NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F085354

Metagenome Family F085354

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F085354
Family Type Metagenome
Number of Sequences 111
Average Sequence Length 76 residues
Representative Sequence MAKRAAEPKPAAPQAEDRFVELMLVAADFVKSCGGLDSAKKALADAGQFIKQAGGVANAEKALGVLENLKDKIG
Number of Associated Samples 82
Number of Associated Scaffolds 111

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 79.28 %
% of genes near scaffold ends (potentially truncated) 26.13 %
% of genes from short scaffolds (< 2000 bps) 88.29 %
Associated GOLD sequencing projects 73
AlphaFold2 3D model prediction Yes
3D model pTM-score0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (53.153 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(9.009 % of family members)
Environment Ontology (ENVO) Unclassified
(28.829 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(50.450 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 53.92%    β-sheet: 0.00%    Coil/Unstructured: 46.08%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.58
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 111 Family Scaffolds
PF02567PhzC-PhzF 12.61
PF00533BRCT 9.01
PF00891Methyltransf_2 4.50
PF13544Obsolete Pfam Family 4.50
PF07963N_methyl 2.70
PF13360PQQ_2 1.80
PF00111Fer2 1.80
PF12826HHH_2 1.80
PF13633Obsolete Pfam Family 1.80
PF00920ILVD_EDD 1.80
PF00072Response_reg 0.90
PF14520HHH_5 0.90
PF00795CN_hydrolase 0.90
PF03795YCII 0.90
PF01954AF2212-like 0.90
PF00353HemolysinCabind 0.90
PF13180PDZ_2 0.90
PF07722Peptidase_C26 0.90
PF00133tRNA-synt_1 0.90
PF00563EAL 0.90
PF03328HpcH_HpaI 0.90
PF03460NIR_SIR_ferr 0.90
PF05343Peptidase_M42 0.90
PF02746MR_MLE_N 0.90
PF00884Sulfatase 0.90
PF00977His_biosynth 0.90
PF07596SBP_bac_10 0.90
PF00543P-II 0.90

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 111 Family Scaffolds
COG0384Predicted epimerase YddE/YHI9, PhzF superfamilyGeneral function prediction only [R] 12.61
COG0129Dihydroxyacid dehydratase/phosphogluconate dehydrataseCarbohydrate transport and metabolism [G] 3.60
COG2165Type II secretory pathway, pseudopilin PulGCell motility [N] 1.80
COG4948L-alanine-DL-glutamate epimerase or related enzyme of enolase superfamilyCell wall/membrane/envelope biogenesis [M] 1.80
COG0060Isoleucyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.90
COG0143Methionyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.90
COG0347Nitrogen regulatory protein PIISignal transduction mechanisms [T] 0.90
COG0469Pyruvate kinaseCarbohydrate transport and metabolism [G] 0.90
COG0495Leucyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.90
COG0525Valyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.90
COG1362Aspartyl aminopeptidaseAmino acid transport and metabolism [E] 0.90
COG1363Putative aminopeptidase FrvXCarbohydrate transport and metabolism [G] 0.90
COG2195Di- or tripeptidaseAmino acid transport and metabolism [E] 0.90
COG2200EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)Signal transduction mechanisms [T] 0.90
COG2301Citrate lyase beta subunitCarbohydrate transport and metabolism [G] 0.90
COG2350YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHisSecondary metabolites biosynthesis, transport and catabolism [Q] 0.90
COG3434c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domainsSignal transduction mechanisms [T] 0.90
COG38362-keto-3-deoxy-L-rhamnonate aldolase RhmACarbohydrate transport and metabolism [G] 0.90
COG4943Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domainsSignal transduction mechanisms [T] 0.90
COG5001Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domainSignal transduction mechanisms [T] 0.90


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms53.15 %
UnclassifiedrootN/A46.85 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2162886013|SwBSRL2_contig_10563479Not Available1017Open in IMG/M
2170459013|GO6OHWN02FZFE9Not Available512Open in IMG/M
3300001213|JGIcombinedJ13530_109367793Not Available593Open in IMG/M
3300002568|C688J35102_120564697All Organisms → cellular organisms → Bacteria1186Open in IMG/M
3300004114|Ga0062593_100138765Not Available1816Open in IMG/M
3300004114|Ga0062593_100227618All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → unclassified Zavarzinella → Zavarzinella sp.1516Open in IMG/M
3300004114|Ga0062593_102869982Not Available550Open in IMG/M
3300004156|Ga0062589_101417269All Organisms → cellular organisms → Bacteria678Open in IMG/M
3300004157|Ga0062590_100090259Not Available1897Open in IMG/M
3300004463|Ga0063356_100663484All Organisms → cellular organisms → Bacteria1425Open in IMG/M
3300004463|Ga0063356_100722892All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula → Pirellula staleyi1374Open in IMG/M
3300004463|Ga0063356_101081081All Organisms → cellular organisms → Bacteria1154Open in IMG/M
3300004463|Ga0063356_102435765All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium801Open in IMG/M
3300004643|Ga0062591_101761882Not Available630Open in IMG/M
3300004643|Ga0062591_102579012All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium535Open in IMG/M
3300005093|Ga0062594_100622833Not Available952Open in IMG/M
3300005177|Ga0066690_10697181Not Available672Open in IMG/M
3300005294|Ga0065705_10206149All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula → Pirellula staleyi1398Open in IMG/M
3300005330|Ga0070690_101173353Not Available611Open in IMG/M
3300005332|Ga0066388_100185342All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula → Pirellula staleyi2693Open in IMG/M
3300005332|Ga0066388_100547005All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae1788Open in IMG/M
3300005332|Ga0066388_100902197All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae1462Open in IMG/M
3300005332|Ga0066388_100941921Not Available1436Open in IMG/M
3300005365|Ga0070688_101693995Not Available517Open in IMG/M
3300005436|Ga0070713_100962832Not Available822Open in IMG/M
3300005455|Ga0070663_101501723Not Available599Open in IMG/M
3300005529|Ga0070741_10243140All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae1719Open in IMG/M
3300005548|Ga0070665_100659546All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → unclassified Zavarzinella → Zavarzinella sp.1059Open in IMG/M
3300005577|Ga0068857_101861670All Organisms → cellular organisms → Bacteria → FCB group589Open in IMG/M
3300005615|Ga0070702_100670977Not Available786Open in IMG/M
3300005713|Ga0066905_100905889All Organisms → cellular organisms → Bacteria772Open in IMG/M
3300005713|Ga0066905_100993198Not Available740Open in IMG/M
3300005713|Ga0066905_101570297All Organisms → cellular organisms → Bacteria601Open in IMG/M
3300005764|Ga0066903_101139602Not Available1442Open in IMG/M
3300005764|Ga0066903_102918130Not Available927Open in IMG/M
3300005841|Ga0068863_100373146All Organisms → cellular organisms → Bacteria1392Open in IMG/M
3300005844|Ga0068862_100701945All Organisms → cellular organisms → Bacteria980Open in IMG/M
3300005844|Ga0068862_101867206All Organisms → cellular organisms → Bacteria610Open in IMG/M
3300006051|Ga0075364_10138132All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes1638Open in IMG/M
3300006804|Ga0079221_10844445Not Available663Open in IMG/M
3300006844|Ga0075428_100017562All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula → Pirellula staleyi7903Open in IMG/M
3300006844|Ga0075428_101686481Not Available661Open in IMG/M
3300006845|Ga0075421_101002750Not Available945Open in IMG/M
3300006854|Ga0075425_101918270Not Available663Open in IMG/M
3300006904|Ga0075424_101430207Not Available734Open in IMG/M
3300007004|Ga0079218_13285762Not Available547Open in IMG/M
3300009012|Ga0066710_102475337Not Available751Open in IMG/M
3300009092|Ga0105250_10624178Not Available501Open in IMG/M
3300009093|Ga0105240_12371769Not Available549Open in IMG/M
3300009098|Ga0105245_12877762Not Available533Open in IMG/M
3300009137|Ga0066709_100218221All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → unclassified Zavarzinella → Zavarzinella sp.2523Open in IMG/M
3300009137|Ga0066709_101546720Not Available954Open in IMG/M
3300009147|Ga0114129_10889519All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Anatilimnocola1129Open in IMG/M
3300009156|Ga0111538_12339678Not Available671Open in IMG/M
3300009162|Ga0075423_10850201All Organisms → cellular organisms → Bacteria966Open in IMG/M
3300009162|Ga0075423_11850475All Organisms → cellular organisms → Bacteria652Open in IMG/M
3300009609|Ga0105347_1178440Not Available844Open in IMG/M
3300009609|Ga0105347_1297059Not Available677Open in IMG/M
3300009610|Ga0105340_1026920All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes2236Open in IMG/M
3300010036|Ga0126305_11297390All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes502Open in IMG/M
3300011416|Ga0137422_1161968Not Available520Open in IMG/M
3300011432|Ga0137428_1041613All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes1197Open in IMG/M
3300011439|Ga0137432_1007496All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula → Pirellula staleyi3028Open in IMG/M
3300011439|Ga0137432_1066072All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Anatilimnocola → Anatilimnocola aggregata1102Open in IMG/M
3300011445|Ga0137427_10025797All Organisms → cellular organisms → Bacteria2311Open in IMG/M
3300012202|Ga0137363_10857587Not Available771Open in IMG/M
3300012212|Ga0150985_110509285All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae1046Open in IMG/M
3300012212|Ga0150985_110809623All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae3496Open in IMG/M
3300012212|Ga0150985_115510089Not Available512Open in IMG/M
3300012212|Ga0150985_118558610Not Available689Open in IMG/M
3300012469|Ga0150984_111517974All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia2186Open in IMG/M
3300012469|Ga0150984_121396087All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium505Open in IMG/M
3300012469|Ga0150984_121700375All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium922Open in IMG/M
3300012469|Ga0150984_122794883Not Available565Open in IMG/M
3300012685|Ga0137397_10091019All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes2227Open in IMG/M
3300012921|Ga0164290_1000184All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula → Pirellula staleyi236350Open in IMG/M
3300012922|Ga0137394_10773637Not Available805Open in IMG/M
3300012923|Ga0137359_10909069Not Available759Open in IMG/M
3300012929|Ga0137404_11206356Not Available696Open in IMG/M
3300012943|Ga0164241_11203973All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes560Open in IMG/M
3300012987|Ga0164307_10522157All Organisms → cellular organisms → Bacteria901Open in IMG/M
3300012988|Ga0164306_11379756Not Available599Open in IMG/M
3300012989|Ga0164305_11889371All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300015371|Ga0132258_10578914All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae2817Open in IMG/M
3300015371|Ga0132258_11270228All Organisms → cellular organisms → Bacteria1861Open in IMG/M
3300015371|Ga0132258_12763727All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes1223Open in IMG/M
3300015371|Ga0132258_13547181Not Available1068Open in IMG/M
3300015373|Ga0132257_101641271All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales823Open in IMG/M
3300015374|Ga0132255_102716677Not Available757Open in IMG/M
3300017540|Ga0180217_1022413All Organisms → cellular organisms → Bacteria3271Open in IMG/M
3300018063|Ga0184637_10300499All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium972Open in IMG/M
3300018083|Ga0184628_10593699All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium561Open in IMG/M
3300018084|Ga0184629_10438978Not Available684Open in IMG/M
3300018422|Ga0190265_13073959Not Available557Open in IMG/M
3300018469|Ga0190270_11611459Not Available701Open in IMG/M
3300018476|Ga0190274_11460058Not Available774Open in IMG/M
3300021082|Ga0210380_10011528All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula → Pirellula staleyi3692Open in IMG/M
3300021082|Ga0210380_10047898All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia1843Open in IMG/M
3300024055|Ga0247794_10123578Not Available789Open in IMG/M
3300026088|Ga0207641_11156024All Organisms → cellular organisms → Bacteria773Open in IMG/M
3300026116|Ga0207674_11212117All Organisms → cellular organisms → Bacteria724Open in IMG/M
3300027513|Ga0208685_1034396All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes1114Open in IMG/M
3300027533|Ga0208185_1080841Not Available768Open in IMG/M
3300027909|Ga0209382_11672666Not Available626Open in IMG/M
3300028379|Ga0268266_10519849All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → unclassified Zavarzinella → Zavarzinella sp.1138Open in IMG/M
3300028380|Ga0268265_10874001All Organisms → cellular organisms → Bacteria881Open in IMG/M
3300031716|Ga0310813_10298073All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae1359Open in IMG/M
3300031716|Ga0310813_11467319Not Available634Open in IMG/M
3300032013|Ga0310906_11076992Not Available581Open in IMG/M
3300034147|Ga0364925_0124023All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes927Open in IMG/M
3300034151|Ga0364935_0024580All Organisms → cellular organisms → Bacteria1654Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil9.01%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere9.01%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil8.11%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil8.11%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil7.21%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere5.41%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.50%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere4.50%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere3.60%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere3.60%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere3.60%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.70%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.70%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.80%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere1.80%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.80%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.80%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.80%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment1.80%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.80%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland0.90%
CompostEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Compost0.90%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.90%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.90%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.90%
Contaminated CultureEnvironmental → Terrestrial → Soil → Unclassified → Desert → Contaminated Culture0.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.90%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.90%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere0.90%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.90%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.90%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.90%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.90%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2162886013Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
2170459013Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis soil at the rocks surface 0-21cmEnvironmentalOpen in IMG/M
3300001213Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)EnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006051Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4Host-AssociatedOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009092Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaGHost-AssociatedOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009609Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890EnvironmentalOpen in IMG/M
3300009610Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700EnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300011416Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT551_2EnvironmentalOpen in IMG/M
3300011432Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2EnvironmentalOpen in IMG/M
3300011439Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2EnvironmentalOpen in IMG/M
3300011445Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2EnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012921Contaminated culture microbial community from soil near Moab, Utah, USA - Microcoleus steenstrupii SON62 (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012943Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)EnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017540Enriched Organic Plus compost microbial communities from Emeryville, California, USA - eDNA 3rd pass 37_C BE-Lig OP (version 2)EnvironmentalOpen in IMG/M
3300018063Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2EnvironmentalOpen in IMG/M
3300018083Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1EnvironmentalOpen in IMG/M
3300018084Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300021082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redoEnvironmentalOpen in IMG/M
3300024055Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6EnvironmentalOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027513Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)EnvironmentalOpen in IMG/M
3300027533Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300034147Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17EnvironmentalOpen in IMG/M
3300034151Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
SwBSRL2_0390.000028102162886013Switchgrass RhizosphereMAKKAPEPKPAVPQQEDKFVELMLVAAEFVKGCGGMQAARKALAETGQFIKSAGGVANAEKALGVLESLKDKIG
N57_008962502170459013Grass SoilMAKRAAESKPASKPASPLAEDRFVELMLVAADFVKSCGGLSEAKKALADAGQFIKQAGGVPNAEKALGVLESLKDKIGA
JGIcombinedJ13530_10936779323300001213WetlandMAKRAAESKPAAPPAEDRFVELMLVAADFVKSCGGLTEAKKALTDAGQFIHHAGSVANAEKAISVLESLR
C688J35102_12056469723300002568SoilMAKRTAAAPQAPQPKAEDRFIELMLVAADFVKNCGGLEQAKKSLADAGQFIHQAGGVSSAEKALHVLESLKEKIGS*
Ga0062593_10013876523300004114SoilMAKRAAVNQANSSGAEERFVELMLVAADFVRNCGGLEPAKKALADAGQFIERAKGVANAEKALEVLENLRERISV*
Ga0062593_10022761833300004114SoilMAKRAAAEPKPAAAPPAEDRFVELMLLAADFAKSCGGLAEAKKALADAGQFIHRAGNVSNAEKALDVLESLREKIG*
Ga0062593_10286998213300004114SoilMAKRAAAAAESKPAVNSNEENFVELMLVAADFVKCCGGLEHAKKSLDDAGQFITKAGGVSKASKALSVLENLKERIG*
Ga0062589_10141726913300004156SoilGLYRTFLINIWEIVMAKRAAESKNAAPPAEDRFVELMLVAADFVRNCGGLSEAKKALADAGSFIQHAGGAANAEKALSVLENLREKIG*
Ga0062590_10009025923300004157SoilMAKRAAVNQANSSGAEERFVELMLVAADFVRNCGGLEPAKKALADAGQFIERAKGVANAEKALGVLENLRERISV*
Ga0063356_10066348423300004463Arabidopsis Thaliana RhizosphereMAKRAAEPKSPPQAEDKFVELMLVAADFVKNCGGLAAAKKALSDAGQFIQQAGGVANADKALGVLESLKDKIGA*
Ga0063356_10072289223300004463Arabidopsis Thaliana RhizosphereMAKKAAEPKPAVPQQEDRFVELMLVAAEFVKSCGGMQPARKALAETGQFIKAAGGVANAERALGVLESLKDKIG*
Ga0063356_10108108123300004463Arabidopsis Thaliana RhizosphereMAKRAAAAAEPKPAANAPEESFVELMLVAADFAKCCGGLEQAKKSLDDAGQFITRAGGVAKASKALSVLENLKERIG*
Ga0063356_10243576523300004463Arabidopsis Thaliana RhizosphereMAKRTAEVKSPPQAEDKFVELMLVAADFVKNCGGLAAAKKSLADAGQFIQQAGGVANADKALGVLESLKDKIGA*
Ga0062591_10176188223300004643SoilMAKKAAEPKLTTPQPEDRFIELMLLAAEFVKCSGGMEQAKRSLSETGQFINSAGSLSNAEKALGVLESLKDRIG*
Ga0062591_10257901213300004643SoilMAKRSVEPKTSAAPAEDRFVELMLVAADFVRNCGGLAEAKKALSDAGSFIDRAGGVNNAEKALSVLENLREKIG*
Ga0062594_10062283313300005093SoilMAKRAAEPKPANPQAEDRFVELMLVAADFVKNCGGLSAAKKSLADAGQFIKQAGGVSNAEKALGVLESLKDKIGA*
Ga0066690_1069718123300005177SoilMAKRAAAQQAPPPKAEDRFIELMLVAADFVRNCGGLEQAKKSLADAGQFIHQAGGVSSAEKALSVLE
Ga0065705_1020614923300005294Switchgrass RhizosphereMAKKAPEPKPAVPQQEDKFVELMLVAAEFVKGCGGMQAARKALAETGQFIKSAGGVANAEKALGVLESLKDKIG*
Ga0070690_10117335313300005330Switchgrass RhizosphereMAKRAAEPKTAAPQPEDKFVELMLVAADFVKNCGGLTEAKKALADAGQFIQQAGGVANAEKALGVLENLKDKIA*
Ga0066388_10018534233300005332Tropical Forest SoilMAKRAAEPKPAAPQAEDRFVELMLVAADFVKSCGGLDSAKKALADAGQFIKQAGGVANAEKALGVLENLKDKIG*
Ga0066388_10054700513300005332Tropical Forest SoilMAKRAAEPKPAHPQAEDRFVELMLVAADFVKSCGGLSEAKKSLADAGQFIKQAGGVPNAEKALGVLESLKDKIGA*
Ga0066388_10090219733300005332Tropical Forest SoilMAKRVATPQPAAAQAEERFVELMLVAADFVKNSGGLEQAKKCLADAGQFIERAKGVSNAEKALSVLENLRDKIGA*
Ga0066388_10094192113300005332Tropical Forest SoilMAKRASANHAPASQPAEERFVELMLIAADFVKNCGGLEPAKKALADAGQFIQRAGGVASAEKALGVLENLRDKIGA*
Ga0070688_10169399523300005365Switchgrass RhizosphereHLPCEIAPLDEPPESIMAKRAAAEPKPAAAPPAEDRFVELMLLAADFAKSCGGLAEAKKALADAGQFIHRAGNVSNAEKALDVLESLREKIG*
Ga0070713_10096283223300005436Corn, Switchgrass And Miscanthus RhizosphereAAPQAPQPKAEDRFVELMLVTADFVKNCGGLEQAKKALADAGQFIHQAGGVSSAEKALNVLESLKEKIGS*
Ga0070663_10150172313300005455Corn RhizosphereMAKRAAEPKPASPQAEDRFVELMLVAADFVKNCGGLSAAKKSLADAGQFIKQAGGVSNAEKALGVLESLKDKI
Ga0070741_1024314033300005529Surface SoilMAKRAAESKPAAKPAGPQAEDRFVELMLVAADFVKNCGGLSEAKKALADAGQFIRQAGGVANAEKALGVLESLKDKIGA*
Ga0070665_10065954613300005548Switchgrass RhizosphereMAKRTAESKPAAPPAEDRFVELMLLAADFAKSCGGLAEAKKALADAGQFIHQAGSVANAEKAISVLENLREKIG*
Ga0068857_10186167023300005577Corn RhizosphereMAKRAGSPQAVPAPNAEDRFVELMLVAADFVKNCGGLEQAQKALADAGQFIERAGSVSSAEKALSVLESLREKIGS*
Ga0070702_10067097713300005615Corn, Switchgrass And Miscanthus RhizospherePQAEDRFVELMLVAADFVKNCGGLSAAKKSLADAGQFIKQAGGVSNAEKALGVLESLKDKIGA*
Ga0066905_10090588923300005713Tropical Forest SoilMAKKVAEPKPAPSQPEDRFVELMLLAAEFVKSAGGLAQAKKSLAEAGQFIKAAGGVASAERALGVLENLKDKIGA*
Ga0066905_10099319813300005713Tropical Forest SoilMAKRAAATQTAAPQPAEERFVELMLVAADFVKNCGGLEPAKKALADAGQFIHRAGGVASAEKALGVLENLRDKIGA*
Ga0066905_10157029713300005713Tropical Forest SoilAKRAAEPKPPAPQAEDRFVELMLVAADFVKSCGGLDAAKKSLVDAGQFIKQAGGVSNAEKALGVLENLKDKIG*
Ga0066903_10113960223300005764Tropical Forest SoilMAKRAAGSHDSNDAEQRFVELMLAAADYVNSCGGLEQAKKSLADAGQFIELAKGVASAEKALGVLESLREKIGA*
Ga0066903_10291813023300005764Tropical Forest SoilMAKRAAEPKPANPQAEDRFVELMLVAADFVKSCGGLSEAKKSLADAGQFIKQAGGVPNAEKALGVLESLKDKIGA*
Ga0068863_10037314623300005841Switchgrass RhizosphereMAKRAAEPKPTASQPEDKFVELMLVAADFAKSCGGLEAAKKSLSDTGLFIKQAGGVPNAERALRVLEDLKGKIG*
Ga0068862_10070194523300005844Switchgrass RhizosphereMAKRAAEPKPAAPQAEDRFVELMLVAADFVKSCGSLNTAKKSLADAGQFIKHAGGVANAEKALGVLENLKDKIG*
Ga0068862_10186720623300005844Switchgrass RhizosphereMAKRAAEPKPTASQPEDKFVELMLVAADFAKSCGGLEAAKKSLSDTGLFIKQAGGVPNAERALRVLEDLKGK
Ga0075364_1013813243300006051Populus EndosphereMAKRAAAEPKHAAAPPAEDRFVELMLLAADFAKSCGGLAEAKKALADAGQFIHRAGNVSNAEKALDVLESLREKIG*
Ga0079221_1084444523300006804Agricultural SoilMAKRAAEPKPANPQAEDRFVELMLVAADFVKNCGGLEQAKKSLADAGQFIHQAGGVSSAEKALNVLESLKEKIGS*
Ga0075428_10001756283300006844Populus RhizosphereMAKKAAAEPKPAASQPEDRFVELMLLAAEFVRSAGGLSQAKKSLAEAGQFIKAAGGVPSAERALGVLESLKDKIGS*
Ga0075428_10168648113300006844Populus RhizosphereMAKRAIPETKTASLPPEEKFVELMLVAADFVKSCGSLDQAKKALSDAGSFIQQAGSVSNAGRALNVLESLRERIG*
Ga0075421_10100275023300006845Populus RhizosphereMAKRAIPETKPASLPPEEKFVELMLVAADFVKSCGSLDQAKKALSDAGSFIQQAGSVSNAGRALNVLESLRERIG*
Ga0075425_10191827013300006854Populus RhizosphereMAKRAAESKPSVPQPEDKFVALMLVAADFVKDCGGLEQAKKALADAGQFIQHAGGVSNANKALSVLESLKDKIG*
Ga0075424_10143020713300006904Populus RhizosphereMAKRAAEPKTAAPQPEDKFVELMLVAADFVKNCGGLTEAKKSLADAGQFIQQAGGVANAEKALG
Ga0079218_1328576223300007004Agricultural SoilSSTLHLLLELPMAKRAAEMKSTGRSSEEKPPEEKFIELMLVAADFVKSCGSLDQAKKSLTDAGNFIQQAGSAASAERALSVLESLKEKIG*
Ga0066710_10247533723300009012Grasslands SoilMAKRAAEPKPASSQPEDRFVELMLVAADFVKNCGSLAEAKKALADAGQFIKQAGGVANAEKALGVLESLKDKIGA
Ga0105250_1062417813300009092Switchgrass RhizosphereAEDRFVELMLVAADFVKSCGSLNTAKKSLADAGQFIKHAGGVANAEKALGVLENLKDKIG
Ga0105240_1237176913300009093Corn RhizosphereMMAKKAAADAKPAAPQPETAFVDLMLVAADFVRSSGGVEQARKALEEAGKFIDRAGNVAKASKAIDVLASLREKIEGQLVPLLLALL
Ga0105245_1287776213300009098Miscanthus RhizosphereLINIREIVMAKRAAESKTSVPPAEDRFVELMLVAADFVKNCGSLAEAKKALADAGSFIQHAGGTANAEKALSVLESLREKIG*
Ga0066709_10021822143300009137Grasslands SoilMAKRAAEPKPASSQPEDRFVELMLVAADFVKNCGSLAEAKKALADAGQFIKQAGGVANAEKALGVLESLKDKIGA*
Ga0066709_10154672023300009137Grasslands SoilMAKRAVPVPHDSHQAEERFVELMLVAADFVKNCGGLEQARKSLADAGQFIERAKGVSNAEKALSVLENLRDKIGA*
Ga0114129_1088951913300009147Populus RhizosphereAAAEPKPAASQPEDRFVELMLLAAEFVRSAGGLSQAKKSLAEAGQFIKAAGGVPSAERALGVLESLKDKIGS*
Ga0111538_1233967823300009156Populus RhizosphereMAKRAAEPKPVTQAPEEKFVELMLVAADFVRSSGSLEQAKKALTDAGNFIRQAGSVGNAERALGVLESLKEKIG*
Ga0075423_1085020123300009162Populus RhizosphereMAKRIAAPPASPPAEERFVELMLVAADFVKSCGGLEHAKKSLADAGQFIERANGVANAEKALSVLENLREKIGA*
Ga0075423_1185047523300009162Populus RhizosphereMAKRAPEPKPVTSQPEDKFVELMLVAADFVQSCGGLAQAKKAVADAGQFIKQAGGVANAEKALGVLENLKEKIGS*
Ga0105347_117844023300009609SoilMAKRTTESKPANSQPEDKFVELMLVAADFVQSCGGLSQAKKAVAEAGQFIKQAGGIPNAERALSVLENLKDKIGS*
Ga0105347_129705923300009609SoilMAKRAAEPKSPPQAEDKFVELMLVAADFVKNCGGLAAAKKALADAGQFIQQAGGVANAGKALGVLESLKDKIGA*
Ga0105340_102692023300009610SoilMAKRASESKPATQAPEDKFVELMLVAADFIKTCGSLDQAKKSLIDAGTFIQRAGGVANAERALGVLESLKEKIG*
Ga0126305_1129739013300010036Serpentine SoilMAKRAAPAAESKPAVNAPEENFVELMLVAADFVKCCGGLGQAKKSLDDAGQFITKAGGVAKATK
Ga0137422_116196813300011416SoilMAKRAAEPKSPPQAEDKFVELMLVAADFVKNCGGLAAAKKALADAGQFIQQAGGVANAGKALGVLESLK
Ga0137428_104161323300011432SoilLPLEFTPFSADWEIIMAKRAAAEPKTAPPQAEDKFVELMLVAADFVKNCGGLAEAKKSLEDAGQFIQRAGGVANANKALGVLENLKDKIG*
Ga0137432_100749613300011439SoilMAKRAAESKSPPQAEDKFVELMLVAADFVKNCGGLAAAKKALADAGQFIQQAGGVANAGKALGVLESLKDKIGA*
Ga0137432_106607223300011439SoilMAKKAAEPKPAAPQQEDRFVELMLVAAEFVKSCGGMTQARKALAETGQFIKAAGGVPSAEKALTVLESLKDKIG*
Ga0137427_1002579733300011445SoilMAKRAAAEPKTAPPQAEDKFVELMLVAADFVKNCGGLAEAKKSLEDAGQFIQRAGGVANANKALGVLENLKDKIG*
Ga0137363_1085758723300012202Vadose Zone SoilMAKRAAAAPQVTQLKAEDRFVELMLVAADFVKNCGGLEQAKKALADAGQFIQQAGGVANAEKALSVLESLKEKIGG*
Ga0150985_11050928513300012212Avena Fatua RhizosphereQHHSDQHPGDFSMAKRSSESKPSAPPAEDRFVELMLVAADFVKNCGGLAEAKKSLSDAGSFIDRAGGVGNAEKALSVLENLREKIG*
Ga0150985_11080962323300012212Avena Fatua RhizosphereMAKRTTESKPAVPAAEDRFVELMLVAADFVKNCGGLSEAKKALADAGQFIDRAGGVSNAEKALGVLESLKDKIG*
Ga0150985_11551008923300012212Avena Fatua RhizosphereMAKRASAESKPASHAPEENFVELMLVAADFVRNCGGLQQAKKSLDDAGQFIDRAGGVAKASKALNVLESLKDRIGT*
Ga0150985_11855861033300012212Avena Fatua RhizosphereDSVVVFLGAFPMAKRTAESKPAAPPAEDRFVELMLVAADFVKSCGGLTEAKKALTDAGQFIHHAGSVANAEKAISVLESLREKIG*
Ga0150984_11151797433300012469Avena Fatua RhizosphereMAKRAAAAAESKPAVNAPEENFVELMLVAADFVKCCGGLEHAKKSLDDAGQFITKAGGVSKASKALSVLENLKERIG*
Ga0150984_12139608723300012469Avena Fatua RhizosphereSISVSDSYRTLLINIREIVMAKRAAESKNSAPPAEDRFVELMLMAADFVKNCGGLTEARKALADAGSFIQHAGGSANAEKALTVLENLREKIG*
Ga0150984_12170037523300012469Avena Fatua RhizosphereMAKRAAAESKPASHAPEESFVELMLVAADFVRNCGGLQQAKKSLDDAGQFIDRAGGVAKASKALNVLESLKDRIGT*
Ga0150984_12279488323300012469Avena Fatua RhizosphereAPLTITGVDDMAKRTAEPKPATPPAEDRFVELMLLAADFAKSCGGLTEAKKALADAGQFIHQAGSVANAEKAIGVLESLREKIG*
Ga0137397_1009101933300012685Vadose Zone SoilMAKRAAALPDSNHAEERFVELMLVAADFVKNSGGLEQAKKSLADAGQFIERAKGVGNAERALSVLENLREKIGA*
Ga0164290_1000184303300012921Contaminated CultureMAKKLAEPKPAAPAPPKPEERFVELMLVAADFVQSCGGLEPAKKALADAGKFVESAGGVGNATRALEVLENLKEKIGS*
Ga0137394_1077363723300012922Vadose Zone SoilMAKRAAALPDSNHAEERFVELMLVAADFVKNSGGLEQAKKSLADAGQFIERAKGVGNAEKALSVLENLREKIGA*
Ga0137359_1090906923300012923Vadose Zone SoilMAKRAAEPKSAAPKPNAPAAEDRFVELMLVAADFVKNCGGLTEAKKALADAGQFIGRAGGVSNAEKALGVLENLKDKIG*
Ga0137404_1120635623300012929Vadose Zone SoilMAKRVAAQPKPAAPPAAEDRFVELMLVAADFVKNCGGLAAAKKSLADAGQFIQRAGGVANANKALSVLENLKDKIGG*
Ga0164241_1120397313300012943SoilMAKRAAAAESKPAVNAPDESFVELMLVAADFVKCCGGLEPAKKSLDDAGQFITKAGGVSKASKALSVLENLKERIG
Ga0164307_1052215723300012987SoilMLEIHMAKRAAEPKPAPSQAEDRFVELMLVAADFVKNCGGLSEAKKSLADAGQFIKQAGGVTNAEKALGVLESLKDKIGA*
Ga0164306_1137975623300012988SoilFPGAFLMAKRAAETKPAAAPPAEDRFVELMLVAADFVKSCGGLTEAKKALTDAGEFIHHAGSVANAEKAIRVLESLREKIG*
Ga0164305_1188937113300012989SoilMAKRAAESKTSVPPAEDRFVELMLVAADFVKNCGSLAEAKKALADAGSFIQHAGGTANAEKALSVLESLREKIG*
Ga0132258_1057891423300015371Arabidopsis RhizosphereMAKRAVAESKSSAPPAEDRFVALMLVAADFVKNCGGLSEAKKALADAGAFIQHAGGPANAEKALSVLENLREKIG*
Ga0132258_1127022833300015371Arabidopsis RhizosphereMAKRAAAAAAESKPAANAPEENFVELMLVAADFVKCCGGLEQAKKSLDDAGQFITRAGGVAKASKALSVLESLKERIG*
Ga0132258_1276372723300015371Arabidopsis RhizosphereMAKRASESKSPALQAEDRFIELMQVTADFVRNCGGLPEARKALADAGQFIDRAGGIPNAEKALGVLENLKEKLGT*
Ga0132258_1354718113300015371Arabidopsis RhizosphereMAKRAAESKPAAKPAGPQAEDRFVELMLVAADFVKSCGGLSEAKKALADAGQFIKQAGGVPNAEKALGVLESLKDKIGA*
Ga0132257_10164127113300015373Arabidopsis RhizosphereMAKRAAAAETKSAPQPEENFVELMLVAADFVKSCGGLEQAKKALEDAGQFIDRAGGVAKASKALGVLESLKDRIG*
Ga0132255_10271667723300015374Arabidopsis RhizosphereMAKRTAAAPQPAQPKAEDRFVELMLVAADFVKNCGGLEPAKKALADAGQFIHQAGGVANAEKALNVLESLKEKIA*
Ga0180217_102241333300017540CompostMAKKLAATSPAPSQPKPEERFVELMLVAADFVQSCGGLEPAKKALADAGKFVESAGSVESATRALEVLESLKQKIGT
Ga0184637_1030049923300018063Groundwater SedimentMAKRAPESKPATQAPEEKFVELMLVAADFIKTCGSLEQAKKSLTDAGNFIQQAGGVTNAARALGVLENLKEKIG
Ga0184628_1059369913300018083Groundwater SedimentKKAAEPKPAAAPQPEDKFVELMLDAAEFVKSCGGMQPARKALAETGQFIKAAGGVASAERALTVLESLKDKIG
Ga0184629_1043897823300018084Groundwater SedimentMAKRASEPKPSAPQPEDKFVELMLVAADFVQSCGGLSQAKKAVAEAGQFIKQAGGIPNAERALSVLENLKDKIGS
Ga0190265_1307395923300018422SoilMAKRTLEPKAPKAVPAPTSEDRFVELMIVGADFVKSCGGLEQAKKALADAGQFIGQAGGVKNAEKALGVLENLREKIGG
Ga0190270_1161145923300018469SoilMAKRTSEPKAPKAAPAPAAEDRFVELMIVAADFVKNCGGLEQGKKSLASAGQFIRQAGGVTNAEKALGVLENLKGKIG
Ga0190274_1146005823300018476SoilMAKKAAAESKAAPPQAEDKYVDLMLVAADYVKSCGGAEQAQKSLSAAGQFIARAGGVDQASKALSVLENLRERIGG
Ga0210380_1001152843300021082Groundwater SedimentMAKKAAEPKPAAAPQPEDKFVELMLDAAEFVKSCGGMQPARKALAETGQFIKAAGGVASAERALTVLESLKDKIG
Ga0210380_1004789823300021082Groundwater SedimentMAKRAPESKSPPQAEDKFVELMLVAADFVKNCGGLAAAKKSLADAGQFIQQAGGVANAGKALGVLESLKDKIGA
Ga0247794_1012357823300024055SoilMAKKAAEPKPAASQPEDRFVELMLLAAEFVKCCGSLEQAKRSLAETGLFIKTAGGIANAEKALSVLESLKDKIG
Ga0207641_1115602423300026088Switchgrass RhizosphereMAKRAAEPKPTASQPEDKFVELMLVAADFAKSCGGLEAAKKSLSDTGLFIKQAGGVPNAERALRVLEDLKGKIG
Ga0207674_1121211723300026116Corn RhizosphereRAASPQAVPAPNAEDRFVELMLVAADFVKNCGGLEQAQKALADAGQFIERAGSVSSAEKALSVLESLREKIGS
Ga0208685_103439623300027513SoilMAKRTTESKPANSQPEDKFVELMLVAADFVQSCGGLSQAKKAVAEAGQFIKQAGGIPNAERALSVLENLKDKIGS
Ga0208185_108084113300027533SoilMAKRASESKPATQAPEDKFVELMLVAADFIKTCGSLDQAKKSLIDAGTFIQRAGGVANAERALGVLESLKEKIG
Ga0209382_1167266613300027909Populus RhizosphereMAKRAPESKPASQPPEEKFIELMLVAADFVKNCGSLEQAKKALGDAGDFIKHAGSVANAERALGVLENLKERIG
Ga0268266_1051984923300028379Switchgrass RhizosphereMAKRTAESKPAAPPAEDRFVELMLLAADFAKSCGGLAEAKKALADAGQFIHQAGSVANAEKAISVLENLREKIG
Ga0268265_1087400113300028380Switchgrass RhizosphereMAKRAAEPKPAAPQAEDRFVELMLVAADFVKSCGSLNTAKKSLADAGQFIKHAGGVANAEKALGVLE
Ga0310813_1029807323300031716SoilMAKRAAEPKPANPQAEDRFVELMLVAADFVKNCGGLSEAKKALADAGQFIKQAGGVSNAEKALGVLESLKDKIGA
Ga0310813_1146731923300031716SoilMAKRTAESKTSPAPAEDRFVELMLVAADFVKSCGGLSEAKKALADAGSFIHRAGNVANAEKALSVLENLREKIG
Ga0310906_1107699213300032013SoilMAKRAAAEPKPAAAPPAEDRFVELMLLAADFAKSCGGLAEAKKALSDAGQFIHRAGNVSNAEKALDVLESLREKIG
Ga0364925_0124023_596_8683300034147SedimentLPLEFTPFSADWEIIMAKRAAAEPKTAPPQAEDKFVELMLVAADFVKNCGGLAEAKKSLEDAGQFIQRAGGVANANKALGVLENLKDKIG
Ga0364935_0024580_8_2353300034151SedimentMAKRAAAEPKTAPPQAEDKFVELMLVAADFVKNCGGLAEAKKSLEDAGQFIQRAGGVANANKALGVLENLKDKIG


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.