NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F085426

Metagenome / Metatranscriptome Family F085426

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F085426
Family Type Metagenome / Metatranscriptome
Number of Sequences 111
Average Sequence Length 69 residues
Representative Sequence VQLAREGGVPEAWRDLDCDGKVSWAEWLRGGIDFRLRPSQLVPGCQDVYAVKTGRAMVVRCEAAPQCRLARDLLK
Number of Associated Samples 89
Number of Associated Scaffolds 111

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 21.82 %
% of genes near scaffold ends (potentially truncated) 73.87 %
% of genes from short scaffolds (< 2000 bps) 83.78 %
Associated GOLD sequencing projects 76
AlphaFold2 3D model prediction Yes
3D model pTM-score0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (83.784 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(37.838 % of family members)
Environment Ontology (ENVO) Unclassified
(48.649 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(62.162 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 15.53%    β-sheet: 19.42%    Coil/Unstructured: 65.05%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.58
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 111 Family Scaffolds
PF02661Fic 37.84
PF00478IMPDH 20.72
PF04879Molybdop_Fe4S4 13.51
PF04014MazE_antitoxin 2.70
PF06808DctM 2.70
PF01627Hpt 2.70
PF00999Na_H_Exchanger 1.80
PF08241Methyltransf_11 0.90
PF09335SNARE_assoc 0.90
PF03480DctP 0.90

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 111 Family Scaffolds
COG0025NhaP-type Na+/H+ or K+/H+ antiporterInorganic ion transport and metabolism [P] 1.80
COG0475Kef-type K+ transport system, membrane component KefBInorganic ion transport and metabolism [P] 1.80
COG3004Na+/H+ antiporter NhaAEnergy production and conversion [C] 1.80
COG3263NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domainsEnergy production and conversion [C] 1.80
COG4651Predicted Kef-type K+ transport protein, K+/H+ antiporter domainInorganic ion transport and metabolism [P] 1.80
COG0398Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 familyFunction unknown [S] 0.90
COG0586Membrane integrity protein DedA, putative transporter, DedA/Tvp38 familyCell wall/membrane/envelope biogenesis [M] 0.90
COG1238Uncharacterized membrane protein YqaA, VTT domainFunction unknown [S] 0.90

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms83.78 %
UnclassifiedrootN/A16.22 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001089|JGI12683J13190_1015552All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300001545|JGI12630J15595_10007590All Organisms → cellular organisms → Bacteria2351Open in IMG/M
3300002908|JGI25382J43887_10464565All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300005171|Ga0066677_10816417All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium515Open in IMG/M
3300005175|Ga0066673_10000474All Organisms → cellular organisms → Bacteria11799Open in IMG/M
3300005175|Ga0066673_10407597All Organisms → cellular organisms → Bacteria795Open in IMG/M
3300005177|Ga0066690_11045760All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium510Open in IMG/M
3300005178|Ga0066688_10184594All Organisms → cellular organisms → Bacteria1319Open in IMG/M
3300005180|Ga0066685_10642131All Organisms → cellular organisms → Bacteria730Open in IMG/M
3300005184|Ga0066671_10096596All Organisms → cellular organisms → Bacteria1629Open in IMG/M
3300005187|Ga0066675_10017998All Organisms → cellular organisms → Bacteria3923Open in IMG/M
3300005187|Ga0066675_10331470All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei → Burkholderia pseudomallei 1710b1108Open in IMG/M
3300005330|Ga0070690_100914928All Organisms → cellular organisms → Bacteria687Open in IMG/M
3300005332|Ga0066388_102844990All Organisms → cellular organisms → Bacteria884Open in IMG/M
3300005444|Ga0070694_101305408All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium610Open in IMG/M
3300005446|Ga0066686_10095644All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1905Open in IMG/M
3300005451|Ga0066681_10005295All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus5940Open in IMG/M
3300005454|Ga0066687_10498387All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium720Open in IMG/M
3300005467|Ga0070706_101336779All Organisms → cellular organisms → Bacteria657Open in IMG/M
3300005552|Ga0066701_10218676All Organisms → cellular organisms → Bacteria1172Open in IMG/M
3300005552|Ga0066701_10964156Not Available504Open in IMG/M
3300005555|Ga0066692_10744843Not Available605Open in IMG/M
3300005557|Ga0066704_10926869All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300005558|Ga0066698_10313285All Organisms → cellular organisms → Bacteria1086Open in IMG/M
3300005560|Ga0066670_10165898All Organisms → cellular organisms → Bacteria1303Open in IMG/M
3300005560|Ga0066670_10319033All Organisms → cellular organisms → Bacteria946Open in IMG/M
3300005561|Ga0066699_10304748All Organisms → cellular organisms → Bacteria1134Open in IMG/M
3300005561|Ga0066699_10936308All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300005561|Ga0066699_11186974All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300005566|Ga0066693_10003592All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales3885Open in IMG/M
3300005568|Ga0066703_10511941All Organisms → cellular organisms → Bacteria711Open in IMG/M
3300005568|Ga0066703_10876969All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium512Open in IMG/M
3300005569|Ga0066705_10134300Not Available1506Open in IMG/M
3300005575|Ga0066702_10106220Not Available1612Open in IMG/M
3300005575|Ga0066702_10172697All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales1293Open in IMG/M
3300005575|Ga0066702_10485109All Organisms → cellular organisms → Bacteria754Open in IMG/M
3300005646|Ga0075040_1781741All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium969Open in IMG/M
3300006031|Ga0066651_10012769All Organisms → cellular organisms → Bacteria3452Open in IMG/M
3300006031|Ga0066651_10066523All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1731Open in IMG/M
3300006034|Ga0066656_10624220All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium696Open in IMG/M
3300006034|Ga0066656_10837588All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium589Open in IMG/M
3300006046|Ga0066652_100165140All Organisms → cellular organisms → Bacteria1871Open in IMG/M
3300006797|Ga0066659_10093438All Organisms → cellular organisms → Bacteria2028Open in IMG/M
3300006800|Ga0066660_10343628All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1209Open in IMG/M
3300006804|Ga0079221_10643399Not Available725Open in IMG/M
3300006904|Ga0075424_100580525All Organisms → cellular organisms → Bacteria1197Open in IMG/M
3300006914|Ga0075436_100883186All Organisms → cellular organisms → Bacteria668Open in IMG/M
3300006954|Ga0079219_11356613Not Available631Open in IMG/M
3300007255|Ga0099791_10441105All Organisms → cellular organisms → Bacteria629Open in IMG/M
3300007265|Ga0099794_10341576All Organisms → cellular organisms → Bacteria778Open in IMG/M
3300007788|Ga0099795_10072235All Organisms → cellular organisms → Bacteria1304Open in IMG/M
3300009012|Ga0066710_100629737All Organisms → cellular organisms → Bacteria1630Open in IMG/M
3300009012|Ga0066710_102080918All Organisms → cellular organisms → Bacteria836Open in IMG/M
3300009137|Ga0066709_100521697All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1677Open in IMG/M
3300009137|Ga0066709_101017583All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1214Open in IMG/M
3300009162|Ga0075423_11150276All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium827Open in IMG/M
3300010303|Ga0134082_10146343All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria953Open in IMG/M
3300010321|Ga0134067_10266686All Organisms → cellular organisms → Bacteria → Proteobacteria650Open in IMG/M
3300010360|Ga0126372_10687089All Organisms → cellular organisms → Bacteria997Open in IMG/M
3300011271|Ga0137393_10829169All Organisms → cellular organisms → Bacteria790Open in IMG/M
3300012202|Ga0137363_10082888All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2394Open in IMG/M
3300012203|Ga0137399_10415507All Organisms → cellular organisms → Bacteria1123Open in IMG/M
3300012203|Ga0137399_11654129Not Available528Open in IMG/M
3300012205|Ga0137362_10343322All Organisms → cellular organisms → Bacteria1293Open in IMG/M
3300012205|Ga0137362_10416185All Organisms → cellular organisms → Bacteria1164Open in IMG/M
3300012208|Ga0137376_10084255All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales2671Open in IMG/M
3300012363|Ga0137390_11480652Not Available620Open in IMG/M
3300012582|Ga0137358_10133606All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales1688Open in IMG/M
3300012582|Ga0137358_10776683All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium638Open in IMG/M
3300012917|Ga0137395_10318537All Organisms → cellular organisms → Bacteria1104Open in IMG/M
3300012924|Ga0137413_10356372Not Available1040Open in IMG/M
3300012929|Ga0137404_11614683All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium601Open in IMG/M
3300015052|Ga0137411_1356912Not Available4463Open in IMG/M
3300015053|Ga0137405_1003539All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales995Open in IMG/M
3300015053|Ga0137405_1005923All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales1335Open in IMG/M
3300015053|Ga0137405_1005924All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales1335Open in IMG/M
3300015242|Ga0137412_10387391Not Available1083Open in IMG/M
3300015264|Ga0137403_10456762All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1152Open in IMG/M
3300018027|Ga0184605_10047124All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1825Open in IMG/M
3300018433|Ga0066667_10092262All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1988Open in IMG/M
3300018482|Ga0066669_10050021All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales2633Open in IMG/M
3300019789|Ga0137408_1151217All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales6417Open in IMG/M
3300019789|Ga0137408_1388415All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1946Open in IMG/M
3300024330|Ga0137417_1236634All Organisms → cellular organisms → Bacteria782Open in IMG/M
3300026308|Ga0209265_1064040All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei → Burkholderia pseudomallei 1710b1104Open in IMG/M
3300026316|Ga0209155_1143503All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium807Open in IMG/M
3300026318|Ga0209471_1127824All Organisms → cellular organisms → Bacteria1075Open in IMG/M
3300026335|Ga0209804_1054340All Organisms → cellular organisms → Bacteria1942Open in IMG/M
3300026524|Ga0209690_1031719All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales2529Open in IMG/M
3300026527|Ga0209059_1110758All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1078Open in IMG/M
3300026536|Ga0209058_1212610Not Available769Open in IMG/M
3300026538|Ga0209056_10021275All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales6325Open in IMG/M
3300026542|Ga0209805_1216752All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria808Open in IMG/M
3300026551|Ga0209648_10390689All Organisms → cellular organisms → Bacteria922Open in IMG/M
3300026551|Ga0209648_10518204Not Available681Open in IMG/M
3300026552|Ga0209577_10277075All Organisms → cellular organisms → Bacteria → Proteobacteria1258Open in IMG/M
3300026557|Ga0179587_10791009Not Available625Open in IMG/M
3300027603|Ga0209331_1136755Not Available586Open in IMG/M
3300027651|Ga0209217_1003842All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria5013Open in IMG/M
3300027655|Ga0209388_1175572All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300027678|Ga0209011_1157429Not Available636Open in IMG/M
3300027727|Ga0209328_10061729All Organisms → cellular organisms → Bacteria1149Open in IMG/M
3300027903|Ga0209488_10039480All Organisms → cellular organisms → Bacteria3456Open in IMG/M
3300027903|Ga0209488_11179748All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300028536|Ga0137415_10275172All Organisms → cellular organisms → Bacteria1489Open in IMG/M
3300028536|Ga0137415_10485617Not Available1042Open in IMG/M
3300031740|Ga0307468_100526678All Organisms → cellular organisms → Bacteria945Open in IMG/M
3300032180|Ga0307471_103238701All Organisms → cellular organisms → Bacteria577Open in IMG/M
3300032770|Ga0335085_10015377All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria11106Open in IMG/M
3300033433|Ga0326726_10551512All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter1105Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil37.84%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil27.93%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil9.01%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil5.41%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil3.60%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.70%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.80%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.80%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.80%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.80%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.90%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.90%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.90%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil0.90%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.90%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.90%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.90%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001089Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3EnvironmentalOpen in IMG/M
3300001545Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1EnvironmentalOpen in IMG/M
3300002908Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005646Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_057 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010321Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015052Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015053Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300026295Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026308Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)EnvironmentalOpen in IMG/M
3300026316Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)EnvironmentalOpen in IMG/M
3300026318Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)EnvironmentalOpen in IMG/M
3300026335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)EnvironmentalOpen in IMG/M
3300026524Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)EnvironmentalOpen in IMG/M
3300026527Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)EnvironmentalOpen in IMG/M
3300026536Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027603Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027651Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027678Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027727Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12683J13190_101555213300001089Forest SoilAVEWLRGGIDFRLRPSALVAGCQDIYAVKSGAPVVVRCPDPPQCRIARDLLK*
JGI12630J15595_1000759023300001545Forest SoilVPGAWRDLDCDGKVSWAEWLRGGIDFRLRPSELVPGCRDVYAVKTGRAMVVRCEAAPQCRQARDLVK*
JGI25382J43887_1046456513300002908Grasslands SoilDALRDLNCDGKVSPAEWLRGGIDFRLRPSQLVPGCQDVYSVKSGQVLVVRCEEEPRCRRAADLRPPR*
Ga0066677_1081641713300005171SoilFLLSGIRAVQLAREGEVPEAWRDLNCDGKVSWAEWLRGGIDFRLRPSELVPGCQDVYAVKTGRALVVRCEAAPQCRLARDVPK*
Ga0066673_1000047473300005175SoilVQLAREGEVPEAWRDLNCDGKVSWAEWLRGGIDFRLRPSQLVPGCQDVYAVKTGKALVVRCEAAPQCRLARGLPK*
Ga0066673_1040759733300005175SoilCDGKVSWAEWLRGGIDFRLRPSQLVPGCKEVYAVKTGRAMVVRCETAPQCRLARDLLK*
Ga0066690_1104576013300005177SoilLLSGIRAVQLAREGEVPEAWRDLNCDGKVSWAEWLRGGIDFRLRPSQLVPGCQDVYAVKTGRALVVRCEAPPQCRRSRDVLK*
Ga0066688_1018459433300005178SoilLSGIRAVQLAREGEVPEAWRDLNCDGKVSWAEWLRGGIDFRLRPSQLVPGCQDVYAVKTGRALVVRCEAPPQCRRSRDVLK*
Ga0066685_1064213113300005180SoilCDGKVSWAEWLRGGIDFRLRPSKLVPGCQDVYAVKTGRALVVRCEAAPQCRLARDVLK*
Ga0066671_1009659623300005184SoilVQLAREGEVPEAWRDLNCDGKVSWAEWLRGGIDFRLRPSELIPGCQDVYAVKTGRALVVRCEAAPQCRRSRDVLK*
Ga0066675_1001799813300005187SoilAREGEVPEAWRDLNCDGKVSWAEWLRGGIDFRLRPSQLVPGCQDVYAVKTGKALVVRCEAAPQCRLARGLPK*
Ga0066675_1033147023300005187SoilVQLAREGEVPEAWRDLDCDGKVSWAEWLRGGIDFRLRPSQLVPGCKEVYAVKTGRAMVVRCETTPQCRLARDLLK*
Ga0070690_10091492823300005330Switchgrass RhizosphereFRDLDCDGQVSNTEWLRGGIDFRLRPSTLVPGCQDVYHVKSGATLVVRCDQPPVCRLARDLVKP*
Ga0066388_10284499033300005332Tropical Forest SoilRAVQLAREGEVPDALRDLDCDGKVSLAEWLRGGIDFRLRPSQLVPGCQDVYAAKSGQVLVVRCTAEPRCRRAADLHRSR*
Ga0070694_10130540823300005444Corn, Switchgrass And Miscanthus RhizosphereCDGKVGWAEWLRGGIDFRLRPSELVPGCQDVYAVKTGRAMVVRCDAPPQCRRVRDLTKEE
Ga0066686_1009564443300005446SoilVQLAREGEVPEAWRDLDCDGKVSWAEWLRGGIDFRLRPSQLVPGCQDVYAVKTGRALVVRCEAAPQCRRSRDVLK*
Ga0066681_1000529573300005451SoilVQLAREGEVPEAWRDLNCDGKVSWAEWLRGGIDFRLRPSQLVPGCQDVFAVKTGRALVVRCEAAPQCRRARDLTK*
Ga0066687_1049838723300005454SoilVQLAREGEVPEAWRDLNCDGKVSWAEWLRGGIDFRLRPSELVPGCQEVYAVKTGRALVVRCEAAPQCRLARDVPK
Ga0070706_10133677923300005467Corn, Switchgrass And Miscanthus RhizosphereLEWLRGGIDFRMRPSQLVPGCQDVYAVKTGRALVVRCDAAPQCRLARDFEKANQR*
Ga0066701_1021867633300005552SoilRDLDCDGKVSWAEWLRGGIDFRLRPSQLVPGCQDVYAVKTGRALVVRCEAAPQCRRARDVLK*
Ga0066701_1096415613300005552SoilRDLDCDGKVSWAEWLRGGIDFRLRPSQLVPGCQDVYAVKTGRALVVRCEAAPQCRRSRDVLK*
Ga0066692_1074484323300005555SoilVQLAREGEVPEAWRDLDCDGKVSWAEWLRGGIDFRLRPSQLVPGCQDVYAVKTGRALVVRCEAPPQCRR
Ga0066704_1092686923300005557SoilFRDLDCDGRTSWLEWLRGGIDFRLRPSQLVPGCQDVYAAKTGKALVVRCETAPRCRLARDVVK*
Ga0066698_1031328523300005558SoilVQLAREGEVPEAWRDLNCDGKVSWAEWLRGGIDFRLRPSQLVPGCQDVYAVKTGRALVVRCEAAPQCRRSRDVLK*
Ga0066670_1016589813300005560SoilRAVQLAREGEVPAGMRDLDCDGKVSPIEWLRGGIDFRVRPSQLVAGCTDVYAVKSGAPVVVRCAQPPQCRLARDLLPK*
Ga0066670_1031903333300005560SoilEVPEAWRDLDCDGKVSWAEWLRGGIDFRLRPSQLVPGCQDVYAVKTGRALVVRCEAAPQCRLARDVLR*
Ga0066699_1030474813300005561SoilAGLRAVQLAKEGDLPGELRDLNCDGKVSPAEWLRGGIDFRLRPSTLVSGCKDVYAVKTGQVLVVRCLQEPRCLRAADLQRSR*
Ga0066699_1093630823300005561SoilAREGEVPEAWRDLNCDGKVSWAEWLRGGIDFRLRPSQLVPGCQDVYAVKTGRALVVRCEAPPQCRRSRDVLK*
Ga0066699_1118697413300005561SoilPGMRDLDCDGKVSPIEWLRGGIDFRLRPSQLVAGCTDIYAVKSGAPVVVRCPQPPQCRLARDLLPK*
Ga0066693_1000359253300005566SoilVQLAREGEVPEAWRDLDCDGKVSWAEWLRGGIDFRLRPSQLVPGCQDVYAVKTGKALVVRCEAAPQCRLARGLPK*
Ga0066703_1051194113300005568SoilEGEVPEAFRDLDCDGKTSLLEWLRGGIDFRMRPSQLVPGCLDVYAVKTGRALVVRCEAAPQCRLARDIGKANQR*
Ga0066703_1087696913300005568SoilVQLAREGEVPEAWRDLNCDGKVSWAEWLRGGIDFRLRPSQLVPGCQDVYALKTGRAMVVRCEAAPQCR
Ga0066705_1013430013300005569SoilPDELRDLDCDGKVSPAEWLRGGIDFRLRPSQAVAGCQDVYAAKSGRTLVVRCPTEPRCRRALPEPSR*
Ga0066702_1010622033300005575SoilDGKVSPAEWLRGGIDFRLRPSQAVAGCQDVYAAKSGRTLVVRCPTEPRCRRALPEPSR*
Ga0066702_1017269723300005575SoilVQLAREGEVPEAWRDLNCDGKVSWAEWLRGGIDFRLRPSQLVPGCQDVYAVKTGRALVVRCEAPPQCRRSRDVLK*
Ga0066702_1048510923300005575SoilEWLRGGIDFRLRPSQLVPGCQDVYAAKTGKALVVRCEAAPRCRLARDIVK*
Ga0075040_178174123300005646Permafrost SoilPEAFRDLNCDGKISYAEWLRGGIDFRLRPSKLVEGCQDVFMVKSEEAVVVRCEAAPQCRLVHDLKR*
Ga0066651_1001276913300006031SoilWRDMDCDGKVSWAEWLRGGIDFRLRPSQLVPGCQDVYAVKTGKALVVRCEAAPQCRLARGLPK*
Ga0066651_1006652353300006031SoilDLDCDGKVSWAEWLRGGIDFRLRPSELAPGCQDVYAVKTGRAMVVRCEAAPQCRKARDLVK*
Ga0066656_1062422023300006034SoilFLLSGIRAVQLAREGEVPEAWRDLNCDGKVSWAEWLRGGIDFRLRPSQLVPGCQDVYAVKTGKALVVRCEAAPQCRLARGLPK*
Ga0066656_1083758823300006034SoilMRAAQLAREGEVPDAFRDLDCDGKTSLLEWLRGGIDFRMRPSQLVPGCQDVYAVKTGRALVVRCEAAPQCRLARDVGKTNQR*
Ga0066652_10016514053300006046SoilCDGKVSWAEWLRGGIDFRLRPSQLVPGCQDVYAVKTGKALVVRCEAAPQCRLARGLPK*
Ga0066659_1009343843300006797SoilWAEWLRGGIDFRLRPSTLVAGCQDVYAVKTGRALVVRCEAAPQCRRARELVK*
Ga0066660_1034362813300006800SoilVQLAREGEVPEAWRDLNCDGKVSWAEWLRGGIDFRLRPSELVPGCQEVYAVKTGRALVVRCEAAPQCRRSRD
Ga0079221_1064339933300006804Agricultural SoilAREGDVPEAFRDLDCDGEISWTEWLRAGIDFRLRPSQLVQGCQDVYAVKSGQVLVVRCETAPRCRLARDLIRPPARSP*
Ga0075424_10058052523300006904Populus RhizosphereVRAVQLAREGGVPEAWRDLDCDGKVSWAEWLRGGIDFRLRPSQLVPGCQDVYAVKTGRAMVVRCEAAPQCRLARDLLK*
Ga0075436_10088318623300006914Populus RhizosphereLRAVQLAREGEVPSELRDLDCNGKVSPAEWLRGGIDFRLRPSQLVPGCQDVYAAKSGQVLVVRCAEEPRCRRAADLQRSR*
Ga0079219_1135661313300006954Agricultural SoilEWLRGGIDFRLRPSQLVAGCQDVYAVKGGAVFVVRCESPPQCRLARDVIRK*
Ga0099791_1044110513300007255Vadose Zone SoilKVSWAEWLRGGIDFRLRPSELVPGCQEVYHVKSGQTLVVRCEAAPQCRRARNLVK*
Ga0099794_1034157613300007265Vadose Zone SoilGKVSWAEWLRGGIDFRVRPSQLVPGCHDVYAVKTGRVMVLRCEAPPKCRNMRHLLK*
Ga0099795_1007223513300007788Vadose Zone SoilMAGVRAFQLAREGEVPDALRDLNCDGKVSPAEWLRGGIDFRLRPSQLVPGCQDVYAVKSGQVLVVRCPDEPRCRRAADLRPSR*
Ga0066710_10062973713300009012Grasslands SoilRGGIDFRMRPSQLVPGCQDVYAVKTGRALVVRCEAAPQCRLARDIGKANQR
Ga0066710_10208091833300009012Grasslands SoilDCDGKTSVLEWLRGGIDFRMRPSQLVPGCQDVYAVKTGRALVVRCEAAPQCRLARDIGRADQR
Ga0066709_10052169753300009137Grasslands SoilDLNCDGKVSWAEWLRGGIDFRLRPSQLVPGCQDVYAVKTGKALVVRCEAAPQCRLARGLPK*
Ga0066709_10101758343300009137Grasslands SoilDLNCDGKVSWAEWLRGGIDFRLRPSQLVPGCQDVYAVKTGRALVVRCEAPPQCRRSRDVLK*
Ga0075423_1115027623300009162Populus RhizosphereVQLAREGGVPEAWRDLDCDGKVSWAEWLRGGIDFRLRPSQLVPGCQDVYAVKTGRAMVVRCEAAPQCRLARDLLK
Ga0134082_1014634323300010303Grasslands SoilLSGIRAVQLAREGEVPEAWRDLNCDGKVSWAEWLRGGIDFRLRPSQLVPGCQDVYAVKTGKALVVRCEAAPQCRLARGLPK*
Ga0134067_1026668623300010321Grasslands SoilLSGIRAVQLAREGEVPEAWRDLDCDGKVSWAEWLRGGIDFRLRPSQLVPGCQDVYAVKTGKALVVRCEAAPQCRLARGLPK*
Ga0126372_1068708933300010360Tropical Forest SoilALFLLAGLRAVQLAREGEVPEELRDLDCDGKVSPAEWLRGGIDFRLRSSQIVPGCQDVYAAKSGQVLVVRCPDEPRCRRQGSR*
Ga0137393_1082916923300011271Vadose Zone SoilLAAEGEVPADLRDLDCDGKVSPVEWLRGGIDFRLRPSQLVPGCQDVVMVKTGAPVTVRCAQPPVCRLARDLLRRG*
Ga0137363_1008288853300012202Vadose Zone SoilEWLRGGIDFRLRPSELVPGCTDVYAVNTGRALVVRCEAPPQCRRARDLIK*
Ga0137399_1041550743300012203Vadose Zone SoilWAEWLRGGIDFRLRPSELVPGCRDVYAVKTGRAMVVRCEAAPQCRRARDLVK*
Ga0137399_1165412913300012203Vadose Zone SoilDGKVSWAEWLRGGIDFRVRPSQLVPGCQDVYAVKTGRVMVLRCEAPPKCRNMRDLLK*
Ga0137362_1034332213300012205Vadose Zone SoilVQLAREGDVPEAFRDLDCDGKVSWAEWLRGGIDFRLRPSELVPGCTDVYAVNTGRALVVRCEAPPQCRRARDLIK*
Ga0137362_1041618513300012205Vadose Zone SoilAVQLAREGEVPEAWRDLDCDGKVSWAEWLRGGIDFRVRPSQLAPGCQDVYAVKTGRVMVLRCEAPPKCRSMRDLLK*
Ga0137376_1008425553300012208Vadose Zone SoilLSGIRAVQLAREGEVPEAWRDLNCDGKVSWAEWLRAGIDFRLRPSQLVPGCQDVYAVKTGRAMVVRCEAAPQCRTARNVLK*
Ga0137390_1148065213300012363Vadose Zone SoilLAGESDVPADFRDLDCDGKVSPIEWLRGGIDFRVRPSQLVAGCQEVYAVKTGVPIVVRCPQPPVCRLARDLLK*
Ga0137358_1013360633300012582Vadose Zone SoilLAREGDVPEAWRDLDCDGKVGWAEWLRGGIDFRARPSEIVPGCQDVYAVKTGRVMVLRCEAPPKCRNMRDLLK*
Ga0137358_1077668313300012582Vadose Zone SoilEAWRDLDCDGKVGWAEWLRGGIDFRVRPSEIVPGCQDVYAVKTGRALVVRCEAAPQCRRARDLVK*
Ga0137395_1031853743300012917Vadose Zone SoilTGLRAVQLAREGEVPAAWRDLDCDGKVSWAEWLRGGIDFRVRPSQLVPGCQDVYAVKTGRVMVLRCEAAPKCRSMRDLLK*
Ga0137413_1035637243300012924Vadose Zone SoilWRDLDCDGKVSWAEWLRGGIDFRVRPSQLVPGCQDVYAVKTGRVMVLRCEAAPKCRSMRDLLK*
Ga0137404_1161468323300012929Vadose Zone SoilSGLRAVQLAREGDVPYAWRDLDCDGKVGWAEWLRGGIDFRLRPSELVPGCQDVYAVKTGRAMVVRCEAAPQCRRARDLIK*
Ga0137411_135691273300015052Vadose Zone SoilLRAVQLAREGEVPEAWRDLDCDGKVSWAEWLRGGIDFRLRPSQLVPGCQDVYAVKTGRVMVLRCETAPKCRSARDLVK*
Ga0137405_100353933300015053Vadose Zone SoilCDGKVSWAEWLRGGIDFRVRPSQLAPGCQDVYAVKTGRVMVLRCEAPPKCRSMRDLLK*
Ga0137405_100592333300015053Vadose Zone SoilWLRGVIDFRVRPSQLASGCQDVYAVKTGRVMVLRCEAPPKCRSMRDLLK*
Ga0137405_100592413300015053Vadose Zone SoilDGKVSWAEWLRGGIDFRVRPSQLAPGCQDVYAVKTGRVMVLRCEAPPKCRSMRDLLK*
Ga0137412_1038739113300015242Vadose Zone SoilEGEVPAAWRDLDCDGKVSWAEWLRGGIDFRVRPSQLVPGCQDVYAVKTGRVMVLRCEAAPKCRSMRDLLK*
Ga0137403_1045676213300015264Vadose Zone SoilTGFRAVQLAREGEVPEGWRDLDCDGKVSWAEWLRGGIDFRLRPSQLAPGCQDVYAVKTGRVMVLRCEAAPKCRSARDLVK*
Ga0184605_1004712443300018027Groundwater SedimentVQLAREGEVPEAWRDLDCDGKVSWAEWLRGGIDFRVRPSQAVPGCQEVYAVKTGRALVVRCEAAPQCRLARDVLK
Ga0066667_1009226223300018433Grasslands SoilVQLAREGEVPEAWRDLDCDGKVSWGEWLRGGIDFRLRPSQLVPGCQDVYAVKTGRALVVRCEAPPQCRRSRDVLK
Ga0066669_1005002153300018482Grasslands SoilVQLAREGEVPEAWRDLNCDGKVSWAEWLRGGIDFRLRPSQLVPGCQDVYAVKTGKALVVRCEAAPQCRLARGLPK
Ga0137408_115121783300019789Vadose Zone SoilLAREGEVPEGWRDLDCDGKVSWAEWLRGGIDFRLRPSELVPGCQDVYAVKTGRAMVVRCEAAPQCRRARDVFK
Ga0137408_138841533300019789Vadose Zone SoilVRAFQLAREGEVPDALRDLNCDGKVSPAEWLRGGIDFRLRPSQLVPGCQDVYSVKSGQVLVVRCEEEPRCRRAADLRPPR
Ga0137417_123663423300024330Vadose Zone SoilLEWLRGGIDFRMRPSQLVPGCQDVYAVKTGRALVVRCEAAPQCRLARDIGEANQR
Ga0209234_104699313300026295Grasslands SoilGGIDFRMRPSQLVPGCQDVYAVKTGRALVVRCEAAPQCRLARDIGKANQR
Ga0209265_106404013300026308SoilVQLAREGEVPEAWRDLNCDGKVSWAEWLRGGIDFRLRPSQLVPGCQDVYAVKTGKALVVRCEAA
Ga0209155_114350313300026316SoilAVRAVQLAREGEVPEAWRDLDCDGKVSWAEWLRGGIDFRLRSSELVPGCQDVYAVKTGRAMVVRCEAAPQCRLHAAGRLTWSWWP
Ga0209471_112782413300026318SoilIRAVQLAREGEVPEDFRDLDCDGRTSWVEWLRGGIDFRLRPSQLVPGCQDVYAAKTGKALVVRCEAAPRCRLARDIVK
Ga0209804_105434013300026335SoilAVQLAREGEVPEAFRDLDCDGKTSVLEWLRGGIDFRMRPSQLVPGCQDVYAVKTGRALVVRCEAAPQCRLARDIGGADQR
Ga0209690_103171933300026524SoilVQLAREGEVPEAWRDLDCDGKVSWAEWLRGGIDFRLRPSQLVPGCQDVYAVKTGRALVVRCEAAPQCRRSRDVLK
Ga0209059_111075823300026527SoilLSGIRAVQLAREGEVPEAWRDLNCDGKVSWAEWLRGGIDFRLRPSQLVPGCQDVYAVKTGRALVVRCEAPPQCRRSRDVLK
Ga0209058_121261023300026536SoilVQLAREGEVPEAWRDLNCDGKVSWAEWLRGGIDFRLRPSQLVPGCQDVYAVKTGKALVVRGEAAPQCR
Ga0209056_1002127583300026538SoilVQLAREGEVPEAWRDLNCDGKVSWAEWLRGGIDFRLRPSQLVPGCQDVYAVKTGRALVVRCEAAPQCRLARGLPK
Ga0209805_121675223300026542SoilVQLAREGEVPEAWRDLNCDGKVSWAEWLRGGIDFRLRPSQLVPGCQDVYAVKTGRALVVRCEAPPQCRRSRDVLK
Ga0209648_1039068933300026551Grasslands SoilLRDLDCDGKVSPVEWLRGGIDFRLRPSQLVPGCEDVYMVKTGAPVVVRCAAAPRCRLARDLLPK
Ga0209648_1051820413300026551Grasslands SoilVPAALRDLDCDGTVSAVEWLRGGIDFRLRPSALVSGCQDIYAVKSGAPLVVRCPDPPQCRLARDLLK
Ga0209577_1027707513300026552SoilVQLAREGEVPEAWRDLNCDGKVSWAEWLRGGIDFRLRPSQLVPGCQDVYAVKTGMALVVRCEAPPQCRRSRDVLK
Ga0179587_1079100923300026557Vadose Zone SoilCDGKVSWAEWLRGGIDFRVRPSQLVPGCQDVYAVKTGRVMVLRCEAAPKCRSMRDLLK
Ga0209331_113675513300027603Forest SoilDLDCDGKVSWAEWLRGGIDFRLRPSELVPGCRDVYAVKTGRAMVVRCEAAPQCRQARDLV
Ga0209217_100384233300027651Forest SoilVQLAQEGEVPGAWRDLDCDGKVSWAEWLRGGIDFRLRPSELVPGCRDVYAVKTGRAMVVRCEAAPQCRQARDLVK
Ga0209388_117557223300027655Vadose Zone SoilDLDCDGKVSWAEWLRGGIDFRLRPSELVPGCQDVYAVKTGRVMVLRCEAPPKCRNMRHLL
Ga0209011_115742913300027678Forest SoilAVQLAQEGEVPEAWRDLDCDGKVSWAEWLRGGIDFRLRPSELVPGCRDVYAVKTGRAMVVRCEAAPQCRKASDLVR
Ga0209328_1006172913300027727Forest SoilEWLRGGIDFRLRPSELVPGCRDVYAVKTGRAMVVRCEAAPQCRQARDLVK
Ga0209488_1003948023300027903Vadose Zone SoilMAGVRAFQLAREGEVPDALRDLNCDGKVSPAEWLRGGIDFRLRPSQLVPGCQDVYAVKSGQVLVVRCPDEPRCRRAADLRPSR
Ga0209488_1117974813300027903Vadose Zone SoilVPEAFRDLDCDGKVSWVEWLRGGIDFRLRPSELVPGCQDVYAVKTGRAMVVRCEAAPQCRRARDLIK
Ga0137415_1027517213300028536Vadose Zone SoilGKTSLLEWLRGGIDFRMRPSQLVPGCQDVYAVKTGRALVVRCEAAPQCRLARDIGEANQR
Ga0137415_1048561713300028536Vadose Zone SoilGKVSWAEWLRGGIDFRLRPSELVPGCRDVYAVKTGRAMVVRCEAAPQCRRARDLVK
Ga0307468_10052667833300031740Hardwood Forest SoilVPEAWRDLDCDGKVSWAEWLRGGIDFRLRPSELVPGCKDVYHVKSGQTLVVRCEAAPQCRRARDLVK
Ga0307471_10323870113300032180Hardwood Forest SoilCDGHVSPVERLRGGIDFRQRPSQLVAGCQDIYAVKSGAPVVVRCPDPPVCRLARDLLK
Ga0335085_10015377103300032770SoilVQLAREGDVPELWRDLDCDGTVGWAEWLRGGIDFRLRPSTLVPGCQEIYAVKGGAPIVVRCEAAPQCRLARDLLK
Ga0326726_1055151233300033433Peat SoilGGIDFRLRPSRLVPGCQEIYAVKGGAPIVVRCEAPPQCRRARDLVKGSPSSR

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.