NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F085326

Metagenome / Metatranscriptome Family F085326

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F085326
Family Type Metagenome / Metatranscriptome
Number of Sequences 111
Average Sequence Length 52 residues
Representative Sequence MSQPWTCAKCDQPILKGQPFTTAIVPGRLPNPGVVSGKVLVHKNEEDCKKR
Number of Associated Samples 81
Number of Associated Scaffolds 111

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 83.78 %
% of genes near scaffold ends (potentially truncated) 34.23 %
% of genes from short scaffolds (< 2000 bps) 64.86 %
Associated GOLD sequencing projects 71
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (89.189 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil
(33.333 % of family members)
Environment Ontology (ENVO) Unclassified
(51.351 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(54.054 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 1.96%    β-sheet: 19.61%    Coil/Unstructured: 78.43%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 111 Family Scaffolds
PF05494MlaC 9.01
PF04392ABC_sub_bind 7.21
PF00118Cpn60_TCP1 5.41
PF05036SPOR 4.50
PF03136Pup_ligase 3.60
PF00072Response_reg 2.70
PF12172DUF35_N 2.70
PF03118RNA_pol_A_CTD 1.80
PF03989DNA_gyraseA_C 1.80
PF01070FMN_dh 1.80
PF13378MR_MLE_C 1.80
PF04020Phage_holin_4_2 1.80
PF00496SBP_bac_5 0.90
PF01106NifU 0.90
PF13379NMT1_2 0.90
PF13474SnoaL_3 0.90
PF13276HTH_21 0.90
PF02374ArsA_ATPase 0.90
PF03729DUF308 0.90
PF04226Transgly_assoc 0.90
PF02371Transposase_20 0.90
PF03476MOSC_N 0.90
PF00355Rieske 0.90
PF03098An_peroxidase 0.90
PF09943DUF2175 0.90
PF06723MreB_Mbl 0.90
PF01176eIF-1a 0.90
PF02403Seryl_tRNA_N 0.90
PF02518HATPase_c 0.90
PF03699UPF0182 0.90
PF02899Phage_int_SAM_1 0.90
PF00587tRNA-synt_2b 0.90
PF07519Tannase 0.90

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 111 Family Scaffolds
COG2854Periplasmic subunit MlaC of the ABC-type intermembrane phospholipid transporter MlaCell wall/membrane/envelope biogenesis [M] 9.01
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 7.21
COG0459Chaperonin GroEL (HSP60 family)Posttranslational modification, protein turnover, chaperones [O] 5.41
COG0069Glutamate synthase domain 2Amino acid transport and metabolism [E] 1.80
COG0188DNA gyrase/topoisomerase IV, subunit AReplication, recombination and repair [L] 1.80
COG0202DNA-directed RNA polymerase, alpha subunit/40 kD subunitTranscription [K] 1.80
COG1304FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomeraseEnergy production and conversion [C] 1.80
COG1950Uncharacterized membrane protein YvlD, DUF360 familyFunction unknown [S] 1.80
COG0172Seryl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.90
COG0361Translation initiation factor IF-1Translation, ribosomal structure and biogenesis [J] 0.90
COG0694Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domainPosttranslational modification, protein turnover, chaperones [O] 0.90
COG1077Cell shape-determining ATPase MreB, actin-like superfamilyCell cycle control, cell division, chromosome partitioning [D] 0.90
COG1615Uncharacterized membrane protein, UPF0182 familyFunction unknown [S] 0.90
COG2261Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein familyGeneral function prediction only [R] 0.90
COG3217N-hydroxylaminopurine reductase subunit YcbX, contains MOSC domainDefense mechanisms [V] 0.90
COG3247Acid resistance membrane protein HdeD, DUF308 familyGeneral function prediction only [R] 0.90
COG3547TransposaseMobilome: prophages, transposons [X] 0.90
COG4973Site-specific recombinase XerCReplication, recombination and repair [L] 0.90
COG4974Site-specific recombinase XerDReplication, recombination and repair [L] 0.90

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms89.19 %
UnclassifiedrootN/A10.81 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000956|JGI10216J12902_100366541All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria720Open in IMG/M
3300002558|JGI25385J37094_10000192All Organisms → cellular organisms → Bacteria13944Open in IMG/M
3300002558|JGI25385J37094_10055574All Organisms → cellular organisms → Bacteria1311Open in IMG/M
3300002560|JGI25383J37093_10003025All Organisms → cellular organisms → Bacteria5034Open in IMG/M
3300002560|JGI25383J37093_10086190All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium942Open in IMG/M
3300002560|JGI25383J37093_10104635Not Available821Open in IMG/M
3300002560|JGI25383J37093_10127438All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria705Open in IMG/M
3300002561|JGI25384J37096_10005878All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria4530Open in IMG/M
3300002561|JGI25384J37096_10066862All Organisms → cellular organisms → Bacteria1327Open in IMG/M
3300002561|JGI25384J37096_10076294All Organisms → cellular organisms → Bacteria → Proteobacteria1220Open in IMG/M
3300002561|JGI25384J37096_10185020All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria623Open in IMG/M
3300002562|JGI25382J37095_10053574All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1546Open in IMG/M
3300002562|JGI25382J37095_10083639All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1168Open in IMG/M
3300002562|JGI25382J37095_10103249All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1003Open in IMG/M
3300002908|JGI25382J43887_10000017All Organisms → cellular organisms → Bacteria30076Open in IMG/M
3300002908|JGI25382J43887_10035283All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2710Open in IMG/M
3300002908|JGI25382J43887_10035768All Organisms → cellular organisms → Bacteria2693Open in IMG/M
3300002911|JGI25390J43892_10116315Not Available608Open in IMG/M
3300002912|JGI25386J43895_10043063All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1314Open in IMG/M
3300002912|JGI25386J43895_10078829All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium885Open in IMG/M
3300002914|JGI25617J43924_10317650All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria538Open in IMG/M
3300005181|Ga0066678_10258303All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1129Open in IMG/M
3300005445|Ga0070708_100059815All Organisms → cellular organisms → Bacteria3398Open in IMG/M
3300005445|Ga0070708_101643895All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium597Open in IMG/M
3300005536|Ga0070697_100255760Not Available1498Open in IMG/M
3300005555|Ga0066692_10636348All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria666Open in IMG/M
3300005558|Ga0066698_10049522All Organisms → cellular organisms → Bacteria2648Open in IMG/M
3300005568|Ga0066703_10022191All Organisms → cellular organisms → Bacteria3294Open in IMG/M
3300005586|Ga0066691_10012541All Organisms → cellular organisms → Bacteria3999Open in IMG/M
3300005586|Ga0066691_10757293All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria573Open in IMG/M
3300005713|Ga0066905_100442263All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1066Open in IMG/M
3300006049|Ga0075417_10700884Not Available520Open in IMG/M
3300006844|Ga0075428_100009756All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria10671Open in IMG/M
3300006845|Ga0075421_100005550All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria15281Open in IMG/M
3300007265|Ga0099794_10071469All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1700Open in IMG/M
3300009012|Ga0066710_100072931All Organisms → cellular organisms → Bacteria4419Open in IMG/M
3300009038|Ga0099829_10249236All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1448Open in IMG/M
3300009090|Ga0099827_11408536Not Available607Open in IMG/M
3300009100|Ga0075418_10574120All Organisms → cellular organisms → Bacteria1213Open in IMG/M
3300009137|Ga0066709_100423500All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1854Open in IMG/M
3300009137|Ga0066709_101655506All Organisms → cellular organisms → Bacteria912Open in IMG/M
3300009137|Ga0066709_102383400Not Available720Open in IMG/M
3300009147|Ga0114129_10453868All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1681Open in IMG/M
3300009147|Ga0114129_11557831Not Available810Open in IMG/M
3300009792|Ga0126374_11093162All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria632Open in IMG/M
3300009799|Ga0105075_1064361Not Available503Open in IMG/M
3300009810|Ga0105088_1005785All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1726Open in IMG/M
3300009816|Ga0105076_1089189All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius sp. associated proteobacterium Delta 1589Open in IMG/M
3300009820|Ga0105085_1033682All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium907Open in IMG/M
3300010078|Ga0127487_154846Not Available575Open in IMG/M
3300010320|Ga0134109_10055524All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1319Open in IMG/M
3300010322|Ga0134084_10420453Not Available526Open in IMG/M
3300010326|Ga0134065_10045274All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1338Open in IMG/M
3300010329|Ga0134111_10001244All Organisms → cellular organisms → Bacteria8188Open in IMG/M
3300010337|Ga0134062_10606234All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300011269|Ga0137392_10019990All Organisms → cellular organisms → Bacteria4680Open in IMG/M
3300011271|Ga0137393_10079780All Organisms → cellular organisms → Bacteria2630Open in IMG/M
3300011271|Ga0137393_10092390All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium2455Open in IMG/M
3300012096|Ga0137389_10547259All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium994Open in IMG/M
3300012096|Ga0137389_11238797All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria639Open in IMG/M
3300012189|Ga0137388_10036501All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria3880Open in IMG/M
3300012207|Ga0137381_10614252All Organisms → cellular organisms → Bacteria947Open in IMG/M
3300012355|Ga0137369_10020629All Organisms → cellular organisms → Bacteria6224Open in IMG/M
3300012360|Ga0137375_10090609All Organisms → cellular organisms → Bacteria → Proteobacteria3151Open in IMG/M
3300012379|Ga0134058_1016516Not Available501Open in IMG/M
3300012918|Ga0137396_10034911All Organisms → cellular organisms → Bacteria3357Open in IMG/M
3300012923|Ga0137359_11054479All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria696Open in IMG/M
3300012927|Ga0137416_10106824All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2116Open in IMG/M
3300012972|Ga0134077_10040670All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1687Open in IMG/M
3300012976|Ga0134076_10157605All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium933Open in IMG/M
3300017997|Ga0184610_1049525All Organisms → cellular organisms → Bacteria1238Open in IMG/M
3300017997|Ga0184610_1056274All Organisms → cellular organisms → Bacteria1174Open in IMG/M
3300018028|Ga0184608_10017661All Organisms → cellular organisms → Bacteria2542Open in IMG/M
3300018052|Ga0184638_1154492All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium827Open in IMG/M
3300018052|Ga0184638_1308172All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300018053|Ga0184626_10003641All Organisms → cellular organisms → Bacteria5746Open in IMG/M
3300018063|Ga0184637_10030160All Organisms → cellular organisms → Bacteria → Proteobacteria3281Open in IMG/M
3300018063|Ga0184637_10693413All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300018431|Ga0066655_10008778All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria4286Open in IMG/M
3300018431|Ga0066655_10051561All Organisms → cellular organisms → Bacteria → Proteobacteria2123Open in IMG/M
3300018431|Ga0066655_10801351All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium640Open in IMG/M
3300018482|Ga0066669_10470961All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1082Open in IMG/M
3300018482|Ga0066669_11758633All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300021073|Ga0210378_10043402All Organisms → cellular organisms → Bacteria1777Open in IMG/M
3300026296|Ga0209235_1036925All Organisms → cellular organisms → Bacteria2469Open in IMG/M
3300026296|Ga0209235_1061782All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1747Open in IMG/M
3300026296|Ga0209235_1069933All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1604Open in IMG/M
3300026296|Ga0209235_1070462All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1596Open in IMG/M
3300026297|Ga0209237_1289791Not Available502Open in IMG/M
3300026298|Ga0209236_1109612All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1231Open in IMG/M
3300026307|Ga0209469_1009891All Organisms → cellular organisms → Bacteria3629Open in IMG/M
3300026313|Ga0209761_1028098All Organisms → cellular organisms → Bacteria3414Open in IMG/M
3300026329|Ga0209375_1036699All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria2583Open in IMG/M
3300026333|Ga0209158_1068465All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1404Open in IMG/M
3300026333|Ga0209158_1231518All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium635Open in IMG/M
3300026524|Ga0209690_1040308All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2164Open in IMG/M
3300026551|Ga0209648_10015221All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria6712Open in IMG/M
3300027013|Ga0209884_1003519All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1350Open in IMG/M
3300027169|Ga0209897_1026943All Organisms → cellular organisms → Bacteria817Open in IMG/M
3300027187|Ga0209869_1007349All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1185Open in IMG/M
3300027332|Ga0209861_1015288All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1148Open in IMG/M
3300027671|Ga0209588_1010779All Organisms → cellular organisms → Bacteria2753Open in IMG/M
3300027846|Ga0209180_10016452All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria3876Open in IMG/M
3300027909|Ga0209382_10005488All Organisms → cellular organisms → Bacteria16512Open in IMG/M
3300027949|Ga0209860_1035500All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium663Open in IMG/M
3300027957|Ga0209857_1002603All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria3958Open in IMG/M
3300031720|Ga0307469_11195162All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium718Open in IMG/M
3300032180|Ga0307471_100047024All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium3522Open in IMG/M
3300032180|Ga0307471_100063677All Organisms → cellular organisms → Bacteria3133Open in IMG/M
3300033811|Ga0364924_181615All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium504Open in IMG/M
3300034178|Ga0364934_0109015All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1043Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil33.33%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil15.32%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil10.81%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand9.01%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil8.11%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment7.21%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.31%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.70%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.70%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment1.80%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.90%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.90%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.90%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300002558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cmEnvironmentalOpen in IMG/M
3300002560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cmEnvironmentalOpen in IMG/M
3300002561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cmEnvironmentalOpen in IMG/M
3300002562Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002908Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002911Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cmEnvironmentalOpen in IMG/M
3300002912Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cmEnvironmentalOpen in IMG/M
3300002914Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cmEnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300009799Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_0_30EnvironmentalOpen in IMG/M
3300009810Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30EnvironmentalOpen in IMG/M
3300009816Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10EnvironmentalOpen in IMG/M
3300009820Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60EnvironmentalOpen in IMG/M
3300010078Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012379Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018052Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2EnvironmentalOpen in IMG/M
3300018053Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1EnvironmentalOpen in IMG/M
3300018063Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300026296Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026297Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026298Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026307Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)EnvironmentalOpen in IMG/M
3300026313Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)EnvironmentalOpen in IMG/M
3300026333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)EnvironmentalOpen in IMG/M
3300026524Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027013Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40 (SPAdes)EnvironmentalOpen in IMG/M
3300027169Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20 (SPAdes)EnvironmentalOpen in IMG/M
3300027187Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_50_60 (SPAdes)EnvironmentalOpen in IMG/M
3300027332Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40 (SPAdes)EnvironmentalOpen in IMG/M
3300027671Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300027949Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50 (SPAdes)EnvironmentalOpen in IMG/M
3300027957Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20 (SPAdes)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300033811Sediment microbial communities from East River floodplain, Colorado, United States - 28_j17EnvironmentalOpen in IMG/M
3300034178Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10216J12902_10036654123300000956SoilMRQPWTCAKCDQPILKGQPFTTAIVPGRLPNSGVVVSGKVLVHKNEEDCKKR*
JGI25385J37094_1000019293300002558Grasslands SoilMSQPWICAKCDEPILKNQRFTTAIVPGRRSNPDVVSGKVLVHKNEEDCKKR*
JGI25385J37094_1005557433300002558Grasslands SoilMRQPWTCARCDQPILKGQPFTTAIVPGRLPNPGVVSGKVLVHKNDEDCKKR*
JGI25383J37093_1000302513300002560Grasslands SoilVRRRVISGGSTMSQPWICAKCDRPILKSQPFTTAIVPGRSPNPGVVSGKVLVHKNEEDCQKD*
JGI25383J37093_1008619023300002560Grasslands SoilMSQPWICAKCDRPILKSQPFTTAIVPGRSPNPGVVSGKVLVHKNEEDCQKAPDGPRRLKQPP*
JGI25383J37093_1010463523300002560Grasslands SoilQPWTCAKCDQPILKGQPFTTAIVPGRLPNPGVVSGKVLVHKNEEDCKKR*
JGI25383J37093_1012743833300002560Grasslands SoilMSQHWTCAKCDQPILKGQPFTTAIVPGRSPKPGVVSGKVLVHKNERDCKKPQTADRL
JGI25384J37096_1000587823300002561Grasslands SoilMSQPWICAKCDRPILKSQPFTTAIVPGRSPNPGVVSGKVLVHKNEEDCQKD*
JGI25384J37096_1006686233300002561Grasslands SoilMRQPWTCARCDQPILKGQPXTTAIVPGRLPNPGVVSGKVLVHKNDEDCKKR*
JGI25384J37096_1007629433300002561Grasslands SoilTCAKCDQPILKGQPFTTAIVPGRLPNPGVVSGKVLVHKNEEDCKKR*
JGI25384J37096_1018502023300002561Grasslands SoilMSQQWTCAKCDQPILKGQPFTTAIVPGRSPKPGVVSGKVLVHKNEIDCKKPQTAYRL*
JGI25382J37095_1005357413300002562Grasslands SoilMSQPWTCAKCDQPILKGQPFTTAIVPGRSPKPGVVSGKVLV
JGI25382J37095_1008363933300002562Grasslands SoilMSQHWTCAKCDQPILKGQPFTTAIVPGRSPKPGVVSGKVLVHKNE
JGI25382J37095_1010324923300002562Grasslands SoilMSQPWTCAKCDQPILKGQPFTTAIVPGRLPNPGVVSGKVLVHKNEEDCKKR*
JGI25382J43887_10000017113300002908Grasslands SoilMSQPWTCAKCDQPILKGQPFTTAIVPGRSPKPGVVSGKVLVHKNEKDCKRPQTGR*
JGI25382J43887_1003528343300002908Grasslands SoilMSQPWTCAKSDQPILKGQPFTNYRPGRSPKPRRRLGKVLVHKNEEDCEKR*
JGI25382J43887_1003576843300002908Grasslands SoilMRQPWTCARXDQPILKGQPXXTAIVPGRLPNPGVVSGKVLVHKNDEDCKKR*
JGI25390J43892_1011631513300002911Grasslands SoilMSQQWTCAKCDQPILKGQPFTTAIVPGRSPKPGVVSGKVLVHKNERDCKKPQTADRL*
JGI25386J43895_1004306313300002912Grasslands SoilMSQXWTCAKCDQPILKGQPFTTAIVPGRSPKPGVVSGKVLVHKNERDCKKPQTADRV*
JGI25386J43895_1007882913300002912Grasslands SoilMSQPWTCAKSDQPILKGQPFTTTIVPGGRPTEARLGKVLVHKNEEDCEKR*
JGI25617J43924_1031765013300002914Grasslands SoilMSQHWTCAKCDQPILKGQPFTTAIVPGRSPKPGVVSGKVLVHKNEKDCKKPQTADRR*
Ga0066678_1025830323300005181SoilMRQPWTCARCDQPILKGQPFTTAIVPGRLPNPGVVSGKVLVHKNEEDCKKR*
Ga0070708_10005981523300005445Corn, Switchgrass And Miscanthus RhizosphereMSEHWICAKCDQPILKSQPFTRAIVPGRSPKPGVVSGKVLVHKNERDCKKPQTAYRL*
Ga0070708_10164389523300005445Corn, Switchgrass And Miscanthus RhizosphereMSQHWTCAKCDQPILKGQPFTTAIVPGRSPKPGVVSGKVLVHKNERDCKKPETAYRL*
Ga0070697_10025576023300005536Corn, Switchgrass And Miscanthus RhizosphereMSEHWICAKCDQPILKSQPFTRAIVPGRSPKPGVVSGKVLVHKNERDCKKPETAYRL*
Ga0066692_1063634813300005555SoilRYNMRQPWTCARCDQPILKGQPFTTAIVPGRLPNPDVVSGKVLVHKNEEDCKKR*
Ga0066698_1004952213300005558SoilMSQPWTCAKCDQPILKGQPFTTAIVPGRLPNPGVVSGKVLVHKNEKDCKKR*
Ga0066703_1002219143300005568SoilMMSQPWICAKCDRPILKSQPFTTAIVPGRSPNPGVVSGKVLVHKNEEDCQKD*
Ga0066691_1001254143300005586SoilMSQPWICAKCDRPILKSQPFTTAIVPGRSPNPGVVSGKVLVHKNEKDCQKD*
Ga0066691_1075729313300005586SoilMSQQWTCAKCDQPILKGQPFTTAIVPGRSPKPGVVSGKVL
Ga0066905_10044226313300005713Tropical Forest SoilMRQHWTCAKCDQPILKSQPFTRAIVPGRAPKPGVDSGKVLVHKNES
Ga0075417_1070088413300006049Populus RhizosphereYGLIGERYNMRQPWTCAKCDQPILKGQPFTTAIVPGRLPNTGVVVSGKVLVHKNEEDCKKR*
Ga0075428_10000975633300006844Populus RhizosphereMRQLWTCAKCDQPILKSQPFTRAIVAGRPPKPGVDSGKVLVHKDESDCRKPQTAHRL*
Ga0075421_10000555043300006845Populus RhizosphereMTRPWTCAKCDQPILKTQLFTTAIVAGRPPKPGVASGKVLVHKNEKDCKRPWTVYRL*
Ga0099794_1007146953300007265Vadose Zone SoilMSQHWTCAKCDQPILKGQPFTRAIVPGRSPKPGVVSGKVLVHKNERDCKKPPTADRL*
Ga0066710_10007293153300009012Grasslands SoilMSQPWICAKCDEPILRSQRFTTAIVPGRRSNPDVVSGKVLVHKNEEDCKKR
Ga0099829_1024923623300009038Vadose Zone SoilMSQPWICAKCDRPILKSQPFTTAIVPGRSPNPGVVSGKVLVHKNEEDCQKAPDGPKRLEQPP*
Ga0099827_1140853613300009090Vadose Zone SoilMSQQWTCAKCDQPILKGQPFTTAIVPGRSPKPGVVSGKVLVHKNEKDCKKPQTGR*
Ga0075418_1057412043300009100Populus RhizosphereWTCAKCDQPILKTQLFTTAIVAGRPPKPGVASGKVLVHKNEKDCKRPWTVYRL*
Ga0066709_10042350023300009137Grasslands SoilLIGERYNMRQPWTCARCDQPILKGQPFTTAIVPGRLPNPGVVSGKVLVHKNDEDCKKR*
Ga0066709_10165550613300009137Grasslands SoilMSQPWICAKCDEPILRSQRFTTAIVPGRRSNPDVVSGKVLVHKNEEDCKKR*
Ga0066709_10238340023300009137Grasslands SoilMSQPWICAKCDEPILKNQRFTTAIVPGRRSNPDVVSGKVLVHKNEEDCKKPR*
Ga0114129_1045386833300009147Populus RhizosphereLIGERYNMRQPWTCAKCDQPILKGQPFTTAIVPGRLPNTGVVVSGKVLVHKNEEDCKKR*
Ga0114129_1155783133300009147Populus RhizosphereMSQHWTCAKCDQPILKGQPFTTAIVPGRSPKPGVVSGKVLVHKNERDCKEPETAYRL*
Ga0126374_1109316223300009792Tropical Forest SoilMRQHWTCAKCDQPILKSQPFTRAIVPGRAPKPGVDSGKVLVHKNESDCRKPQTAYRL*
Ga0105075_106436113300009799Groundwater SandMRQPWTCARCDQPILKGQPFATAIVPGRLPNPGVVSGKVLVHKNEEDCKKR*
Ga0105088_100578513300009810Groundwater SandRDNMSQPWTCAKCDQPILKGQPFTTAIVPGRSPHPDVVSGKVLVHKNEEDCKKR*
Ga0105076_108918923300009816Groundwater SandMSQPWTCAKCDQPILKGQPFTTAIVPGRLPNPGVVSGKVLVHKNEEDCRKL*
Ga0105085_103368233300009820Groundwater SandMRQPWTCASDRPILKGQPFTTAIVPGRSPHPGVVS
Ga0127487_15484623300010078Grasslands SoilPWICAKCDETILKSQRFTTAIVPGRRSNPDVVSGKVLVHKNEEDCKKR*
Ga0134109_1005552423300010320Grasslands SoilMSQPWICAKCDRPILKSQPFTTAIVPGRRSNPDVVLGQVLVHKNEEDCKKR*
Ga0134084_1042045323300010322Grasslands SoilSKLGGRQEDQMSQPWICAKCDEPILKNQRFTTAIVPGRRSNPDVVSGKVLVHKNEEDCKKR*
Ga0134065_1004527423300010326Grasslands SoilMSQPWICAKCDRPILKSQPFTTAIVPGRRSNPDVVSGKVLVHKNEEDCKKR*
Ga0134111_1000124443300010329Grasslands SoilMSQPWICAKCDRPILNSQPFTTAIVPGRSPNPGVVSGKVLVHKNEEDCQKD*
Ga0134062_1060623423300010337Grasslands SoilMSQPWICAKCDEPILKNQRFTTAIVPGRRSNPDVVSGKVLVH
Ga0137392_1001999023300011269Vadose Zone SoilMSQPWTCAKCDQPILKGQPFTTAIVPGRLPNPGVVSAKVLVHKNEEDCKKR*
Ga0137393_1007978033300011271Vadose Zone SoilMSQPWICAKCDRPILKSQPFTTAIVPGRPPNPGVVSGKVLVHKNEEDCQKAPDGPRRLEQPP*
Ga0137393_1009239023300011271Vadose Zone SoilMSQHWTCAKCDQPILKGQPFTTAIVPGRSPKPGVVSGKVLVHKHDRDCKKSQTADRL*
Ga0137389_1054725913300012096Vadose Zone SoilMSQPWICAKCDRPILKSQPFTTAIVPGRSPHPGVVSGKVLVHKNEEDCQKALDGPRRL
Ga0137389_1123879713300012096Vadose Zone SoilMSQHWTCAKCDQQILKGQPFTTAIVPGRSPKPGVVSGKVLVHKNERDCKKPQTA
Ga0137388_1003650173300012189Vadose Zone SoilMSKPWICAKCDRPILKSQPFTTAIVPGRSPNPGVVSGKVLVHKNEEDCQKAPDGPRRLKQPP*
Ga0137381_1061425213300012207Vadose Zone SoilMSQPWTCAKCDQPILKGQPFTTAIVPGRLPNPGVISGKVLVHKNEEDCKKR*
Ga0137369_1002062933300012355Vadose Zone SoilMRQPWTCAKYDQPILKGQPFTTAIVPGRLPNPGVVGSRKVLVHKNEEDCKKC*
Ga0137375_1009060943300012360Vadose Zone SoilMRQPWTCAKYDQPILKGQPLTTAIVPGRLPNPGVVGSRKVLVHKNEEDCKKC*
Ga0134058_101651613300012379Grasslands SoilQPWICAKCDEPILKNQRFTTAIVPGRRSNPDVVSGKVLVHKNEEDCKKR*
Ga0137396_1003491133300012918Vadose Zone SoilMRQPWTCARCDQPIRKSQPFATAIVPGRVPNPGVVSRKVLGHKNEEDCKKR*
Ga0137359_1105447923300012923Vadose Zone SoilMSQQWTCAKCDQPILKSQPFTRAIVPGRSPNPGVVSGKVLVH
Ga0137416_1010682413300012927Vadose Zone SoilMSQHWTCAKCDQPILKGQPFTTAIVPGRSPKPGVVSGKVLVHKNERDCKKPQTADRL*
Ga0134077_1004067013300012972Grasslands SoilNMSQQWTCAKCDQPILKGQPFTTAIVPGRSPKPGVVSGKVLVHKNERDCKKPQTADRL*
Ga0134076_1015760523300012976Grasslands SoilMSQPWTCAKCDQPILKGQPFTTAIVPGRLPNPGVVSGKVLVHKNKEDCKKG*
Ga0184610_104952533300017997Groundwater SedimentLIWEKRYNMSQPWTCAKCDQPILKGQPFTTAIVPGRLPNPGVISGKVLVHKNEEDCKKR
Ga0184610_105627433300017997Groundwater SedimentLIWEKRYNMSQPWTCAKCDQPILKGQPFTTAIVPGRLPNPGVISGKVLVHKNEADCQKR
Ga0184608_1001766133300018028Groundwater SedimentMSQPWTCAKCDQPILKGQPFTTAIVPGRLPNPGVISGKVLVHKNEEDCKKR
Ga0184638_115449233300018052Groundwater SedimentMSQPWTCAKCDQPILKGQPFTTAIVPGRLPNPGVISGKV
Ga0184638_130817223300018052Groundwater SedimentTCAKCDQPILKGQPFTTAIVPGRLPNPGVISGKVLVHKNEADCQKR
Ga0184626_1000364153300018053Groundwater SedimentMSQPWTCAKCDQPILKGQPFTTAIVPGRLPNPGVISGKVLVHKNEADCQKR
Ga0184637_1003016023300018063Groundwater SedimentMSHPWTCAKSDQPILKGQPFTTTIVPRSPNRGVVSGKVLVHKNEED
Ga0184637_1069341313300018063Groundwater SedimentNMSQPWTCAKCDQPILKGQPFTTAIVPGRLPNPGVISGKVLVHKNEADCQKR
Ga0066655_1000877853300018431Grasslands SoilMSQQWTCAKCDQPILKGQPFTTAIVPGRSPKPGVVSGKVLVHKNERDCKKPQTADRL
Ga0066655_1005156123300018431Grasslands SoilMSQPWICAKCDEPILKNQRFTTAIVPGRRSNPDVVSGKVLVHKNEEDCKKR
Ga0066655_1080135123300018431Grasslands SoilMSQPWICAKCDRPILKSQPFTTAIVPGRSPNPGVVSGKVLVHKNEEDCQ
Ga0066669_1047096123300018482Grasslands SoilMMSQPWICAKCDRPILKSQPFTTAIVPGRSPNPGVVSGKVLVHKNEEDCQKD
Ga0066669_1175863323300018482Grasslands SoilCSKLGGRQEDQMSQPWICAKCDEPILKNQRFTTAIVPGRRSNPDVVSGKVLVHKNEEDCKKR
Ga0210378_1004340213300021073Groundwater SedimentPWTCAKCDQPILKGQPFTTAIVPGRLPNPGVISGKVLVHKNEEDCKKR
Ga0209235_103692533300026296Grasslands SoilMRQPWTCARCDQPILKGQPFTTAIVPGRLPNPGVVSGKVLVHKNDEDCKKR
Ga0209235_106178233300026296Grasslands SoilMSQPWTCAKSDQPILKGQPFTNYRPGRSPKPRRRLGKVLVHKNEEDCEKR
Ga0209235_106993333300026296Grasslands SoilMSQPWICAKCDRPILKSQPFTTAIVPGRSPNPGVVSGKVLVHKNEEDCQKAPDGPRRLKQPP
Ga0209235_107046213300026296Grasslands SoilMSQPWTCAKCDQPILKGQPFTTAIVPGRLPNPGVVSGKVLVHKNEEDCKKR
Ga0209237_128979113300026297Grasslands SoilSQPWTCAKSDQPILKGQPFTNYRPGRSPKPRRRLGKVLVHKNEEDCEKR
Ga0209236_110961223300026298Grasslands SoilMSQQWTCAKCDQPILKGQPFTTAIVPGRSPKPGVVSGKVLVHKNEIDCKKPQTAYRL
Ga0209469_100989123300026307SoilMSQPWICAKCDRPILKSQPFTTAIVPGRSPNPGVVSGKVLVHKNEEDCQKD
Ga0209761_102809873300026313Grasslands SoilMSQPWTCAKCDQPILKGQPFTTAIVPGRSPKPGVVSGKVLVHKNEKDCKRPQTGR
Ga0209375_103669943300026329SoilMMSQPWICAKCDRPILKSQPFTTAIVPGRSPNPGVVSGK
Ga0209158_106846523300026333SoilVIGERYNMRQPWTCARCDQPILKGQPFTTAIVPGRLPNPGVVSGKVLVHKNDEDCKKR
Ga0209158_123151813300026333SoilMSQPWICARCDRPILKSQPFTTAIVPGRSPNPGVVSGKVLVHKNEE
Ga0209690_104030813300026524SoilMSQPWTCAKSDQPILKGQPFTNYRPGRSPKPRRRLGKVLVHKNE
Ga0209648_1001522133300026551Grasslands SoilMSQHWTCAKCDQPILKGQPFTTAIVPGRSPKPGVVSGKVLVHKNEKDCKKPQTADRR
Ga0209884_100351923300027013Groundwater SandMRQPWTCARCDQPILKGQPFATAIVPGRLPNPGVVSGKVLVHKNEEDCKKR
Ga0209897_102694323300027169Groundwater SandMSQPWTCAKCDQPILKGQPFTTAIVPGRLPNPGVVSGKVLVHKNEEDCNKR
Ga0209869_100734913300027187Groundwater SandMRQPWTCASDRPILKGQPFTTAIVPGRSPHPGVVSGKVLVHKNDEDCKN
Ga0209861_101528823300027332Groundwater SandMRQPWTCARCDQPILKGQPFATAIVPRRLPNPGVVSGKVLVHKNEEDCKKR
Ga0209588_101077963300027671Vadose Zone SoilMSQPWTCAKCDQPILKGQPFTTAIVPGRLPNPGVVSGKVLVHKNEEDC
Ga0209180_1001645243300027846Vadose Zone SoilMSQPWICAKCDRPILKSQPFTTAIVPGRSPNPGVVSGKVLVHKNEEDCQKAPDGPKRLEQPP
Ga0209382_10005488103300027909Populus RhizosphereMRQLWTCAKCDQPILKSQPFTRAIVAGRPPKPGVDSGKVLVHKDESDCRKPQTAHRL
Ga0209860_103550023300027949Groundwater SandMSQPWTCTKSDQPILKGQPFTTTIVLGRSPNRGVVSGKVL
Ga0209857_100260333300027957Groundwater SandMRQPWTCARCDQPILKGQPFATAIVPGRLPNPGVVSGKVLVHKNEEDCRKR
Ga0307469_1119516233300031720Hardwood Forest SoilMSQPWTCAKCDQPILKGQPFTTAIVPGRLPNPGVVSGKVLVHKNKEDCKKG
Ga0307471_10004702463300032180Hardwood Forest SoilMSQPWICAKCDRPILKSQPFTTAIVPGRSPNPGVASGKVLVHKNEEDCQKE
Ga0307471_10006367743300032180Hardwood Forest SoilMSEHWICAKCDQPILKSQPFTRAIVPGRSPKPGVVSGKVLVHKNERDCKKPQMAYRL
Ga0364924_181615_392_5023300033811SedimentMSQPWTCAKCDQPILKGQPFTTAIVPGRLPNPGVVSG
Ga0364934_0109015_2_1273300034178SedimentMSQPWTCAKCDQPILKGQPFTTAIVPGRLPNPGVISGKVLVH

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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