Metagenome / Metatranscriptome Family F085356

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085356
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	73 residues
Representative Sequence	VAGARVLHWNGKDIPEELRELPAGTYVVEAVDSAPALTPDEDQGLAEALASLRAGEGRTVEQVRQTIDSILRR
Number of Associated Samples	103
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	28.83 %
% of genes near scaffold ends (potentially truncated)	18.92 %
% of genes from short scaffolds (< 2000 bps)	76.58 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.396 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (12.613 % of family members)
Environment Ontology (ENVO)	Unclassified (33.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (23.423 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.69% β-sheet: 11.88% Coil/Unstructured: 57.43%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF05016	ParE_toxin	36.04
PF00069	Pkinase	3.60
PF00144	Beta-lactamase	1.80
PF13091	PLDc_2	0.90
PF05117	DUF695	0.90
PF00873	ACR_tran	0.90
PF13857	Ank_5	0.90
PF00581	Rhodanese	0.90
PF12680	SnoaL_2	0.90
PF14076	DUF4258	0.90
PF05717	TnpB_IS66	0.90
PF00383	dCMP_cyt_deam_1	0.90
PF13699	DUF4157	0.90
PF04542	Sigma70_r2	0.90
PF03050	DDE_Tnp_IS66	0.90
PF13545	HTH_Crp_2	0.90
PF13948	DUF4215	0.90
PF01180	DHO_dh	0.90
PF00848	Ring_hydroxyl_A	0.90
PF00012	HSP70	0.90
PF12728	HTH_17	0.90
PF01926	MMR_HSR1	0.90
PF14238	DUF4340	0.90
PF13599	Pentapeptide_4	0.90
PF06452	CBM9_1	0.90
PF08241	Methyltransf_11	0.90
PF12395	DUF3658	0.90
PF03466	LysR_substrate	0.90
PF05685	Uma2	0.90
PF13817	DDE_Tnp_IS66_C	0.90
PF00561	Abhydrolase_1	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	14.41
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.80
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.80
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.80
COG3436	Transposase	Mobilome: prophages, transposons [X]	1.80
COG4638	Phenylpropionate dioxygenase or related ring-hydroxylating dioxygenase, large terminal subunit	Inorganic ion transport and metabolism [P]	1.80
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	0.90
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.90
COG0167	Dihydroorotate dehydrogenase	Nucleotide transport and metabolism [F]	0.90
COG0443	Molecular chaperone DnaK (HSP70)	Posttranslational modification, protein turnover, chaperones [O]	0.90
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.90
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.90
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.90
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.90
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	0.90
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	0.90
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.40 %
Unclassified	root	N/A	3.60 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.40 %
Unclassified	root	N/A	3.60 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.40 %
Unclassified	root	N/A	3.60 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	63.06 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	20.72 %
Unclassified	root	N/A	3.60 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	54.05 %
Unclassified	root	N/A	3.60 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	54.05 %
Unclassified	root	N/A	3.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	38.74 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3.60 %
Unclassified	root	N/A	3.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	38.74 %
Unclassified	root	N/A	3.60 %
Nannocystineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae	1.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.80 %
Myxococcales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Myxococcales incertae sedis	0.90 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	38.74 %
Unclassified	root	N/A	3.60 %
Kofleriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae	1.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.80 %
Sandaracinaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae	0.90 %
Enhygromyxa	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Myxococcales incertae sedis → Enhygromyxa	0.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	38.74 %
Unclassified	root	N/A	3.60 %
unclassified Kofleriaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae	1.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.80 %
Sandaracinus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus	0.90 %
Enhygromyxa salina	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Myxococcales incertae sedis → Enhygromyxa → Enhygromyxa salina	0.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	38.74 %
Unclassified	root	N/A	3.60 %
Kofleriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae → Kofleriaceae bacterium	1.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.80 %
unclassified Sandaracinus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus → unclassified Sandaracinus	0.90 %
Enhygromyxa salina	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Myxococcales incertae sedis → Enhygromyxa → Enhygromyxa salina	0.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	38.74 %
Unclassified	root	N/A	3.60 %
Kofleriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae → Kofleriaceae bacterium	1.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.80 %
Sandaracinus sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus → unclassified Sandaracinus → Sandaracinus sp.	0.90 %
Enhygromyxa salina	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Myxococcales incertae sedis → Enhygromyxa → Enhygromyxa salina	0.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459012\|GOYVCMS01EPZFX	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	505	Open in IMG/M
2170459019\|G14TP7Y02GNXMK	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
2228664021\|ICCgaii200_c0461817	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	575	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0805272	All Organisms → cellular organisms → Bacteria → Acidobacteria	2123	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_11371512	All Organisms → cellular organisms → Bacteria	4181	Open in IMG/M
3300003993\|Ga0055468_10140470	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	712	Open in IMG/M
3300004463\|Ga0063356_101192043	All Organisms → cellular organisms → Bacteria → Acidobacteria	1105	Open in IMG/M
3300004798\|Ga0058859_11049026	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300005334\|Ga0068869_100981661	All Organisms → cellular organisms → Bacteria → Acidobacteria	734	Open in IMG/M
3300005347\|Ga0070668_100492799	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300005444\|Ga0070694_100887265	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	735	Open in IMG/M
3300005471\|Ga0070698_101430950	All Organisms → cellular organisms → Bacteria → Acidobacteria	642	Open in IMG/M
3300005530\|Ga0070679_102174059	All Organisms → cellular organisms → Bacteria → Acidobacteria	504	Open in IMG/M
3300005987\|Ga0075158_10271072	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300006041\|Ga0075023_100268270	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	689	Open in IMG/M
3300006056\|Ga0075163_10072680	All Organisms → cellular organisms → Bacteria → Proteobacteria	4182	Open in IMG/M
3300006092\|Ga0082021_1009541	All Organisms → cellular organisms → Bacteria → Proteobacteria	1092	Open in IMG/M
3300006804\|Ga0079221_10420388	All Organisms → cellular organisms → Bacteria → Acidobacteria	836	Open in IMG/M
3300007076\|Ga0075435_100454127	Not Available	1105	Open in IMG/M
3300007521\|Ga0105044_10101604	All Organisms → cellular organisms → Bacteria	3223	Open in IMG/M
3300009032\|Ga0105048_10182541	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2554	Open in IMG/M
3300009095\|Ga0079224_103282736	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	644	Open in IMG/M
3300009120\|Ga0117941_1025717	All Organisms → cellular organisms → Bacteria → Acidobacteria	1552	Open in IMG/M
3300009156\|Ga0111538_10265773	All Organisms → cellular organisms → Bacteria → Proteobacteria	2171	Open in IMG/M
3300009167\|Ga0113563_10386970	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1487	Open in IMG/M
3300009551\|Ga0105238_12853521	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	519	Open in IMG/M
3300009686\|Ga0123338_10002209	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae → Kofleriaceae bacterium	18273	Open in IMG/M
3300009686\|Ga0123338_10356028	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	627	Open in IMG/M
3300009774\|Ga0123339_10338499	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	655	Open in IMG/M
3300010331\|Ga0123336_10053208	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2579	Open in IMG/M
3300010362\|Ga0126377_11227212	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	821	Open in IMG/M
3300010371\|Ga0134125_11987537	All Organisms → cellular organisms → Bacteria → Acidobacteria	632	Open in IMG/M
3300010401\|Ga0134121_10006437	All Organisms → cellular organisms → Bacteria → Proteobacteria	9486	Open in IMG/M
3300011414\|Ga0137442_1107255	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	610	Open in IMG/M
3300011428\|Ga0137456_1020534	All Organisms → cellular organisms → Bacteria → Acidobacteria	1406	Open in IMG/M
3300011438\|Ga0137451_1028512	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1615	Open in IMG/M
3300011442\|Ga0137437_1244923	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	620	Open in IMG/M
3300012040\|Ga0137461_1067631	All Organisms → cellular organisms → Bacteria → Acidobacteria	992	Open in IMG/M
3300012228\|Ga0137459_1000179	All Organisms → cellular organisms → Bacteria	23226	Open in IMG/M
3300012360\|Ga0137375_10829860	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	741	Open in IMG/M
3300012469\|Ga0150984_104195101	Not Available	1668	Open in IMG/M
3300012910\|Ga0157308_10243292	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300012929\|Ga0137404_12141230	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300012944\|Ga0137410_12105800	Not Available	503	Open in IMG/M
3300012964\|Ga0153916_12268124	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	610	Open in IMG/M
3300012964\|Ga0153916_12802617	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	550	Open in IMG/M
3300013307\|Ga0157372_11100602	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	919	Open in IMG/M
3300014502\|Ga0182021_10829407	All Organisms → cellular organisms → Bacteria → Acidobacteria	1111	Open in IMG/M
3300015194\|Ga0167666_1027770	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1508	Open in IMG/M
3300015198\|Ga0167625_1109240	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	669	Open in IMG/M
3300015360\|Ga0163144_11718164	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	536	Open in IMG/M
3300015370\|Ga0180009_10002275	All Organisms → cellular organisms → Bacteria	22666	Open in IMG/M
3300015371\|Ga0132258_11909923	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1495	Open in IMG/M
3300015372\|Ga0132256_103374790	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	537	Open in IMG/M
3300015374\|Ga0132255_103469293	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	671	Open in IMG/M
3300017973\|Ga0187780_10478085	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	888	Open in IMG/M
3300018422\|Ga0190265_11244696	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	862	Open in IMG/M
3300018469\|Ga0190270_12337015	Not Available	596	Open in IMG/M
3300019362\|Ga0173479_10292462	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	738	Open in IMG/M
3300019377\|Ga0190264_10745834	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	733	Open in IMG/M
3300019874\|Ga0193744_1001221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4694	Open in IMG/M
3300019886\|Ga0193727_1025955	All Organisms → cellular organisms → Bacteria → Acidobacteria	2046	Open in IMG/M
3300020021\|Ga0193726_1192134	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300020596\|Ga0163149_10171252	All Organisms → cellular organisms → Bacteria → Acidobacteria	1399	Open in IMG/M
3300021082\|Ga0210380_10518333	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	546	Open in IMG/M
3300021090\|Ga0210377_10163345	All Organisms → cellular organisms → Bacteria	1443	Open in IMG/M
3300021339\|Ga0193706_1053379	All Organisms → cellular organisms → Bacteria → Acidobacteria	1131	Open in IMG/M
3300021408\|Ga0193708_1000180	All Organisms → cellular organisms → Bacteria → Proteobacteria	13635	Open in IMG/M
3300022561\|Ga0212090_10005941	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae → Kofleriaceae bacterium	19697	Open in IMG/M
3300022561\|Ga0212090_10531732	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	795	Open in IMG/M
3300022886\|Ga0247746_1002348	All Organisms → cellular organisms → Bacteria	3351	Open in IMG/M
3300022915\|Ga0247790_10000023	All Organisms → cellular organisms → Bacteria	79091	Open in IMG/M
3300025140\|Ga0209724_1108392	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1076	Open in IMG/M
3300025324\|Ga0209640_11300682	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	539	Open in IMG/M
3300025877\|Ga0208460_10133710	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300025936\|Ga0207670_10029623	All Organisms → cellular organisms → Bacteria → Proteobacteria	3489	Open in IMG/M
3300025942\|Ga0207689_11661254	All Organisms → cellular organisms → Bacteria → Acidobacteria	530	Open in IMG/M
3300025961\|Ga0207712_11136881	All Organisms → cellular organisms → Bacteria → Acidobacteria	696	Open in IMG/M
3300025972\|Ga0207668_10491780	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1054	Open in IMG/M
3300026983\|Ga0207856_1000358	All Organisms → cellular organisms → Bacteria → Proteobacteria	9668	Open in IMG/M
3300027811\|Ga0256868_10431698	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	527	Open in IMG/M
3300027850\|Ga0209591_10704954	All Organisms → cellular organisms → Bacteria → Acidobacteria	604	Open in IMG/M
3300027878\|Ga0209181_10556058	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus → unclassified Sandaracinus → Sandaracinus sp.	865	Open in IMG/M
3300027886\|Ga0209486_10499739	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	756	Open in IMG/M
3300028381\|Ga0268264_11351476	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300028590\|Ga0247823_10049659	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3228	Open in IMG/M
3300028809\|Ga0247824_10036905	All Organisms → cellular organisms → Bacteria → Proteobacteria	2539	Open in IMG/M
3300030613\|Ga0299915_10000400	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	33049	Open in IMG/M
3300031456\|Ga0307513_11086600	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	512	Open in IMG/M
3300031507\|Ga0307509_10228841	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1664	Open in IMG/M
3300031507\|Ga0307509_10587885	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	787	Open in IMG/M
3300031547\|Ga0310887_11012391	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	530	Open in IMG/M
3300031576\|Ga0247727_10107463	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2889	Open in IMG/M
3300031731\|Ga0307405_10193867	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1470	Open in IMG/M
3300031901\|Ga0307406_10829396	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Myxococcales incertae sedis → Enhygromyxa → Enhygromyxa salina	782	Open in IMG/M
3300031938\|Ga0308175_100000067	All Organisms → cellular organisms → Bacteria → Proteobacteria	85469	Open in IMG/M
3300031949\|Ga0214473_10661766	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1144	Open in IMG/M
3300031949\|Ga0214473_11145124	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	810	Open in IMG/M
3300031965\|Ga0326597_10855949	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	936	Open in IMG/M
3300032002\|Ga0307416_100586208	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1193	Open in IMG/M
3300032059\|Ga0318533_10931911	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	637	Open in IMG/M
3300032074\|Ga0308173_11983255	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	549	Open in IMG/M
3300032126\|Ga0307415_100121981	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1956	Open in IMG/M
3300032126\|Ga0307415_100852127	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	836	Open in IMG/M
3300032157\|Ga0315912_10059483	All Organisms → cellular organisms → Bacteria → Acidobacteria	3015	Open in IMG/M
3300033419\|Ga0316601_100280099	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1515	Open in IMG/M
3300033419\|Ga0316601_101592452	All Organisms → cellular organisms → Bacteria → Acidobacteria	658	Open in IMG/M
3300033419\|Ga0316601_102517826	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	517	Open in IMG/M
3300033433\|Ga0326726_10657217	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1010	Open in IMG/M
3300033513\|Ga0316628_100142827	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2785	Open in IMG/M
3300034170\|Ga0370487_0054917	All Organisms → cellular organisms → Bacteria → Acidobacteria	1233	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.87%
Host-Associated	Host-Associated	21.62%
Engineered	Engineered	4.50%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	48.65%
Aquatic	Environmental → Aquatic	25.23%
Plants	Host-Associated → Plants	20.72%
Wastewater	Engineered → Wastewater	3.60%
Human	Host-Associated → Human	0.90%
Solid Waste	Engineered → Solid Waste	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	46.85%
Freshwater	Environmental → Aquatic → Freshwater	17.12%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.61%
Sediment	Environmental → Aquatic → Sediment	7.21%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.41%
Roots	Host-Associated → Plants → Roots	2.70%
Nutrient Removal	Engineered → Wastewater → Nutrient Removal	1.80%
Marine	Environmental → Aquatic → Marine	0.90%
Peat	Environmental → Terrestrial → Peat	0.90%
Cave	Environmental → Terrestrial → Cave	0.90%
Digestive System	Host-Associated → Human → Digestive System	0.90%
Grass	Engineered → Solid Waste → Grass	0.90%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.90%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.14%
Ice	Environmental → Aquatic → Freshwater → Ice	9.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.01%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.21%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.31%
Loam	Environmental → Terrestrial → Soil → Loam	5.41%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.60%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.60%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.70%
Unclassified	Host-Associated → Plants → Roots → Unclassified	2.70%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.80%
Lake	Environmental → Aquatic → Freshwater → Lake	1.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.80%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified	1.80%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.90%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.90%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.90%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.90%
Composting	Engineered → Solid Waste → Grass → Composting	0.90%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.90%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.01%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.21%
Glacier	Environmental → Aquatic → Freshwater → Ice → Glacier	6.31%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.41%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.50%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	3.60%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.60%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.60%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.70%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	2.70%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.80%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.80%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.90%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.90%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.90%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.90%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.90%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.90%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.90%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.90%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.61%
Glacier Valley	Environmental → Aquatic → Freshwater → Ice → Glacier → Glacier Valley	6.31%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	5.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.50%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	3.60%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.60%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.70%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	2.70%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.80%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	1.80%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.80%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.80%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.80%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.80%
Wastewater Effluent	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified → Wastewater Effluent	1.80%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.90%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.90%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.90%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.90%
Lake Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Lake Sediment	0.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Agricultural Soil	0.90%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.90%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.90%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.90%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.90%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.90%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.90%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.90%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.90%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.90%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.90%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.90%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.90%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.90%
Wastewater Treatment Plant	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater Treatment Plant	0.90%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459012	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO1O1 lysis Rhizosphere grass	Environmental	Open in IMG/M
2170459019	Litter degradation MG4	Engineered	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005987	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 9/18/14 B DNA	Engineered	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006056	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 10/23/14 1A DNA	Engineered	Open in IMG/M
3300006092	Activated sludge microbial communities from wastewater treatment plant in Ulu Pandan, Singapore	Engineered	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007521	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-01	Environmental	Open in IMG/M
3300009032	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-05	Environmental	Open in IMG/M
3300009095	Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2015	Environmental	Open in IMG/M
3300009120	Lake sediment microbial communities from Tanners Lake, St. Paul, MN	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009686	Glacier valley bacterial and archeal communities from Borup Fiord, Nunavut, Canada, to study Microbial Dark Matter (Phase II) - groundupSSSS metaG	Environmental	Open in IMG/M
3300009774	Glacier valley bacterial and archeal communities from Borup Fiord, Nunavut, Canada, to study Microbial Dark Matter (Phase II) - lysozymeSSSS metaG	Environmental	Open in IMG/M
3300010331	Glacier valley bacterial and archeal communities from Borup Fiord, Nunavut, Canada, to study Microbial Dark Matter (Phase II) - ?SSSS metaG	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011414	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT266_2	Environmental	Open in IMG/M
3300011428	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT615_2	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300011442	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2	Environmental	Open in IMG/M
3300012040	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT746_2	Environmental	Open in IMG/M
3300012228	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT700_2	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015194	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb1c, glacier snout)	Environmental	Open in IMG/M
3300015198	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G2A, Ice surface)	Environmental	Open in IMG/M
3300015360	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1	Environmental	Open in IMG/M
3300015370	Groundwater microbial communities from the Aspo Hard Rock Laboratory (HRL) deep subsurface site, Sweden - OS_PC_MetaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019874	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a1	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020596	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP5.G1	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300021339	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c1	Environmental	Open in IMG/M
3300021408	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c1	Environmental	Open in IMG/M
3300022561	Borup_combined assembly	Environmental	Open in IMG/M
3300022886	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5	Environmental	Open in IMG/M
3300022915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4	Environmental	Open in IMG/M
3300025140	Glacier valley bacterial and archeal communities from Borup Fiord, Nunavut, Canada, to study Microbial Dark Matter (Phase II) - groundupSSSS metaG (SPAdes)	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025877	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_STIC10_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026983	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 21 (SPAdes)	Environmental	Open in IMG/M
3300027811	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227 HiSeq	Environmental	Open in IMG/M
3300027850	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-01 (SPAdes)	Environmental	Open in IMG/M
3300027878	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-05 (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028590	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300030613	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227	Environmental	Open in IMG/M
3300031456	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM	Host-Associated	Open in IMG/M
3300031507	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM	Host-Associated	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300034170	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
N56_01180450	2170459012	Grass Soil	MAGSRVLNWNGKDVPEELRELPAGRYVVESVDVVPELTDEEEDGLRQALGSLRTGKGRTIEQVRETIDAVLRR
4MG_05163700	2170459019	Switchgrass, Maize And Mischanthus Litter	MAGSRVLTWNGTDVPAELHDLPAGRYVVEAIDEAPTLTPEEDEGLRRALDSLRAGTSRSLAQVRGTDRR
ICCgaii200_04618171	2228664021	Soil	MLSLGMAGARVLHWNGKDIPEELRELPAGTYVVEAVDKAPTLTPDEEQGLAEALASLRAGEGRTVDQVRKTIGSILRR
ICChiseqgaiiDRAFT_08052726	3300000033	Soil	MLSLGMAGARVLHWNGKDLPEELRXLPAGTYVVEAVDKAPTLTPXEEQGLAEALASXRAGEGRTVDQVRKTIGSILRR*
ICChiseqgaiiFebDRAFT_113715127	3300000363	Soil	MLSLGMAGARVLHWNGKDIPEELRELPAGTYVVEAVDKAPTLTPDEEQGLAEALASLRAGEGRTVDQVRKTIGSILRR*
Ga0055468_101404702	3300003993	Natural And Restored Wetlands	MAGARVLYWNGKDLPTELRELPAGAYVVEAVDEAPTLTSDEQQGLADALASLRAGESRTVDQVRETIDSLLRR*
Ga0063356_1011920434	3300004463	Arabidopsis Thaliana Rhizosphere	MAGARVLRWNGQDLPDELRELPAGTYVVEAVDAPLLTPEEDEGLERALASLRAGKGRSVDQVRQSIASVLDR*
Ga0058859_110490261	3300004798	Host-Associated	MAGVRVLHWNGKDIPDELRGLPAGRYVVEPVDDVALALSPEDEEGLRQALASLRAGKGRTIDQVRQTIDAVLRR*
Ga0068869_1009816612	3300005334	Miscanthus Rhizosphere	MAGARVLHWNGKDLPEELRDLPAGRYSVEAVDELAPLSPEEDEGIRQALASLRAGNGRTIDQVRQTIDAVLRR*
Ga0070668_1004927992	3300005347	Switchgrass Rhizosphere	MAGVRVLHWNGKDIPDELRGLPAGRYVVEPVDDVAPALSPDDEEGLRQALASLRAGKGRTIDEVRQTINAALRR*
Ga0070694_1008872652	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MAGARVLHWNGKDLPEELRDLPAGRYSVEAVDELAPLSPEEDDGIRQALASLRAGNGRTIDQVRQTIDAVLRR*
Ga0070698_1014309502	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MIWLLMAGARVLHWNGKDIPEELRELPAGTYVLEAVDTAPALTPEEDQGLADALASLRAGEDRTLDQVRQTIDSIVRR*
Ga0070679_1021740591	3300005530	Corn Rhizosphere	PEELRELPAGIYVVEAVDKAPTLTPDEEQGLAEALASLRAGEGRTVDQVRKTIGSILRR*
Ga0075158_102710722	3300005987	Wastewater Effluent	MAARVLTWNGHDVPDELRGLPAGRYVVEGVDTGPALTVEEDDGLRRALASLRAGQGRTAAQVRQTIDALLRR*
Ga0075023_1002682701	3300006041	Watersheds	MAGSRVLNWNGKDVPEELRELPAGRYVVESVDVVPELTDEEEDGLRQSLGSLRMGKGRAIEQVRETIAAEPT*
Ga0075163_100726805	3300006056	Wastewater Effluent	MIWLLMAGARVLHWNGKDIPEELRELPAGTYVVEAVDSAPALTPDEDRGLAEALASLRAGEGRTLDQVRQTIDSIVRR*
Ga0082021_10095413	3300006092	Wastewater Treatment Plant	MAGARVLRWNGRDVPDELRELPAGTYVVEAVDAPGLTPEEDEGLERALASLRAGKGRSVEQVRQSVASVLDR*
Ga0079221_104203883	3300006804	Agricultural Soil	VLHWNGRDIPEELRELPAGTYVVEAVDQAPSLTADEEQGIAQALASLRAGKDRTADQVRQTIDSILRK*
Ga0075435_1004541272	3300007076	Populus Rhizosphere	MLPSMSRVLNWNGTDLPDELRDLPAGRYVVESADDPPDLTDDEEEGLRQALASLRRGEGRTADQVRATIDSVLRR*
Ga0105044_101016042	3300007521	Freshwater	MAGGARVLHWNGKDIPEELRELPAGTYVVEAVDSVPALTPDEDRGLAEALESLRVGEGRTLDQVRQTIDSIVRR*
Ga0105048_101825413	3300009032	Freshwater	MAGARVLHWNGKDIPEELRELPAGTYVVEAVGTAPALTADEDQGLADALASLRAGEGRTVDQVRQTIDSIVRR*
Ga0079224_1032827362	3300009095	Agricultural Soil	MSRVLHWNGKDLPEELRDLPAGRYVVESVDEVPELTEEEDEGIQQALRSLRAGKGRTMDEVRQAIESVLRR*
Ga0117941_10257176	3300009120	Lake Sediment	MAGARVLHWNGKDLPEELRELPAGTYLVEAVDKAPTLTPDEEQGLAEALGSLRAGEGRTVDQVRQTIGSIFRR*
Ga0111538_102657733	3300009156	Populus Rhizosphere	MLPLMTRVLHWNGTDLPEELRDLPAGRYVLEPADALPDLPDGEEEGLRQALASLRSGQGRTVDQVRATIDSVLRR*
Ga0113563_103869702	3300009167	Freshwater Wetlands	MAGARVLHWNGKDIPEELRELPAGTYVVEAVETAPALTADEDQGLADALASLRAGEGRTVDQVRQTIDSIVRR*
Ga0105238_128535211	3300009551	Corn Rhizosphere	MQVIWLLMAGARVLHWNGKDIPEELRELPAGTYVLEAIDSAPALTPDEHQGLANALASLRAGEGRTVEQVRKTIDSIIRR*
Ga0123338_100022093	3300009686	Glacier Valley	MAGSRVLHWNGTDIPDELRDLPAGTYVVEAVDGASSLTPEEDRGLAEALASLRAGEGRTVDQVRKTIDSIIRR*
Ga0123338_103560282	3300009686	Glacier Valley	MAGSRVLHWNGTDIPEELRELPAGTNVVEAVESALELSPEDDLGLSEALASLKAGEGRTLDQVRPTIDSITRR*
Ga0123339_103384992	3300009774	Glacier Valley	MAGSRVLHWNGTDIPEELRELPAGTYVVEAVESALELSPEDDLGLSEALASLKAAKGARSIRFVRRSTRSRADEDL
Ga0123336_100532082	3300010331	Glacier Valley	MAGSRVLHWNGTDIPEELRELPTGTYVVEAVESALELSPQDDLGLSEALASLKAGEGRTLDQVRPTIDSITRR*
Ga0126377_112272122	3300010362	Tropical Forest Soil	MAGARVLHWNGKDLPEELRDLPAGRYAVEAVDELAPLSPEEDEGIRQALAFLRAGKGRTIDQVRETIDAVLRR*
Ga0134125_119875371	3300010371	Terrestrial Soil	MAGARVLHWNGKDIPEELRELPAGTYVVEAVDKAPTLAPEEEQGLAEALASLRAGEGRSIDQVRKTIGSLLRR*
Ga0134121_1000643710	3300010401	Terrestrial Soil	MTAERGKVPVMAGAHVLHWNGKDVPDELRTLPAGTYVVEAVGETPELPQEVDEGLRRVVASLRTDQGRAIEQVRQTIDSILRR*
Ga0137442_11072552	3300011414	Soil	MAGARSVLHWNGVDLPAELRDLPPGTYVVEAVDQPPLLTDDEDAGLAAALASLRAGKGRTLEQVRQTIDAILRR*
Ga0137456_10205342	3300011428	Soil	MAGARVLHWNGKDVPDELRDLPAGAYVVESVGETPELTQEEDEGMRCALASLRAGKGRTIEQVRQTIDAILRR*
Ga0137451_10285122	3300011438	Soil	MAGARVLHWNGKDIPEELRGLPAGRYVVEAVDDVAPSLSQEDEDGLRQALASLRVGKGRTIDQVRQTIDAALRR*
Ga0137437_12449231	3300011442	Soil	MAGARVLHWNGKDIPDELRGLPAGRYVVEPVDDVAPSLSPEDEDGLRQALASLRAGKGRTIDQVRQTIDAALRW*
Ga0137461_10676311	3300012040	Soil	MAGSRVLTWNGKDLPAELRGLPAGRYVVEAIDEVPALTEDEDEGLRQALSSLRAGKARSVGQVRQRIDAVLRK*
Ga0137459_100017919	3300012228	Soil	MPDTLCRMAGARVLHWNGKDIPDELAGLPAGRYMVEPVDDDAPELSQQDEDGLRQALASLRAGKGRTLEQVRQTIDAALRR*
Ga0137375_108298602	3300012360	Vadose Zone Soil	MAGVRVLHWNGKDLPEELRELPAGRYALEPVDAVPPLTEEEEEGLRQALASLRAGRGRTVEQVRQTVDAALRR*
Ga0150984_1041951013	3300012469	Avena Fatua Rhizosphere	MADVRSTFHWNGKDLPEELHELPPGTYVVEAVDEPPLLTEDEDAGLSAALASLRAGKGRTLEQVRQTIDAILRR*
Ga0157308_102432921	3300012910	Soil	DELRDLPAGRYVVESADEVPELTEDEDEGLQQALASLRSGKGRTLDQVRDTIASVLCR*
Ga0137404_121412301	3300012929	Vadose Zone Soil	MAGVRVLHWNGKDIPDELRGLLAGRYVVEPVEDVALALSPEDEEGLRQALSSLRAGKGRTIDDARGR*
Ga0137410_121058001	3300012944	Vadose Zone Soil	MSIGCTLYWNGRDLPDELRALPAGTYVVEPADQVPRLTEDDEAGLHAALDSLQAGNGRTLAQVQETIATILAAAKRPRPS
Ga0153916_122681242	3300012964	Freshwater Wetlands	MAGVRVLHWNGKDVPDELRELPAGTYVVEAVDQAPTLTDDDEQGLKQALASLRAGKGRSVEDVRQTIDAILRR*
Ga0153916_128026172	3300012964	Freshwater Wetlands	MAGARVLHWNGKDIPEELRELPAGTYVVEAVDEAPSLWNDEEQGIAQALASLRAGQGRTT
Ga0157372_111006022	3300013307	Corn Rhizosphere	MAGARVLHWNGKDLPEELRELPAGTYVVEAVDKGPALTPDEEQGLADALASLRRGEGRTVDQVRKTIGSILGR*
Ga0182021_108294072	3300014502	Fen	MAGSRVLHWNGTDIPDELRDLPAGTYVVEAVDGASLLTPDEDRGLAEALASLRAGEGRSLDQVRKTIDSIIRR*
Ga0167666_10277702	3300015194	Glacier Forefield Soil	MAESRVVHWNGRDVPNELRELPAGSYVLEPVKAAHELTAEEDEGLRVAMASLRAGKGRSVDQVRYRLDTILRR*
Ga0167625_11092402	3300015198	Glacier Forefield Soil	MAGSRVLHWNGTDIPEELRELPTGTYVVEAVESALELSPEDDLGLSEALASLKAGEGRTLDQVRPTIDSITRR*
Ga0163144_117181641	3300015360	Freshwater Microbial Mat	MASARVLIWNGTDVPDELRELPAGRYVVESVDEAPVLTPEEDAGLQQALASLRAGKGRTIDQVRETIDAIIRR*
Ga0180009_1000227519	3300015370	Groundwater	MRILHWNGKDLPGELRDLPAGRYVVEPIDDVPELMRAEEEGLHRALASLRAGKGRTIDQVRQTADTAREK*
Ga0132258_119099233	3300015371	Arabidopsis Rhizosphere	MAGARVLHWNGKDIPEGLRDLPAGTYVVEAVDEAPTLTTEEEQGIAQALASLHAGSGRTKEQVRQTIDAFLGK*
Ga0132256_1033747901	3300015372	Arabidopsis Rhizosphere	MAGARVLHWNGKDIPEGLRDLPAGTYVVEAVDEAPTLTTEEEQGIAQALASLHAGSGRTKEQVRQTIDALLGK*
Ga0132255_1034692933	3300015374	Arabidopsis Rhizosphere	LSFVMAGARVLHWNGKDLPDELRELPAGTYVVEAVDEAPTLTPDEEQGLAEALASLRAGEGRTLDQVRETIASILRR*
Ga0187780_104780852	3300017973	Tropical Peatland	MRDSFWVMAGARVLHWNGKDVPDELRKLPAGTYVLEPVERARPLTEDEEDGLRAAMSSLRAGKGRTIDQVRQSIDAILRR
Ga0190265_112446962	3300018422	Soil	MLSSMPRVLHWNGTDLPEELRELPAGRYFVESADAAPDLTEAEEDGLREALASLRGGKGRTLDQVRDTVESALRR
Ga0190270_123370151	3300018469	Soil	MLPSMSRVLHWNGTDVPDELRDLPAGRYVVESADEAPELTEDEEEGLQQALASLRSGNGRTLDQVRETIASVLRR
Ga0173479_102924621	3300019362	Soil	QRDSVFLMAGSRVLTWNGKDLPAELSALPAGRYVVEALDDIPALTEEEDEGLRQALASLRAGKGRSVEQVRQKLDAVLRK
Ga0190264_107458342	3300019377	Soil	MAGARVLHWNGKDLPEELRDLPAGTYVVEAVDEVPALSPEDEQGLEKALASLRGGNGRTTDEVRQRIDASLRR
Ga0193744_10012215	3300019874	Soil	MAGARSVLHWNGVDLPEELHDLPPGTYVVEAVDQPPLLTDDEDAGLGAALASLRAGKGRTLEQVRQTIDAILRR
Ga0193727_10259553	3300019886	Soil	MAGSRVLHWNGTDIPVELRDLPAGTYVVEAVDRASALTPEEDRGLAEALASLRASEGRTVDHVRRTIDSIIRR
Ga0193726_11921342	3300020021	Soil	MAGSRVLNWNGKDVPEELRELPAGRYVVESIDVVPALTDEEEDGLRQALASLRTGTGRTVEQVR
Ga0163149_101712522	3300020596	Freshwater Microbial Mat	MAGARVLHWNGRDIPEELRGLPAGTYVVEAVETAPALTADEDQGLADALASLRAGEGRTVDQVRQTIDSIVRR
Ga0210380_105183331	3300021082	Groundwater Sediment	MAGARVLHWNGKDIPDELRGLPAGRYVVEAVDDVAPSLSQEDEDGLRQALASLRVGKGRTIDQVRQTIDAALRR
Ga0210377_101633452	3300021090	Groundwater Sediment	MAPARVLHWNGKDIPEELRELPAGRYVVEAVDRATTLSDDEEQGLAEALASLHAGEGRTLDQVRQTIGSIVRR
Ga0193706_10533794	3300021339	Soil	VAGARVLHWNGKDIPEELRELPAGTYVVEAVDSAPALTPDEDQGLAEALASLRAGEGRTVEQVRQTIDSILRR
Ga0193708_100018012	3300021408	Soil	MAGARVLHWNGKDVPKELRDLPAGTYVVEAVDETSSLSPDEEQGLQQALTSLQAGKGRTVEDVRETIEAILRK
Ga0212090_100059415	3300022561	Glacier Valley	MAGSRVLHWNGTDIPDELRDLPAGTYVVEAVDGASSLTPEEDRGLAEALASLRAGEGRTVDQVRKTIDSIIRR
Ga0212090_105317321	3300022561	Glacier Valley	MAGSRVLHWNGTDIPEELRELPTGTYVVEAVESALELSPQDDLGLSEALASLKAGEGRTLDQVRPTIDSITRR
Ga0247746_10023485	3300022886	Soil	MAGSRVLTWNGKDLPAELRELPAGRYVVEAVDEVPALTEEEDEGLRQALASLRTGQGRSAAQVRQRIDAVLRK
Ga0247790_1000002332	3300022915	Soil	MGQSSLVVALCRDSVSPMSGARGLTWNGKDLPAELRDLPAGRYVVEAVEEVPALTADEDEGLRQALASLRAGNGRTAAQVRQRIDAVLRR
Ga0209724_11083922	3300025140	Glacier Valley	MAGSRVLHWNGTDIPEELRELPAGTNVVEAVESALELSPEDDLGLSEALASLKAGEGRTLDQVRPTIDSITRR
Ga0209640_113006821	3300025324	Soil	VLTWNGKDLPEELRELPAGRYVVEAVDEAPALTEEEDRGLRQVLASLQAGKGCSVEQVRQ
Ga0208460_101337103	3300025877	Anaerobic Digestor Sludge	MAARVLTWNGHDVPDELRGLPAGRYVVEGVDTGPALTVEEDDGLRRALASLRAGQGRTAAQVRQTIDALLRR
Ga0207670_100296234	3300025936	Switchgrass Rhizosphere	MAGARVLHWNGKDLPEELRDLPAGRYSVEAVDELAPLSPEEDDGIRQALASLRAGNGRTIDQVRQTIDAVLRR
Ga0207689_116612542	3300025942	Miscanthus Rhizosphere	RVLHWNGKDLPEELRDLPAGRYSVEAVDELAPLSPEEDEGIRQALASLRAGNGRTIDQVRQTIDAVLRR
Ga0207712_111368813	3300025961	Switchgrass Rhizosphere	MAGVRVLHWNGKDIPDELRGLPAGRYVVEPVDDVAPALSPDDEEGLRQALASLRAGKGRTIDEVRQTINAALRR
Ga0207668_104917801	3300025972	Switchgrass Rhizosphere	MMAGVRVLHWNGKDIPDELRGLPAGRYVVEPVDDVAPALSPDDEEGLRQALASLRAGKGRTIDEVRQTINAALRR
Ga0207856_10003589	3300026983	Tropical Forest Soil	MGWQRASVSLMAGSRVLTWNGKDLPMELRALPAGRYLVESIDDVPALTAEEDEGLRQALASLRAGRGRSVDQVRQRIDAVLRK
Ga0256868_104316981	3300027811	Soil	MAGSRVLTWNGKDLPEELRELPAGRYVVESVDEVPALTDDEEEGVRQALASLRAGK
Ga0209591_107049542	3300027850	Freshwater	MAGGARVLHWNGKDIPEELRELPAGTYVVEAVDSVPALTPDEDRGLAEALESLRVGEGRTLDQVRQTIDSIVRR
Ga0209181_105560581	3300027878	Freshwater	MAGARVLHWNGKDIPEELRELPAGTYVVEAVGTAPALTADEDQGLADALASLRAGEGRTVNQVRQ
Ga0209486_104997392	3300027886	Agricultural Soil	MAGARVVRWNGKDLPEELRELPAGTYVLEAVDAPALSEEDEEGLRQALASLQAGHGRTLDQVRATIASLVDR
Ga0268264_113514761	3300028381	Switchgrass Rhizosphere	ARVLHWNGKDLPEELRDLPAGRYSVEAVDELAPLSPEEDEGIRQALASLRAGNGRTIDQVRQTIDAVLRR
Ga0247823_100496594	3300028590	Soil	MAGARVLHWNGKDLPEELRELPAGTYVVEAVDKSPTLTPDEEQGLAEALASLRAGEGRTVDQVRQTIGSIFRR
Ga0247824_100369051	3300028809	Soil	MAGARVLHWNGKDLPEELRELPAGTYVVEAVDKAPTLTPDEEQGLAEALASLRAGEGRTVDQVRQTIGSIFRR
Ga0299915_100004009	3300030613	Soil	MAGSRVLTWNGKDLPEELRELPAGRYVVESVDEVPALTDDEEEGVRQALASLRAGKGRTIEQVRQTIDNVLRR
Ga0307513_110866001	3300031456	Ectomycorrhiza	MASTRVLHWNGKDIPEELRELPAGAYVVESVDKAPPLTSDEEQGLKQALASLRAGNGRSVDQVRQAIDSILRR
Ga0307509_102288413	3300031507	Ectomycorrhiza	VAGARVLHWNGKDVPEELRELPAGTYVVEAVDSAPALTSDEDRGLAEALASLRVGEGRTVDQVRKTIDSIVRR
Ga0307509_105878853	3300031507	Ectomycorrhiza	MAGVRVLHWNGKDLPDELRELPAGAYVVEAVDEAPSLTNDEEQGLAQALASLRAGKGRSVEDVRQT
Ga0310887_110123911	3300031547	Soil	VDRHCGTVCSMAGSRVLTWNGKDLPEELRELPAGRYSVEAVDEAPALTEEEDRGLRQALASLQAGKGRSVE
Ga0247727_101074631	3300031576	Biofilm	LRRNTLILMAGARVVHWNGKDVPDELRELPAGTYVVEPVDRAPTPTQEEEDGLRAAMASLRAGKGRTVEQVRESIDAILRR
Ga0307405_101938672	3300031731	Rhizosphere	MAGSRVLTWNGKDLPTELRKLPAGRYLVEAVDEVPALTEEEDEGLRQALASLRAGKGRSAPIAR
Ga0307406_108293961	3300031901	Rhizosphere	MPGARVLTWNGKDLPAELHELPAGQYLVELVDESAGDAPVLTEEEDEELRRALASFQEGKGSSLA
Ga0308175_10000006726	3300031938	Soil	MAGVRVLHWNGKDIPDELRGLPAGRYVVEPVDDVAPVLSPEDEEGLRQALASLRMGNGRTIDQVRQTIDAVLRR
Ga0214473_106617662	3300031949	Soil	MAGSRVLTWNGKDLPAELRELPAGRYLVEAVDDIPALTEEEDEGLRQALASLRAGKGCSVVEVRQRIDAILCK
Ga0214473_111451242	3300031949	Soil	MAGSRVLTWNGKDLPAELRELPAGRYVVEAVDDIPPLTEEEDEGLRQALASLRAGKGRSVAQVRQRIDAVLRR
Ga0326597_108559493	3300031965	Soil	MTRVFHWNGKDTPEELRDLPAGRYVVQSLDDVVQLTREEEEGLQEALASLRAGKGRTLDDVRATIDASLDR
Ga0307416_1005862082	3300032002	Rhizosphere	MSAARILTWNGKDVPEELQELPAGRYVVEPMNEQLTLSEEEDEGLRQALASLRAGKGRTLEQVRNRVDSILRR
Ga0318533_109319111	3300032059	Soil	MAGARVLHWNGKDLPEELRELPAGTYVVEAVDKSPTLTTDEEQGLADALVSLRAGEGRTLAQVRETIDSRLRR
Ga0308173_119832552	3300032074	Soil	MAGARVLHWNGKDIPEELRELPAGTYVVEAVDQAPSLTNDEEHGIAQALASLRTGQGRTTEQVRQRIDSLLRK
Ga0307415_1001219812	3300032126	Rhizosphere	MAGSRVLTWNGKDLPTELRKLPAGRYLVEAVDEVPALTEDEGLRQALASLRAGKGRSAPIAR
Ga0307415_1008521272	3300032126	Rhizosphere	MPATEQRVIACHHMPGARVLTWNGKDLPAELHDLPAGQYLVELVDESAGDAPVLTEEEDEELRRALASFQEGKGSSLAEIRQRIEDLLRKAGR
Ga0315912_100594833	3300032157	Soil	MAGARVLHWNGKDIPEELRELPAGTYVVEAVDEAPALTNDEEQGIAHALASLRAGQGRTTEQVRERIDSLLRK
Ga0316601_1002800992	3300033419	Soil	MAGSRVLTWNGKDLPAELRELPAGRYVVEAVDDAPALTEEEDEGLRQALASLHAGKGRSLEQVRQRIAAVLRK
Ga0316601_1015924522	3300033419	Soil	MAGARVFHWNGKDIPEELAGLPAGRYVVEPVDDAAPELSQEDEDGLRQALASLRAGKGRTLDQVRQTIDAVLHR
Ga0316601_1025178261	3300033419	Soil	MAGSRVLTWNGKDLPAELRELPAGRYVVEAVDEVPALTEEEDEGLRQALASLQAGKGRSLAQVRQRIDAVLRK
Ga0326726_106572174	3300033433	Peat Soil	AGARVLHWNGKDIPEELRELPAGTYVVEAVDSAPALTPDEEQGLAEALASLRAGEGRTVDQVRQTIDSIIRR
Ga0316628_1001428275	3300033513	Soil	MAGARVLHWNGKDLPEELRELPAGTYVVEAVDKAPALTPDEEQGLADALASLRRGEGRTVDQVRKTIGSLLGR
Ga0370487_0054917_1007_1228	3300034170	Untreated Peat Soil	MAGSRVVHWNGRDVPDELRELPAGSYVLEPVEAAHELTAEEDEGLRMAMASLRAGKGRSVDQVRHRLDAILRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085356

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences