NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F085447

Metagenome Family F085447

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F085447
Family Type Metagenome
Number of Sequences 111
Average Sequence Length 112 residues
Representative Sequence LKDDEIRRLALRFIRSSFIDSGEIKANSPVEPEDWQGQVPSPVSLHDVLDDLELKTTNLLRVERGWRITKLLLKEGSVIPRELAHAQPYFIRPKKQALEVYYLTNEPLRRAK
Number of Associated Samples 75
Number of Associated Scaffolds 111

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Archaea
% of genes with valid RBS motifs 9.01 %
% of genes near scaffold ends (potentially truncated) 28.83 %
% of genes from short scaffolds (< 2000 bps) 66.67 %
Associated GOLD sequencing projects 60
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Archaea (94.595 % of family members)
NCBI Taxonomy ID 2157
Taxonomy All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(54.054 % of family members)
Environment Ontology (ENVO) Unclassified
(48.649 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(57.658 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 25.89%    β-sheet: 17.86%    Coil/Unstructured: 56.25%
Feature Viewer
Powered by Feature Viewer

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 111 Family Scaffolds
PF03720UDPG_MGDP_dh_C 5.41
PF05050Methyltransf_21 3.60
PF14117DUF4287 3.60
PF00801PKD 3.60
PF03721UDPG_MGDP_dh_N 2.70
PF08734GYD 2.70
PF01872RibD_C 2.70
PF14378PAP2_3 1.80
PF01925TauE 0.90
PF10049DUF2283 0.90
PF00535Glycos_transf_2 0.90
PF13432TPR_16 0.90
PF00005ABC_tran 0.90
PF09335SNARE_assoc 0.90
PF04185Phosphoesterase 0.90
PF00348polyprenyl_synt 0.90
PF00127Copper-bind 0.90
PF12679ABC2_membrane_2 0.90

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 111 Family Scaffolds
COG0240Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 2.70
COG0262Dihydrofolate reductaseCoenzyme transport and metabolism [H] 2.70
COG0677UDP-N-acetyl-D-mannosaminuronate dehydrogenaseCell wall/membrane/envelope biogenesis [M] 2.70
COG1004UDP-glucose 6-dehydrogenaseCell wall/membrane/envelope biogenesis [M] 2.70
COG12503-hydroxyacyl-CoA dehydrogenaseLipid transport and metabolism [I] 2.70
COG1893Ketopantoate reductaseCoenzyme transport and metabolism [H] 2.70
COG1985Pyrimidine reductase, riboflavin biosynthesisCoenzyme transport and metabolism [H] 2.70
COG4274Uncharacterized conserved protein, contains GYD domainFunction unknown [S] 2.70
COG0142Geranylgeranyl pyrophosphate synthaseCoenzyme transport and metabolism [H] 0.90
COG0398Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 familyFunction unknown [S] 0.90
COG0586Membrane integrity protein DedA, putative transporter, DedA/Tvp38 familyCell wall/membrane/envelope biogenesis [M] 0.90
COG0730Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 familyInorganic ion transport and metabolism [P] 0.90
COG1238Uncharacterized membrane protein YqaA, VTT domainFunction unknown [S] 0.90
COG3511Phospholipase CCell wall/membrane/envelope biogenesis [M] 0.90

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002558|JGI25385J37094_10004881All Organisms → cellular organisms → Archaea → TACK group4704Open in IMG/M
3300002560|JGI25383J37093_10011189All Organisms → cellular organisms → Archaea → TACK group2949Open in IMG/M
3300002561|JGI25384J37096_10051045All Organisms → cellular organisms → Archaea → TACK group1570Open in IMG/M
3300002562|JGI25382J37095_10075385All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1248Open in IMG/M
3300002908|JGI25382J43887_10004253All Organisms → cellular organisms → Archaea6663Open in IMG/M
3300002908|JGI25382J43887_10015023All Organisms → cellular organisms → Archaea4042Open in IMG/M
3300002908|JGI25382J43887_10085847All Organisms → cellular organisms → Archaea1684Open in IMG/M
3300002908|JGI25382J43887_10094945All Organisms → cellular organisms → Archaea1583Open in IMG/M
3300002908|JGI25382J43887_10098203All Organisms → cellular organisms → Bacteria1551Open in IMG/M
3300005174|Ga0066680_10063578All Organisms → cellular organisms → Archaea2196Open in IMG/M
3300005174|Ga0066680_10746199All Organisms → cellular organisms → Archaea → TACK group595Open in IMG/M
3300005176|Ga0066679_10207651All Organisms → cellular organisms → Archaea → TACK group1250Open in IMG/M
3300005180|Ga0066685_10101666All Organisms → cellular organisms → Bacteria1920Open in IMG/M
3300005446|Ga0066686_10130921All Organisms → cellular organisms → Archaea1644Open in IMG/M
3300005447|Ga0066689_10034166All Organisms → cellular organisms → Archaea → TACK group2621Open in IMG/M
3300005468|Ga0070707_100011942All Organisms → cellular organisms → Archaea8104Open in IMG/M
3300005518|Ga0070699_100023480All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon5312Open in IMG/M
3300005536|Ga0070697_100252724All Organisms → cellular organisms → Archaea → TACK group1508Open in IMG/M
3300005552|Ga0066701_10691497All Organisms → cellular organisms → Archaea → TACK group613Open in IMG/M
3300005557|Ga0066704_11039850All Organisms → cellular organisms → Archaea → TACK group505Open in IMG/M
3300005586|Ga0066691_10077117All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1838Open in IMG/M
3300006796|Ga0066665_10206427All Organisms → cellular organisms → Archaea → TACK group1528Open in IMG/M
3300006797|Ga0066659_10005209All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon6467Open in IMG/M
3300007255|Ga0099791_10072605All Organisms → cellular organisms → Archaea → TACK group1561Open in IMG/M
3300007255|Ga0099791_10311536All Organisms → cellular organisms → Archaea → TACK group751Open in IMG/M
3300007258|Ga0099793_10002817All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon5897Open in IMG/M
3300007265|Ga0099794_10292997All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon842Open in IMG/M
3300009012|Ga0066710_100001893All Organisms → cellular organisms → Archaea16238Open in IMG/M
3300009012|Ga0066710_100130541All Organisms → cellular organisms → Archaea → TACK group3448Open in IMG/M
3300009038|Ga0099829_10113879All Organisms → cellular organisms → Archaea2120Open in IMG/M
3300009038|Ga0099829_10235461All Organisms → cellular organisms → Archaea → TACK group1490Open in IMG/M
3300009038|Ga0099829_11499228All Organisms → cellular organisms → Archaea → TACK group557Open in IMG/M
3300009088|Ga0099830_10232721All Organisms → cellular organisms → Archaea → TACK group1453Open in IMG/M
3300009089|Ga0099828_10259419All Organisms → cellular organisms → Archaea1559Open in IMG/M
3300009090|Ga0099827_10025907All Organisms → cellular organisms → Archaea → TACK group4162Open in IMG/M
3300009090|Ga0099827_10105049All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon2252Open in IMG/M
3300009090|Ga0099827_10143060All Organisms → cellular organisms → Archaea1950Open in IMG/M
3300009090|Ga0099827_10226932All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1562Open in IMG/M
3300009090|Ga0099827_11676705All Organisms → cellular organisms → Archaea → TACK group554Open in IMG/M
3300010301|Ga0134070_10226779All Organisms → cellular organisms → Archaea → TACK group692Open in IMG/M
3300010304|Ga0134088_10217114All Organisms → cellular organisms → Archaea917Open in IMG/M
3300010336|Ga0134071_10621314All Organisms → cellular organisms → Archaea → TACK group566Open in IMG/M
3300010398|Ga0126383_11187915All Organisms → cellular organisms → Archaea → TACK group853Open in IMG/M
3300011270|Ga0137391_10091136All Organisms → cellular organisms → Archaea → TACK group2635Open in IMG/M
3300011270|Ga0137391_10739752All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon814Open in IMG/M
3300011270|Ga0137391_11285722All Organisms → cellular organisms → Archaea → TACK group579Open in IMG/M
3300011271|Ga0137393_10655202All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon900Open in IMG/M
3300011271|Ga0137393_11413803All Organisms → cellular organisms → Archaea → TACK group585Open in IMG/M
3300012189|Ga0137388_10158956All Organisms → cellular organisms → Archaea → TACK group2008Open in IMG/M
3300012199|Ga0137383_10021296All Organisms → cellular organisms → Archaea → TACK group4490Open in IMG/M
3300012199|Ga0137383_10052372All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon2919Open in IMG/M
3300012199|Ga0137383_10110205All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon2003Open in IMG/M
3300012201|Ga0137365_10339846All Organisms → cellular organisms → Bacteria1110Open in IMG/M
3300012203|Ga0137399_10016013All Organisms → cellular organisms → Archaea4738Open in IMG/M
3300012204|Ga0137374_10158692All Organisms → cellular organisms → Bacteria2008Open in IMG/M
3300012204|Ga0137374_10393998All Organisms → cellular organisms → Archaea1103Open in IMG/M
3300012206|Ga0137380_10061325All Organisms → cellular organisms → Archaea3441Open in IMG/M
3300012206|Ga0137380_10190101All Organisms → cellular organisms → Archaea → TACK group1865Open in IMG/M
3300012206|Ga0137380_10577930All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon984Open in IMG/M
3300012206|Ga0137380_10889583All Organisms → cellular organisms → Archaea → TACK group765Open in IMG/M
3300012206|Ga0137380_11236196All Organisms → cellular organisms → Archaea → TACK group632Open in IMG/M
3300012207|Ga0137381_10022331All Organisms → cellular organisms → Archaea → TACK group5024Open in IMG/M
3300012207|Ga0137381_10157926All Organisms → cellular organisms → Archaea1954Open in IMG/M
3300012208|Ga0137376_11421947All Organisms → cellular organisms → Archaea → TACK group584Open in IMG/M
3300012209|Ga0137379_10006656All Organisms → cellular organisms → Archaea10968Open in IMG/M
3300012209|Ga0137379_10010840All Organisms → cellular organisms → Archaea8673Open in IMG/M
3300012349|Ga0137387_10321348All Organisms → cellular organisms → Archaea → TACK group1120Open in IMG/M
3300012350|Ga0137372_10211357All Organisms → cellular organisms → Bacteria1546Open in IMG/M
3300012351|Ga0137386_10111680All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1939Open in IMG/M
3300012360|Ga0137375_10839058All Organisms → cellular organisms → Archaea → TACK group735Open in IMG/M
3300012363|Ga0137390_10683281All Organisms → cellular organisms → Archaea → TACK group990Open in IMG/M
3300012918|Ga0137396_10173105All Organisms → cellular organisms → Archaea1579Open in IMG/M
3300012925|Ga0137419_11616904All Organisms → cellular organisms → Archaea → TACK group551Open in IMG/M
3300012927|Ga0137416_10386317All Organisms → cellular organisms → Archaea → TACK group1183Open in IMG/M
3300012927|Ga0137416_10407806All Organisms → cellular organisms → Archaea → TACK group1153Open in IMG/M
3300012927|Ga0137416_11326047All Organisms → cellular organisms → Archaea → TACK group650Open in IMG/M
3300012972|Ga0134077_10332026All Organisms → cellular organisms → Archaea644Open in IMG/M
3300017659|Ga0134083_10154916All Organisms → cellular organisms → Archaea929Open in IMG/M
3300018431|Ga0066655_10883701All Organisms → cellular organisms → Archaea → TACK group610Open in IMG/M
3300018433|Ga0066667_11138069All Organisms → cellular organisms → Archaea → TACK group677Open in IMG/M
3300021046|Ga0215015_11006322All Organisms → cellular organisms → Archaea → TACK group606Open in IMG/M
3300025922|Ga0207646_10331316All Organisms → cellular organisms → Archaea1375Open in IMG/M
3300026277|Ga0209350_1057304All Organisms → cellular organisms → Archaea → TACK group1120Open in IMG/M
3300026296|Ga0209235_1137132All Organisms → cellular organisms → Archaea → TACK group999Open in IMG/M
3300026297|Ga0209237_1026475All Organisms → cellular organisms → Archaea → TACK group3226Open in IMG/M
3300026298|Ga0209236_1001788All Organisms → cellular organisms → Archaea13019Open in IMG/M
3300026298|Ga0209236_1057993All Organisms → cellular organisms → Archaea → TACK group1894Open in IMG/M
3300026298|Ga0209236_1221577All Organisms → cellular organisms → Archaea → TACK group660Open in IMG/M
3300026313|Ga0209761_1000315All Organisms → cellular organisms → Archaea28536Open in IMG/M
3300026326|Ga0209801_1039844All Organisms → cellular organisms → Archaea → TACK group2185Open in IMG/M
3300026480|Ga0257177_1005480All Organisms → cellular organisms → Archaea → TACK group1543Open in IMG/M
3300026480|Ga0257177_1041265All Organisms → cellular organisms → Archaea → TACK group700Open in IMG/M
3300026524|Ga0209690_1102072All Organisms → cellular organisms → Archaea1171Open in IMG/M
3300026536|Ga0209058_1301784All Organisms → cellular organisms → Archaea → TACK group551Open in IMG/M
3300026537|Ga0209157_1002304All Organisms → cellular organisms → Archaea15303Open in IMG/M
3300026540|Ga0209376_1111466All Organisms → cellular organisms → Bacteria1378Open in IMG/M
3300026548|Ga0209161_10060958All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon2416Open in IMG/M
3300026551|Ga0209648_10210718All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1473Open in IMG/M
3300027643|Ga0209076_1150507All Organisms → cellular organisms → Archaea → TACK group651Open in IMG/M
3300027655|Ga0209388_1153250All Organisms → cellular organisms → Archaea → TACK group651Open in IMG/M
3300027671|Ga0209588_1128014All Organisms → cellular organisms → Archaea → TACK group811Open in IMG/M
3300027846|Ga0209180_10005627All Organisms → cellular organisms → Archaea6318Open in IMG/M
3300027846|Ga0209180_10064806All Organisms → cellular organisms → Archaea → TACK group2038Open in IMG/M
3300027846|Ga0209180_10710315All Organisms → cellular organisms → Archaea → TACK group546Open in IMG/M
3300027862|Ga0209701_10466721All Organisms → cellular organisms → Archaea → TACK group692Open in IMG/M
3300027882|Ga0209590_10037089All Organisms → cellular organisms → Archaea → TACK group2627Open in IMG/M
3300027882|Ga0209590_10071078All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon2005Open in IMG/M
3300027882|Ga0209590_10084451All Organisms → cellular organisms → Archaea → TACK group1862Open in IMG/M
3300027882|Ga0209590_10728931All Organisms → cellular organisms → Archaea → TACK group633Open in IMG/M
3300027882|Ga0209590_10836571All Organisms → cellular organisms → Archaea → TACK group583Open in IMG/M
3300028536|Ga0137415_10138647All Organisms → cellular organisms → Archaea2272Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil54.05%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil18.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil15.32%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil4.50%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.90%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.90%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cmEnvironmentalOpen in IMG/M
3300002560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cmEnvironmentalOpen in IMG/M
3300002561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cmEnvironmentalOpen in IMG/M
3300002562Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002908Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300021046Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depthEnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026277Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026296Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026297Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026298Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026313Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)EnvironmentalOpen in IMG/M
3300026480Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-BEnvironmentalOpen in IMG/M
3300026524Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)EnvironmentalOpen in IMG/M
3300026536Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)EnvironmentalOpen in IMG/M
3300026537Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)EnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027643Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)EnvironmentalOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027671Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25385J37094_1000488123300002558Grasslands SoilLKDEEIRRLALRFIRSSFIDSGEIKTNSSIEPVEWEGPGPSRVSLHDVLDDLELKTTTLLRAERGWHITKLLLKEGSEVPRELAHEQPYYIRPLKRGLEVYYLTKESLQRTK*
JGI25383J37093_1001118943300002560Grasslands SoilLKDEEIRRLALRFIRSSFIDSGEIKTNSSIEPVEWEGPGPSRVSLHDVLDDLELKTTTLLRAERGWRITKLLLKEGSEVPRELAHEQPYYIRPLKRGLEVYYLTKESLQRTK*
JGI25384J37096_1005104523300002561Grasslands SoilLKDDEIRHLALRFIRSSFIDSGEIKANSPVEPEDWTGQVSSPVSLHEVLDDLELKTTSLLRSERGWRVKKLLFKEGSEVPRELAHAQPYYIRPRNQALEVYYLTNEPLRRTR*
JGI25382J37095_1007538523300002562Grasslands SoilLKDDEIRSLALRFIRSSFIESGEIKTVNPAEPEGWEMPGSSRVSLHDVLDDLELKTTSLLRAERGWRITRLLLRDGSVVPRELAHAQPYFIRPRKQSLEVYYLTNEPLRRTKEPASGNHALK*
JGI25382J43887_1000425383300002908Grasslands SoilLKDDEIRHLALRFIRSSFIDSGEIKANSPVEPEDWTGQVSSPVSLHEVLDDLELKTTSLLRSERGWRVKKLLLKEGSEVPRELAHAQPYYIRPRKQALEVYYLTNEPLRRTK*
JGI25382J43887_1001502323300002908Grasslands SoilLKDEEIRRLALRFIRSSFIDSGEIKTNSSIEPVEWEVPGPSRVSLHDVLDDLELKTTTLLRAERGWRITKLLLKEGSEVPRELAHEQPYYIRPLKRGLEVYYLTKESLQRTK*
JGI25382J43887_1008584723300002908Grasslands SoilLKDEEIRRLALRFIRSSFIESGEIKTNSSIEPVEWEEPGPSRVSLHDVLDDLELKTTSLLRAERGWRITKLLLKEGSEVPRELAHEQPYYIRPLKRGLEVYYLTKESLRRTK*
JGI25382J43887_1009494523300002908Grasslands SoilLKDDEIRSLALRFIRSSFIESGEIKTVNPAEPEGWEMPGSSRVSLHDVLDDLELKTTSLLRAERGWRITRLLLRDGSVVPRELAHAQPYFIRPRKQSLEVYYLTNEPLPRTK*
JGI25382J43887_1009820333300002908Grasslands SoilDEEIRRLALRFIRSSFIDSGEIKTNSSIEPVEWAGPGPSRVSLHDVLDDLELKTTSLLRAERGWRITKLLLKEGSEVPRELAHEQPYYIRPLKRGLEVYYLTKESLQRTK*
Ga0066680_1006357833300005174SoilLKDEEIRRLALRFIRSSFIDSGEIKTNSSIEPVEWEVPGPSRVSLHDVLDDLELKTTTLLRAERGWRITKLLLKEGSEVPRELAHEQPYYIRPLKRGLEVYYL
Ga0066680_1074619913300005174SoilLKDEEIRRLALRFIRSSFIDSGEIKTNSSIEPVEWAGPGPSRVSLHDVLDDLELKTTSLLRAERGWRITKLLLKEGSEVPRELAHEQPYYIRPLKRGLEVYYL
Ga0066679_1020765123300005176SoilLLEEEQIRRTALKFIQSSFIDSGEVKTDSSIEPEDWERPSSSRLSLHEILDDLELKTNIALRAEKGWRILKLLVKEGSEVPRQLAHVQPYYIRPRREALEVYFLVNESLGRIR*
Ga0066685_1010166623300005180SoilMRTKPRHKLKDDEIRRLALRFINSSFIDNGEIKTISPTEPGDWEKTGSSNVSLHDVLDDLELKTTNLLRAERGWRITKLLLKEGSELPRELAHAQPYFIRPRKQALEVYYLTNEPLRRAK
Ga0066686_1013092133300005446SoilKPRYKLKDDEIRRLALRFIKSSFIDSGEIKSVSPTEPDDGEKTGSSPINLHDVLDDLELKTTNLLRAERGWRIKKLLLKEGSELPRELAHAQPYYIRPRKQALEVYYLTNEPLRRAK*
Ga0066689_1003416643300005447SoilLKDEEIRRLALRFIRSSFIDSGEIKTNSSIEPVEWAGPGPSRVSLHDVLDDLELKTTSLLRAERGWRITKLLLKEGSEVPRELAHEQPYYIRPLKRGLEVYYLTKESLQ
Ga0070707_10001194213300005468Corn, Switchgrass And Miscanthus RhizosphereLKDDEIRRLALRFIRSSFIDSGEIKTNSQIEPENWAGSNASPVSLHDVLDDLELKTTSLLRAERGWRIRKLLIKDGSEVPRELAHAQPYYIRPRKQALEVYYLTNEPLKRTK*
Ga0070699_10002348013300005518Corn, Switchgrass And Miscanthus RhizosphereLKDDEIRSLALRFIRSSFIDSGEIKTHSPVEPEDRRGQSSSPVSLHDVLDDLELKTTSLLRSERGWRVKKLLLKDGSEIPRELAHSTPYYIRPRKQALEVYYLTNEPLRRTK*
Ga0070697_10025272423300005536Corn, Switchgrass And Miscanthus RhizosphereLKDDEIRSLALRFIRSSFIDSGEIKTHSPVEPEDWRGQSSSPVSLHDVLDDLELKTTSLLRSERGWRVKKLLLKDGSEIPRELAHSTPYYIRPRKQALEVYYLTNEPLRRTK*
Ga0066701_1069149713300005552SoilLALRFIRSSFIDSGEIKTNSSIEPVEWAGPGPSRVSLHDVLDDLELKTTSLLRAERGWRITKLLLKEGSEVPRELAHEQPYYIRPLKRGLEVYYLTKESLQ
Ga0066704_1103985013300005557SoilTPIVRRAIQILTLKDDEIRRLALRFIRSSFIDSGEIRANSAVEPEDWQGHVPSPVSLHDVLDDLELKTTSLLRVERGWRITKLLLKDGSVIPRELAHAQPYFIRPKKQALEVYYLTNEPLRRAK*
Ga0066691_1007711713300005586SoilLKDEEIRRLALRFIRSSFIDSGEIKTNSSIEPVEWAGPGPSRVSLHDVLDDLELKTTSLLRAERGWRITKLLLKEGSEVPRELAHEQPYYIRPLKRGLEVYYLTKESLQRTK*
Ga0066665_1020642723300006796SoilLKDEEIRRLALRFIRSSFIDSGEIKTNSSIEPVEWAGPGPSRVSLHDVLDDLELKTTTLLRAERGWRITKLLLKEGSEVPRELAHEQPYYIRPLKRGLEVYYLTKESLQRTK*
Ga0066659_1000520923300006797SoilLKDDEIRRLALRFIRSSFIDSGEIKANSPVEPEDWQGQVPSPVSLHDVLDDLELKTTNLLRVERGWRITKLLLKDGSVIPRELAHAQPYFIRPKKQALEVYYLTNEPLRGAK*
Ga0099791_1007260513300007255Vadose Zone SoilLKDDEIRHLALRFIKSSFIDSGEIKTNSQIEPENWTGSSESPVSLHDVLDDLELKTTSLLRVERGWRIRKLLIKDGSEVPRELAHAQPYFIRPKKQALEVYYLTNEPLKRAK*
Ga0099791_1031153613300007255Vadose Zone SoilLKDDEIRHLALRFIKSSFIDSGEIKTDTQMEPENWTGSNASPVSLHDVLDDLELKTNSLLRVERGWRIRKLLIKDGSEVPRELAHAQPYFIRPKKQALEVYYLTNEPLKRAK*
Ga0099793_1000281733300007258Vadose Zone SoilLREEEQIRRTALKFIQSSFIESGEIKANSSIEPDDWERPSSSQLSLHDILDDLELKTNIALRAEKGWRILKLLVKEGSEVPRQLAHVQPFYIRPRREVLEVYFLVNESLGRIR*
Ga0099794_1029299713300007265Vadose Zone SoilLKDDEIRRLALRFIRSSFIDSGEIKTNSPVEPEDWERQVSSPVSLHDVLDDLELKTTTLLRTERGWHVTKLLIKDGSEVPRELAHAQPYYIRPRKLALEVYYLTNEPLKRTK*
Ga0066710_10000189333300009012Grasslands SoilLKDDEIRRLALRFIKSSFIDSGEIKSVSPTEPDDGEKTGSSPINLHDVLDDLELKTTNLLRAERGWRIKKLLLKEGSELPRELAHAQPYYIRPRKQALEVYYLTNEPLRRAK
Ga0066710_10013054143300009012Grasslands SoilLKDEEIRRLALRFIRSSFIDSGEIKTNSSIEPVEWEEPGPSRVSLHDVLDDLELKTTSLLRAERGWRITKLLLKEGSEVPRELAHEQPYYIRPLKRGLEVYYLTKESLQRTK
Ga0099829_1011387913300009038Vadose Zone SoilLKDDEIRRLALRFIRSSFIDSGEIKTNSPVEPEDWERQVSSPVSLHDVLDDLELKTTTLLRTERGWHVTKLLIKDGSEVPRELAHAQPYYIRPRKQALEVYYLTNEPLKRTK*
Ga0099829_1023546113300009038Vadose Zone SoilLKDDEIRRLALRFIRSSFIDSGEIKTNSQVEPENWAGSNASPVSLHDVLDDLELKTTNLLRVERGWRITKLLLKEGSVIPRELAHAQPYFIGPKKQALEVYYLTNEPLRRAK*
Ga0099829_1149922813300009038Vadose Zone SoilKLKDDEIRHLALRFIKSSFIDSGEIKTNSQIEPENWTGSNASPVSLHDVLDDLELKTTSLLRVERGWRIRKLLIKDGSEVPRELAHAQPYFIRPKKQALEVYYLTNEPLKRAK*
Ga0099830_1023272113300009088Vadose Zone SoilLKDDEIRHLALRFIKSSFIDSGEIKTNSQIEPENWTGSNASPVSLHDVLDDLELKTTSLLRVERGWRIRKLLIKDGSEVPRELAHAQPYFIRPKKQALEVYYLTNEPLKRAK*
Ga0099828_1025941913300009089Vadose Zone SoilLKDDEIRSLALRFIRSSFIDSGEIRTVSPAEPEGWEMPGSSRVSLHDVLDDLELKTTSLLRAERGWRITRLLLRDGSVVPRELAHAQPYFIRPRKQSLEVYYLTNEPLRPTK*
Ga0099827_1002590723300009090Vadose Zone SoilLQDDEIRRLALRFIRSSFIDSGEIKANSPVEPEDWQGQVPSPVSLHDVLDDLELKTTNLLRVERGWRITKLLLKEGSVIPRELAHAQPYFIRPKKQALEVYYLTNEPLRRAK*
Ga0099827_1010504923300009090Vadose Zone SoilLKDDEIRRLALRFIRSSFIDSGEIRANSAVEPEDWQGQVPSPVSLHDVLDDLELKTTSLLRVERGWRITKLLLKDGSVIPRELAHAQPYFIRPKKQALEVYYLTNEPLRRAK*
Ga0099827_1014306023300009090Vadose Zone SoilLKDDEIRSLALRFIRSSFIDSGEIKAVSPAEQEGWEMPGASRVSLHDVLDDLELKTTSLLRAERGWRITRLLLKDGSVVPRELAHAQPYFIRPRKQALEVYYLTNEPLRRTK*
Ga0099827_1022693223300009090Vadose Zone SoilLKDDEIRSLALRFIRSSFIDSGEIRTVNPAEPEGWEMPGSSRVSLHDVLDDLELKTTSLLRAERGWRITRLLLRDGSVVPRELAHAQPYFIRPRKQSLEVYYLTNEPLRRTK*
Ga0099827_1167670513300009090Vadose Zone SoilLKDDEIRRLALRFIRSSFIDSGEIKANSPVEPEDGQGQAPSPVSLHDVLDDLELKTTNLLRVERGWRITKLLLKEGSVIPRELAHAQPYFIRPKKQALEVYYLTNEPLRRAK*
Ga0134070_1022677923300010301Grasslands SoilMRAKPRYKLKDDEIRRLALRFITSSFIDSGEIKSVSPTEPDDGEKTGSSPINLHDVLDDLELKTTNLLRAERGWRIKKLVLKEGSELPRELAHAQPYYIRPRKQALEVYYLTNEPLHRTK
Ga0134088_1021711413300010304Grasslands SoilMRAKPRYKLKDDEIRRLALRFIKSSFIDSGEIKSVSPTEPDDGEKTGSSPINLHDVLDDLELKTTNLLRAERGWRIKKLLLKEGSELPRELAHAQPYFIRPRKQALEVYYLTNEPLRRAK
Ga0134071_1062131413300010336Grasslands SoilMRAKPRYKLKDDEIRRLALRFIKSSFIDSGEIKSVSPTEPDDGEKTGSSPINLHDVLDDLELKTTNLLRAERGWRIKKLLLKEGSELPRELAHAQPYYIRPRKQALEVYNLTNEPLRRAK
Ga0126383_1118791513300010398Tropical Forest SoilIKLKDDDIRRLALGFIRSSFIDSGEIKSNSLNESRNPETSSPYPVSLHDVLDDLERKTTNILRQERGWRITKLLLKEGSIIPRELAHTQPYFIQPKKQGLEVYYLTNEPQRPSK*
Ga0137391_1009113623300011270Vadose Zone SoilLKDDEIRRLALRFIRSSFIDSGEIKANSPVEPEDWQGQVPSPVSLHDVLDDLELKTTNLLRVERGWRITKLLLKEGSVIPRELAHAQPYFIRPKKQALEVYYLTNEPLRRAK*
Ga0137391_1073975223300011270Vadose Zone SoilFIDSGEIKTDTQTEPENWTGSNASPVSLHDVLDDLELKTTSLLRVERGWRIRKLLIKDGSEVPRELAHAQPYFIRPKKQALEVYYLTNEPLKRAK*
Ga0137391_1128572213300011270Vadose Zone SoilLKDDEIRRLALRFIRSSFIDSGEIKTNSQIEPENWGGSNMSPVSLHDVLDDLELKTTSLLRAERGWRIRKLLIKDGSEVPRELAHAQPYYIRPRKQALEVYYLTNEPLKRTK*
Ga0137393_1065520213300011271Vadose Zone SoilLRISRNSYVTPIVSAVNPSPKLKDDEIRSLALRFIRSSFIDSGEIRTVNPAEPEGWEMPGSSRVSLHDVLDDLELKTTSLLRAERGWRITRLLLRDGSVVPRELAHAQPYFIRPRKQSLEVYYLTNEPLRPTK*
Ga0137393_1141380313300011271Vadose Zone SoilLKDDEIRHLALRFIKSSFIDSGEIKTNSQIEPENWTGSNESPVSLHDVLDDLELKTTSLLRVERGWRIRKLLIKDGSEVPRELAHAQPYFIRPKKQALEVYYLTNEPLKRAK*
Ga0137388_1015895613300012189Vadose Zone SoilLKDDEIRHLALRFIRSSFIDSGEIKANSPVEPEDWTGQVSSPVSLHEVLDDLELKTTSLLRSERGWRVKKLLLKEGSEVPRELAHAQPYYIRPRKQALEVYYLTNEPLRRAK*
Ga0137383_1002129633300012199Vadose Zone SoilLKDDEIRSLALRFIRSSFIDSGEIKANSPVEPEDWQGQSPSPVNLHDVLDDLELKTTNLLRVERGWRITKLLLKEGSVIPRELAHAQPYFIRPKKQALEVYYLTNEPLRRAK*
Ga0137383_1005237233300012199Vadose Zone SoilLKDDEIRRLALRFIRSSFIDSGEIKASPPVAPEDWQGQGPSPVSLHDVLDDLELKTANLLRVERGWRITKLLLKEGSVIPRELAHAQPYFIRPKKQALEVYYLTNEPLRRPK*
Ga0137383_1011020523300012199Vadose Zone SoilLKDDEIRRLSLRFIRSSFIDSGEIKTNSQIEPESWERSNASPVSLHDVLDDLELKTTNLLRAERGWRMRKLLIKDGSEVPRELAHAQPYFIRPRKQALEVYYLTDEPLRRIKWPRARLFAHVENFYPCSARTWVTMG*
Ga0137365_1033984623300012201Vadose Zone SoilLKDDEIRRLALRFIKSSFIDSGEIKTISPTEPGDWERTGSSNVSLHDVLDDLELKTTNLLRAERGWRIKKLVLKEGSELPRELAHAQPYYIRPRKQALEVYYLTNEPLHRTK*
Ga0137399_1001601343300012203Vadose Zone SoilLKDEDVRRTALKFIQSSFIESGEIKTDSSIEPDDWERPSSSRLSLHDILDDLELKTNIALRAEKGWRILKLLLKEGSEVPRELAHTQPFYIRPRKEGLEVYFVVNESLGRIK*
Ga0137374_1015869233300012204Vadose Zone SoilMRTKPSHKLKDDEIRRLALRFIKSSFIDSGEIKTISPTEPSDWEKTGSSHISLHDVLDDLELKTTNLLRAERGWRITKLLLKEGSELPRELAHAQPYYIRPRKQALEVYYLTNEPLHRTK
Ga0137374_1039399813300012204Vadose Zone SoilLKDDEIRRLALRFITSSFIDSGEIKSVIPTEPDDGQKTGSSPISLHDVLDDLELKTTNLLRAERGWRIKKLVLKEGSELPRELAHAQPYYIRPRKQALEVYYLTNEPLRRAK*
Ga0137380_1006132523300012206Vadose Zone SoilLKDDEIRRLALRFIRSSFIDSGEIKANSPVEPEDWQGQVPSPVSLHDVLDDLELKTTNLLRVERGWRITRLLLKEGSVIPRELAHSQPYFIRPKKQALEVYYLTNEPLRRAK*
Ga0137380_1019010123300012206Vadose Zone SoilLKDDEIRRLALRFIRSSFIDSGEIRANSAVEPEDWQGQVPSPVSLHDVLDDLELKTTSLLRVERGWRITKLLLKDGSVIPRELAHAQPYFIRPKKQALEVYYLTN
Ga0137380_1057793013300012206Vadose Zone SoilLKDEEIRRLALRFIRSSFIDSGEIKTNSSMEPVEWEGPGPSRVSLHDVLDDLELKTTSLLRAERGWRITKLLLKEGSEVPRELAHEQPYYIRPLKRGLEVYYLTKESLRQTK*
Ga0137380_1088958313300012206Vadose Zone SoilLKDDDIRRLALRFIRSSFIDSGEIKTNSQIGPESWERSNASPVSLHDVLDDLELKTTTLLRAERGWRIRKLLIKDGSEVPRELAHAQPYFIRPKKQALEVYYLTNEPLRRIK*
Ga0137380_1123619623300012206Vadose Zone SoilLKDDEIRRLALRFIKSSFIDSGEIKSVSPTEPDDGEKTGSSPISLHDVLDDLELKTTNLLRAERGWRIKKLVLKEGSELPRELAHAQPYYIRPRKQA
Ga0137381_1002233153300012207Vadose Zone SoilLKDDEIRRLALRFIRSSVIDSGEIRANSAVEPEDWQGQVPSPVSLHDVLDDLELKTTSLLRVERGWRITKLLLKDGSVIPRELAHAQPYFIRPKKQALEVYYLTNEPLRRAK*
Ga0137381_1015792613300012207Vadose Zone SoilVRVLKLKDDDIRRLALRFIRSSFIDSGEIKTNSQIGPESWERSNASPVSLHDVLDDLELKTTTLLRAERGWRIRKLLIKDGSEVPRELAHAQPYFIRPKKQALEVYYLTNEPLRRIK*
Ga0137376_1142194713300012208Vadose Zone SoilLKDDEIRRLALKFIKSSFIDSGEIKTISPTEPGDWEKTGSSHISLHDILDDLELKTTNLLRAERGWRITKLLLKEGSELPRELAHAQPYYIRPRKQALELY
Ga0137379_10006656113300012209Vadose Zone SoilLKDEEIRRLALRFVRSSFIDSGEIKTSSSIEPVEWEEPAPSSVSLHDVLDDLELKTTSLLRAERGWRITKLLLKEGSEVPRELAHEQPYYIRPLKRGLEVYYLTKESLRRTK*
Ga0137379_10010840113300012209Vadose Zone SoilLKDDEIRRLALRFIRSSFIDSGEIRANSAVEPEDWQGHVPSPVSLHDVLDDLELKTTSLLRVERGWRITKLLLKDGSVIPRELAHAQPYFIRPKKQALEVYYLTNEPLRRAK*
Ga0137387_1032134813300012349Vadose Zone SoilLKDDEIRRLALRFIRSSFIDSGEIKANSPVEPEDWQGQVPSPVSLHDVLDDLELKTTNLLRVERGWRITKLLLKDGSVIPRELAHAQPYFIRPKKQALEVYYLTNEPLRRAK*
Ga0137372_1021135723300012350Vadose Zone SoilMRTKPSHKLKDDEIRRLALRFIKSSFIDSGEIKTISPTEPSDWEKTGSSHISLHDVLDDLELKTTNLLRAERGWRITKLLLKEESELPRELAHAQPYYIRPRKQALEVYYLTNEPLHRTK
Ga0137386_1011168033300012351Vadose Zone SoilRVLKLKDDDIRRLALRFIRSSFIDSGEIKASPPVAPEDWQGQGPSPVSLHDVLDDLELKTANLLRVERGWRITKLLLKEGSVIPRELAHAQPYFIRPKKQALEVYYLTNEPLRRPK*
Ga0137375_1083905823300012360Vadose Zone SoilLKDDEIRRLALRFIKSSFIDSGEIKTISPTEPSDWEKTGSSHISLHDVLDDLELKTTNLLRAERGWRITKLLLKEGSELPRELAHAQPYYSRPRKQ
Ga0137390_1068328133300012363Vadose Zone SoilKLKDDEIRSLALRFIRSSFIGSGEIKTVSQAEREGWEMPGMSRVSLHDVLDDLELKTTSLLRAERGWRITRLLLKDGSVVPRELAHAQPYFIRPRKQALEVYYLTNEPLRRTK*
Ga0137396_1017310513300012918Vadose Zone SoilLRDEEEIRRTALKFIQSSFIESGEIKANSSIEPDDWERPSSSQLSLHDILDDLELKTNIALRVERGWRVLKLLLKDGSEVPRELAHTQAFYIRPRKEALE
Ga0137419_1161690413300012925Vadose Zone SoilKFIQSSFIESGEIKANSSIEPDDWERPSSSQLSLHDILDDLELKTNIALRVERGWRVLKLLLKDGSEVPRELAHTQAFYIRPRKEALEVYFIVNESLGRIK*
Ga0137416_1038631733300012927Vadose Zone SoilLKDDEIRHLALRFIKSSFIDSGEIKTDTQMEPENWTGSNASPVSLHDVLDDLELKTTSLLRVERGWRIRKLLIKDGSEVPRELAHAQPYFIRPKKQALEVYYLTNEPLKRAK*
Ga0137416_1040780613300012927Vadose Zone SoilLKDDEIRHLALRFIRSSFIDSGEIKANSPVEPEDWTGQVSSPLSLHEVLDDLELKTTSLLRSERGWRVKKLLFKEGSEVPRELAHAQPYYIRPRKQALEVYYLTNEPLRRTK*
Ga0137416_1132604713300012927Vadose Zone SoilLRDEEEIRRTALKFIQSSFIESGEIKANSSIEPDDWERPSSSQLSLHDILDDLELKTNIALRVERGWRVLKLLLKDGSEVPRELAHTQAFYIRPRKEALEVYFIVNESLGRIK*
Ga0134077_1033202613300012972Grasslands SoilRFINSSFIDSGEIKNVSPTEPDNGEKTGSSPISLHDVLDDLELKTTNLLRAERGWRIKKLVLKEGSELPRELAHAQPYYIRPRKQALEVYYLTNEPLRRAK*
Ga0134083_1015491613300017659Grasslands SoilMRTKPRHKLKDDEIRRLALRFINSSFIDSGEIKTISPTEPGDWEKTGSSPISLHDVLDDLELKTTNLLRAERGWRIKKLLLKEGSELPRELAHAQPYYIRPRKQALEVYYLTNEPLRRAK
Ga0066655_1088370123300018431Grasslands SoilMRAKPRYKLKDDEIRHLALRFITSSFIDSGEIKSVSPTEPDDGEKTGSSPINLHDVLDDLELKTTNLLRAERGWRIKKLVLKEGSELPRELAHAQPYYIRPRKQALEVYYLTNEPLR
Ga0066667_1113806913300018433Grasslands SoilMRAKPRYKLKDDEIRRLALRFIKSSFIDSGEIKSVSPTEPDDGEKTGSSPINLHDVLDDLELKTTNLLRAERGWRIKKLLLKEGSELPRELAHAQPYYIRPRKQALEVYYLTNEPLRRAK
Ga0215015_1100632213300021046SoilLQDDEIRRLALRFIRSSFIDSGEIKANSPVEPEDWQGQVPSPVSLHDVLDDLELKTTNLLRVERGWRITKLLLKEGSVIPRELAHAQPYFIRPKKQALEVYYLTNEPIRRAK
Ga0207646_1033131613300025922Corn, Switchgrass And Miscanthus RhizosphereLKDDEIRRLALRFIRSSFIDSGEIKTNSQIEPENWAGSNASPVSLHDVLDDLELKTTSLLRAERGWRIRKLLIKDGSEVPRELAHAQPYYIRPRKQALEVYYLTNEPLKRTK
Ga0209350_105730413300026277Grasslands SoilLKDEEIRRLALRFIRSSFIDSGEIKTNSSIEPVEWEGPGPSRVSLHDVLDDLELKTTTLLRAERGWRITKLLLKEGSEVPRELAHEQPYYIRPLKRGLEVYYLTKESLQRTK
Ga0209235_113713223300026296Grasslands SoilLKDDEIRHLALRFIRSSFIDSGEIKANSPVEPEDWTGQVSSPVSLHEVLDDLELKTTSLLRSERGWRVKKLLFKEGSEVPRELAHAQPYYIRPRKQALEVYYLTNEPLRRTK
Ga0209237_102647513300026297Grasslands SoilLKDDEIRHLALRFIRSSFIDSGEIKANSPVEPEDWTGQVSSPVSLHEVLDDLELKTTSLLRSERGWRVKKLLFKEGSEVPRELAQAQPYYIRPRKQALEVYYLTNEPLRRTK
Ga0209236_1001788153300026298Grasslands SoilLKDEEIRRLALRFIRSSFIDSGEIKTNSSIEPVEWEGPGPSRVSLHDVLDDLELKTTTLLRAERGWHITKLLLKEGSEVPRELAHEQPYYIRPLKRGLEVYYLTKESLQRTK
Ga0209236_105799313300026298Grasslands SoilRSSFIDSGEIKTNSPVEPEDWTGQVSSPLSLHEVLDDLELKTTSLLRSERGWRVKKLLFKEGSEVPRELAHAQPYYIRPRKQALEVYYLTNEPLRRTK
Ga0209236_122157713300026298Grasslands SoilFIRSSFIDSGEIKTNSSIEPVEWAGPGPSRVSLHDVLDDLELKTTSLLRAERGWRITKLLLKEGSEVPRELAHEQPYYIRPLKRGLEVYYLTKESLQRTK
Ga0209761_1000315273300026313Grasslands SoilPKLKDEEIRRLALRFIRSSFIDSGEIKTNSSIEPVEWEVPGPSRVSLHDVLDDLELKTTTLLRAERGWRITKLLLKEGSEVPRELAHEQPYYIRPLKRGLEVYYLTKESLQRTK
Ga0209801_103984423300026326SoilLKDEEIRRLALRFIRSSFIDSGEIKTNSSIEPVEWAGPGPSRVSLHDVLDDLELKTTSLLRAERGWRITKLLLKEGSEVPRELAHEQPYYIRPLKRGLEVYYLTKESLQRTK
Ga0257177_100548033300026480SoilLKDDEIRHLALRFIRSSFIDSGEIKTGTQIEPENWIGPSTSPASLHDVLDDLELKATSLLRVERGWRIRKLLIKDGSEVPRELAHAQPYFIRPKKQALEVYYLTNEPLKRAK
Ga0257177_104126513300026480SoilLKDDEIRRLALRFIRSSFIDSGEIKTNSQVEPENWAGSNASPVSLHDVLDDLELKTTSLLRAERGWRIRKLLIKDGSEVPRELAHAQPYFIRPRKQALEVYYLTNEPLKRTK
Ga0209690_110207223300026524SoilLKDEEIRRLALRFIRSSFIESGEIKTNSSIEPVEWEEPGPSRVSLHDVLDDLELKTTSLLRAERGWRITKLLLKEGSEVPRELAHEQPYYIRPLKRGLEVYYLTKESLRRTK
Ga0209058_130178413300026536SoilMRAKPRYKLKDDEIRHLALRFITSSFIDSGEIKSVSPTEPDDGEKTGSSPINLHDVLDDLELKTTNLLRAERGWRIKKLVLKEGSELPRELAHAQPYYIRPRKQALEVYYLTNEPLRRAK
Ga0209157_1002304163300026537SoilMRAKPRYKLKDDEIRRLALRFIKSSFIDSGEIKSVSPTEPDDGEKTGSSPINLHDVLDDLELKTTNLLRAERGWRIKKLVLKEGSELPRELAHAQPYYIRPRKQALEVYYLTNEPLRRAK
Ga0209376_111146613300026540SoilMRAKPRYKLKDDEIRRLALRFIKSSFIDSGEIKSVSPTEPDDGEKTGSSPINLHDVLDDLELKTTNLLRAERGWRIKKLLLKEGSELPRELAHAQPYYIRPRKQALEVYY
Ga0209161_1006095843300026548SoilLKDDEIRRLALRFIRSSFIDSGEIKANSPVEPEDWQGQVPSPVSLHDVLDDLELKTTNLLRVERGWRITKLLLKDGSVIPRELAHAQPYFIRPKKQALEVYYLTNEPLRGAK
Ga0209648_1021071813300026551Grasslands SoilLKDDEIRQLALRFIRSSFIDSGEIKTDTQTEPENSTGPSTSPVSLHDVLDDLELKTTSLLRVERGWRIRKLLIKDGSEVPRELAHAQPYFIRPKKQALEVYYLTNEPLKRAK
Ga0209076_115050723300027643Vadose Zone SoilVIPIVRATGQNHKLREEEQIRRTALKFIQSSFIESGEIKANSSIEPDDWERPSSSQLSLHDILDDLELKTNIALRAEKGWRILKLLVKEGSEVPRQLAHVQPFYIRPRREVLEVYFLVNESLGRIR
Ga0209388_115325023300027655Vadose Zone SoilSSFIDSGEIKTDTQMEPENWTGSNASPVSLHDVLDDLELKTNSLLRVERGWRIRKLLIKDGSEVPRELAHAQPYFIRPKKQALEVYYLTNEPLKRAK
Ga0209588_112801413300027671Vadose Zone SoilLKDDEIRHLALRFIKSSFIDSGEIKTDTQMEPENWTGSNASPVSLHDVLDDLELKTTSLLRVERGWRIRKLLIKDGSEVPRELAHAQPYFIRPKKQALEVYYLTNEPLKRAK
Ga0209180_1000562783300027846Vadose Zone SoilLKDDEIRHLALRFIRSSFIDSGEIKANSPVEPEDWTGQVSSPVSLHEVLDDLELKTTSLLRSERGWRVKKLLLKEGSEVPRELAHAQPYYIRPRKQALEVYYLTNEPLRRTK
Ga0209180_1006480623300027846Vadose Zone SoilLKDDEIRRLALRFIRSSFIDSGEIKTNSPVEPEDWERQVSSPVSLHDVLDDLELKTTTLLRTERGWHVTKLLIKDGSEVPRELAHAQPYYIRPRKQALEVYYLTNEPLKRTK
Ga0209180_1071031513300027846Vadose Zone SoilLKDDEIRHLALRFIKSSFIDSGEIKTNSQIEPENWTGSNESPVSLHDVLDDLELKTTSLLRVERGWRIRKLLIKDGSEVPRELAHAQPYFIRPKKQALEVYYLTNEPLKRAK
Ga0209701_1046672113300027862Vadose Zone SoilLALRFIRSSFIDSGEIRTVSPAEPEGWEMPGSSRVSLHDVLDDLELKTTSLLRAERGWRITRLLLRDGSVVPRELAHAQPYFIRPRKQSLEVYYLTNEPLRPTK
Ga0209590_1003708923300027882Vadose Zone SoilLKDDEIRRLALRFIRSSFIDSGEIKANSPVEPEDWQGQVPSPVSLHDVLDDLELKTTNLLRVERGWRITKLLLKEGSVIPRELAHAQPYFIRPKKQALEVYYLTNEPLRRAK
Ga0209590_1007107833300027882Vadose Zone SoilLKDDEIRSLALRFIRSSFIDSGEIKAVSPAEQEGWEMPGASRVSLHDVLDDLELKTTSLLRAERGWRITRLLLKDGSVVPRELAHAQPYFIRPRKQALEVYYLTNEPLRRTK
Ga0209590_1008445113300027882Vadose Zone SoilLKDDEIRSLALRFIRSSFIDSGEIRTVNPAEPEGWEMPGSSRVSLHDVLDDLELKTTSLLRAERGWRITRLLLRDGSVVPRELAHAQPYFIRPRKQSLEVYYLTNEPLRRTK
Ga0209590_1072893113300027882Vadose Zone SoilVQVLKLKDDEIRHLALRFIRSSFIDSGEIKANSPVEPEDWTGQVSSPVSLHEVLDDLELKTTSLLRSERGWRVKKLLLKEGSEVPRELAHAQPYYIRPRKQALEVYYLTNEPLRRTK
Ga0209590_1083657113300027882Vadose Zone SoilKLKDDEIRSLALRFIRSSFIDSGEIRTVNPAEPEGWEMPGSSRVSLHDVLDDLELKTTSLLRAERGWRITRLLLRDGSVVPRELAHAQPYFIRPRKQSLEVYYLTNEPLGRTK
Ga0137415_1013864723300028536Vadose Zone SoilLRDEEEIRRTALKFIQSSFIESGEIKANSSIEPDDWERPSSSQLSLHDILDDLELKTNIALRVERGWRVLKLLLKDGSEVPRELAHTQAFYIRPRKEALEVYFIVNESLGRIK

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.