIGLEIVPCFQVVPELVNWKSGSYKPMKRWKPVHSV*
Ga0134126_1292304313300010396Terrestrial SoilMAVSKGSRTRQSRNRILKFPQAKGKIVAEVELSLSSDYNIVEVVFQDKTSLTFNLESCLQVTPEIVSWKSGSYKPLKRWRPVHSV*
Ga0126383_1006037323300010398Tropical Forest SoilMAVSKATRSGTRKKAYQRVLRFPKAKGKIIAEVELAISPDYNIIEIVFQDKTSLSFYLEPCFQIFPELVNWKSGNYKPLKRWRPVHSRSSRV*
Ga0126317_1092323123300011332SoilMAVHKRTKKKPYQRVLKFPTAKGKIIAEVELSISPDYRIIEIVFQDKTSLTFNLESCLQVTPELVNWKSGSYKPMKRWR
Ga0150985_10351885213300012212Avena Fatua RhizosphereMAVHKSTKRKSAYQRVHKFPQAKGKIIAELELSLSPDYNIIEVVFQDKTSLTFNLDSRVQIAPELVSWKSGSYRPLKRWRPVLSI*
Ga0150985_10860087613300012212Avena Fatua RhizosphereMAAHKSKRKQSPERVLTFPQAKGKTVAEVELSMSPDYRIIEVVFQDKTSLTFNLESCLQVTPEIVSWKSGSYKPRKRWRPVHSV
Ga0150985_10914658833300012212Avena Fatua RhizospherePQHIPNHKSPSNERRLMAVSKRTKPSQRVHKFPTAKGKIIADVELSVSPDYNVVEIVFQDKTSLTFNLESCFQVTPELVSWKSGSYKPVRRWRSVHSV*
Ga0150985_11860053713300012212Avena Fatua RhizosphereMAVSKRTKPSQRVHKFPTAKGKIIADVELSLSPDFNVIEIVFQDKTSLSFNLESCFQAPELVNWKSGEYKPIRRWRSVHSV*
Ga0150984_10941474213300012469Avena Fatua RhizosphereMAVHKATRSRARKKAAPYQRVLKFPTAKGKIIAEVELSISPDYNIIEIVFQDKTSLTFNLESCLQVVPELVSWKSGSYKPLKRWRPVHSV*
Ga0164301_1076333413300012960SoilVLVITERALTTNHLPDEKRLMGVCKATRSRARKKAAYTRVRKFPLAKGKTVAEVELSLSPDYNVIEVVFADKTSLTFNVEPCFRIIPEHVSWKSGNYKPLKRWRPVHSE*
Ga0164301_1094146523300012960SoilHKSPSEKGESMASAKSSKRTQRVLRFAKAKGKIIAEVELSISPDYRIIEIVFQDKTSLTFNLESPLHVTPELVSWKPGKYQPLKRWRPVHSV*
Ga0164309_1170547923300012984SoilIVAEVELSISPDYRIIEIIFQDKTSLTFNLESCLQVTPEIVSWKSGSYKPLKRWRPVHSV
Ga0164304_1021961423300012986SoilMAAHKSKSNQRVLRFPKAKGKIVAEVELSISPDYRIIEIVFQDKTSLTFNLESCLQVTPELVSWKSGSYKPLKRGRPVHSV*
Ga0157370_1137773223300013104Corn RhizosphereMAKGKIIAEVELSISPDYNIIEIIFQDKTSLTFNLEPCLQVGPELVSWKSGSYKPVRRWRPVLSV*
Ga0157369_1006435973300013105Corn RhizosphereAVSKRTKSKSSQRVHKFPMAKGKIIAEVELSISPDYNVIEIVFKDKTSLSFNIEPCFQVVPELVNWKSGEYKPLKRWRPVHSV*
Ga0157369_1035966123300013105Corn RhizosphereMRGGMAANKTKRSRPGEKAYRRVLKFPKAKGKIIAEVELSISPDYNIIEIIFQDKTSLTFNLEPCLQVGPELVSWKSGSYKPLRRWRPVHRV*
Ga0157369_1093979123300013105Corn RhizosphereMAASKSSKRNQRVLKFPKAKGKVIAEVELSISPDYNIIEIVFQDKTSLTFNLESCLQVVPELVSWKSGSYKPMKRWRPVHSV*
Ga0157369_1095798333300013105Corn RhizosphereMADRKRIKKKPHQRVQRFREAKGKVVSEVELSMSPDFNIIEFIFEDKTALSFEIVPCFQVVPEMVNWKSGNYKPMKRWKPVHSV*
Ga0157369_1116351623300013105Corn RhizosphereFPKAKGKVIAEVELSISSDYNIIEIVFDDKTSLCFNLESRVQIAPELVSWKAGEYKPLKRWRPVLSV*
Ga0157369_1172247223300013105Corn RhizosphereMAASQSSKQRVHKFPQAKGKIIAEVELSVSPDYNVIEIVFQDKTSLTFNLESCFQVTPEIVSWKSGSYKPLKRWRPVHSV*
Ga0157369_1184909213300013105Corn RhizosphereMAAHKRTRNKPHSRVLKFPQAKGKIVAEVELSLSSDYNIVEVVFQDKTSLTFNLESCLQVVPELVSWKSGKYHPLKRWRPVHSV*
Ga0157369_1231191713300013105Corn RhizosphereLLSSKRKNSDQRVHKFPKAKGKVVAEVELSISPDYNIIEIVFDDKTSLCFNLESRIQVAPELVSWESGSYKPLRR
Ga0157369_1248397823300013105Corn RhizosphereFPTAKGKIVAEVELSISPDYRIIEIVFQDKTSLTFNLESCLQVTPEIVSWKSGSYKPLKRWRPMHS*
Ga0157374_1238367423300013296Miscanthus RhizosphereMAKSKGIKKKPYQRVQKFPAAKGKIVAEVELSISPDYRIIEIVFQDKTSLTFNLEPCLQVTPEIVSWKSGSYKPLKRWQPIHS*
Ga0157372_1231185533300013307Corn RhizosphereSYPLTTRKKADPYNRVLKFPLAKGKTIAEVELSLSPDYNVIEIVFADKTSLTFNVEPCFRVFPELVSWKSGNYKPLKRWRSVHSV*
Ga0157372_1348166813300013307Corn RhizosphereTKPDQRVQRFREAKGKTIAEVELSLSPDYNVIEVVFTDKTSLTFNVEPCFRIIPEHVSWKSGNYRPLKRWRPIPSM*
Ga0167668_107322513300015193Glacier Forefield SoilIADVELFVSPEYRIIEIIFEDKTSLSFGLDSCIRVFPKLINWKTGNYNPLKRWRPVHSKSFRA*
Ga0066662_1186105913300018468Grasslands SoilVATNKSKRTQRVLKFPKARGKVIAEVELSLSPDYNVIEIVFQDKTSLTFNLESCLQVTPELVSWKSGKYHPLKRWRPVHSV
Ga0197907_1051008813300020069Corn, Switchgrass And Miscanthus RhizosphereMAVSKRTKSKSSQRVHKFPMAKGKIIAEVELSISPDYNVIEIVFKDKTSLSFNIEPCFQVVPELVNWKSGEYKPLKRWRPVHSV
Ga0207707_1006798323300025912Corn RhizosphereMAVSKRTKSKSSQRVHKFPMAKGKVIAEVELSISADYNIIEIVFDDKTSLCFNLESRVQIAPELVSWKSGSYKPVRRWRPVLSV
Ga0207707_1023247923300025912Corn RhizosphereVAASKRTKKKPYQRVQKFPAAKGKIVAEVELSISPDYRIIEIVFQDKTSLTFNLESCLQVTPEIVSWKSGSYKPLKRWRPVHSV
Ga0207649_1168188323300025920Corn RhizosphereLLSSKRKNSDQRVHKFPKAKGKVVAEVELSISPDYNIIEIVFDDKTSLCFNLESRVQIAPELVSWKSGSYKPVRRWRPVLSV
Ga0207687_1001164763300025927Miscanthus RhizosphereMAAHKSNKRKKTAPYQRVQKFPMAKGKIVAEVELSISPDYRIIEVIFQDKTSLTFNLESCLQVTPEIVSWKSGSYKPLKRWRPVHSV
Ga0207700_1006249813300025928Corn, Switchgrass And Miscanthus RhizosphereMAVSKRTKSKPDQRVQKFPAAKGKIIAEVELSLSPDYNIIEIVFSDKTSLNFQIEPCFQVVPEMVNWKSGEYKPIKRWRPVHSV
Ga0207686_1031616523300025934Miscanthus RhizosphereMAKRKGTRTKPYQRVHKFPAAKGKIIAEVELSMSPDYRIIEIVFQDKTSLTFNLESCLQVTPEIVSWKSGSYKPLKRWRPVHSV
Ga0207667_1189336513300025949Corn RhizosphereMAVSKRTKSKSSQRVQKFPAAKGKIVAEVELSLSPDYNIVEIVFTDKTSLNFQIEPCFQVVPETVSWKSGTYKPLKRWRPVHSV
Ga0207639_1059810123300026041Corn RhizosphereQRIPNHKSPSVERRIMAVSKRTKKSTYQRVMKFPKAKGKIIAEVELSISPDYRIIEIIFQDKTSLTFNLESCLQVTPEIVSWKSGSYKPLKRWRPVHSV
Ga0207639_1143893823300026041Corn RhizosphereMASSKPSKRRNSDQRVLKFPKAKGKVIAEVELSISPDYNIIEIVFDDKTSLCFNLESRVQIAPELVSWKAGEYKPLKRWRPVLSV
Ga0207698_1237459413300026142Corn RhizosphereMAVSKRIKSKPNQRVQKFREAKGKVIAEVELSLSPDYNIIEIVFQDKTSLNFEIKPCFQIVPEIVNWKSGEYKPIKRWPAVHSV
Ga0209059_122244513300026527SoilKGKVIAEVELAISPEYNIIEIVFQDKTSLSFNLESCLQVVPELVNWKSGSYKPIKRWRPVHSRSSDV
Ga0209004_103221923300027376Forest SoilATTKGIKRKKPYQRVHKFPAAKGKIIAEVELAISPDYNIIEIVFQDKTSLTFNLESCLQVVPELVNWKSGSYKPMKRWRPVHSR
Ga0209811_10006192113300027821Surface SoilMAAHKSSKRKKSAPYQRVQKFPMAKGKIVAEVELSISPDYRIIEVIFQDKTSLTFNLESCLQVVPELVSWKSGSYKPLKRWRSVHSV
Ga0209166_10007083103300027857Surface SoilMAVSKRTKNTSSRRVLRFPEAKGKIIAEVELSLSPDHNIIEIVFQDKTALNFELEPCFTVFPETTDWRAGEYKPIRRWRPVHSRPSR
Ga0075405_1206988113300030847SoilMAKSKRTRSRSGNKPYERVQKFPMAKGKIVAEVELSISPDYRIIEVIFQDKTSLTFNLESCLQVTPEIVSWKSGSYKPLKRWPTLHS
Ga0075405_1208684523300030847SoilMANRKRTKNKPYQRVLKFPKAKGKIIAEVELSISPDYNIIEIVFQDKTSLTFNLESCLQVVPELVSWKSGSYKPLKRWRSVHSV
Ga0170834_10971473913300031057Forest SoilMAVPKRTKNNQRVLKFPKARGKVIAEVELSLSPDYNVVEIVFADKTSLTFNLESCFQVTPELVSWKSGSYKPLKRWPA
Ga0170824_10317542113300031231Forest SoilMAKSKRTRSRSGNKPYERVQKFPMAKGKIVAEVELSISPDYRIIEVNFQDKTSLTFNLESCLQVTPEIVSWKSGSYKPLKRWPTLHS
Ga0170824_11109572913300031231Forest SoilMAAHKSSKRNQRVLKFPKAKGKIIADVELSLSPDYNVIEIVFADKTSLTFNLESCFQVTPELVSWKSGSYKPVKRWPAVHSV

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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