Metagenome Family F085335

Basic Information
Family ID	F085335
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	66 residues
Representative Sequence	MRALSRRTWFFLVIAVAMLLLYEPTPDKFRWVNLALAGLALFWFVLFTIEDVGRARRVRRRVRGGSR
Number of Associated Samples	94
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	73.87 %
% of genes near scaffold ends (potentially truncated)	29.73 %
% of genes from short scaffolds (< 2000 bps)	84.68 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Most Common Taxonomy
Group	Bacteria (84.685 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (16.216 % of family members)
Environment Ontology (ENVO)	Unclassified (34.234 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.045 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.79% β-sheet: 0.00% Coil/Unstructured: 44.21%
Feature Viewer

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Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF01865	PhoU_div	45.05
PF01384	PHO4	39.64
PF05235	CHAD	7.21
PF02541	Ppx-GppA	1.80
PF13089	PP_kinase_N	1.80
PF13090	PP_kinase_C	1.80
PF00486	Trans_reg_C	0.90
PF05977	MFS_3	0.90
PF00528	BPD_transp_1	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG1392	Phosphate transport regulator YkaA, distantly related to PhoU, UPF0111/DUF47 family	Inorganic ion transport and metabolism [P]	45.05
COG0306	Phosphate/sulfate permease	Inorganic ion transport and metabolism [P]	39.64
COG3025	Inorganic triphosphatase YgiF, contains CYTH and CHAD domains	Inorganic ion transport and metabolism [P]	7.21
COG5607	CHAD domain, binds inorganic polyphosphates	Function unknown [S]	7.21
COG0248	Exopolyphosphatase/pppGpp-phosphohydrolase	Signal transduction mechanisms [T]	3.60
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.90

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.68 %
Unclassified	root	N/A	15.32 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.68 %
Unclassified	root	N/A	15.32 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.68 %
Unclassified	root	N/A	15.32 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	40.54 %
Unclassified	root	N/A	15.32 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.50 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	40.54 %
Unclassified	root	N/A	15.32 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.80 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	31.53 %
Unclassified	root	N/A	15.32 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.80 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	24.32 %
Unclassified	root	N/A	15.32 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.50 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.80 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	24.32 %
Unclassified	root	N/A	15.32 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.50 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	1.80 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	24.32 %
Unclassified	root	N/A	15.32 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.50 %
Burkholderia cepacia complex	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia cepacia complex	1.80 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	24.32 %
Unclassified	root	N/A	15.32 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.50 %
Burkholderia cenocepacia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia cepacia complex → Burkholderia cenocepacia	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459019\|G14TP7Y02JYFC3	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300000891\|JGI10214J12806_12182965	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300000956\|JGI10216J12902_103091615	All Organisms → cellular organisms → Bacteria	1449	Open in IMG/M
3300001305\|C688J14111_10000836	All Organisms → cellular organisms → Bacteria	8045	Open in IMG/M
3300002568\|C688J35102_120191219	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300002568\|C688J35102_120969926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3683	Open in IMG/M
3300003267\|soilL1_10056007	All Organisms → cellular organisms → Bacteria	1301	Open in IMG/M
3300003324\|soilH2_10046446	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300004022\|Ga0055432_10007481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1936	Open in IMG/M
3300004024\|Ga0055436_10133096	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300004025\|Ga0055433_10104001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	648	Open in IMG/M
3300004081\|Ga0063454_100132781	All Organisms → cellular organisms → Bacteria	1275	Open in IMG/M
3300004114\|Ga0062593_100036576	All Organisms → cellular organisms → Bacteria	2882	Open in IMG/M
3300004114\|Ga0062593_100161480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1719	Open in IMG/M
3300004114\|Ga0062593_100273411	All Organisms → cellular organisms → Bacteria	1416	Open in IMG/M
3300004114\|Ga0062593_100577085	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300004114\|Ga0062593_101526073	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300004157\|Ga0062590_101770223	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300004463\|Ga0063356_100130937	All Organisms → cellular organisms → Bacteria	2810	Open in IMG/M
3300004463\|Ga0063356_100570142	All Organisms → cellular organisms → Bacteria	1520	Open in IMG/M
3300004479\|Ga0062595_101311952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia cepacia complex	652	Open in IMG/M
3300004479\|Ga0062595_101640269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	602	Open in IMG/M
3300005093\|Ga0062594_100162538	All Organisms → cellular organisms → Bacteria	1487	Open in IMG/M
3300005093\|Ga0062594_101922187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	629	Open in IMG/M
3300005183\|Ga0068993_10139284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	809	Open in IMG/M
3300005204\|Ga0068997_10005047	All Organisms → cellular organisms → Bacteria	1679	Open in IMG/M
3300005328\|Ga0070676_10969954	Not Available	636	Open in IMG/M
3300005329\|Ga0070683_100510943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1148	Open in IMG/M
3300005334\|Ga0068869_100511908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1003	Open in IMG/M
3300005334\|Ga0068869_100741130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	840	Open in IMG/M
3300005338\|Ga0068868_100696439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	908	Open in IMG/M
3300005338\|Ga0068868_101526667	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300005347\|Ga0070668_100653274	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300005353\|Ga0070669_100863047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	772	Open in IMG/M
3300005354\|Ga0070675_101112196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	726	Open in IMG/M
3300005355\|Ga0070671_100350592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1260	Open in IMG/M
3300005366\|Ga0070659_100968365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	746	Open in IMG/M
3300005434\|Ga0070709_10189685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1449	Open in IMG/M
3300005437\|Ga0070710_10156448	All Organisms → cellular organisms → Bacteria	1410	Open in IMG/M
3300005441\|Ga0070700_101044165	All Organisms → cellular organisms → Bacteria → Proteobacteria	674	Open in IMG/M
3300005444\|Ga0070694_101006090	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300005456\|Ga0070678_100319085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1326	Open in IMG/M
3300005457\|Ga0070662_100843260	Not Available	780	Open in IMG/M
3300005545\|Ga0070695_100294398	All Organisms → cellular organisms → Bacteria	1197	Open in IMG/M
3300005548\|Ga0070665_100596723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1117	Open in IMG/M
3300005564\|Ga0070664_101198689	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300005719\|Ga0068861_101192222	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300005719\|Ga0068861_101739921	Not Available	617	Open in IMG/M
3300005836\|Ga0074470_10656911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3156	Open in IMG/M
3300005836\|Ga0074470_11149879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	61697	Open in IMG/M
3300005843\|Ga0068860_100753000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	986	Open in IMG/M
3300005844\|Ga0068862_100454398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1208	Open in IMG/M
3300006163\|Ga0070715_10003715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4906	Open in IMG/M
3300006806\|Ga0079220_10313753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia cepacia complex → Burkholderia cenocepacia	976	Open in IMG/M
3300009098\|Ga0105245_10023391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5423	Open in IMG/M
3300009176\|Ga0105242_10345950	All Organisms → cellular organisms → Bacteria	1372	Open in IMG/M
3300010045\|Ga0126311_10164363	All Organisms → cellular organisms → Bacteria	1593	Open in IMG/M
3300010391\|Ga0136847_12884778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6100	Open in IMG/M
3300012893\|Ga0157284_10256727	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300012908\|Ga0157286_10260406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	616	Open in IMG/M
3300012957\|Ga0164303_10724597	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300014326\|Ga0157380_13050611	Not Available	534	Open in IMG/M
3300014969\|Ga0157376_11436617	Not Available	722	Open in IMG/M
3300015077\|Ga0173483_10225357	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300015371\|Ga0132258_10142824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5731	Open in IMG/M
3300017965\|Ga0190266_10120341	All Organisms → cellular organisms → Bacteria → Proteobacteria	1122	Open in IMG/M
3300017965\|Ga0190266_10378713	Not Available	776	Open in IMG/M
3300018433\|Ga0066667_10469883	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300018466\|Ga0190268_10185246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1115	Open in IMG/M
3300018476\|Ga0190274_10198568	All Organisms → cellular organisms → Bacteria	1760	Open in IMG/M
3300019356\|Ga0173481_10848985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
3300021078\|Ga0210381_10060208	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300021445\|Ga0182009_10080153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1452	Open in IMG/M
3300021445\|Ga0182009_10128172	All Organisms → cellular organisms → Bacteria	1186	Open in IMG/M
3300022886\|Ga0247746_1105462	Not Available	692	Open in IMG/M
3300025535\|Ga0207423_1008584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1557	Open in IMG/M
3300025538\|Ga0210132_1004440	All Organisms → cellular organisms → Bacteria	1791	Open in IMG/M
3300025580\|Ga0210138_1075708	Not Available	798	Open in IMG/M
3300025580\|Ga0210138_1123609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	631	Open in IMG/M
3300025900\|Ga0207710_10757954	Not Available	510	Open in IMG/M
3300025901\|Ga0207688_10032152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2899	Open in IMG/M
3300025905\|Ga0207685_10013018	All Organisms → cellular organisms → Bacteria	2560	Open in IMG/M
3300025912\|Ga0207707_11130638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	637	Open in IMG/M
3300025917\|Ga0207660_10193088	All Organisms → cellular organisms → Bacteria	1587	Open in IMG/M
3300025921\|Ga0207652_11193246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	663	Open in IMG/M
3300025927\|Ga0207687_11448644	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300025933\|Ga0207706_11037728	Not Available	687	Open in IMG/M
3300025937\|Ga0207669_10588328	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300025945\|Ga0207679_10958543	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300025955\|Ga0210071_1006719	All Organisms → cellular organisms → Bacteria	1324	Open in IMG/M
3300025961\|Ga0207712_10762302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	848	Open in IMG/M
3300026075\|Ga0207708_10000708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	25214	Open in IMG/M
3300026325\|Ga0209152_10016456	All Organisms → cellular organisms → Bacteria	2533	Open in IMG/M
3300028755\|Ga0307316_10119276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	929	Open in IMG/M
3300028771\|Ga0307320_10202399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	776	Open in IMG/M
3300031170\|Ga0307498_10405885	Not Available	537	Open in IMG/M
3300031170\|Ga0307498_10456530	Not Available	514	Open in IMG/M
3300031199\|Ga0307495_10239987	Not Available	517	Open in IMG/M
3300031366\|Ga0307506_10029903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1445	Open in IMG/M
3300031366\|Ga0307506_10131009	All Organisms → cellular organisms → Bacteria → Proteobacteria	859	Open in IMG/M
3300031547\|Ga0310887_10491123	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300031562\|Ga0310886_10956479	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300031716\|Ga0310813_11805752	Not Available	574	Open in IMG/M
3300031834\|Ga0315290_10057682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3171	Open in IMG/M
3300031854\|Ga0310904_10583682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	761	Open in IMG/M
3300031938\|Ga0308175_100105838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2603	Open in IMG/M
3300031949\|Ga0214473_11406472	Not Available	709	Open in IMG/M
3300032179\|Ga0310889_10622496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	558	Open in IMG/M
3300032342\|Ga0315286_10075008	All Organisms → cellular organisms → Bacteria	3601	Open in IMG/M
3300033412\|Ga0310810_10950939	Not Available	744	Open in IMG/M
3300034820\|Ga0373959_0223914	Not Available	505	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	69.37%
Host-Associated	Host-Associated	29.73%
Engineered	Engineered	0.90%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.95%
Plants	Host-Associated → Plants	29.73%
Aquatic	Environmental → Aquatic	14.41%
Solid Waste	Engineered → Solid Waste	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.02%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.71%
Marine	Environmental → Aquatic → Marine	9.01%
Freshwater	Environmental → Aquatic → Freshwater	3.60%
Sediment	Environmental → Aquatic → Sediment	1.80%
Grass	Engineered → Solid Waste → Grass	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.54%
Loam	Environmental → Terrestrial → Soil → Loam	14.41%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.71%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.91%
Wetlands	Environmental → Aquatic → Marine → Wetlands	9.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.31%
Lake	Environmental → Aquatic → Freshwater → Lake	2.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.80%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.90%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.90%
Composting	Engineered → Solid Waste → Grass → Composting	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	12.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.91%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	9.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.31%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.60%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.60%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.90%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.90%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.22%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	9.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	9.01%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.50%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.60%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.70%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.80%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.80%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.80%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.80%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.90%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.90%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.90%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459019	Litter degradation MG4	Engineered	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004022	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1	Environmental	Open in IMG/M
3300004024	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2	Environmental	Open in IMG/M
3300004025	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D1	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005183	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1	Environmental	Open in IMG/M
3300005204	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D2	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022886	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5	Environmental	Open in IMG/M
3300025535	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1 (SPAdes)	Environmental	Open in IMG/M
3300025538	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025580	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1 (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025955	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4MG_00551170	2170459019	Switchgrass, Maize And Mischanthus Litter	GAFILAYVVYIPLKGTHMRALSRRTRFFLVIAVAMLLLYEPTPETFRWVNLALAGLALFWFVLFTIEDVGRARRVRHRVRGGSR
JGI10214J12806_121829652	3300000891	Soil	MNMLARRTWFFLVIAVAMLLLYDPTPAKFRWVNLFLAGLAMFWFILFAIEDLSRARREGRRMGGSR*
JGI10216J12902_1030916152	3300000956	Soil	VRLGRRTWGFLVIAFTMLLLYAPTPSNLRWINLASAALAIVWFCLFASEDLGAARRARRRGGDG*
C688J14111_100008363	3300001305	Soil	MRSLSRRTWFFLVIVAAMLLLYEPTPEKFRWVNVFLAGLALFWFVLFAIEDVGYARRVRRRSRGGPR*
C688J35102_1201912192	3300002568	Soil	MLSRRTWFFLVIAIAMLLLYDPTPPTFQWVNVALAALALFWFVLFTIEDVGHARRVRRRVRGGRP*
C688J35102_1209699264	3300002568	Soil	VRALSRRTWFFLVIAVAMLLLYDPTPEAFQWVNVMLAALALFWFVLFSIEDVGRARRVRRRIRGGPR*
soilL1_100560071	3300003267	Sugarcane Root And Bulk Soil	MNINRRTWGFLVVAIAMVLLLEPTPEKYRWVNVALAALAAFWFVLFLIEDVLRARRERRPSRGGPR*
soilH2_100464462	3300003324	Sugarcane Root And Bulk Soil	VRALSRRTWFFLVIAVAMLLLYDPTPDQFRWVNLALAGLALFWFVLFTIEDVGHARRLRRHVRGGRR*
Ga0055432_100074813	3300004022	Natural And Restored Wetlands	VNKIARRTWFFLVIVVAMLLLYTPTPAKFRWVNLALAALALFWFILFAIEDLSRARREGRRMGGSR*
Ga0055436_101330962	3300004024	Natural And Restored Wetlands	MRFGRRTWGFLVIAVAMLLLYEPTPEKYRWVNLALAGLALFWFIMFPFEDLGRSRRDQRRLGGGPR*
Ga0055433_101040011	3300004025	Natural And Restored Wetlands	RTWFFLVIVVAMLLLYTPTPAKFRWVNLALAALALFWFILFAIEDLSRARREGRRMGGSR
Ga0063454_1001327812	3300004081	Soil	VRAISRRTWFFLVIVVAMLLLYEPTPEKFRWVNLALAGLSLFWFVLFTIEDVGRARRVRRRVRGGPR*
Ga0062593_1000365763	3300004114	Soil	MRALSRRTWFFLVIAVAMLLLYEPTPETFRWVNLALAGLALFWFVLFTIEDVGRARRVRHRVRGGSR*
Ga0062593_1001614801	3300004114	Soil	MRAISRRTWFFLVIVAAMLLLYDPTPDKFRWVNLALAGLALFWFVLFAIEDVGYARRVRRRVGGNRR*
Ga0062593_1002734112	3300004114	Soil	MLSRRTWFFLVIAIAMLLLYDPTPDKYHWVNLALAGLSLFWFVLFTIEDVGYARRVRRRVRGGPR*
Ga0062593_1005770852	3300004114	Soil	MSLSRRTWFFLVVPVAMLLIYEPTPAALRWVNIALGGLSLFWFVLFAIEDLTRMRRERRRMEGNPR*
Ga0062593_1015260732	3300004114	Soil	MNKLARRTWFFLVIAVAMLLLYDPTPPKFRWVNLALAGLAMFWFILFAIEDLSRARREGRRMGGSR*
Ga0062590_1017702232	3300004157	Soil	VRTLSRRTWFFLVIAIAMLLLYDPTPDKYHWLNLALAGLSLFWFVLFTIEDVGYARRVRRRVRGGPR*
Ga0063356_1001309376	3300004463	Arabidopsis Thaliana Rhizosphere	VNLSRRTLFFLVIPAAMLLLYEPTPASLRWVNVALAALSLFWFVLFSIEDLGRARRERRRMQEGRP*
Ga0063356_1005701423	3300004463	Arabidopsis Thaliana Rhizosphere	MNLSRRTWFFLVIPVVMLLIYEPTPAALRWVNLALAGLSLFWFVLFIIEDVSRARRGRRRMEEGPR*
Ga0062595_1013119521	3300004479	Soil	MRALSRRTWFFLVIVAAMLLLYDPTPEKFRWVNLALAGLALFWFVLFTIEDIGDARRLRRRVRGGRR*
Ga0062595_1016402692	3300004479	Soil	TWFFLVIAVAMLLLYDPTPPKFRWVNLALAGLAMFWFILFAIEDLSRARREGRRMGGSR*
Ga0062594_1001625382	3300005093	Soil	MSLSRRTWFFLVVPVAMLFIYEPTPAALRWVNIALAGLSLFWFVLFAIEDLTRMRRERRRMEGKPR*
Ga0062594_1019221871	3300005093	Soil	RRTWFFLVIAVAMLLLYDPTPAKFRWVNLFLAGLALFWFILFAIEDLSRARRVGRRMGGTR*
Ga0068993_101392841	3300005183	Natural And Restored Wetlands	FLVIAVAMLLLYEPTPEKYRWVNLALAGLALFWFIMFLFEDLGRSRRDQRRLGGGPR*
Ga0068997_100050472	3300005204	Natural And Restored Wetlands	MRLGRRTWGFLVIAVAMLLLYAPTPEKYRWVNLALAGLALFWFILFLLEDLGRARRDQRRLGGGPR*
Ga0070676_109699541	3300005328	Miscanthus Rhizosphere	MRALSRRTWFFLVIAVAMLLLYEPTPESFRWVNLALAGLALFWFVLFTIEDVGRARRVRRRVRGELR*
Ga0070683_1005109433	3300005329	Corn Rhizosphere	AVQGDPMNKLARRTWFFLVIAVAMLLLYDPTPPKFRWVNLALAGLAMFWFILFAIEDLSRARREGRRMGGSR*
Ga0068869_1005119081	3300005334	Miscanthus Rhizosphere	MRALSRRTWFFLVIAVAMLLLYEPTPETFRWVNLALAGLALFWFVLFTIEDVGRARRVRRRVRGELR*
Ga0068869_1007411301	3300005334	Miscanthus Rhizosphere	PPEGTHMRALSRRTWFFLVIAVAMLLLYEPTPETFRWVNLALAGLALFWFVLFTVEDVGRARRVRHRVRGGSR*
Ga0068868_1006964391	3300005338	Miscanthus Rhizosphere	EGTHMRALSRRTWFFLVIAVAMLLLYEPTPETFRWVNLALAGLALFWFVLFTVEDVGRARRVRHRVRGGSR*
Ga0068868_1015266672	3300005338	Miscanthus Rhizosphere	VRTLSRRTWFFLVIAIAMLLLYDPTPDKYHWVNLALAGLSLFWFVLFTIEDVGYARRVRRRVRGGPR*
Ga0070668_1006532742	3300005347	Switchgrass Rhizosphere	MRALSRRTWFFLVIAVAMLLLYEPTPETFRWVNLALAGLALFWFVLFTVEDVGRARRVRHRVRGGSL*
Ga0070669_1008630471	3300005353	Switchgrass Rhizosphere	MRALSRRTWFFLVIAVAMLLLYEPTPETFRWVNLALAGLALFWFVLFTVEDVGRARRVRHRVRGGSR*
Ga0070675_1011121961	3300005354	Miscanthus Rhizosphere	EGTHMRALSRRTWFFLVIAVAMLLLYEPTPESFRWVNLALAGLALFWFVLFTIEDVGRARRVRRRVRGELR*
Ga0070671_1003505921	3300005355	Switchgrass Rhizosphere	RRTWFFLVIAVAMLLLYEPTPESFRWVNLALAGLALFWFVLFTIEDVGRARRVRRRVRGELR*
Ga0070659_1009683652	3300005366	Corn Rhizosphere	TWFFLVIAVAMLLLYEPTPETFRWVNLALAGLALFWFVLFTVEDVGRARRVRHRVRGGSR
Ga0070709_101896852	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MRMLSRRTWFFLVIAIAMLLLYDPTPDKYHWVNLALAGLSLFWFVLFTIEDVGYARRVRRRVRGGPR*
Ga0070710_101564481	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MRMLSRRTWFFLVIAIAMLLLYDPTPDKYHWVNLALAGLSLFWFVLFTIEDVGYARRV
Ga0070700_1010441652	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VRLGRRTWGFLVIAFTMLLLYAPTPSNLRWINLASAALAIVWFCLFALEDLGAARRARRRGGDG*
Ga0070694_1010060902	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MSLSRRTWFFLVVPVAMLFIYERTPAALRWVNIALAGLSLFWFVLFAIEDLTRMRRERRRMEGKPR*
Ga0070678_1003190851	3300005456	Miscanthus Rhizosphere	FLVIAIAMLLLYDPTPDKYHWVNLALAGLSLFWFVLFTIEDVGYARRVRRRVRGGPR*
Ga0070662_1008432601	3300005457	Corn Rhizosphere	MNKLARRTWFFLVIAVAMLLLYDPTPPKFRWVNLALAGLAMFWFILFAIEDLSRARREGRRMGGS
Ga0070695_1002943981	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MRALSRRTWFFLVIAVAMLLLYEPTPETFRWVNLALAGLALFWFVLFTIEDVGRA
Ga0070665_1005967231	3300005548	Switchgrass Rhizosphere	EGTHMRALSRRTWFFLVIAVAMLLLYEPTPETFRWVNLALAGLALFWFVLFTIEDVGRARRVRRRVRGELR*
Ga0070664_1011986892	3300005564	Corn Rhizosphere	MRALSRRTWFFLVIAVAMLLLYEPTPESFRWVNLALAGLALFWFVLFTVEDVGRARRVRHRVRGGSR*
Ga0068861_1011922222	3300005719	Switchgrass Rhizosphere	MRALSRRTWFFLVIAVAMLLLYEPTPESFRWVNLALAGLALFWFVLFTIEDVGRARRVRRRVRGESR*
Ga0068861_1017399211	3300005719	Switchgrass Rhizosphere	MNKIARRTWFFLVIAVAMLLLYDPTPAKFRWVNLFLAGLALFWFILFAIEDLSRARRVGRRMGGTR*
Ga0074470_106569111	3300005836	Sediment (Intertidal)	MNKIARRTWFFLVIVVAMLLLYTPTPAKYRWVNLALAALAMFWFILFAIEDLTRARREGRRMGGSR*
Ga0074470_1114987953	3300005836	Sediment (Intertidal)	MNKIARRTWFFLVIVITMLLLYEPTPAKYRWVNLAMAALAMFWFILFTIEDLSRARRDGRRMGGSR*
Ga0068860_1007530003	3300005843	Switchgrass Rhizosphere	TWFFLVIAVAMLLLYEPTPETFRWVNLALAGLALFWFVLFTIEDVGRARRVRRRVRGELR
Ga0068862_1004543981	3300005844	Switchgrass Rhizosphere	GVRCVPAVQGNPMNKIARRTWFFLVIAVAMLLLYDPTPAKFRWVNLFLAGLALFWFILFAIEDLSRARRVGRRMGGTR*
Ga0070715_100037157	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	RMLSRRTWFFLVIAIAMLLLYDPTPDKYHWVNLALAGLSLFWFVLFTIEDVGYARRVRRRVRGGPR*
Ga0079220_103137532	3300006806	Agricultural Soil	MRSLSRRTWFFLVIAVAMVLLYDPTPEKFRWVNVALAALAMFWFVLFAIEDVGNARRVRRRVRGGRR*
Ga0105245_100233914	3300009098	Miscanthus Rhizosphere	MRALSRRTWFFLVIAVAMLLLYEPTPDKFRWVNLALAGLALFWFVLFTIEDVGRARRVRRRVRGGSR*
Ga0105242_103459502	3300009176	Miscanthus Rhizosphere	MSLSRRTWFFLVVPVAMLFIYEPTPAALRWVNIALAGLSLFWFVLFAIEDLTRMRRERRRLEGKPRCS*
Ga0126311_101643633	3300010045	Serpentine Soil	MRNLGRRTWFFLIVAVAMLLLYAPTPAKFRWVNLALAGLSLFWFVLFMFEDIGRSRRGRRWLQGGSR*
Ga0136847_128847783	3300010391	Freshwater Sediment	MNKISRRTWFFLVIVVALLLLYTPTPAKFRWVNLALAALAMFWFILFAIEDLSRARREGRRMGGSR*
Ga0157284_102567272	3300012893	Soil	MNKLARRTWFFLVIAVAMLLLYDPTPPKFRWVNLALAGLAMFWFILFAIEDLSRSRREGRRMGGSR*
Ga0157286_102604062	3300012908	Soil	LARRTWFFLVIAVAMLLLYDPTPPKFRWVNLALAGLAMFWFILFAIEDLSRARREGRRMGGSR*
Ga0164303_107245972	3300012957	Soil	VRALSRRTWFFLVIAVAMLLLYDPTPDKVQWVNLALAGLALFWFVLFAIEDVGYARRVRRRVRGGRR*
Ga0157380_130506112	3300014326	Switchgrass Rhizosphere	MRALSRRTWFFLVIAVAMLLLYEPTPETFRWVNLALAGLALFWFVLFTIEDVGRARRVRH
Ga0157376_114366172	3300014969	Miscanthus Rhizosphere	MRALSRRTWFFLVIAVAMLLLYEPTPEAFRWVNLALAGLALFWFVLFTIEDVGRARRVRHRVRGGSR*
Ga0173483_102253572	3300015077	Soil	MNMLARRTWFFIVIAVAMLLLYDPTPAKFRWVNLFLAGLAMFWFILFAIEDLSRARRVGRRMGGPR*
Ga0132258_101428247	3300015371	Arabidopsis Rhizosphere	VRTLSRRTWFFLVIAVAMLLLYDPTPETFRWVNLALAGLALFWFVLFTIEDVGRARRVRRRVRGGSR*
Ga0190266_101203412	3300017965	Soil	MNKLARRTWFFLVIAVAMLLLYDPTPPKFRWVNLALAGLALFWFILFAIEDLSRARREGRRMGGSR
Ga0190266_103787131	3300017965	Soil	MNLSRRTWFFLVIPVVMLLIYEPTPASLRWVNLALAGLSLFWFVLFVIEDVSRA
Ga0066667_104698832	3300018433	Grasslands Soil	MRALSRRTWFFLVIVAAMLLLYDPTPDKFRWVNLALAGLALFWFVLFAIEDVGYARRVGRGVRGGRR
Ga0190268_101852462	3300018466	Soil	MNLSRRTWFFLVIPVVMLLIYEPTPASLRWVNLALAGLSLFWFVLFVIEDVSRARRGRRRMEEGPR
Ga0190274_101985682	3300018476	Soil	MNKLARRTWFFLVIAVAMLLLYDPTPPKFRWVNLALAGLALFWFILFAIEDLSRARREGRRMGGHR
Ga0173481_108489852	3300019356	Soil	MSLSRRTWFFLVVPVAMLLIYEPTPAALRWVNIALGGLSLFWFVLFAIEDLTRMRRERRRMEGNPR
Ga0210381_100602082	3300021078	Groundwater Sediment	MNMLARRTWFFLVIAVAMLLLYDPTPAKFRWVNLFLAGLAMFWFILFAIEDLSRARREGRRMGGSR
Ga0182009_100801531	3300021445	Soil	MRALSRRTWFFLVIVAAMLLLYDPTPEKFRWVNLALAGLALFWFVLFTIEDIGDARRLRRRVRGGRR
Ga0182009_101281721	3300021445	Soil	MTFNRRTWGFLAIAIAMVLLLEPTPEKYRWVNLALAGLATFWFVLFLIEDILRARREQRPSRGGSR
Ga0247746_11054621	3300022886	Soil	MNKLARRTWFFLVIAVAMLLLYDPTPPKFRWVNLALAGLAMFWFILFAIEDLSRARREGR
Ga0207423_10085843	3300025535	Natural And Restored Wetlands	PGRLHHRVRYVPTLQGHPVNKIARRTWFFLVIVVAMLLLYTPTPAKFRWVNLALAALALFWFILFAIEDLSRARREGRRMGGSR
Ga0210132_10044402	3300025538	Natural And Restored Wetlands	MRFGRRTWGFLVIAVAMLLLYEPTPEKYRWVNLALAGLALFWFIMFLFEDLGRSRRDQRRLGGGPR
Ga0210138_10757082	3300025580	Natural And Restored Wetlands	VNKIARRTWFFLVIVVAMLLLYTPTPAKFRWVNLALAALALFWFILFAIEDLSRARREGRRMGGSR
Ga0210138_11236091	3300025580	Natural And Restored Wetlands	FLVIAVAMLLLYEPTPEKYRWVNLALAGLALFWFIMFLFEDLGRSRRDQRRLGGGPR
Ga0207710_107579542	3300025900	Switchgrass Rhizosphere	MRALSRRTWFFLVIAVAMLLLYEPTPESFRWVNLALAGLALFWFVLFTIEDVGRARRVRRRVRGELR
Ga0207688_100321523	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MRALSRRTWFFLVIAVAMLLLYEPTPETFRWVNLALAGLALFWFVLFTVEDVGRARRVRHRVRGGSR
Ga0207685_100130182	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MRMLSRRTWFFLVIAIAMLLLYDPTPDKYHWVNLALAGLSLFWFVLFTIEDVGYARRVRRRVRGGPR
Ga0207707_111306382	3300025912	Corn Rhizosphere	TWFFLVIAVAMLLLYEPTPEAFRWVNLALAGLALFWFVLFTVEDVGRARRVRHRVRGGSR
Ga0207660_101930882	3300025917	Corn Rhizosphere	MSLSRRTWFFLVVPVAMLFIYEPTPAALRWVNIALAGLSLFWFVLFAIEDLTRMRRERRRMEGKPR
Ga0207652_111932462	3300025921	Corn Rhizosphere	MRALSRRTWFFLVIAVAMLLLYEPTPETFRWVNLALAGLALFWFVLFTIEDVGRARRVRRRVRGESR
Ga0207687_114486442	3300025927	Miscanthus Rhizosphere	MNKIARRTWFFLVIAVAMLLLYDPTPAKFRWVNLFLAGLALFWFILFAIEDLSRARRVGRRMGGTR
Ga0207706_110377282	3300025933	Corn Rhizosphere	MNKLARRTWFFLVIAVAMLLLYDPTPAKFRWVNLFLAGLALFWFILFAIEDLSRARRVGRRMGGTR
Ga0207669_105883282	3300025937	Miscanthus Rhizosphere	VRLGRRTWGFLVIAFTMLLLYAPTPSNLRWINLASAALAIVWFCLFALEDLGAARRARRRGGDG
Ga0207679_109585432	3300025945	Corn Rhizosphere	MRALSRRTWFFLVIAVAMLLLYEPTPESFRWVNLALAGLALFWFVLFTVEDVGRARRVRHRVRGGSR
Ga0210071_10067192	3300025955	Natural And Restored Wetlands	MRLGRRTWGFLVIAVAMLLLYAPTPEKYRWVNLALAGLALFWFILFLLEDLGRARRDQRRLGGGPR
Ga0207712_107623022	3300025961	Switchgrass Rhizosphere	SRRTWFFLVIAVAMLLLYEPTPDKFRWVNLALAGLALFWFVLFTIEDVGRARRVRRRVRGGSR
Ga0207708_1000070815	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MRALSRRTWFFLVIAVAMLLLYEPTPETFRWVNLALAGLALFWFVLFTIEDVGRARRVRHRVRGGSR
Ga0209152_100164562	3300026325	Soil	MLSRRTWFFLVIAIAMLLLYDPTPATFQWVNVALAALALFWFVLFTIEDVGHARRVRRRVRGGRP
Ga0307316_101192761	3300028755	Soil	MRALSRRTWFFLVIAVAMLLLYEPTPDTFRWVNLALAGLALFWFVLFTIEDVGRARRVRRRVRGGSR
Ga0307320_102023992	3300028771	Soil	WFFLVIPVATLLLYEPTPASLRWVNVAMAGLSLFWFVLFAIEDLGRARRDRRRMRQEER
Ga0307498_104058852	3300031170	Soil	MNKIGRRTWFFLVIAVAMLLLYDPTPAKFRWVNLALAGLALFWFVLFAIEDLSRARREGRRMGGTR
Ga0307498_104565301	3300031170	Soil	MRIFGRRTWGFLLIAIAMLLLYEPTPETYRWVNLALAGLALFWFVLFVCEDVGRWRREQR
Ga0307495_102399872	3300031199	Soil	MNKIARRTWFFLVIAVAMLLLYDPTPPKFRWVNLALAGLALFWFILFAIEDLSRARR
Ga0307506_100299033	3300031366	Soil	MNKIARRTWFFLVIAVAMLLLYDPTPPKFRWVNLALAGLSLFWFILFAIEDLSRARREGRRMGGSR
Ga0307506_101310092	3300031366	Soil	MNKIARRTWFFLVIVVAMLLLYEPTPAKYRWVNLAMAALAMFWFILFAIEDLSRARRDGRRMGGSR
Ga0310887_104911232	3300031547	Soil	MNTIARRTWFFLVIAVAMLLLYDPTPAKFRWVNLFLAGLALFWFILFAIEDLSRARRVGRRMGGTR
Ga0310886_109564791	3300031562	Soil	MNTIARRTWFFLVIAVAMLLLYDPTPAKFRWVNLFLAGLALFWFILFAIEDLSRARR
Ga0310813_118057522	3300031716	Soil	VRTLSRRTWFFLVIAIAMLLLYDPTPDKYHWVNLALAGLSLFWFVLFAIEDVGYARRVRRRVRGGPR
Ga0315290_100576824	3300031834	Sediment	VNKIARRTWFFLVIVVAMLLLYTPTPAKYRWVNLAMAALALFWFILFAIEDLSRARREGRRMGGPR
Ga0310904_105836821	3300031854	Soil	HHGVRCVPAVQGNPMNKIARRTWFFLVIAVAMLLLYDPTPAKFRWVNLFLAGLALFWFILFAIEDLSRARRVGRRMGGTR
Ga0308175_1001058384	3300031938	Soil	MRSLSRRTWFFLVIVVAMLLLYDPTPAKYHWVNVALAGIALFWFVMFAIEDVGYARRVRRHVRRGRR
Ga0214473_114064722	3300031949	Soil	MRLARRTWFFLVIVVAMLLLYAPTPAKYRWVNLALAGLALFWFVLFALEDVGNARRERHRMGGGPR
Ga0310889_106224962	3300032179	Soil	VPAVQGNPMNTIARRTWFFLVIAVAMLLLYDPTPAKFRWVNLFLAGLALFWFILFAIEDLSRARRVGRRMGGTR
Ga0315286_100750082	3300032342	Sediment	VNKIARRTWFFLVIVVAMLLLYTPTPAKYRWVNLAMAALALFWFILFAIEDLSRARRERRRMGGPR
Ga0310810_109509391	3300033412	Soil	MRALSRRTWFFLVIAIAMLLLYEPTPETFRWVNLALAGLALFWFVLFTIEDVGRARRVRHRVRGGSR
Ga0373959_0223914_252_455	3300034820	Rhizosphere Soil	VRTLSRRTWFFLVIAVAMLLLYDPTPETFRWVNLALAGLALFWFVLFTIEDVGRARRVRRRVRGGSR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F085335

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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