Metagenome / Metatranscriptome Family F085508

Basic Information
Family ID	F085508
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	94 residues
Representative Sequence	LDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDSALEGFQMLIAESFKPIGQEEQIVPDQRPIKRRSDENPKD
Number of Associated Samples	72
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	97.30 %
% of genes from short scaffolds (< 2000 bps)	79.28 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Archaea (54.955 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (36.036 % of family members)
Environment Ontology (ENVO)	Unclassified (69.369 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (74.775 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.26% β-sheet: 0.00% Coil/Unstructured: 45.74%
Feature Viewer

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Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF01243	Putative_PNPOx	54.05
PF13614	AAA_31	3.60
PF00801	PKD	3.60
PF01656	CbiA	1.80
PF03952	Enolase_N	1.80
PF02830	V4R	1.80
PF00355	Rieske	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0148	Enolase	Carbohydrate transport and metabolism [G]	1.80
COG1719	Predicted hydrocarbon binding protein, contains 4VR domain	General function prediction only [R]	1.80

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.76 %
Unclassified	root	N/A	43.24 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.76 %
Unclassified	root	N/A	43.24 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	54.95 %
Unclassified	root	N/A	43.24 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10012514	Not Available	3036	Open in IMG/M
3300002558\|JGI25385J37094_10189344	All Organisms → cellular organisms → Archaea	551	Open in IMG/M
3300002560\|JGI25383J37093_10182192	All Organisms → cellular organisms → Archaea	553	Open in IMG/M
3300002560\|JGI25383J37093_10204348	All Organisms → cellular organisms → Archaea	519	Open in IMG/M
3300002561\|JGI25384J37096_10101719	Not Available	1000	Open in IMG/M
3300002562\|JGI25382J37095_10111875	Not Available	945	Open in IMG/M
3300002562\|JGI25382J37095_10132679	Not Available	834	Open in IMG/M
3300002562\|JGI25382J37095_10210399	Not Available	587	Open in IMG/M
3300002908\|JGI25382J43887_10007249	All Organisms → cellular organisms → Archaea	5443	Open in IMG/M
3300002908\|JGI25382J43887_10202766	Not Available	953	Open in IMG/M
3300002908\|JGI25382J43887_10226355	Not Available	878	Open in IMG/M
3300002908\|JGI25382J43887_10281453	Not Available	744	Open in IMG/M
3300002908\|JGI25382J43887_10312226	All Organisms → cellular organisms → Archaea	681	Open in IMG/M
3300005167\|Ga0066672_10719456	All Organisms → cellular organisms → Archaea	637	Open in IMG/M
3300005175\|Ga0066673_10008837	All Organisms → cellular organisms → Archaea	4215	Open in IMG/M
3300005176\|Ga0066679_10409220	Not Available	888	Open in IMG/M
3300005176\|Ga0066679_10516453	Not Available	778	Open in IMG/M
3300005176\|Ga0066679_10605693	Not Available	714	Open in IMG/M
3300005180\|Ga0066685_10329205	Not Available	1059	Open in IMG/M
3300005180\|Ga0066685_11159732	All Organisms → cellular organisms → Archaea	502	Open in IMG/M
3300005181\|Ga0066678_10613858	Not Available	723	Open in IMG/M
3300005450\|Ga0066682_10510496	Not Available	761	Open in IMG/M
3300005450\|Ga0066682_10652440	Not Available	653	Open in IMG/M
3300005468\|Ga0070707_100226009	All Organisms → cellular organisms → Archaea	1822	Open in IMG/M
3300005552\|Ga0066701_10524804	Not Available	730	Open in IMG/M
3300005552\|Ga0066701_10565592	Not Available	696	Open in IMG/M
3300005552\|Ga0066701_10691411	All Organisms → cellular organisms → Archaea	613	Open in IMG/M
3300005555\|Ga0066692_10537792	Not Available	740	Open in IMG/M
3300005555\|Ga0066692_10622862	Not Available	675	Open in IMG/M
3300005557\|Ga0066704_10591505	Not Available	715	Open in IMG/M
3300005568\|Ga0066703_10529593	Not Available	695	Open in IMG/M
3300006791\|Ga0066653_10002528	All Organisms → cellular organisms → Archaea	5541	Open in IMG/M
3300006791\|Ga0066653_10045300	All Organisms → cellular organisms → Archaea	1808	Open in IMG/M
3300006796\|Ga0066665_10934456	Not Available	669	Open in IMG/M
3300006797\|Ga0066659_10953773	Not Available	717	Open in IMG/M
3300007265\|Ga0099794_10030593	All Organisms → cellular organisms → Archaea	2515	Open in IMG/M
3300007265\|Ga0099794_10441016	All Organisms → cellular organisms → Archaea	682	Open in IMG/M
3300009012\|Ga0066710_102734453	Not Available	702	Open in IMG/M
3300009012\|Ga0066710_103101240	All Organisms → cellular organisms → Archaea	643	Open in IMG/M
3300009038\|Ga0099829_10017749	All Organisms → cellular organisms → Archaea	4813	Open in IMG/M
3300009038\|Ga0099829_10959659	Not Available	709	Open in IMG/M
3300009038\|Ga0099829_11557822	All Organisms → cellular organisms → Archaea	545	Open in IMG/M
3300009088\|Ga0099830_10224996	Not Available	1476	Open in IMG/M
3300009088\|Ga0099830_10835655	All Organisms → cellular organisms → Archaea	760	Open in IMG/M
3300009089\|Ga0099828_10968146	Not Available	759	Open in IMG/M
3300009090\|Ga0099827_11388927	All Organisms → cellular organisms → Archaea	611	Open in IMG/M
3300009137\|Ga0066709_100040217	All Organisms → cellular organisms → Bacteria	5125	Open in IMG/M
3300009137\|Ga0066709_102614211	Not Available	676	Open in IMG/M
3300010122\|Ga0127488_1147561	All Organisms → cellular organisms → Archaea	794	Open in IMG/M
3300010336\|Ga0134071_10021116	All Organisms → cellular organisms → Archaea	2760	Open in IMG/M
3300010337\|Ga0134062_10041681	All Organisms → cellular organisms → Archaea	1847	Open in IMG/M
3300011271\|Ga0137393_11142894	Not Available	661	Open in IMG/M
3300012198\|Ga0137364_11045920	Not Available	616	Open in IMG/M
3300012206\|Ga0137380_10878096	Not Available	771	Open in IMG/M
3300012210\|Ga0137378_11760535	All Organisms → cellular organisms → Archaea	524	Open in IMG/M
3300012351\|Ga0137386_11126161	All Organisms → cellular organisms → Archaea	553	Open in IMG/M
3300012353\|Ga0137367_11146780	All Organisms → cellular organisms → Archaea	522	Open in IMG/M
3300012359\|Ga0137385_10791307	Not Available	788	Open in IMG/M
3300012362\|Ga0137361_10131935	All Organisms → cellular organisms → Archaea	2213	Open in IMG/M
3300012362\|Ga0137361_11397026	All Organisms → cellular organisms → Archaea	623	Open in IMG/M
3300012362\|Ga0137361_11882489	All Organisms → cellular organisms → Archaea	515	Open in IMG/M
3300012386\|Ga0134046_1265462	Not Available	752	Open in IMG/M
3300012407\|Ga0134050_1252489	Not Available	702	Open in IMG/M
3300012927\|Ga0137416_10632235	Not Available	935	Open in IMG/M
3300012927\|Ga0137416_10831217	Not Available	818	Open in IMG/M
3300015356\|Ga0134073_10138431	Not Available	759	Open in IMG/M
3300017659\|Ga0134083_10353663	Not Available	633	Open in IMG/M
3300018433\|Ga0066667_10009393	All Organisms → cellular organisms → Archaea	4602	Open in IMG/M
3300018433\|Ga0066667_11266776	All Organisms → cellular organisms → Archaea	643	Open in IMG/M
3300018468\|Ga0066662_10065363	All Organisms → cellular organisms → Archaea	2404	Open in IMG/M
3300018468\|Ga0066662_11977237	All Organisms → cellular organisms → Archaea	610	Open in IMG/M
3300018468\|Ga0066662_12358284	All Organisms → cellular organisms → Archaea	559	Open in IMG/M
3300018482\|Ga0066669_11285265	Not Available	662	Open in IMG/M
3300021046\|Ga0215015_10220643	All Organisms → cellular organisms → Archaea	541	Open in IMG/M
3300021046\|Ga0215015_10521618	All Organisms → cellular organisms → Archaea	730	Open in IMG/M
3300021171\|Ga0210405_10012251	All Organisms → cellular organisms → Archaea	7179	Open in IMG/M
3300026277\|Ga0209350_1035873	All Organisms → cellular organisms → Archaea	1466	Open in IMG/M
3300026296\|Ga0209235_1004990	All Organisms → cellular organisms → Bacteria	7418	Open in IMG/M
3300026296\|Ga0209235_1013644	All Organisms → cellular organisms → Archaea	4465	Open in IMG/M
3300026296\|Ga0209235_1035028	All Organisms → cellular organisms → Archaea	2553	Open in IMG/M
3300026296\|Ga0209235_1063973	All Organisms → cellular organisms → Archaea	1705	Open in IMG/M
3300026298\|Ga0209236_1000678	All Organisms → cellular organisms → Archaea	20061	Open in IMG/M
3300026309\|Ga0209055_1192671	All Organisms → cellular organisms → Archaea	625	Open in IMG/M
3300026313\|Ga0209761_1002352	All Organisms → cellular organisms → Archaea	12427	Open in IMG/M
3300026315\|Ga0209686_1140972	Not Available	758	Open in IMG/M
3300026315\|Ga0209686_1194808	Not Available	554	Open in IMG/M
3300026317\|Ga0209154_1048713	All Organisms → cellular organisms → Archaea	1893	Open in IMG/M
3300026317\|Ga0209154_1242280	All Organisms → cellular organisms → Archaea	637	Open in IMG/M
3300026318\|Ga0209471_1248009	All Organisms → cellular organisms → Archaea	615	Open in IMG/M
3300026332\|Ga0209803_1028510	All Organisms → cellular organisms → Archaea	2671	Open in IMG/M
3300026332\|Ga0209803_1197695	Not Available	744	Open in IMG/M
3300026332\|Ga0209803_1349177	All Organisms → cellular organisms → Archaea	513	Open in IMG/M
3300026333\|Ga0209158_1036033	All Organisms → cellular organisms → Archaea	2106	Open in IMG/M
3300026334\|Ga0209377_1012910	All Organisms → cellular organisms → Archaea	4557	Open in IMG/M
3300026335\|Ga0209804_1033025	All Organisms → cellular organisms → Archaea	2612	Open in IMG/M
3300026335\|Ga0209804_1261849	All Organisms → cellular organisms → Archaea	625	Open in IMG/M
3300026529\|Ga0209806_1207240	Not Available	678	Open in IMG/M
3300026529\|Ga0209806_1208662	Not Available	674	Open in IMG/M
3300026530\|Ga0209807_1102373	All Organisms → cellular organisms → Archaea	1232	Open in IMG/M
3300026536\|Ga0209058_1304916	All Organisms → cellular organisms → Archaea	548	Open in IMG/M
3300026540\|Ga0209376_1080841	All Organisms → cellular organisms → Archaea	1729	Open in IMG/M
3300026548\|Ga0209161_10325062	Not Available	710	Open in IMG/M
3300026548\|Ga0209161_10440786	Not Available	572	Open in IMG/M
3300026552\|Ga0209577_10072051	All Organisms → cellular organisms → Archaea	2862	Open in IMG/M
3300027643\|Ga0209076_1042280	All Organisms → cellular organisms → Archaea	1284	Open in IMG/M
3300027671\|Ga0209588_1052432	Not Available	1319	Open in IMG/M
3300027748\|Ga0209689_1087616	All Organisms → cellular organisms → Archaea	1634	Open in IMG/M
3300027846\|Ga0209180_10011992	All Organisms → cellular organisms → Archaea	4491	Open in IMG/M
3300028536\|Ga0137415_10670217	Not Available	849	Open in IMG/M
3300031820\|Ga0307473_10061628	All Organisms → cellular organisms → Archaea	1836	Open in IMG/M
3300032180\|Ga0307471_100436165	All Organisms → cellular organisms → Archaea	1446	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	96.40%
Loam	Environmental → Terrestrial → Soil → Loam	3.60%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	63.06%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.70%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	36.04%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	27.03%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	22.52%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.31%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010122	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012386	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012407	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_100125141	3300002558	Grasslands Soil	ISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDSALEGFQMLIAESFKPIGQEEQIVPDQRPIKRRSDENPKD*
JGI25385J37094_101893442	3300002558	Grasslands Soil	SLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGSERQIVPNQPIKRRSNEGPKD*
JGI25383J37093_101821922	3300002560	Grasslands Soil	ELAKLIGASKESLDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLISESFKPVGSETQLVPNLQPNKRRSDEDPKD*
JGI25383J37093_102043481	3300002560	Grasslands Soil	SLMKLCGLAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPVGSESQTDPNQRPIKRRSDENPKTIGS*
JGI25384J37096_101017192	3300002561	Grasslands Soil	LISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGSEGEIVPNQPIKRRSDESPKD*
JGI25382J37095_101118751	3300002562	Grasslands Soil	EADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGSEGQIVPNQQPIKRRSDERPKD*
JGI25382J37095_101326791	3300002562	Grasslands Soil	LISLMKLCGLAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPVGSESQTDPNQRPIKRRSDENPKTIGS*
JGI25382J37095_102103991	3300002562	Grasslands Soil	LCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGSEGEIVPNQPIKRRSDEGPKD*
JGI25382J43887_100072495	3300002908	Grasslands Soil	GFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGSEGEIVPNQPIKRRSDEGPKD*
JGI25382J43887_102027662	3300002908	Grasslands Soil	GFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGSEGQIVPNQQPIKRRSDERPKD*
JGI25382J43887_102263551	3300002908	Grasslands Soil	ASKESLDGKTSFYLISLMKLCGLAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPVGSESQTDPNQRPIKRRSDENPKTIGS*
JGI25382J43887_102814532	3300002908	Grasslands Soil	GFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGSEGEIVPNQPIKRRSDKSPKD*
JGI25382J43887_103122262	3300002908	Grasslands Soil	IYRGELAKLIGASKESLDGKTSFYLISLMKLCGLAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLISESFKPIGSEGQVVPNQQVIKRRSDETPKN*
Ga0066672_107194561	3300005167	Soil	GELAKLIGASKESLDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDSALEGFQMLIAESFKPIGQEEQIVPDQRPIKRRSDENPKD*
Ga0066673_100088371	3300005175	Soil	LDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDSALEGFQMLIAESFKPIGSEGEIVPNQPIKRRSDESPKD*
Ga0066679_104092201	3300005176	Soil	SLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGSETEAIPNQQSIRRRSDESRKD*
Ga0066679_105164531	3300005176	Soil	GELAKLIGASKESLDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDSALEGFQMLIAESFKPIGQEEQIVPDQRPIKRRSDESPKD*
Ga0066679_106056932	3300005176	Soil	MKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDSALEGFQMLIAESFKPIGQEEQIVPDQRPIKRRSDENPKD*
Ga0066685_103292052	3300005180	Soil	GELAKLIGASKESLDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGQEDQIVLDQRPIKRRSDESPKD*
Ga0066685_111597322	3300005180	Soil	LDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDSALEGFQMLIAESFKPIGQEEQIVPDLRPIKRRSDENPKD*
Ga0066678_106138581	3300005181	Soil	SFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDSALERFQMLIAESFKPIGQEEQIVPDQRPIKRRSDESPKD*
Ga0066682_105104962	3300005450	Soil	LDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDSALEGFQMLIAESFKPIGQEEQIVPDQRPIKRRSDENPKD*
Ga0066682_106524401	3300005450	Soil	LDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDSALEGFQMLIAESFKPIGQEDQIVLDQRPIKRRSDESPKD*
Ga0070707_1002260091	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	DGKTSLYLISLMKLCGLAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLISESFKPVGSESQPLPNQQPIKRRSDEDPKN*
Ga0066701_105248041	3300005552	Soil	KTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGQEDQIVPDQKPIKRRSDESPKD*
Ga0066701_105655922	3300005552	Soil	LISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGQEDQIVPDQKPIKRRPDDGPKD*
Ga0066701_106914111	3300005552	Soil	KLIGASKESLDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGQEEQIVPDQRPIKRRSDESPKD*
Ga0066692_105377921	3300005555	Soil	LDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGQEDQIVPDQRSIKRRSDESPKD*
Ga0066692_106228621	3300005555	Soil	AEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGSEGEIVPNQPIKRRSDESPKD*
Ga0066704_105915052	3300005557	Soil	SLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGSETEAILNQQSIRRRSDESRKD*
Ga0066703_105295932	3300005568	Soil	ISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGQEDQIVPDQKPIKRRSDESPKD*
Ga0066653_100025281	3300006791	Soil	SLDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDSALEGFQMLIAESFKPIGQEEQIVPDQRPIKRRSDENPKD*
Ga0066653_100453001	3300006791	Soil	SLDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDSALEGFQMLIAESFKPIGSEGEIVPNQPIKRRSDESPKD*
Ga0066665_109344561	3300006796	Soil	KGELAKLIGASKESLDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDSALEGFQMLIAESFKPIGQEEQIVPDQRPIKRRSDESPKD*
Ga0066659_109537732	3300006797	Soil	GKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGQEDQIVPDQKPIKRRSDESPKD*
Ga0099794_100305931	3300007265	Vadose Zone Soil	SLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLISESFKPVGAETQAVPNQQPIKRRSDENSKTSSN*
Ga0099794_104410161	3300007265	Vadose Zone Soil	GELAKLIGASKESLDGKTSFYLISLMKLCGLAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLISESFKPIGSENHGVLSQPPVKRRSDENPKTSGS*
Ga0066710_1027344532	3300009012	Grasslands Soil	YLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGLEDQIVPDQKPIKRRPDDGPKD
Ga0066710_1031012401	3300009012	Grasslands Soil	KGELAKLIGASKESLDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDSALEGFQMLIAESFKPIGQEEQIVPDQRPIKRRSDESPKD
Ga0099829_100177491	3300009038	Vadose Zone Soil	DMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQTLIAESFKPVGSESQGVPNQQLIKRRSDENPKTSGS*
Ga0099829_109596592	3300009038	Vadose Zone Soil	EADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPVGSESQGVPNQQPIKRRSDENPRTRRS*
Ga0099829_115578222	3300009038	Vadose Zone Soil	IYRGELAKLIGASKESLDGKTSFYLISLMKLCGLAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPVGSDSQGVPNQQPIKKRSDENPRTRRS*
Ga0099830_102249962	3300009088	Vadose Zone Soil	MKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLISESFKPIGSEGQVVPDQQPIKRRSNESPKD*
Ga0099830_108356551	3300009088	Vadose Zone Soil	GELAKLIGASKESLDGKTSFYLISLMKLCGLAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQTLIAESFKPVGSESQGVPNQQLIKRRSDENPKTSGS*
Ga0099828_109681461	3300009089	Vadose Zone Soil	DGKTSFYLISLMKLCGLAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPVGSESQGVPNQQPIKRRSDENPKTGGS*
Ga0099827_113889271	3300009090	Vadose Zone Soil	KESLDGKTSFYLISLMKLCGLAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGSEGEIVPNQPIKRRPNEGPKD*
Ga0066709_1000402171	3300009137	Grasslands Soil	SLDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDSALEGFQMLIAESFKPIGQEEQIVPDLRPIKRRSDENPKD*
Ga0066709_1026142112	3300009137	Grasslands Soil	GFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGLEDQIVPDQKPIKRRPDDGPKD*
Ga0127488_11475612	3300010122	Grasslands Soil	LAKLIGASKESLDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDSALEGFQMLIAESFKPIGQEEQIVPDQRPIKRRSDENPKD*
Ga0134071_100211162	3300010336	Grasslands Soil	LMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPLGSESQANPNQRPIKRRSDENPKTSGG*
Ga0134062_100416811	3300010337	Grasslands Soil	LISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDSALEGFQMLIAESFKPIGQEEQIVPDLRPIKRRSDENPKD*
Ga0137393_111428941	3300011271	Vadose Zone Soil	IGASKESLDGKTSFYLISLMKLCGLAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLISESFKPVGSENPGLPNQQPIKRRSDENPKN*
Ga0137364_110459201	3300012198	Vadose Zone Soil	KTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDSALEGFQMLIAESFKPIGQEEQIVPAQRPIKRRSDENPKD*
Ga0137380_108780961	3300012206	Vadose Zone Soil	SLDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGLEDQIVPDQKPIKRRPDDGPKD*
Ga0137378_117605352	3300012210	Vadose Zone Soil	RIYRGELAKMIGASKESLDGKTSLYLISLMKLCGLAEADMAKVLKKSKIVNQRGAVTRDISGGEELKGVIDNALEGFQTLISESFRPIGHEMLPVPDQSSKKKPSEESKD*
Ga0137386_111261612	3300012351	Vadose Zone Soil	GASKESLDGKTSFYLISLMKLCGLAEADMAKVLKKSKIVNQRGAVTRDISGGEELKGVIDNALEGFQTLISESFRPTGHEMLPVPDQSSKKKTSEESKD*
Ga0137367_111467801	3300012353	Vadose Zone Soil	GKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDSALEGFQMLIAESFKPIGQEEQIVPDQRPIKRRSDENPKD*
Ga0137385_107913071	3300012359	Vadose Zone Soil	TSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGQEDQIVPDQKPIKRRPDDGPKD*
Ga0137361_101319351	3300012362	Vadose Zone Soil	RGELAKLIGASKESLDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGQEAQIVPDQQPIKRRPDDRPKD*
Ga0137361_113970262	3300012362	Vadose Zone Soil	ELAKLIGASKESLDGKTSFYLISLMKLCGLAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPVGSDSQGVPNQQPIKKRSDENPRTRRS*
Ga0137361_118824891	3300012362	Vadose Zone Soil	ELAKLIGASKESLDGKTSFYLISLMKLCGLAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPVGSESQTDPNQRPIKRRSDENPKTIGS*
Ga0134046_12654621	3300012386	Grasslands Soil	TSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDSALEGFQMLIAESFKPIGQEEQIVPDQRPIKRRSDENPKD*
Ga0134050_12524891	3300012407	Grasslands Soil	DMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDSALEGFQMLIAESFKPIGQEEQVVPDQRPIKRRSDENPKD*
Ga0137416_106322352	3300012927	Vadose Zone Soil	YLISLMKLCGLAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGQEAQIVPDQQPIKRRPDDRPKD*
Ga0137416_108312172	3300012927	Vadose Zone Soil	KTSFYLISLMKLCGLAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLISESFKPVGAETQAVPNQQPIKRRSIENQKTSGS*
Ga0134073_101384311	3300015356	Grasslands Soil	KLIGASKESLDGKTSLYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGQEEQIVPDQRPIKRRSDENPKD*
Ga0134083_103536632	3300017659	Grasslands Soil	LDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLISESFKPVGSETQLVPNLQPNKRRSDEDPKD
Ga0066667_100093931	3300018433	Grasslands Soil	SLDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDSALEGFQMLIAESFKPIGQEEQIVPDLRPIKRRSDENPKD
Ga0066667_112667761	3300018433	Grasslands Soil	KGELAKLIGASKESLDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDSALEGFQMLIAESFKPIGQEEQIVPDQRPIKRRSDENPKD
Ga0066662_100653633	3300018468	Grasslands Soil	CGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDSALEGFQMLIAESFKPIGQEEQIVPDQRPIKRRSDENPKD
Ga0066662_119772372	3300018468	Grasslands Soil	AKLIGASKESLDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGQEEQIVPDQRPIKRRSDESPKD
Ga0066662_123582841	3300018468	Grasslands Soil	SLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGSETEAILNQQSIRRRSDESRKD
Ga0066669_112852652	3300018482	Grasslands Soil	MKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDSALEGFQMLIAESFKPIGQEEQIVPDLRPIKRRSDENPKD
Ga0215015_102206432	3300021046	Soil	MKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQTLISESFKPVGSENQGVPNQQSNKRRSDAEPKH
Ga0215015_105216181	3300021046	Soil	MKLCGFAEADMSKVLKKSRIVNQRGAVTRDISAGEELKGVIDSALEGFQMLISESFRPVGSEIQRVPDQQPNKRRSADDPKTEL
Ga0210405_100122511	3300021171	Soil	KLIGASKESLDGKTSLYLISLMKLCGLAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLISESFKPIGSENHGVPNQPPTKRRADDNPKTSGS
Ga0209350_10358733	3300026277	Grasslands Soil	ESLDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDSALEGFQMLIAESFKPIGSEGEIVPNQPIKRRSDESPKD
Ga0209235_10049901	3300026296	Grasslands Soil	GASKESLDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDSALEGFQMLIAESFKPIGQEEQIVPDQRPIKRRSDENPKD
Ga0209235_10136441	3300026296	Grasslands Soil	YKGELAKLIGASKESLDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDSALEGFQMLIAESFKPIGQEEQIVPDQRPIKRRSDENQKD
Ga0209235_10350281	3300026296	Grasslands Soil	LDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGSEGEIVPNQPIKRRSDESPKD
Ga0209235_10639733	3300026296	Grasslands Soil	GASKESLDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLISESFKPVGSETQLVPNLQPNKRRSDEDPKD
Ga0209236_10006781	3300026298	Grasslands Soil	GASKESLDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDSALEGFQMLIAESFKPIGQEEQIVPDQRPIKRRSDESPKD
Ga0209055_11926712	3300026309	Soil	LAKLIGASKESLDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGSEGEIVPNQPIKRRSDESPKD
Ga0209761_100235215	3300026313	Grasslands Soil	ESLDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGSEGEIVPNQPIKRRSDESPKD
Ga0209686_11409721	3300026315	Soil	SKESLDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDSALEGFQMLIAESFKPIGQEEQIVPDQRPIKRRSDESPKD
Ga0209686_11948082	3300026315	Soil	SLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGQEDQIVLDQRPIKRRSDESPKD
Ga0209154_10487133	3300026317	Soil	LAKLIGASKESLDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGQEDQIVPDQKPIKRRSDESPKD
Ga0209154_12422802	3300026317	Soil	LAKLIGASKESLDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGQEEQIVPDQRPIKRRSDESPKD
Ga0209471_12480091	3300026318	Soil	KLIGASKESLDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGQEEQIVPDQRPIKRRSDESPKD
Ga0209803_10285103	3300026332	Soil	ESLDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDSALEGFQMLIAESFKPIGQEEQIVPDQRPIKRRSDENPKD
Ga0209803_11976952	3300026332	Soil	DGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGQEDQIVPDQKPIKRRSDESPKD
Ga0209803_13491771	3300026332	Soil	GASKESLDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDSALEGFQMLIAESFKPIGQEEQIVPDQRPIRRRSDENPKD
Ga0209158_10360333	3300026333	Soil	LAKLIGASKESLDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDSALEGFQMLIAESFKPIGQEEQIVPDQRPIKRRSDENPKD
Ga0209377_10129101	3300026334	Soil	ESLDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGQEDQIVPDQRSIKRRSDESPKD
Ga0209804_10330251	3300026335	Soil	YKGELAKLIGASKESLDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDSALEGFQMLIAESFKPIGQEEQIVPDQRPIKRRSDENPKD
Ga0209804_12618492	3300026335	Soil	LAKLIGASKESLDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDSALEGFQMLIAESFKPIGSEGEIVPNQPIKRRSDESPKD
Ga0209806_12072401	3300026529	Soil	SLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGQEDQIVPDQKPIKRRSDESPKD
Ga0209806_12086621	3300026529	Soil	LCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDSALEGFQMLIAESFKPIGQEEQIVPDQRPIKRRSDENPKD
Ga0209807_11023733	3300026530	Soil	GASKESLDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGSEGEIVPNQPIKRRSDESPKD
Ga0209058_13049161	3300026536	Soil	ASKESLDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGQEDQIVLDQRPIKRRSDESPKD
Ga0209376_10808413	3300026540	Soil	MAILARVPPQILEDLVKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGQEDQIVLDQRPIKRRSDESPKD
Ga0209161_103250621	3300026548	Soil	FYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGQEDQIVPDQKPIKRRPDDGPKD
Ga0209161_104407862	3300026548	Soil	CGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGSEGEIVPNQPIKRRSDESPKD
Ga0209577_100720513	3300026552	Soil	YKGELAKLIGASKESLDGKTSFYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDSALEGFQMLIAESFKPIGSEGEIVPNQPIKRRSDESPKD
Ga0209076_10422803	3300027643	Vadose Zone Soil	GKTSLYLISLMKLCGFAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPLGSESQASPNQRPIKRRSDENPKN
Ga0209588_10524323	3300027671	Vadose Zone Soil	AKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLISESFKPVGAETQAVPNQQPIKRRSDENSKTSSN
Ga0209689_10876161	3300027748	Soil	FAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDSALEGFQMLIAESFKPIGQEEQIVPDQRPIKRRSDENPKD
Ga0209180_100119921	3300027846	Vadose Zone Soil	KESLDGKTSFYLISLMKLCGLAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPVGSESQGVPNQQPIKRRSDENPRTRRS
Ga0137415_106702171	3300028536	Vadose Zone Soil	KTSFYLISLMKLCGLAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLISESFKPVGAETQAVPNQQPIKRRSDENQKTSGS
Ga0307473_100616281	3300031820	Hardwood Forest Soil	KLIGASKESLDGKTSLYLISLMKLCGFAEADMAKVLTKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQTLISESFKPIGSENQTVPDQQSNKRRTDSLRNREN
Ga0307471_1004361651	3300032180	Hardwood Forest Soil	SFYLISLMKLCGLAEADMAKVLKKSRIVNQRGAVTRDISAGEELKGVIDNALEGFQMLIAESFKPIGSENHGVLNQPPVKRRSDENPKTSGS

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085508

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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