Metagenome / Metatranscriptome Family F085424

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F085424
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	106 residues
Representative Sequence	MKIRQWEIWKARPAGFEADHWFVVLSGQERCDEPRQLLVNGLACFTLRGRLRKSEVQLNSADGFAGPTACQCDFLYALEKSRLHSSQGLVSWERQQQIKSKLKEVLRL
Number of Associated Samples	100
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	51.35 %
% of genes near scaffold ends (potentially truncated)	34.23 %
% of genes from short scaffolds (< 2000 bps)	82.88 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.87

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (99.099 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (19.820 % of family members)
Environment Ontology (ENVO)	Unclassified (28.829 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.441 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.12% β-sheet: 26.47% Coil/Unstructured: 54.41%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.87
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.87
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
b.34.6.0: automated matches	d5hk3a_	5hk3	0.86798
b.34.6.2: Kid/PemK	d4hkea1	4hke	0.85863
b.34.6.0: automated matches	d6l2aa1	6l2a	0.84367
b.34.6.2: Kid/PemK	d7dhpa_	7dhp	0.77653
b.34.6.2: Kid/PemK	d1m1fa_	1m1f	0.76885

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF03928	HbpS-like	3.60
PF01238	PMI_typeI_C	2.70
PF12846	AAA_10	2.70
PF05635	23S_rRNA_IVP	1.80
PF03167	UDG	1.80
PF00535	Glycos_transf_2	1.80
PF03190	Thioredox_DsbH	1.80
PF04011	LemA	0.90
PF00072	Response_reg	0.90
PF00206	Lyase_1	0.90
PF13847	Methyltransf_31	0.90
PF01116	F_bP_aldolase	0.90
PF01844	HNH	0.90
PF00174	Oxidored_molyb	0.90
PF16363	GDP_Man_Dehyd	0.90
PF01402	RHH_1	0.90
PF12679	ABC2_membrane_2	0.90
PF00150	Cellulase	0.90
PF01336	tRNA_anti-codon	0.90
PF13304	AAA_21	0.90
PF09720	Unstab_antitox	0.90
PF03255	ACCA	0.90
PF02452	PemK_toxin	0.90
PF13274	DUF4065	0.90
PF08241	Methyltransf_11	0.90
PF01244	Peptidase_M19	0.90
PF02913	FAD-oxidase_C	0.90
PF04185	Phosphoesterase	0.90
PF01797	Y1_Tnp	0.90
PF12698	ABC2_membrane_3	0.90
PF00668	Condensation	0.90
PF07394	DUF1501	0.90
PF00717	Peptidase_S24	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG1482	Mannose-6-phosphate isomerase, class I	Carbohydrate transport and metabolism [G]	2.70
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	1.80
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	1.80
COG1331	Uncharacterized conserved protein YyaL, SSP411 family, contains thoiredoxin and six-hairpin glycosidase-like domains	General function prediction only [R]	1.80
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	1.80
COG2355	Zn-dependent dipeptidase, microsomal dipeptidase homolog	Posttranslational modification, protein turnover, chaperones [O]	0.90
COG2730	Aryl-phospho-beta-D-glucosidase BglC, GH1 family	Carbohydrate transport and metabolism [G]	0.90
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.90
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.90
COG3934	Endo-1,4-beta-mannosidase	Carbohydrate transport and metabolism [G]	0.90
COG0191	Fructose/tagatose bisphosphate aldolase	Carbohydrate transport and metabolism [G]	0.90
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.90
COG0825	Acetyl-CoA carboxylase alpha subunit	Lipid transport and metabolism [I]	0.90
COG1020	EntF, seryl-AMP synthase component of non-ribosomal peptide synthetase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.90
COG1704	Magnetosome formation protein MamQ, lipoprotein antigen LemA family	Cell wall/membrane/envelope biogenesis [M]	0.90
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.90
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.90
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.10 %
Unclassified	root	N/A	0.90 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.10 %
Unclassified	root	N/A	0.90 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.10 %
Unclassified	root	N/A	0.90 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	92.79 %
Unclassified	root	N/A	0.90 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	92.79 %
Unclassified	root	N/A	0.90 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	82.88 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	1.80 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.90 %
Unclassified	root	N/A	0.90 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	82.88 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1.80 %
Opitutales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales	0.90 %
Unclassified	root	N/A	0.90 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	82.88 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1.80 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	0.90 %
Unclassified	root	N/A	0.90 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_108471015	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	529	Open in IMG/M
3300005167\|Ga0066672_10001422	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	8859	Open in IMG/M
3300005186\|Ga0066676_10786319	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	645	Open in IMG/M
3300005450\|Ga0066682_10097040	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1847	Open in IMG/M
3300005553\|Ga0066695_10906429	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	503	Open in IMG/M
3300005557\|Ga0066704_10584563	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	721	Open in IMG/M
3300005558\|Ga0066698_10826126	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	598	Open in IMG/M
3300005559\|Ga0066700_10671189	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	715	Open in IMG/M
3300005560\|Ga0066670_10157685	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1332	Open in IMG/M
3300005563\|Ga0068855_100070336	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	4071	Open in IMG/M
3300005568\|Ga0066703_10628034	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	623	Open in IMG/M
3300005569\|Ga0066705_10840207	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	546	Open in IMG/M
3300005901\|Ga0075274_1003233	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1794	Open in IMG/M
3300006046\|Ga0066652_100899864	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	844	Open in IMG/M
3300006797\|Ga0066659_10144658	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1683	Open in IMG/M
3300006797\|Ga0066659_10792375	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	783	Open in IMG/M
3300006800\|Ga0066660_11151698	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	611	Open in IMG/M
3300006894\|Ga0079215_10884138	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	638	Open in IMG/M
3300006918\|Ga0079216_10356205	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	896	Open in IMG/M
3300009012\|Ga0066710_100371567	All Organisms → cellular organisms → Bacteria	2122	Open in IMG/M
3300009012\|Ga0066710_100936910	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1334	Open in IMG/M
3300009012\|Ga0066710_101567846	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1012	Open in IMG/M
3300009012\|Ga0066710_103279235	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	619	Open in IMG/M
3300009038\|Ga0099829_10346326	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1223	Open in IMG/M
3300009091\|Ga0102851_13462642	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	507	Open in IMG/M
3300009137\|Ga0066709_100583361	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1590	Open in IMG/M
3300009147\|Ga0114129_12934201	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	563	Open in IMG/M
3300009502\|Ga0114951_10616103	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	520	Open in IMG/M
3300009678\|Ga0105252_10184872	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	886	Open in IMG/M
3300010341\|Ga0074045_10093063	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2094	Open in IMG/M
3300010391\|Ga0136847_13135019	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1343	Open in IMG/M
3300011400\|Ga0137312_1002404	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1830	Open in IMG/M
3300012189\|Ga0137388_10188780	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1851	Open in IMG/M
3300012198\|Ga0137364_10498940	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	915	Open in IMG/M
3300012200\|Ga0137382_10070628	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2237	Open in IMG/M
3300012201\|Ga0137365_10075378	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2545	Open in IMG/M
3300012201\|Ga0137365_10958438	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	622	Open in IMG/M
3300012203\|Ga0137399_11015002	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	698	Open in IMG/M
3300012207\|Ga0137381_10113291	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2310	Open in IMG/M
3300012207\|Ga0137381_11772005	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	507	Open in IMG/M
3300012208\|Ga0137376_10563930	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	986	Open in IMG/M
3300012211\|Ga0137377_10191055	All Organisms → cellular organisms → Bacteria	1966	Open in IMG/M
3300012351\|Ga0137386_11065322	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	572	Open in IMG/M
3300012356\|Ga0137371_11206424	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	564	Open in IMG/M
3300012359\|Ga0137385_10516202	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1010	Open in IMG/M
3300012361\|Ga0137360_11552237	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	567	Open in IMG/M
3300012393\|Ga0134052_1114062	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	548	Open in IMG/M
3300012469\|Ga0150984_119791836	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	546	Open in IMG/M
3300012922\|Ga0137394_10148949	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1991	Open in IMG/M
3300012923\|Ga0137359_10226655	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1668	Open in IMG/M
3300012927\|Ga0137416_10870154	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	800	Open in IMG/M
3300012929\|Ga0137404_10336017	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1319	Open in IMG/M
3300012929\|Ga0137404_10879948	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	816	Open in IMG/M
3300012944\|Ga0137410_10464488	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1029	Open in IMG/M
3300012972\|Ga0134077_10474086	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	551	Open in IMG/M
3300012976\|Ga0134076_10015187	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2676	Open in IMG/M
3300014162\|Ga0181538_10635572	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	555	Open in IMG/M
3300014164\|Ga0181532_10320849	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	873	Open in IMG/M
3300014165\|Ga0181523_10673857	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	566	Open in IMG/M
3300014502\|Ga0182021_10638593	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1275	Open in IMG/M
3300014502\|Ga0182021_12453618	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	627	Open in IMG/M
3300014839\|Ga0182027_11860107	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	580	Open in IMG/M
3300015358\|Ga0134089_10146474	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	930	Open in IMG/M
3300015360\|Ga0163144_10013261	All Organisms → cellular organisms → Bacteria	17218	Open in IMG/M
3300017659\|Ga0134083_10008029	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	3458	Open in IMG/M
3300018018\|Ga0187886_1312101	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	584	Open in IMG/M
3300018079\|Ga0184627_10012722	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	3993	Open in IMG/M
3300018085\|Ga0187772_11030442	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	602	Open in IMG/M
3300018086\|Ga0187769_11447489	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	520	Open in IMG/M
3300018088\|Ga0187771_10824730	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	787	Open in IMG/M
3300018090\|Ga0187770_10121367	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1970	Open in IMG/M
3300018482\|Ga0066669_10449490	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1106	Open in IMG/M
3300020057\|Ga0163151_10074789	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2312	Open in IMG/M
3300020074\|Ga0194113_10041409	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4607	Open in IMG/M
3300020083\|Ga0194111_10020055	All Organisms → cellular organisms → Bacteria	6665	Open in IMG/M
3300020084\|Ga0194110_10375761	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	970	Open in IMG/M
3300020195\|Ga0163150_10019992	All Organisms → cellular organisms → Bacteria	6254	Open in IMG/M
3300020197\|Ga0194128_10046994	All Organisms → cellular organisms → Bacteria	3223	Open in IMG/M
3300020221\|Ga0194127_10225003	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1302	Open in IMG/M
3300020603\|Ga0194126_10033936	All Organisms → cellular organisms → Bacteria	5234	Open in IMG/M
3300021403\|Ga0210397_10189560	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1463	Open in IMG/M
3300021559\|Ga0210409_10679503	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	900	Open in IMG/M
3300025949\|Ga0207667_10536003	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1185	Open in IMG/M
3300025960\|Ga0207651_10860157	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	806	Open in IMG/M
3300026022\|Ga0208649_1018754	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	614	Open in IMG/M
3300026309\|Ga0209055_1096774	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1189	Open in IMG/M
3300026317\|Ga0209154_1041065	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2090	Open in IMG/M
3300026324\|Ga0209470_1386159	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	500	Open in IMG/M
3300026335\|Ga0209804_1137274	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1102	Open in IMG/M
3300026529\|Ga0209806_1242510	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	608	Open in IMG/M
3300026536\|Ga0209058_1270750	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	588	Open in IMG/M
3300026552\|Ga0209577_10471187	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	858	Open in IMG/M
3300027063\|Ga0207762_1034237	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	767	Open in IMG/M
3300027835\|Ga0209515_10303243	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	893	Open in IMG/M
3300027846\|Ga0209180_10385800	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	795	Open in IMG/M
3300027896\|Ga0209777_10161944	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1834	Open in IMG/M
3300027896\|Ga0209777_10174763	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1749	Open in IMG/M
3300028800\|Ga0265338_10293858	Not Available	1183	Open in IMG/M
3300031910\|Ga0306923_10760315	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1074	Open in IMG/M
3300031962\|Ga0307479_11612511	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	604	Open in IMG/M
3300031997\|Ga0315278_11859194	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	567	Open in IMG/M
3300032118\|Ga0315277_10449130	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1308	Open in IMG/M
3300032177\|Ga0315276_10938865	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	922	Open in IMG/M
3300032397\|Ga0315287_12865087	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	509	Open in IMG/M
3300032401\|Ga0315275_10417317	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1504	Open in IMG/M
3300032805\|Ga0335078_12432213	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	543	Open in IMG/M
3300033158\|Ga0335077_11910028	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	554	Open in IMG/M
3300033402\|Ga0326728_10288948	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1511	Open in IMG/M
3300033402\|Ga0326728_10780166	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	700	Open in IMG/M
3300033402\|Ga0326728_10892409	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	632	Open in IMG/M
3300033977\|Ga0314861_0052199	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2263	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.59%
Host-Associated	Host-Associated	5.41%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.37%
Aquatic	Environmental → Aquatic	25.23%
Plants	Host-Associated → Plants	5.41%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.67%
Freshwater	Environmental → Aquatic → Freshwater	21.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.60%
Sediment	Environmental → Aquatic → Sediment	2.70%
Peat	Environmental → Terrestrial → Peat	2.70%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.80%
Marine	Environmental → Aquatic → Marine	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.05%
Lake	Environmental → Aquatic → Freshwater → Lake	14.41%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.71%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.70%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.70%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.80%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.80%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.90%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.90%
Loam	Environmental → Terrestrial → Soil → Loam	0.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.32%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	24.32%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	9.01%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.01%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	5.41%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.60%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.70%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.70%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.90%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.90%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	19.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	18.92%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	5.41%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.41%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	4.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.50%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.60%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	2.70%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.70%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	2.70%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.70%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.80%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.80%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.80%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.90%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.90%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.90%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.90%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.90%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.90%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.90%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.90%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.90%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.90%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005901	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_201	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009502	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300011400	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT133_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012393	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015360	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020057	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP5.IB-2	Environmental	Open in IMG/M
3300020074	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200m	Environmental	Open in IMG/M
3300020083	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015033 Kigoma Deep Cast 300m	Environmental	Open in IMG/M
3300020084	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015032 Kigoma Deep Cast 1200m	Environmental	Open in IMG/M
3300020195	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.P2.IB	Environmental	Open in IMG/M
3300020197	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015037 Kigoma Deep Cast 65m	Environmental	Open in IMG/M
3300020221	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015036 Kigoma Deep Cast 100m	Environmental	Open in IMG/M
3300020603	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015035 Kigoma Deep Cast 150m	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026022	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_201 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027063	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 37 (SPAdes)	Environmental	Open in IMG/M
3300027835	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW60B uncontaminated upgradient, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1084710151	3300001213	Wetland	VWKSRPPGFNSDHWFVIVSGQERCDEPRQLYVNGLACFTLRGALGKTEAQLDSADGFAGPTAVQCDYIYSLEKAALHSSQGLVSWERKERLKSKLKEVLRL*
Ga0066672_100014224	3300005167	Soil	MKIRQWEVWKSRPPGFEKDHWFVLLSGQELCDDSHELLVNGLACWSLRGIPDQLQVRLNSADGFATPTVCDCDFVFALEKSKLHSSLGMVSWERQQAIKAKVKEVFRL*
Ga0066676_107863191	3300005186	Soil	MKPHQWEVWKCRPPGFERDHWFVVVSGQERCDEPRQLLVNALACFTLRGQPLKSEVRLNSADGFESPTVCQCDFLYGLEKSRLHSPLGFVSWERQQQLKARLKEVFRL*
Ga0066682_100970402	3300005450	Soil	VKIHQFEVFKGRPPGFQKDHWFVILSHQELCDQPRELAVNGLACFSLRGQPSKVDVRLNSADGFQVPTVCPCDFIYVLEKRALHSSLGLVSWERQQAIKSRLKEVFRL*
Ga0066695_109064291	3300005553	Soil	RFSRAQEAQGGDGSRASKPDEVKIHQFEVFKGRPPGFQKDHWFVILSHQELCDQPRELAVNGLACFSLRGQPSKVDVRLNSADGFQVPTVCPCDFIYVLEKRALHSSLGLVSWERQQAIKSRLKEVFRL*
Ga0066704_105845631	3300005557	Soil	MKIRQWEVWKARPEGFANDHWFVLISGQERCDAPRLRLVNGLGCYTLRGELVPTDVQLDAADGFSSPTACPCDFFYPLEKARLHSSQGLVSWERQQQIKSKIKELMRL*
Ga0066698_108261262	3300005558	Soil	FERDHWFVVVSGQERCDELRQLLVNALACFTLRGQPLKSEVRLNSADGFESPTVCQCDFLYGLEKSRLHSPLGFVSWERQQQLKARLKEVFRL*
Ga0066700_106711891	3300005559	Soil	WEVWKSRPPGFEKDHWFVLLSGQELCDDSHELLVNGLACWSLRGIPDQLQVRLNSADGFATPTVCDCDFVFALEKSKLHSSLGMVSWERQQAIKAKVKEVFRL*
Ga0066670_101576853	3300005560	Soil	MNVRQWEVWKGRPPAFARDHWFVILSAPELCADARQLLVNGLACFSLRGNPGKVEVRLNSADGFPTPTVCDCDFVYVLEKRALHSSLGLVSWERQQAIKARLKEVFRL*
Ga0068855_1000703365	3300005563	Corn Rhizosphere	MNPRPWEIWKAKPPGFEREHWFVIISGPERCEEPRQLQLNGLACFTLRGDLRKSEVRLDSADGFPGLTACQCDFLYSIPKSILHSNIGFVAWERQQQIKSKLKEVFRL*
Ga0066703_106280342	3300005568	Soil	EKDHWFVLLSGQELCDDSHELLVNGLACWSLRGIPDQLQVRLNSADGFATPTVCDCDFVFALEKSKLHSSLGMVSWERQQAIKAKVKEVFRL*
Ga0066705_108402071	3300005569	Soil	QPLSGAPARRIFRRLLSPARGSTGPAGRNAQSPPTAETMNVRQWEVWKGRPPAFARDHWFVILSAPELCADARQLLVNGLACFSLRGNPGKVEVRLNSADGFPTPTVCDCDFVYVLEKRALHSSLGLVSWERQQAIKARLKEVFRL*
Ga0075274_10032333	3300005901	Rice Paddy Soil	MKIHQWEVWKSRPPGFERDHWFVIISGQERCDEPRQLNVNGLACFTLRGPLLKSQVQLNSADGFAAPTALQCDYLYGLEKKGLHSSQGLVSWERQQAIKSKVREVLRF*
Ga0066652_1008998642	3300006046	Soil	MRQWEIWKGKPEGFKTDHWFVVISGQERCADPHVHLVNGLACFTLRGAPEKADVVLDSADGFQTQTACACDFLFPLIKSKVHSNLGLVSWERQQQIKAKIKEVMRL*
Ga0066659_101446581	3300006797	Soil	QFECFKGRPPGFQKDHWFVILSHQELCDQPRELAVNGLACFSLRGQPSKVDVRLNSADGFQVPTVCPCDFIYVLEKRALHSSLGLVSWERQQAIKSRLKEVFRL*
Ga0066659_107923752	3300006797	Soil	MKIRQWEIWKARPADFRADHWFVVISGQERCDAQNLRMVNGLACFSLRGRLSVMDVQLDIADALPAPTACQCDYLYPLEKSRLHSLQGRVSWERQQQIKGKIKELLRL*
Ga0066660_111516982	3300006800	Soil	MKIRQWEIWKARPADFRADHWFVVISGQERCDAQNLRMVNGLACFSLRGRLSVMDVQLDIADALPAPTACQCDYLYPLEKSRLHSLQGRVSW
Ga0079215_108841381	3300006894	Agricultural Soil	PPGFEREHWFVIFSPQERCDDPRQLLVNGLACFSLRGQPDKVEVRLNSADGFQAATVCDCDFVYVLEKTKLHSALGLVSWERQQAIKAKLKEVFRL*
Ga0079216_103562053	3300006918	Agricultural Soil	MKLRQWEVWKARPPGLEREHWFVIFSPQERCDDPRQLLVNGLACFSLRGQPDIVEVRLNSADGFQAATVCDCDFVYVLEKTKLHSSLGSVSWERQQAIKAKLKEVFRL*
Ga0066710_1003715674	3300009012	Grasslands Soil	FVIISGQERCDEPRQLLVNGLACFTLRGPSGRTEVVLNTADGFAGPTVCQCDYLYGLERAKLHTSLGMVSWERQQALKSKLKEVLRL
Ga0066710_1009369102	3300009012	Grasslands Soil	MKIRQWEIWKARPADFQADHWFVVISGQERCDAQNLRMVNGLACFTLRGRLSVMDVQLDIADGLSAPSACQCDYLYPLEKSRLHSAQGMISWERQQQIKGKIKELLRL
Ga0066710_1015678462	3300009012	Grasslands Soil	MKIRQWEIWKARPADFNADHWFVVISGQERCDAQKLRMVNGLACFTLRGRLGLMDVQLGAADGLVAPTACQCDYLYPLEKSRLHSAQGMVSWERQQQIKGRIKELLRL
Ga0066710_1032792352	3300009012	Grasslands Soil	MSVRQWEVWKSRPPGMQRDHWFVILSGNELCADPRELLVNGLACFTLRGDPDKVEVRLNSADGFASPTVCDCDFIYALEKSKLHSSLGNVSWERQQSIKAKVKEVFRL
Ga0099829_103463261	3300009038	Vadose Zone Soil	SAMKIYQFEIWKTRPPQFTNDHWFVVISSPERCTNPHQLFVNGLACFTVRGSPLKSDVVLNSADGFSASTACQCDYFYSLEKAKLHSGQGPVSWERQQAIKAKVREVFRF*
Ga0102851_134626422	3300009091	Freshwater Wetlands	MRIHQWDVWKTRPPGFAADHWFVIISGQERCDEPRQLMVNGLACFTLRGNLRKSEVQLNAADGFSAPTVCQCDYIYCLEKSRLHSGQGLVSWERQQQIKSILKSVLRF*
Ga0066709_1005833612	3300009137	Grasslands Soil	MKIRQWEIWKARPADFQADHWFVVISGQERCDAQNLRMVNGLACFTLRGRLSVMDVQLDIADGLSEPSACQCDYLYPLEKSRLHSAQGMISWERQQQIKGKIKELLRL*
Ga0114129_129342012	3300009147	Populus Rhizosphere	MNPHQWEIWKCRPPGFERDHWFVVVSGQERCDEPRQLLVNALACFTLRGQSRKSEVRLNSADGFENPTVCQCDYLYGLEKSGLHSPLGFVSWERQQQLKARLKEVLRL*
Ga0114951_106161031	3300009502	Freshwater	MKIHQWEVWKTRPARFEVDHWFMIISGPERCDGPRQLMVNGLACSTLRGGLRKSEVQLNGADNFSAPTACQCDFVYCLETAKLHSGQVQVYQTAIN
Ga0105252_101848722	3300009678	Soil	MKPRQWEVWKCRPPGFERDHWFVVVSGQERCDEPRQLLVNALACFTLRGQSLKSEVRLNSADGFESPTVCQCDYLYGLEKSRLHSPLGFVSWERQQQIKARLKEVLRL*
Ga0074045_100930633	3300010341	Bog Forest Soil	MRIRQWEIWKARPADFQADHWFVVISGQERCDAQNLRMVNGLACFTLRGRLNVVDVQLDAADGLSAPTACQCDYLYPLEKSRLHSAQGMVGWERQQQIKGKIKELLRL*
Ga0136847_131350192	3300010391	Freshwater Sediment	MKPHQWEVWKCRPPGFERDHWFVVVSGQERCDEPRQLLVNALACFTLRGQPLKSELRLNSADGFESPTVCQCDYLYDLEKSRLHSPLGFVSWERQQQIKARLKEVFRL*
Ga0137312_10024043	3300011400	Soil	MKVRQWELWKARPPGFERDHWFVIFSPQERCDDPRQLLVNGLACFSLRGQPGKLEVRLNSADGFQTATVCDCDFIYVLEKAKLHAGLGLVSWERQQAIKSKLKELFRLY*
Ga0137388_101887803	3300012189	Vadose Zone Soil	MKIYQFEIWKTRPPQFTNDHWFVVISSPERCTNPHQLFVNGLACFTVRGSPLKSDVVLNSADGFSASTACQCDYFYSLEKAKLHSGQGPVSWERQQAIKAKVREVFRF*
Ga0137364_104989402	3300012198	Vadose Zone Soil	MKIRQWEIWKARPADFQADHWFVVISGQERYDAQNLRMVNGLACFTLRGRLSVMDVQLDIADGLSAPTACQCDYLYPLEKSRLHSAQGMISWERQQQIKGKIKELLRL*
Ga0137382_100706284	3300012200	Vadose Zone Soil	MKQWEIWKSRPPEFEKDHWFVIISAPERIASPRHQHVNGLACFTLRGELLGTDVRLNSADGFAAPTACQCDLLYVLEKSKALSRTEQVSYERPQAIKRKVIEVLRFIPA*
Ga0137365_100753785	3300012201	Vadose Zone Soil	MKQWEIWKARPPEFNTDHWFVIVSAPERIASPRHQHVNGLACFTLRGKLLGTDVQLNSADGFAAPTACQCDLLYVLEKSRAHSRTGQVTYERQQAIKRKVIEVLRFIPA*
Ga0137365_109584381	3300012201	Vadose Zone Soil	MKIRQWEVWKSRPPGFEKDHWFVILSGQERCDEARQLVVNGLACFHLRGDPRKSEVRLDSADGFSDPTVVQCDYFYGIEKSKLHSGLGSVSWERQQQLKSKLKEVLRL*
Ga0137399_110150021	3300012203	Vadose Zone Soil	MNVRQWEVWKGRPPAFARDHWFLILSAPELGADARQLLVNGLACFSLRGDPGKVEVRLNSADGFPTPTVSDCDFVYILEKRALHSGLGPVSWERQQAIKAKLKEIFRL*
Ga0137381_101132912	3300012207	Vadose Zone Soil	MKIRQWEIWKARPADFQADHWFVVISGQERCDAQNLRMVNGLACFTLRGRLSVMDVQLDIADGLSAPSACQCDYLYPLEKSRLHSAQGMISWERQQQIKGKIKELLRL*
Ga0137381_117720052	3300012207	Vadose Zone Soil	MRQWEIWKSRPPGFERDHWFVIVSSRERCEHPRQLLINGLVCFTLRGEPLKCDVRLNSADGFEAATVCQCDYLYNLEKARLHSPLGFVSWERQQQIKARIKEVFRF*
Ga0137376_105639303	3300012208	Vadose Zone Soil	MKIRQWEVWKSRPPGFEKDHWFVILSGQERCDEARQLVVNALACFHLRGDPRKSEVRLDSADGFSDPTVVQCDYFYGIEKSKLHSGLGSVSWERFLLSTFYF
Ga0137377_101910554	3300012211	Vadose Zone Soil	MKIRQWEIWKARPADFNADHWFVVISGQERCDAQNLRMVNGLACFTLCGRLGLMDVQLDAADGLVAPTACQCDYIYPLEKSRLHSAQGMVSWERQQQIKGRIKELLRL*
Ga0137386_110653221	3300012351	Vadose Zone Soil	IWKTRPPQFTNDHWFVVISIPERCANPHQLFVNGLACFTVRGSPLKSDVVLNSADGFSASTACQCDYFYSLEKAKLHSGQGPVSWERQQAIKAKVREVFRF*
Ga0137371_112064241	3300012356	Vadose Zone Soil	PADFQADHWFVVISGQERCDAQNLRMVNGLACFTLRGRLSVMDVQLDIADGLSAPTACQCDYLYPLEKSRLHSAQGMISWERQQQIKGKIKELLRL*
Ga0137385_105162021	3300012359	Vadose Zone Soil	MKIYQFEIWKTRPPQFSNDHWFVVISSPERCTNPHQLFVNGLACFTVRGSPLKSDVVLNSADGFSASTACQCDYFYSLEKAKLHSGQGPVSWERQQAIKAKVREVFRF*
Ga0137360_115522371	3300012361	Vadose Zone Soil	MKIRPWEIWKARPEDFQADHWFVVISGQERCDAQNLRMVNGLACFTLRGRPGMTDVQLDAADGFSAPTACQCDYLYPLEKSRLHSTQGMVSWERQQQIKGKLRELLRL*
Ga0134052_11140622	3300012393	Grasslands Soil	MKPHQWEAWKCRPPGFERDHWFVVVSGQERCDELRQLLVNALACFTLRGQPLKSEVRLNSADGFESPTVCQCDFLYGLEKSRLHSPLGFVSWERQQQLKARLKEVFRL*
Ga0150984_1197918362	3300012469	Avena Fatua Rhizosphere	MKIRQWEIWKARPADFAADHWFVVISGQERCDAQNLRMVNGLACFTLRGRLSLIDVQLDLADGLSAPTACQCDYLYPLEKVHLHSVQGLVSWERQQQIKGKLKELM
Ga0137394_101489494	3300012922	Vadose Zone Soil	MKIRQWEIWKARPADFNADHWFVVISGQERCDAQNLRMVNGLACFTLRGRLGLMDVQLDAADGLGAPTACQCDYLYPLEKSRLHSAQ
Ga0137359_102266552	3300012923	Vadose Zone Soil	MKIRQWEVWKARPEGFANDHWFVVTSGQERCDAPRLRLVNGLACYTLRGELVPTDVQLDRADGFSAPTACPCDFLYPLEKTKLHSSQGLVSWERQQQIKSKIKELMRL*
Ga0137416_108701543	3300012927	Vadose Zone Soil	MKIYQFEVWKTRPPQFTNDHWFVVISSPERCANPHQLFVNGLACFTLRGDPLKSDVVLNDADGFSASTACQCDYFYSLEKARLHSGQGAVSWERQQAIKTKV
Ga0137404_103360172	3300012929	Vadose Zone Soil	MKIRQWEVWKSRPEGFQTDHWFIIISGQERCDAPNLRLVNGLACFTVRGRVLLTDVRLDGADGFSFPTVCPCDFLYPLEKTKLHSGQGLVSWERQQQIKTKVKELLRL*
Ga0137404_108799482	3300012929	Vadose Zone Soil	MNVRQWEVWKGRPPAFARDHWFVILSAPELGADARQLLVNGLACFSLRGDPGKVEVRLNSADGFPTPTVCDCDFVYVLEKRALHSGLGPVSWERQQAIKAKLKEIFRL*
Ga0137410_104644881	3300012944	Vadose Zone Soil	MKIRQWEVWKARPEGFANDHWFVVTSGQERCDAPRLRLVNGLACYTLRGELVPTDVQLDRADGFSAPTACPCDFLYPLEKTKLHSSQGLVSW
Ga0134077_104740861	3300012972	Grasslands Soil	HQWEAWKCRPPGFERDHWFVVVSGQERCDEPRQLLVNALACFTLRGQPLKSEVRLNSADGFESPTVCQCDFLYGLEKSRLHSPLGFVSWERQQQLKARLKEVFRL*
Ga0134076_100151872	3300012976	Grasslands Soil	MKPHQWEAWKCRPPGFERDHWFVVVSGQERCDEPRQLLVNALACFTLRGQPLKSEVRLNSADGFESPTVCQCDFLYGLEKSRLHSPLGFVSWERQQQLKARLKEVFRL*
Ga0181538_106355722	3300014162	Bog	MKVHQWEVWKTRPVGFETDHWFVVISGQERCDEPRQLMVNALACFTLRGALRKSEVQLDSADGFSAATACQCDYVYGLEKAKLHSGQGFVSWERQQQIKSTVKAVLRF*
Ga0181532_103208492	3300014164	Bog	MKVHQWEVWKTRPAGFETDHWFVVISGQERCDEPRQLMVNALACFTLRGTLRKSEVQLDSADGFPAATACQCDYVYSLEKARLHSGQGFVSWERQQQIKSTLKAVLRL*
Ga0181523_106738572	3300014165	Bog	MRIHQWEIWKTRPPGFESDHWFVVASGEERCNEPRHRLVNGLACFTLRGTLRKTEVQLDSADGFASPTACQCDFLYPLEKSKLHSAQ
Ga0182021_106385933	3300014502	Fen	MKIHQWEVWKACPPGFSKDHWFVIISGQERCDEPRQLYVNGLACFTLRGPLRRTEAQLNSADGFAAPTAVQCDYIYSLEKAALHSSQGLVSWERKERLRSKLKEALRL*
Ga0182021_124536181	3300014502	Fen	WHRARPMKIHQWEIWKTRPPGFESNHWFVVASGQERCNEPRQRMVNGLACFTLRGALSKTDVQLDSAEGFASVTACQCDFLYPLEKSKLHSPQGFVSWERQQLIKSKLREVLRL*
Ga0182027_118601072	3300014839	Fen	MKIHQWEIWKTRPPGFESDHWFVVASGVERCDEPRHRMVNGLACFTLRGTLPKTDVQLDSAEGFAFPTACQCDFLYPLEKSKLHSAQGFVSWERQ
Ga0134089_101464742	3300015358	Grasslands Soil	MNVRQWEVWKCRPPGFERDHWFVILSPQERCDDPRQMLVNGLACFSLRGNPDKVEVRLNSADGFQAATVCDCDFVYVLEKAKLHSAVGPVSWERQQAIKAKLKEVFRL*
Ga0163144_100132617	3300015360	Freshwater Microbial Mat	MNLRQFEIWKCRPPGFERDHWFVIISGNERCDEPRQAFVNGLGCFSLRGNPLKSEVRLNSADGFEAPMVCQCDYLYALPKSALHSSLGVVSWDWQQQIKARLKEVVRF*
Ga0134083_100080291	3300017659	Grasslands Soil	MKPHQWEAWKCRPPGFERDHWFVVVSGQERCDEPRQLLVNALACFTLRGQPLKSEVRLNSADGFESPTVCQCDFLYGLEKSRLHSPLGFVSWERQQQLKARLKEV
Ga0187886_13121011	3300018018	Peatland	MKIHQWEIWKTRPPGFESDHWFVVASGEERCSEPRHRMVNGLACFTLRGALPKTDVQLDSADGLASPTACQCDFLYPLEKSKLHSAQGFVSWERQQLIKSKLREVLRL
Ga0184627_100127223	3300018079	Groundwater Sediment	MKPHQWELWKCRPPGFERDHWFVVVSGQERCDEPRQLLVNALACFTLRGQPLKSEVRLNSADGFESPTVCQCDYLYGLEKSRLHSPLGFVSWERQQQIKARLKEVLRL
Ga0187772_110304422	3300018085	Tropical Peatland	VKLRQFEIWKTRPPDFATDHWFVIISAQERCDESRHLAVNGLACFTLRGQLWKSGVLLNAAEGFGAPTVCQCDFVYGLLKSKLHSCQGTVSGERQQQIKSKLKE
Ga0187769_114474891	3300018086	Tropical Peatland	AGRGPETGSGDVQGQARARQMKIRQFEIWKTRPPDFQTDHWFVVVSPQERCDEFRQIAVNGLACFTLRGAAWKSGVLLNSAEGFSAPTMCQCDFIYGLLKSNLHSCQGMVSWERQQQIKAKLREVFRLL
Ga0187771_108247301	3300018088	Tropical Peatland	MKIRQFEIWKTRPPDFQADHWFVVVSPQERCDESRQIAINGLACFTLRGAAWKSGVLLNSAEGFSAPTMCQCDFIYGLLKSKLHSCQGMVSWERQQQIKAKLREVFRLL
Ga0187770_101213672	3300018090	Tropical Peatland	MRLRPWEIWKARPPGFERDHWFVIVSGQERFDEPRHLVINGLACYTLRGQPLKSEVRLNSADGFDAATVCQCDFFYTIPKAMLHSCFGPVSWERQQQIKGKIKETLRL
Ga0066669_104494902	3300018482	Grasslands Soil	FSRAQEAQGGDGSRASKPDEVKIHQFEVFKGRPPGFQKDHWFVILSHQELCDQPRELVVNGLACFSLRGQPSKVDVRLNSADGFQVPTVCPCDFIYVLEKRALHSSLGLVSWERQQAIKSRLKEVFRL
Ga0163151_100747893	3300020057	Freshwater Microbial Mat	MNLRQFEIWKCRPPGFERDHWFVIISGNERCDEPRQAFVNGLGCFSLRGNPLKSEVRLNSADGFEAPMVCQCDYLYALPKSALHSSLGVVSWDWQQQIKARLKEIVRF
Ga0194113_100414093	3300020074	Freshwater Lake	VKTRQWEVWKCRPEGFERDHWFVIVSGQERCDEPRHLLVNGLACWTLRGDPPKLSVRLSGVDGFQMLTICQCDFIYALPKSGLHSTLGQVSWERQQQIKSRLKEVLRL
Ga0194111_100200552	3300020083	Freshwater Lake	VRTRQWEVWKCRPEGFERDHWFVIVSGQERCDEPRHLLVNGLACWTLRGDPPKLSVRLNGVDGFQMPTICQCDFIYALPKSGLHSTLGQVSWERQQQIKSRLKEVLRL
Ga0194110_103757612	3300020084	Freshwater Lake	VRTRQWEVWKCRPEGFERDHWFVIVSGQERCDEPRHLLVNGLACWTLRGDPPKLSVRLSGVDGFQMLTICQCDFIYALPKSGLHSTLGQVSWERQQQIKSRLKEVLRL
Ga0163150_100199927	3300020195	Freshwater Microbial Mat	MNLRQFEIWKCRPPGFERDHWFVIISGNERCDEPRQAFVNGLGCFSLRGNPLKSEVRLNSADGFEAPMVCQCDYLYALPKSALHSSLGVVSWDWQQQIKARLKEVVRF
Ga0194128_100469943	3300020197	Freshwater Lake	MKVRQWEVWKCRPPGFERDHWFVVVSSQERCDNSRQLLVNGLACFSLRGSPDKVEVRLNSADGFSAPTVCDCDFVYVLEKSKLHSSTGVVSWERQQAIKTKLKEVLRL
Ga0194127_102250033	3300020221	Freshwater Lake	VKTRQWEVWKCRPEGFERDHWFVIVSGQERCDEPRHLLVNGLACWTLRGDPPKLSVRLSGVDGFQMPTICQCDFIYALPKSGLHSTLGQVSWERQQQIKSRLKEVLRL
Ga0194126_100339365	3300020603	Freshwater Lake	VKTRQWEVWKCRPEGFERDHWFVIVSGQERCDEPRHLLVNGLACWTLRGDPPKLSVRLNGVDGFQMPTICQCDFIYALPKSGLHSTLGQVSWERQQQIKSRLKEVLRL
Ga0210397_101895603	3300021403	Soil	MNPRPWEIWKAKPPGFEREHWFVIVSGPERCAEPRQLLLNGLACFTLRGDLRKSEVRLDSVDGFPGVTACQCDFLYSIPKSILHSNIGFVAWERQQQIKNKLKEVFRL
Ga0210409_106795032	3300021559	Soil	MKPRQFEVWKARPEGFQRDHWFVVVSNQERCDEPRQLLVNGLACFTLRGEPLKSEVRLNRADGFTSATVCQCDFLYSLEKSRLHSNQGMVSWERQQAIKAKLKEVLRL
Ga0207667_105360032	3300025949	Corn Rhizosphere	MNPRPWEIWKAKPPGFEREHWFVIISGPERCEEPRQLQLNGLACFTLRGDLRKSEVRLDSADGFPGLTACQCDFLYSIPKSILHSNIGFVAWERQQQIKSKLKEVFRL
Ga0207651_108601572	3300025960	Switchgrass Rhizosphere	RQFEVWKCRPMGFQTDHWFVIVSGQERCDEARQLLVNALACFSLRGAPLKSEVRLNSADGFSAATVCQCDFLYPLEKSKLHSSLGAVSWERQQTIKAKVKEVLRF
Ga0208649_10187542	3300026022	Rice Paddy Soil	MKIHQWEVWKSRPPGFERDHWFVIISGQERCDEPRQLNVNGLACFTLRGPLLKSQVQLNSADGFAAPTALQCDYLYGLEKKGLHSSQGLVSWERQQAIKSKVREVLRF
Ga0209055_10967741	3300026309	Soil	PGIENRDGQSLPKTPAMKIRQWEVWKSRPPGFEKDHWFVLLSGQELCDDSHELLVNGLACWSLRGIPDQLQVRLNSADGFATPTVCDCDFVFALEKSKLHSSLGMVSWERQQAIKAKVKEVFRL
Ga0209154_10410655	3300026317	Soil	MKIRQWEVWKSRPPGFEKDHWFVLLSGQELCDDSHELLVNGLACWSLRGIPDQLQVRLNSADGFATPTVCDCDFVFALEKSKLHSSLGMVSWERQQAIKAKVKEVFRL
Ga0209470_13861591	3300026324	Soil	MKPHQWEVWKCRPPGFERDHWFVVVSGQERCDEPRQLLVNALACFTLRGQPLKSEVRLNSADGFESPTVCQCDFLYGLEKSRLHSPLGFVSWERQQQLKARLKEVFRL
Ga0209804_11372741	3300026335	Soil	QRPPGIENRDGQSLPKTPAMKIRQWEVWKSRPPGFEKDHWFVLLSGQELCDDSHELLVNGLACWSLRGIPDQLQVRLNSADGFATPTVCDCDFVFALEKSKLHSSLGMVSWERQQAIKAKVKEVFRL
Ga0209806_12425101	3300026529	Soil	EKDHWFVLLSGQELCDDSHELLVNGLACWSLRGIPDQLQVRLNSADGFATPTVCDCDFVFALEKSKLHSSLGMVSWERQQAIKAKVKEVFRL
Ga0209058_12707502	3300026536	Soil	RDHWFVVVSGQERCDELRQLLVNALACFTLRGQPLKSEVRLNSADGFESPTVCQCDFLYGLEKSRLHSPLGFVSWERQQQLKARLKEVFRL
Ga0209577_104711872	3300026552	Soil	MKIRQWEIWKARPADFHAHHWFVVISGQERCDAQNLRMVNGLACFSLRGRLSVMDVQLDIADALPAPTACQCDYLYPLEKSRLHSLQGRVSWERQQQIKGKIKELLRL
Ga0207762_10342372	3300027063	Tropical Forest Soil	MKIRQWEVWKARPGDFQTEHWFVVISGQERCDAQNLRMVNGLACFTLRGRPGMMDVPLDAADGFSATTACQCDYLYPLEKSRLHSAQGMVSWERQQQIKGKLRELLRL
Ga0209515_103032433	3300027835	Groundwater	MKPRQWEIWKSRPAGFERDHWFVICSGQERCDEPRQIMVNGLACFTLRGQALKSEVRLDRADGFDAPTVCQCDYLYALEKSPLHSSMGAVSWERQQQIKAKLKEVFRL
Ga0209180_103858001	3300027846	Vadose Zone Soil	MKIYQFEIWKTRPPQFTNDHWFVVISSPERCTNPHQLFVNGLACFTVRGSPLKSDVVLNSADGFSASTACQCDYFYSLEKAKLHSGQGPVSWERQQAIKAKVREVFRF
Ga0209777_101619444	3300027896	Freshwater Lake Sediment	MKIRQFEIWNTRPPDFGTDHWFVVISSQERCDEPRQFAVNGLACFTLRGQLWKSGVLLDAAEGFGAPTVCQCDFLYGLLKSNLHSCQGMVSWERQQQIKSKLREVFRLH
Ga0209777_101747633	3300027896	Freshwater Lake Sediment	MKIHQWEVWKSRPPGFATDHWFVIISGQERCDEPRQLMVNGLACFTLRGRLSKTEVQLNSADGFAGPTALQCDYVYSLEKSKLQAGQGFVSWERQQAVKNKVREVLRF
Ga0265338_102938582	3300028800	Rhizosphere	MAGWTGCRARMKIRQFELWKARPLGFNTDHWFVVIGGQERCDEERYGFVNGLACFSLRGPISRRDIQLDTADGLASPTACQCDYLHPVPKSALHSSLGVVSWERQQQIKAKIKELLRL
Ga0306923_107603151	3300031910	Soil	MKIHQFEVWKARPEGFQRDHWFVVISNEERCAEPRQLMVNGLACFSLRGKPLKSEVRLNSADGFSGPTVCQCDYLYSLEKSRLHSNQGLVSWE
Ga0307479_116125112	3300031962	Hardwood Forest Soil	MKQFEIWKGRPPDFKVDHWFVVISGQERIDDSRAIYVNGLACYTLRGAPRGHDVILDSADGLSAATACQCDYLHPLEKRSVHSSLGQVSWERQQQIKSKIKLLLRL
Ga0315278_118591942	3300031997	Sediment	MNTHQWEIWKTRPPGFESDHWFVIVSGQERCNEPRQRMVNGLACFTWRGALSKADVPLDSADGFTAPTACQCDFLYSVEKAKLHSPQGFVSWE
Ga0315277_104491303	3300032118	Sediment	MKIRQWEIWKARPAGFEADHWFVVLSGQERCDEPRQLLVNGLACFTLRGRLRKSEVQLNSADGFAGPTACQCDFLYALEKSRLHSSQGLVSWERQQQIKSKLKEVLRL
Ga0315276_109388652	3300032177	Sediment	MRIRQWEVWKCRPEGFAREHWFVIVSGQERCDEPRHLLVNGLACWTLRGDPPRLAVRLNAADGFQAPTVCQCDFLYALPKARLHSTLGPVSWERQEQIKSRLKEVLRLF
Ga0315287_128650871	3300032397	Sediment	MRIHQWEVWKSRPPGFNSDHWFVIVSGQERCDEPRQLYVNGLACFTLRGSLGKTEAQLDSADGFAGPTAVQCDYIYSLEKAALHSSQG
Ga0315275_104173172	3300032401	Sediment	PGFEADHWFVIISGQERCDEPRQLMVNGLACFTLRGNLRKSEVQLNSADGFSVPTVCQCDYLYCLEKSRLHSGQGLVSWERQQQIKSILKAVLRF
Ga0335078_124322132	3300032805	Soil	MRIHQWEIWKTRPPGFESDHWFVVASGEERCAEPRQRMVNGLACFTLRGNLAKTDVQLDAADGFASPTACQCDFLYPLEKAKLHSAHGFVSWERQQSIKSKLREVLRL
Ga0335077_119100281	3300033158	Soil	MKIRQFEIWKTRPPDFETDHWFVVISGQERCDEPRHLAVNGLACFTLRGSLWKSGVRLDAAEGFGAPTVCQCDFFYGLLKSRLHSCQGTVSWERQQQIKTKLKE
Ga0326728_102889482	3300033402	Peat Soil	MKIHQWEIWKTRPPGFESDHWFVVASGQERCNEPRHRMVNGLGCFTLRGTLTKTDVQLDSADGFASPTACQCDFLYPLEKSKLHSAQGFVSWERQQLIKSKLREVLRL
Ga0326728_107801661	3300033402	Peat Soil	PPGFESDHWFVVASGEERCNEPRHRMVNGLACFTLRGTLPKTDVQLDSADGFASPTACQCDFLYPLEKSKLHSAQGFVSWERQQLIKSKLREVLRL
Ga0326728_108924092	3300033402	Peat Soil	MRIHQWEIWKTRPPGFESDHWFVVASGEERCAAPRQRMVNGLACFTLRGNLAKTDVRLDAADGFASPTACQCDFLYPLEKAKLHSAQGFVSWERQQSIKSKLREILRL
Ga0314861_0052199_963_1292	3300033977	Peatland	MRIHQLEIWKTRPPDFQTDHWFVVISPQERCDEPRQAAVNGLACFTLRGAAWKSGVPLNSAEGFSPPAMCQCDFIYGLLKSKLRSCQGMASWERQQQIKAKLREVFRLL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085424

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences