NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F085635

Metagenome / Metatranscriptome Family F085635

Go to section:
Overview Alignments Structure & Topology Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F085635
Family Type Metagenome / Metatranscriptome
Number of Sequences 111
Average Sequence Length 97 residues
Representative Sequence IVPHTTSRNKLDENLGLEALIPPVVRSGSLRLPSMSGNWKTLALVDELVTWTRDKKRGTDLAMALWFMLLHAPKLTTPKLPPRMWRPSFMLDG
Number of Associated Samples 86
Number of Associated Scaffolds 111

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Viruses
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 93.69 %
Associated GOLD sequencing projects 70
AlphaFold2 3D model prediction Yes
3D model pTM-score0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Duplodnaviria (83.784 % of family members)
NCBI Taxonomy ID 2731341
Taxonomy All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(51.351 % of family members)
Environment Ontology (ENVO) Unclassified
(58.559 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(72.072 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 40.50%    β-sheet: 0.00%    Coil/Unstructured: 59.50%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.27
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.30 %
UnclassifiedrootN/A2.70 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002488|JGI25128J35275_1020577All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1630Open in IMG/M
3300003394|JGI25907J50239_1023059All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1370Open in IMG/M
3300004240|Ga0007787_10500572All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes608Open in IMG/M
3300004240|Ga0007787_10549935All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes578Open in IMG/M
3300005805|Ga0079957_1265776All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes788Open in IMG/M
3300006025|Ga0075474_10232836All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes558Open in IMG/M
3300006026|Ga0075478_10040000All Organisms → Viruses → Predicted Viral1551Open in IMG/M
3300006026|Ga0075478_10101218All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes920Open in IMG/M
3300006637|Ga0075461_10077879All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1055Open in IMG/M
3300006637|Ga0075461_10225285All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes555Open in IMG/M
3300006637|Ga0075461_10244214All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes528Open in IMG/M
3300006802|Ga0070749_10277587All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes944Open in IMG/M
3300006810|Ga0070754_10370488All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes631Open in IMG/M
3300006867|Ga0075476_10007935All Organisms → cellular organisms → Bacteria4842Open in IMG/M
3300006868|Ga0075481_10085742All Organisms → Viruses → Predicted Viral1179Open in IMG/M
3300006868|Ga0075481_10289278All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes573Open in IMG/M
3300006869|Ga0075477_10215928All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes781Open in IMG/M
3300006869|Ga0075477_10436078All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes506Open in IMG/M
3300006870|Ga0075479_10312050All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes616Open in IMG/M
3300006874|Ga0075475_10315281All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes642Open in IMG/M
3300006917|Ga0075472_10038080All Organisms → Viruses → Predicted Viral2257Open in IMG/M
3300006919|Ga0070746_10094811All Organisms → Viruses → Predicted Viral1494Open in IMG/M
3300006919|Ga0070746_10144338All Organisms → Viruses → Predicted Viral1162Open in IMG/M
3300007234|Ga0075460_10125339All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes908Open in IMG/M
3300007344|Ga0070745_1207512All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes721Open in IMG/M
3300007345|Ga0070752_1115705All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1133Open in IMG/M
3300007346|Ga0070753_1106063All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1093Open in IMG/M
3300007346|Ga0070753_1114390All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1043Open in IMG/M
3300007538|Ga0099851_1093366All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1150Open in IMG/M
3300007539|Ga0099849_1077042All Organisms → Viruses → Predicted Viral1354Open in IMG/M
3300007539|Ga0099849_1346962All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes528Open in IMG/M
3300007541|Ga0099848_1187218All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes748Open in IMG/M
3300007541|Ga0099848_1192430All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes735Open in IMG/M
3300007541|Ga0099848_1200692All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes716Open in IMG/M
3300007542|Ga0099846_1185768Not Available738Open in IMG/M
3300007640|Ga0070751_1220298All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes730Open in IMG/M
3300007640|Ga0070751_1258938All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes658Open in IMG/M
3300007960|Ga0099850_1228567All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes723Open in IMG/M
3300007960|Ga0099850_1229327All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes721Open in IMG/M
3300008012|Ga0075480_10607997All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes517Open in IMG/M
3300010296|Ga0129348_1170884All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes747Open in IMG/M
3300010300|Ga0129351_1349404All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes555Open in IMG/M
3300010300|Ga0129351_1365107All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes540Open in IMG/M
3300010318|Ga0136656_1059566All Organisms → Viruses → Predicted Viral1367Open in IMG/M
3300010354|Ga0129333_10351152All Organisms → Viruses → Predicted Viral1312Open in IMG/M
3300010354|Ga0129333_10670965All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes893Open in IMG/M
3300010370|Ga0129336_10473497All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes677Open in IMG/M
3300012017|Ga0153801_1086144All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes553Open in IMG/M
(restricted) 3300013126|Ga0172367_10563438All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes617Open in IMG/M
3300016740|Ga0182096_1153052All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes2701Open in IMG/M
3300017701|Ga0181364_1032222All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes846Open in IMG/M
3300017949|Ga0181584_10783995All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes565Open in IMG/M
3300017950|Ga0181607_10620966All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes567Open in IMG/M
3300017951|Ga0181577_10736446All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes598Open in IMG/M
3300017952|Ga0181583_10173205All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1429Open in IMG/M
3300017958|Ga0181582_10431661All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes833Open in IMG/M
3300017967|Ga0181590_10535017All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes811Open in IMG/M
3300017967|Ga0181590_11054977All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes527Open in IMG/M
3300017990|Ga0180436_11225774All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes574Open in IMG/M
3300017990|Ga0180436_11566193All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes509Open in IMG/M
3300017992|Ga0180435_11264810All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes634Open in IMG/M
3300017992|Ga0180435_11684886All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes551Open in IMG/M
3300017992|Ga0180435_11727112All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes545Open in IMG/M
3300018080|Ga0180433_11033330All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes599Open in IMG/M
3300018421|Ga0181592_10174250All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1625Open in IMG/M
3300018423|Ga0181593_10216884All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1499Open in IMG/M
3300018424|Ga0181591_10604174All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes785Open in IMG/M
3300018424|Ga0181591_10791951All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes659Open in IMG/M
3300019732|Ga0194014_1074367All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes504Open in IMG/M
3300019756|Ga0194023_1063172All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes743Open in IMG/M
3300019756|Ga0194023_1135520Not Available504Open in IMG/M
3300019765|Ga0194024_1153492All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes541Open in IMG/M
3300019784|Ga0181359_1259126All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes523Open in IMG/M
3300021959|Ga0222716_10102639All Organisms → Viruses → Predicted Viral1929Open in IMG/M
3300021960|Ga0222715_10004271All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes12467Open in IMG/M
3300021961|Ga0222714_10156198All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1363Open in IMG/M
3300021964|Ga0222719_10022176All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes5060Open in IMG/M
3300022057|Ga0212025_1052113All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes706Open in IMG/M
3300022176|Ga0212031_1041652All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes762Open in IMG/M
3300022200|Ga0196901_1128116All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes862Open in IMG/M
3300022200|Ga0196901_1241797All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes563Open in IMG/M
3300024503|Ga0255152_1035680All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes915Open in IMG/M
3300025445|Ga0208424_1001424All Organisms → Viruses → Predicted Viral2680Open in IMG/M
3300025646|Ga0208161_1108551All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes753Open in IMG/M
3300025647|Ga0208160_1107359Not Available717Open in IMG/M
3300025653|Ga0208428_1058360All Organisms → Viruses → Predicted Viral1155Open in IMG/M
3300025671|Ga0208898_1076486All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1093Open in IMG/M
3300025687|Ga0208019_1117241All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes793Open in IMG/M
3300025751|Ga0208150_1138628All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes777Open in IMG/M
3300025759|Ga0208899_1046473All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1891Open in IMG/M
3300025759|Ga0208899_1099090All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1092Open in IMG/M
3300025759|Ga0208899_1136899All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes857Open in IMG/M
3300025771|Ga0208427_1043931All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1667Open in IMG/M
3300025771|Ga0208427_1268414All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes519Open in IMG/M
3300025815|Ga0208785_1150788All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes532Open in IMG/M
3300025818|Ga0208542_1116050All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes756Open in IMG/M
3300025828|Ga0208547_1070145All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1146Open in IMG/M
3300025840|Ga0208917_1111730All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes986Open in IMG/M
3300025889|Ga0208644_1191345All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes898Open in IMG/M
3300027808|Ga0209354_10171066All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes885Open in IMG/M
3300027917|Ga0209536_100380268All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1765Open in IMG/M
3300029933|Ga0119945_1011339All Organisms → Viruses → Predicted Viral1151Open in IMG/M
3300031539|Ga0307380_10663110All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes886Open in IMG/M
3300031951|Ga0315904_11395613All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes523Open in IMG/M
3300032050|Ga0315906_10475068All Organisms → Viruses → Predicted Viral1065Open in IMG/M
3300033557|Ga0316617_101526860All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes674Open in IMG/M
3300034073|Ga0310130_0034412All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1550Open in IMG/M
3300034092|Ga0335010_0248620All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1051Open in IMG/M
3300034112|Ga0335066_0564518All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes594Open in IMG/M
3300034118|Ga0335053_0677558All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes583Open in IMG/M
3300034375|Ga0348336_020068All Organisms → Viruses → Predicted Viral3498Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous51.35%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh10.81%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient6.31%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake5.41%
Hypersaline Lake SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment5.41%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater3.60%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water3.60%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater2.70%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater1.80%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment0.90%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater0.90%
LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake0.90%
AquaticEnvironmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic0.90%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater0.90%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine0.90%
Marine SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment0.90%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.90%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil0.90%
Fracking WaterEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water0.90%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002488Marine viral communities from the Pacific Ocean - ETNP_2_60EnvironmentalOpen in IMG/M
3300003394Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SNEnvironmentalOpen in IMG/M
3300004240Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SNEnvironmentalOpen in IMG/M
3300005805Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USAEnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006026Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006637Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNAEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006867Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300006868Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006869Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006870Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006874Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006917Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300007234Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNAEnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007346Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007541Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaGEnvironmentalOpen in IMG/M
3300007542Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaGEnvironmentalOpen in IMG/M
3300007640Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28EnvironmentalOpen in IMG/M
3300007960Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaGEnvironmentalOpen in IMG/M
3300008012Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300010296Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNAEnvironmentalOpen in IMG/M
3300010300Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNAEnvironmentalOpen in IMG/M
3300010318Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNAEnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300010370Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNAEnvironmentalOpen in IMG/M
3300012017Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Top - Depth 1mEnvironmentalOpen in IMG/M
3300013126 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_10mEnvironmentalOpen in IMG/M
3300016740Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041413YT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017701Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.S.NEnvironmentalOpen in IMG/M
3300017949Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017950Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017951Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017952Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017958Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017967Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017990Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_S_2 metaGEnvironmentalOpen in IMG/M
3300017992Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_S_1 metaGEnvironmentalOpen in IMG/M
3300018080Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_1 metaGEnvironmentalOpen in IMG/M
3300018421Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018423Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018424Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019732Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRC_0-1_MGEnvironmentalOpen in IMG/M
3300019756Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW6Sep16_MGEnvironmentalOpen in IMG/M
3300019765Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW13Sep16_MGEnvironmentalOpen in IMG/M
3300019784Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022057Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v2)EnvironmentalOpen in IMG/M
3300022176Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022200Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300024503Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepC_8hEnvironmentalOpen in IMG/M
3300025445Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025646Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025647Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025653Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025671Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)EnvironmentalOpen in IMG/M
3300025687Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025751Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025771Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025815Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025818Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025828Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025840Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300027808Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)EnvironmentalOpen in IMG/M
3300027917Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)EnvironmentalOpen in IMG/M
3300029933Aquatic microbial communities from drinking water treatment plant in Pearl River Delta area, China - influent_20120727_2EnvironmentalOpen in IMG/M
3300031539Soil microbial communities from Risofladan, Vaasa, Finland - UN-3EnvironmentalOpen in IMG/M
3300031951Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120EnvironmentalOpen in IMG/M
3300032050Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122EnvironmentalOpen in IMG/M
3300033557Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_BEnvironmentalOpen in IMG/M
3300034073Fracking water microbial communities from deep shales in Oklahoma, United States - MC-6-XLEnvironmentalOpen in IMG/M
3300034092Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2012-rr0069EnvironmentalOpen in IMG/M
3300034112Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Aug2014-rr0191EnvironmentalOpen in IMG/M
3300034118Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Aug2017-rr0165EnvironmentalOpen in IMG/M
3300034375Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI25128J35275_102057713300002488MarineQALRQVMVIPHTTSRNKMDENLGLEALIPSVVRSGSLRLPSMSNNWKTLALVQELETWTRDKKKGTDLAMALWFMLLHAPKLTEPKLPPRMWRPSFLVNS*
JGI25907J50239_102305953300003394Freshwater LakeNKLDENLGLEALIPPIVRSGSLRLPTLSGNWKTLALIEELCSWTKDKKKGTDLAMSLWFTLLHAPRLSAPRLPAQRWRPSWL*
Ga0007787_1050057223300004240Freshwater LakeTSRNKLDENLGLEALIPPVVRSGSLRLPTLTANWKTLALVEELSTWTKDKKRGTDLAMALWFTLLHAPKLTEPKLPPRQWRPSWL*
Ga0007787_1054993523300004240Freshwater LakeTSRNKLDENLGLEALIPPVVRSGSLRLPTLTANWKTLALVEELSTWTKDKKRGTDLAMALWFTLLHAPKLTEPKLPPRMWRPSFLAG*
Ga0079957_126577613300005805LakeTTSRNKLDENLGLEALIPPVVRSGSLRLPTLTANWKTLALIEELCSWTKDKRKGTDLAMALWFTLLHAPKLSEPKLPPQMWRPSWLSA*
Ga0075474_1023283623300006025AqueousRFLLAHDFVRRWQALTGVTIVPHTTSRNKLDENLGLEALIPPVVRSGSLRLPSMSGNWKTLALVDELVTWTRDKKRGTDLAMALWFMLLHAPKLTTPKLPPRMWRPSFMLDG*
Ga0075478_1004000023300006026AqueousTIVPHTTARNKIDENLGVEALIPPVVRTGSLRLPTLTANWKTLALVDELTTWTRDKKKGTDLTMALWFMLLHAPKLTDPKLPPRMWRPSFLAG*
Ga0075478_1010121833300006026AqueousTIVPHTTARNKIDENLGVEALIPPVVRTGSLRLPTMTANWKTLALVEELTTWTKDKKKGTDLTMALWFMLLHAPKLTDPKLPPRMWRPSFLAG*
Ga0075461_1007787913300006637AqueousNAAQRFLLAHDFVRRWQATRQVTIVPHTTARNKIDENLGVEALIPPVVRTGSLRLPTLTANWKTLALVDELTTWTRDKKKGTDLTMALWFMLLHAPKLTDPKLPPRMWRPSFLAG*
Ga0075461_1022528523300006637AqueousTARNKIDENLGVEALIPPVVRTGSLRLPTLTANWKTLALVDELTTWTRDKRKGTDLTMALWFMLLHAPKLTDPKLPPRMWRPSFLAG*
Ga0075461_1024421413300006637AqueousAQRFLLAHDFVRRWQASRGVLVVPHTTSRNKLDENLGLEALIPPVVRSGSLRLPTLTANWKTLALIEELCSWTKDKRKGTDLAMALWFTLLHAPKLSEPKLPPQMWRPSWLSA*
Ga0070749_1027758713300006802AqueousKNKLDQNLGLEALIPPVVRSGSLRLPTMSGNWKTLALVQELETWTRDKKKGTDLAMALWFMLLHAPKLTQPKLPPRMWRPSFLARD*
Ga0070754_1037048813300006810AqueousNKLDENLGLEALIPPVVRSGSLRLPSMSGNWKTLALVDELVTWTRDKKRGTDLAMALWFMLLHAPKLTTPKLPPRMWRPSFMLDA*
Ga0075476_1000793553300006867AqueousVNAAQRFLLAHDFVRRWQATRQVTIVPHTTARNKIDENLGVEALIPPVVRTGSLRLPTMTANWKTLALVEELTTWTKDKKKGTDLTMALWFMLLHAPKLTDPKLPPRMWRPSFLAG*
Ga0075481_1008574213300006868AqueousHDFVRRWQATRQVTIVPHTTARNKIDENLGVEALIPPVVRTGSLRLPTLTANWKTLALVDELTTWTRDKKKGTDLTMALWFMLLHAPKLTDPKLPPRMWRPSFLAG*
Ga0075481_1028927823300006868AqueousKLDQNLGLEALIPPVVRSGSLRLPTMSGNWKTLALVQELETWTRDKKKGTDLAMALWFMLLHAPKLTQPKLPPRMWRPSFLARD*
Ga0075477_1021592823300006869AqueousGVTIVPHTTSRNKLDENLGLEALIPPVVRSGSLRLPSMSGNWKTLALVDELVTWTRDKKRGTDLAMALWFMLLHAPKLTTPKLPPRMWRPSFMLDG*
Ga0075477_1043607813300006869AqueousLLAHDFVRRWQALTGVTIVPHTTSRNKLDENLGLEALIPPVVRSGSLRLPSMSGNWKTLALVDELVTWTRDKKRGTDLAMALWFMLLHAPKLTTPKLPPRMWRPSFMLDG*
Ga0075479_1031205023300006870AqueousQNLGLEALIPPVVRSGSLRLPTMSGNWKTLALVQELETWTRDKKKGTDLAMALWFMLLHAPKLTQPKLPPRMWRPSFLARD*
Ga0075475_1031528123300006874AqueousGVEALIPPVVRTGSLRLPTLTANWKTLALVDELTTWTRDKKKGTDLTMALWFMLLHAPKLTDPKLPPRMWRPSFLAG*
Ga0075472_1003808013300006917AqueousNAAQRFLLAHDFVRRWQASRGVLVVPHTTSRNKLDENLGLEALIPPVVRSGSLRLPTLTANWKTLALIEELCSWTKDKRKGTDLAMALWFTLLHAPKLSEPKLPPQMWRPSWLSA*
Ga0070746_1009481113300006919AqueousHDFVRRWQALRQVQIIPHTTARNKLDENLGIEALIPNVARSGSLRLPSMSGNWKTLALVQEMESWTKDKKRGTDLVMALWFMLLHAPKLAAPTLPPKLWRPSFLAS*
Ga0070746_1014433823300006919AqueousWQATRQVTIVPHTTARNKIDENLGVEALIPPVVRTGSLRLPTLTANWKTLALVDELTTWTRDKKKGTDLTMALWFMLLHAPKLTDPKLPPRMWRPSFLAG*
Ga0075460_1012533913300007234AqueousALIPPVVRSGSLRLPSMSGNWKTLALVDELVTWTRDKKRGTDLAMALWFMLLHAPKLTTPKLPPRMWRPSFMLDG*
Ga0070745_120751223300007344AqueousTIVPHTTSRNKLDENLGLEALIPPVVRSGSLRLPSMSGNWKTLALVDELVTWTKDKKRGTDLAMALWFMLLHAPKLTTPKLPPRMWRPSFMLDE*
Ga0070752_111570513300007345AqueousHDFVRRWQALTGVTIVPHTTSRNKLDENLGLEALIPPVVRSGSLRLPSMSGNWKTLALVDELVTWTKDKKRGTDLAMALWFMLLHAPKLTTPKLPPRMWRPSFMLDE*
Ga0070753_110606333300007346AqueousSKNKLDQNLGLEALIPPVVRSGSLRLPTMSGNWKTLALVQELETWTRDKKKDTDLAMALWFMLLHAPKLTQPKLPPRMWRPSFLTAD*
Ga0070753_111439013300007346AqueousNKLDQNLGLEALIPPVVRSGSLRLPTMSGNWKTLALVQELETWTRDKKKGTDLAMALWFMLLHAPKLTQPKLPPRMWRPSFLFNA*
Ga0099851_109336613300007538AqueousAHDFVRRWQATRQVTIVPHTTARNKIDENLGVEALIPPVVRTGSLRLPTLTANWKTLALVDELTTWTRDKKKGTDLTMALWFMLLHAPKLTDPKLPPRMWRPSFLAG*
Ga0099849_107704223300007539AqueousRNKIDENLGVEALIPPVVRTGSLRLPTLTANWKTLALVDELTTWTRDKKKGTDLTMALWFMLLHAPKLTDPKLPPRMWRPSFLAG*
Ga0099849_134696223300007539AqueousVPHTTARNKIDENLGVEALIPPVVRTGSLRLPTMTANWKTLALVEELTTWTKDKKKGTDLTMALWFMLLHAPKLTDPKLPPRMWRPSFLAG*
Ga0099848_118721823300007541AqueousRRWQALTGVTIVPHTTSRNKLDENLGLEALIPPVVRSGSLRLPSMSGNWKTLALVDELVTWTKDKKRGTDLAMALWFMLLHAPKLTTPKLPPRMWRPSFMLDE*
Ga0099848_119243013300007541AqueousIVPHTTSRNKLDENLGLEALIPPVVRSGSLRLPSMSGNWKTLALVDELVTWTRDKKRGTDLAMALWFMLLHAPKLTTPKLPPRMWRPSFMLDG*
Ga0099848_120069213300007541AqueousSRNKLDENLGLEALIPPVVRSGSLRLPSMSGNWKTLALVDELVTWTRDKKRGTDLAMALWFMLLHAPKLTTPKLPPRMWRPSFMLDG*
Ga0099846_118576833300007542AqueousLIPPVVRTGSLRLPTLTANWKTLALVDELTTWTRDKKKGTDLTMALWFMLLHAPKLTDPKLPPRMWRPSFLAG*
Ga0070751_122029823300007640AqueousVRRWQALTGVTIVPHTTSRNKLDENLGLEALIPPVVRSGSLRLPSMSGNWKTLALVDELVTWTKDKKRGTDLAMALWFMLLHAPKLTTPKLPPRMWRPSFMLDE*
Ga0070751_125893813300007640AqueousRWQALRGVMIIPHTTSKNKLDQNLGLEALIPPVVRSGSLRLPTMSGNWKTLALVQELETWTRDKKKGTDLAMALWFMLLHAPKLTQPKLPPRMWRPSFLARD*
Ga0099850_122856713300007960AqueousDENLGLEALIPPVVRSGSLRLPSMSGNWKTLALVDELVTWTRDKKRGTDLAMALWFMLLHAPKLTTPKLPPRMWRPSFMLDG*
Ga0099850_122932713300007960AqueousQRFLLAHDFVRRWQASRQVTVIPHTTSRNKLDENLGVEAFIPNVVRSGSLRLPSMSGNWKTLALVQEMESWTKDKKRGTDLVMALWFMLLHAPKLAAPKLPPKLWRPSFLTGVSV*
Ga0075480_1060799713300008012AqueousTTSRNKLDENLGLEALIPPVVRSGSLRLPSMSGNWKTLALVDELVTWTKDKKRGTDLAMALWFMLLHAPKLTTPKLPPRMWRPSFMLDE*
Ga0129348_117088423300010296Freshwater To Marine Saline GradientCVTIVPHTTSRNKLDENLGLEALIPPVVRSGSLRLPSMSGNWKTLALVDELVTWTRDKKRGTDLAMALWFMLLHAPKLTTPKLPPRMWRPSFMLDG*
Ga0129351_134940413300010300Freshwater To Marine Saline GradientAQRFLLAHDFVRRWQALTGVTIVPHTTSRNKLDENLGLEALIPPVVRSGSLRLPSMSGNWKTLALVDELVTWTRDKKRGTDLAMALWFMLLHAPKLTTPKLPPRMWRPSFMLDR*
Ga0129351_136510723300010300Freshwater To Marine Saline GradientFLLAHDFVRRWQALTGVTIVPHTTSRNKLDENLGLEALIPPVVRSGSLRLPSMSGNWKTLALVDELVTWTRDKKRGTDLAMALWFMLLHAPKLTTPKLPPRMWRPSFMLDA*
Ga0136656_105956613300010318Freshwater To Marine Saline GradientRNKLDENLGWEALIPPVGRSGSLRLPSMSGNWKTLALVDELVTWTRDKKRGTDLAMALWFMLLHAPKLTTPKLPPRMWRPSFMLDG*
Ga0129333_1035115223300010354Freshwater To Marine Saline GradientEALIPPVVRHGSVRFPTMRGQWKTLAMVDELTTWTRDKKRGTDMVMAMWFMLLHAPKLTEGKPPPRLWRPSWLVNR*
Ga0129333_1067096533300010354Freshwater To Marine Saline GradientRWQALTGVTIVPHTTSRNKLDENLGLEALIPPVVRSGSLRLPSMSGNWKTLALVDELVTWTKDKKRGTDLAMALWFMLLHAPKLTTPKLPPRMWRPSFMLDE*
Ga0129336_1047349713300010370Freshwater To Marine Saline GradientAQRFLLAHDFVRRWQATRQVTIVPHTTARNKIDENLGVEALIPPVVRTGSLRLPTLTANWKTLALVDELTTWTRDKKKGTDLTMALWFMLLHAPKLTDPKLPPRMWRPSFLAG*
Ga0153801_108614413300012017FreshwaterIIPHTTSRNKLDENLGLEALIPPIVRSGSLRLPTLSGNWKTLALIEELCSWTKDKKKGTDLAMSLWFTLLHAPRLSAPRLPAQRWRPSWL*
(restricted) Ga0172367_1056343813300013126FreshwaterKLGVEALIPPVVRHGSVRFPTMRGQWKTLAMVDELTTWTRDKKRGTDMVMAMWFMLLHAPKLTEAKAPPRLWRPSWMLQR*
Ga0182096_115305243300016740Salt MarshDQNLGLEALIPPVVRSGSLRLPTLSGNWKTLALVDELVTWTRDKKKGTDLAMALWFMLLNAPKFMQAKPPPRLWRPSFLLDG
Ga0181364_103222213300017701Freshwater LakeGVLVVPHTTSKNKLDETLGVEALIPTVVRSGSVRLPTMRGNWKTLALVDEMTTWTRDKTRGTDMVMAMWFMLLHAPKLTKPILPPRQWRPSWMLEK
Ga0181584_1078399513300017949Salt MarshIVPHTTSRNKLDENLGLEALIPPVVRSGSLRLPSMSGNWKTLALVDELVTWTRDKKRGTDLAMALWFMLLHAPKLTTPKLPPRMWRPSFMLDG
Ga0181607_1062096623300017950Salt MarshAHDFVRRWQALRGVQIVPHTTARNKIDQNLGLEALIPPVVRSGSLRLPTLSGNWKTLALVDELVTWTRDKKKGTDLAMALWFMLLNAPKFTQAKPPPRLWRPSFLLDG
Ga0181577_1073644623300017951Salt MarshYPVSHIIVEINAAQRFLLAHDFVRRWQALRQVMVIPHTTSRNKLDENFGLEALIPPVVRSGSLRLPRMSENWKTLALVQELETWARDKKKGTDLAMALWFMLLHAPKLTQPKMPPRMWRPSFLVNA
Ga0181583_1017320533300017952Salt MarshAHDFVRRWQALTGVTIVPHTTSRNKLDENLGLEALIPPVVRSGSLRLPSMSGNWKTLALVDELVTWTRDKKRGTDLAMALWFMLLRAPKLTTPKLPPRMWRPSFMLDA
Ga0181582_1043166113300017958Salt MarshDENLGLEALIPPVVRSGSLRLPSMSGNWKTLALVDELVTWTKDKKRGTDPAMALWFMLLHAPKLTTPKLPPRMWRPSFMLDG
Ga0181590_1053501713300017967Salt MarshTSRNKVDENLGLEALIPPVVRSGSLRLPSMSGNWKTLALVDELVTWTKDKKRGTDLAMALWFMLLHAPKLTTPKLPPRMWRPSFMLDG
Ga0181590_1105497713300017967Salt MarshFLLAHDFVRRWQALTGVTIVPHTTSRNKLDENLGLEALIPPVVRSGSLRLPSMSGNWKTLALVDELVTWTRDKKRGTDLAMALWFMLLHAPKLTTPKLPPRMWRPSFMLDG
Ga0180436_1122577413300017990Hypersaline Lake SedimentRFLLAHDFVRRWQALRGVQIVPHTTARNKIDQNLGLEALIPPVVRSGSLRLPTLSGNWKTLALVDELVTWTRDKKKGTDLAMALWFMLLNAPKFTQAKPPPRLWRPSFMLNE
Ga0180436_1156619313300017990Hypersaline Lake SedimentAQRFLLAHDFVRRWQALTGVTIVPHTTSRNKLDENLGLEALIPPVVRSGSLRLPSMSGNWKTLALVDELVTWTRDKKRGTDLAMALWFMLLHAPKLTTPKLPPRMWRPSFMLDG
Ga0180435_1126481013300017992Hypersaline Lake SedimentALIPPVVRSGSLRLPSMSGNWKTLALVDELVTWTRDKKRGTDLAMALWFMLLHAPKLTTPKLPPRMWRPSFMLDG
Ga0180435_1168488623300017992Hypersaline Lake SedimentLAHDFVRRWQALTGVTIVPHTTSRNKLDENLGLEALIPPVVRSGSLRLPSMSGNWKTLALVDEMVTWTSDKKRGTDLAMALWFMLLHAPKLTTPKLPPRMWRPSFMLDG
Ga0180435_1172711223300017992Hypersaline Lake SedimentLAHDFVRRWQALTGVTIVPHTTSRNKLDENLGLEALIPPVVRSGSLRLPSMSGNWKTLALVDEMVTWTRDKKRGTDLAMALWFMLLHAPKLTTPKLPPRMWRPSFMLDA
Ga0180433_1103333013300018080Hypersaline Lake SedimentKIDENLGVEALIPPVVRTGSLRLPTLTANWKTLALIDELTTWTRDKRKGTDLTMALWFMLLHAPKLTEPKVPPRMWRPSFLAG
Ga0181592_1017425043300018421Salt MarshNAAQRFLLAHDFVRRWQALTGVTIVPHTTSRNKLDENLGLEALIPPVVRSGSLRLPSMSGNWKTLALVDELVTWTRDKKRGTDLAMALWFMLLHAPKLTTPKLPPRMWRPSFMLDG
Ga0181593_1021688413300018423Salt MarshDFVRRWQALTGVTIVPHTTSRNKLDENLGLEALIPPVVRSGSLRLPSMSGNWKTLALVDELVTWTRDKKRGTDLAMALWFMLLHAPKLTTPKLPPRMWRPSFMLDG
Ga0181591_1060417423300018424Salt MarshNAAQRFLLAHDFVRRWQALTGVTIVPHTTSRNKLDENLGLEALIPPVVRSGSLRLPSMSGNWKTLALVDELVTWTKDKKRGTDLAMALWFMLLHAPKLTTPKLPPRMWRPSFMLDG
Ga0181591_1079195123300018424Salt MarshRFLLAHDFVRRWQALTGVTIVPHTTSRNKLDENLGLEALIPPVVRSGSLRLPSMSGNWKTLALVDELVTWTRDKKRGTDLAMALWFMLLHAPKLTTPKLPPRMWRPSFMLDG
Ga0194014_107436713300019732SedimentQNLGLEALIPPVVRSGSLRLPTMSGNWKTLALVQDLETWTRDKKKGTDLAMALWFMLLHAPKLTQPKLPPRMWRPSFLNDD
Ga0194023_106317213300019756FreshwaterPHTTARNKIDQNLGLEALIPPVVRSGSLRLPTLSGNWKTLALVDELVTWTRDKKKGTDLAMALWFMLLNAPKFTQSKPPPRLWRPSFLLDG
Ga0194023_113552013300019756FreshwaterNLGIEALIPNVVRSGSLRLPSMSNNWKTLALVQEMESWTKDKKRGTDLVMALWFMLLHAPKLAAPKLPPRLWRPSFLVDV
Ga0194024_115349213300019765FreshwaterRFLLAHDFVRRWQATRQVTIVPHTTARNKIDENLGVEALIPPVVRTGSLRLPTLTANWKTLALVDELTTWTRDKKKGTDLTMALWFMLLHAPKLTDPKLPPRMWRPSFLAG
Ga0181359_125912623300019784Freshwater LakeHDFVRKWTALWGVNILPHTTSRNKLDQNLGIEAIIPTLVRSGSLRLPTMRGNWKTLALVDELCKWTRDKKNGTDLAMALWFACLHAPNLTTIKRPPRQWRPSWI
Ga0222716_1010263913300021959Estuarine WaterYPVSHIVVEINAAQRFLLAHDFVRRWQALRQVLIIPHTTSRNKLDENFGLEALIPSVVRSGSLRLPSMSNNWKTLALVQELETWTRDKKKGTDLAMALWFMLLHAPKLTEPKRPPRMWRPSFLVSS
Ga0222715_1000427113300021960Estuarine WaterRNKLDENFGLEALIPSVVRSGSLRLPSMSNNWKTLALVQELETWTRDKKKGTDLAMALWFMLLHAPKLTEPKRPPRMWRPSFLVDA
Ga0222714_1015619813300021961Estuarine WaterWQALRGVQIVPHTTARNKIDQNLGLEALIPPVVRSGSLRLPTLSGNWKTLALVDELVTWTRDKKKGTDLAMALWFMLLNAPKFTQAKPPPRLWRPSFMLDE
Ga0222719_1002217613300021964Estuarine WaterRWQALRQVLVIPHTTSRNKLDENFGLEALIPPVVRSGSLRLPRMSENWKTLALVQELETWTRDKKKGTDLAMALWFMLLHAPKLTEPKRPPRMWRPSFLVDA
Ga0212025_105211323300022057AqueousLIPPVVRSGSLRLPSMSGNWKTLALVDELVTWTRDKKRGTDLAMALWFMLLHAPKLTTPKLPPRMWRPSFMLDG
Ga0212031_104165213300022176AqueousRNKIDENLGVEALIPPVVRTGSLRLPTLTANWKTLALVDELTTWTRDKKKGTDLTMALWFMLLHAPKLTDPKLPPRMWRPSFLAG
Ga0196901_112811623300022200AqueousALRGVMVIPHTTSKNKLDQNLGLEALIPPVVRSGSLRLPTMSGNWKTLALVQELETWTRDKKKGTDLAMALWFMLLHAPKLTQPKLPPRMWRPSFLARD
Ga0196901_124179723300022200AqueousVPHTTARNKIDENLGVEALIPPVVRTGSLRLPTLTANWKTLALVDELTTWTRDKKKGTDLTMALWFMLLHAPKLTDPKLPPRMWRPSFLAG
Ga0255152_103568013300024503FreshwaterNKIDENLGVEALIPPVVRTGSVRLPTMTGSWKTLALVDELITWTRDKKKGTDLTMALWFMLLHAPKLTDPKLPPRMWRPSWV
Ga0208424_100142453300025445AqueousKLDENLGLEALIPPVVRSGSLRLPTLTANWKTLALIEELCSWTKDKRKGTDLAMALWFTLLHAPKLSEPKLPPQMWRPSWLSA
Ga0208161_110855133300025646AqueousSRNKLDENLGLEALIPPVVRSGSLRLPSMSGNWKTLALVDELVTWTRDKKRGTDLAMALWFMLLHAPKLTTPKLPPRMWRPSFMLDG
Ga0208160_110735933300025647AqueousENLGVEALIPPVVRTGSLRLPTLTANWKTLALVDELTTWTRDKKKGTDLTMALWFMLLHAPKLTDPKLPPRMWRPSFLAG
Ga0208428_105836023300025653AqueousATRQVTIVPHTTARNKIDENLGVEALIPPVVRTGSLRLPTLTANWKTLALVDELTTWTRDKKKGTDLTMALWFMLLHAPKLTDPKLPPRMWRPSFLAG
Ga0208898_107648643300025671AqueousNLGLEALIPPVVRSGSLRLPTMSGNWKTLALVQELETWTRDKKKGTDLAMALWFMLLHAPKLTQPKLPPRMWRPSFLTAD
Ga0208019_111724113300025687AqueousVRRWQALTGVTIVPHTTSRNKLDENLGLEALIPPVVRSGSLRLPSMSGNWKTLALVDELVTWTRDKKRGTDLAMALWFMLLHAPKLTTPKLPPRMWRPSFMLDG
Ga0208150_113862813300025751AqueousAHDFVRRWQALRGVQIVPHTTARNKIDQNLGLEALIPPVVRSGSLRLPTLSGNWKTLALVDELVTWTRDKKKGTDLAMALWFMLLNAPKFTQSKPPPRLWRPSFLLDG
Ga0208899_104647313300025759AqueousNKLDENLGLEALIPPVVRSGSLRLPSMSGNWKTLALVDELVTWTRDKKRGTDLAMALWFMLLHAPKLTTPKLPPRMWRPSFMLDG
Ga0208899_109909013300025759AqueousDFVRRWQALRQVLIIPHTTSRNKLDENFGLEALIPPVVRSGSLRLPRMSENWKTLALVQELETWTRDKKKGTDLAMALWFMLLHAPKLTEPKRPPRMWRPSFLVDA
Ga0208899_113689913300025759AqueousHDFVRRWQALTGVTIVPHTTSRNKLDENLGLEALIPPVVRSGSLRLPSMSGNWKTLALVDELVTWTRDKKRGTDLAMALWFMLLHAPKLTTPKLPPRMWRPSFMLDA
Ga0208427_104393133300025771AqueousTTARNKIDENLGVEALIPPVVRTGSLRLPTMTANWKTLALVEELTTWTKDKKKGTDLTMALWFMLLHAPKLTDPKLPPRMWRPSFLAG
Ga0208427_126841413300025771AqueousQRFLLAHDFVRRWQALTGVTIVPHTTSRNKLDENLGLEALIPPVVRSGSLRLPSMSGNWKTLALVDELVTWTRDKKRGTDLAMALWFMLLHAPKLTTPKLPPRMWRPSFMLDG
Ga0208785_115078813300025815AqueousRRWQALTGVTIVPHTTSRNKLDENLGLEALIPPVVRSGSLRLPSMSGNWKTLALVDELVTWTRDKKRGTDLAMALWFMLLHAPKLTTPKLPPRMWRPSFMLDG
Ga0208542_111605033300025818AqueousENLGLEALIPPVVRSGSLRLPSMSGNWKTLALVDELVTWTRDKKRGTDLAMALWFMLLHAPKLTTPKLPPRMWRPSFMLDG
Ga0208547_107014513300025828AqueousVNAAQRFLLAHDFVRRWQATRQVTIVPHTTARNKIDENLGVEALIPPVVRTGSLRLPTMTANWKTLALVEELTTWTKDKKKGTDLTMALWFMLLHAPKLTDPKLPPRMWRPSFLAG
Ga0208917_111173033300025840AqueousDFVRRWQATRQVTIVPHTTARNKIDENLGVEALIPPVVRTGSLRLPTMTANWKTLALVEELTTWTKDKKKGTDLTMALWFMLLHAPKLTDPKLPPRMWRPSFLAG
Ga0208644_119134513300025889AqueousAQRFLLQHDFVRKWTAKWGVNILPHTTARNKLDQNLGIEAIIPTLVRSGSLRLPTMRGNWKTLALVDELCKWTRDKKNGTDLAMALWFACLHAPNLTTIKRPPRQWRPSWI
Ga0209354_1017106633300027808Freshwater LakeRGVSIVPHTTTRNKLDENLGLEALIPPVVRSGSLRLPTMAGNWKTLALVEELCSWTKDKKKGTDLAMAFWFTLLHAPRLSSPRLPAQRWRPSWL
Ga0209536_10038026823300027917Marine SedimentHDFVRRWQATRQVTIVPHTTARNKIDENLGVEALIPPVVRTGSLRLPTLTANWKTLALVDELTTWTRDKKKGTDLTMALWFMLLHAPKLTDPKLPPRMWRPSFLAG
Ga0119945_101133923300029933AquaticTTSRNKLDENLGVEALIPTIVRSGSLRLPTMTANWKTLALVDELTTWTKDKRKGTDLVMALWFMLLHAPKLTTPKLPPRQWRPTFLAG
Ga0307380_1066311033300031539SoilTSRNKLDENFGLEALIPPVVRSGSLRLPRMSENWKTLALVQELETWTRDKKKGTDLAMALWFMLLHAPKLTEPKRPPRMWRPSFLIDA
Ga0315904_1139561313300031951FreshwaterDFVRRWQSINRVQIVPHTTSSNKLDEKLGVEALIPTVVRHGSVRFPTMRGQWKTLAMVDELTTWTRDKKRGTDMVMAMWFMLLHAPKLTQSKPPPRLWRPSWLLAK
Ga0315906_1047506813300032050FreshwaterQTHRNKIDENLGVEALIPPAVRSGSVRLPTLTANWKTLALIDELTTWTKDKKRGTDLTMSLWFMLLHSPKLAEPKLPPRMWRPSFLAG
Ga0316617_10152686023300033557SoilPHTTSRNKLDQNLGIEALIPPIVRSGSLRLPTMRGNWQTLALVDELTKWQRDKKSGTDLAMALWFATLHAQNLSGVKQPPRLWRPSWL
Ga0310130_0034412_1_2853300034073Fracking WaterVQIVPHTTSRNKIDENLGVEALIPPVVRTGSLRLPTLTANWKTLALVDELTTWTKDKKKGTDLTMALWFMLLHAPKLTDPKLPPRMWRPSFLAG
Ga0335010_0248620_690_10493300034092FreshwaterHIIVEINAAQRFLLQHDFVRKWTALWGVNILPHTTARNKLDQNLGIEAIIPTLARSGALRLPTMRGNWKTLALVDELCKWTRDKKNGTDLAMALWFACLHAPNLTTIKRPPRQWRPSWI
Ga0335066_0564518_227_5923300034112FreshwaterVSHIIVEINAAQRFLLQHDYVRKWTAKWGVNILPHTTARNKLDQNLGIEAIIPTLARSGALRLPTMRGNWKTLALVDELCKWTRDKKNGTDLAMALWFACLHAPNLTTIKRPPRQWRPSW
Ga0335053_0677558_298_5823300034118FreshwaterWGVNILPHTTSRNKLDQNLGIEAIIPTLARSGALRLPTMRGNWKTLALVDELCKWTRDKKNGTDLAMALWFACLHAPNLTTIKRPPRQWRPSWI
Ga0348336_020068_3145_34953300034375AqueousVNAAQRFLLAHDFVRRWQATRQVTIVPHTTARNKIDENLGVEALIPPVVRTGSLRLPTLTANWKTLALVDELTTWTRDKKKGTDLTMALWFMLLHAPKLTDPKLPPRMWRPSFLAG


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.