NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F085663

Metagenome / Metatranscriptome Family F085663

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F085663
Family Type Metagenome / Metatranscriptome
Number of Sequences 111
Average Sequence Length 59 residues
Representative Sequence MPRESSSGSERLRIWLERGESGYWLRDAATGEAMRWDDARVRVVKLAGASYRADALQDD
Number of Associated Samples 102
Number of Associated Scaffolds 111

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 66.67 %
% of genes near scaffold ends (potentially truncated) 97.30 %
% of genes from short scaffolds (< 2000 bps) 97.30 %
Associated GOLD sequencing projects 95
AlphaFold2 3D model prediction Yes
3D model pTM-score0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (61.261 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere
(9.910 % of family members)
Environment Ontology (ENVO) Unclassified
(22.523 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(46.847 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 4.60%    β-sheet: 13.79%    Coil/Unstructured: 81.61%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.47
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 111 Family Scaffolds
PF02780Transketolase_C 86.49
PF00676E1_dh 4.50
PF02353CMAS 0.90
PF00364Biotin_lipoyl 0.90
PF03069FmdA_AmdA 0.90

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 111 Family Scaffolds
COG05672-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymesEnergy production and conversion [C] 4.50
COG1071TPP-dependent pyruvate or acetoin dehydrogenase subunit alphaEnergy production and conversion [C] 4.50
COG2226Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenGCoenzyme transport and metabolism [H] 0.90
COG22272-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylaseCoenzyme transport and metabolism [H] 0.90
COG2230Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferasesLipid transport and metabolism [I] 0.90
COG2421Acetamidase/formamidaseEnergy production and conversion [C] 0.90

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A61.26 %
All OrganismsrootAll Organisms38.74 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908038|B3_all_c_ConsensusfromContig82618Not Available874Open in IMG/M
2140918008|ConsensusfromContig253747Not Available1005Open in IMG/M
2170459009|GA8DASG02GK9AJNot Available502Open in IMG/M
3300005093|Ga0062594_101217731All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria748Open in IMG/M
3300005174|Ga0066680_10846308Not Available547Open in IMG/M
3300005177|Ga0066690_10526841Not Available793Open in IMG/M
3300005179|Ga0066684_10875296Not Available588Open in IMG/M
3300005336|Ga0070680_100605417Not Available940Open in IMG/M
3300005344|Ga0070661_100486051Not Available987Open in IMG/M
3300005435|Ga0070714_100281047All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei1546Open in IMG/M
3300005435|Ga0070714_101321761All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria704Open in IMG/M
3300005436|Ga0070713_100429064Not Available1238Open in IMG/M
3300005439|Ga0070711_100185095All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei1596Open in IMG/M
3300005454|Ga0066687_10942216Not Available515Open in IMG/M
3300005458|Ga0070681_10607113Not Available1008Open in IMG/M
3300005467|Ga0070706_101272850Not Available675Open in IMG/M
3300005467|Ga0070706_101935663All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300005467|Ga0070706_102093784All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300005542|Ga0070732_10223528Not Available1126Open in IMG/M
3300005561|Ga0066699_10594586Not Available795Open in IMG/M
3300005576|Ga0066708_10293181Not Available1041Open in IMG/M
3300005616|Ga0068852_100850981Not Available928Open in IMG/M
3300005893|Ga0075278_1003101All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei1966Open in IMG/M
3300005898|Ga0075276_10003061All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales3730Open in IMG/M
3300005905|Ga0075269_10078315Not Available606Open in IMG/M
3300006046|Ga0066652_100623967Not Available1019Open in IMG/M
3300006581|Ga0074048_12667621All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria653Open in IMG/M
3300006881|Ga0068865_101145113Not Available687Open in IMG/M
3300006903|Ga0075426_10972581All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria641Open in IMG/M
3300006904|Ga0075424_100401618All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei1461Open in IMG/M
3300009094|Ga0111539_11497714Not Available782Open in IMG/M
3300009137|Ga0066709_101997256Not Available804Open in IMG/M
3300009177|Ga0105248_11776513All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium699Open in IMG/M
3300010037|Ga0126304_11219469All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria516Open in IMG/M
3300010320|Ga0134109_10140847Not Available863Open in IMG/M
3300010326|Ga0134065_10210714All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium708Open in IMG/M
3300010360|Ga0126372_11934165Not Available635Open in IMG/M
3300010362|Ga0126377_11269859Not Available808Open in IMG/M
3300010362|Ga0126377_11535121Not Available740Open in IMG/M
3300010373|Ga0134128_11144807Not Available859Open in IMG/M
3300010373|Ga0134128_13153879Not Available506Open in IMG/M
3300010396|Ga0134126_10396352All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei1604Open in IMG/M
3300010399|Ga0134127_12613836Not Available585Open in IMG/M
3300010866|Ga0126344_1287704Not Available1122Open in IMG/M
3300011991|Ga0120153_1068538Not Available612Open in IMG/M
3300011994|Ga0120157_1068680All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria731Open in IMG/M
3300012096|Ga0137389_11389827Not Available597Open in IMG/M
3300012200|Ga0137382_10359426All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1022Open in IMG/M
3300012204|Ga0137374_10808560All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria695Open in IMG/M
3300012205|Ga0137362_11190257Not Available646Open in IMG/M
3300012356|Ga0137371_10276744All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei1309Open in IMG/M
3300012359|Ga0137385_11179217Not Available627Open in IMG/M
3300012362|Ga0137361_10117665All Organisms → cellular organisms → Bacteria2337Open in IMG/M
3300012582|Ga0137358_10764801Not Available644Open in IMG/M
3300012924|Ga0137413_10502448Not Available892Open in IMG/M
3300012958|Ga0164299_11069473All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria600Open in IMG/M
3300012985|Ga0164308_10950003Not Available761Open in IMG/M
3300012988|Ga0164306_10845381Not Available741Open in IMG/M
3300013105|Ga0157369_10051126All Organisms → cellular organisms → Bacteria4473Open in IMG/M
3300013307|Ga0157372_10681459All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1196Open in IMG/M
3300013765|Ga0120172_1114630All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria650Open in IMG/M
3300014154|Ga0134075_10389807Not Available614Open in IMG/M
3300014166|Ga0134079_10617662Not Available541Open in IMG/M
3300014254|Ga0075312_1150391All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium516Open in IMG/M
3300014268|Ga0075309_1015444All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei1600Open in IMG/M
3300015089|Ga0167643_1030540Not Available835Open in IMG/M
3300016445|Ga0182038_11267373All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria658Open in IMG/M
3300017937|Ga0187809_10244873All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria647Open in IMG/M
3300018433|Ga0066667_11113777Not Available684Open in IMG/M
3300018433|Ga0066667_12081713Not Available524Open in IMG/M
3300018482|Ga0066669_11687033Not Available581Open in IMG/M
3300019362|Ga0173479_10374555All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria677Open in IMG/M
3300021363|Ga0193699_10384320Not Available583Open in IMG/M
3300021445|Ga0182009_10472373Not Available658Open in IMG/M
3300025625|Ga0208219_1140785All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 35-68-8529Open in IMG/M
3300025780|Ga0210100_1011984Not Available1031Open in IMG/M
3300025878|Ga0209584_10271415All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria651Open in IMG/M
3300025891|Ga0209585_10132246Not Available957Open in IMG/M
3300025891|Ga0209585_10317128Not Available627Open in IMG/M
3300025910|Ga0207684_11025343All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium689Open in IMG/M
3300025916|Ga0207663_10181831All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei1502Open in IMG/M
3300025916|Ga0207663_10833850Not Available735Open in IMG/M
3300025917|Ga0207660_11009188All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria679Open in IMG/M
3300025922|Ga0207646_11541168Not Available575Open in IMG/M
3300025928|Ga0207700_11454666Not Available609Open in IMG/M
3300025939|Ga0207665_10583795Not Available871Open in IMG/M
3300025949|Ga0207667_10407215All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1385Open in IMG/M
3300026028|Ga0208420_1025019All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria524Open in IMG/M
3300026318|Ga0209471_1089933All Organisms → cellular organisms → Bacteria1343Open in IMG/M
3300026320|Ga0209131_1173971Not Available1052Open in IMG/M
3300026330|Ga0209473_1115288Not Available1117Open in IMG/M
3300026530|Ga0209807_1158107Not Available855Open in IMG/M
3300027577|Ga0209874_1080334Not Available799Open in IMG/M
3300027748|Ga0209689_1211913Not Available837Open in IMG/M
3300027842|Ga0209580_10063031All Organisms → cellular organisms → Bacteria1748Open in IMG/M
3300028558|Ga0265326_10237474Not Available526Open in IMG/M
3300028577|Ga0265318_10169785Not Available799Open in IMG/M
3300028705|Ga0307276_10181355Not Available548Open in IMG/M
3300028784|Ga0307282_10620474Not Available524Open in IMG/M
3300028792|Ga0307504_10119698Not Available862Open in IMG/M
3300031241|Ga0265325_10157131Not Available1072Open in IMG/M
3300031249|Ga0265339_10066056All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei1938Open in IMG/M
3300031251|Ga0265327_10088955All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei1509Open in IMG/M
3300031548|Ga0307408_102060218All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria549Open in IMG/M
3300031711|Ga0265314_10617424Not Available556Open in IMG/M
3300031716|Ga0310813_11765954Not Available580Open in IMG/M
3300031912|Ga0306921_12645550All Organisms → cellular organisms → Bacteria → Terrabacteria group517Open in IMG/M
3300031938|Ga0308175_102813847Not Available543Open in IMG/M
3300031962|Ga0307479_10490190Not Available1213Open in IMG/M
3300031996|Ga0308176_11693873All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria674Open in IMG/M
3300031996|Ga0308176_12630890Not Available536Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil9.91%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere9.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil8.11%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.11%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere5.41%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil4.50%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.60%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.60%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil3.60%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.70%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost2.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.70%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands2.70%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil2.70%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.70%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.80%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil1.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.80%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.80%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.80%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.80%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.90%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.90%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.90%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.90%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.90%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.90%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand0.90%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.90%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.90%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.90%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.90%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.90%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908038Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3EnvironmentalOpen in IMG/M
2140918008Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_allEnvironmentalOpen in IMG/M
2170459009Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cmEnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005893Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_202EnvironmentalOpen in IMG/M
3300005898Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_405EnvironmentalOpen in IMG/M
3300005905Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_105EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006581Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010866Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011991Permafrost microbial communities from Nunavut, Canada - A34_65cm_12MEnvironmentalOpen in IMG/M
3300011994Permafrost microbial communities from Nunavut, Canada - A7_65cm_12MEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300013765Permafrost microbial communities from Nunavut, Canada - A30_80cm_6MEnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300014254Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D2EnvironmentalOpen in IMG/M
3300014268Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1EnvironmentalOpen in IMG/M
3300015089Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8A, Adjacent to main proglacial river, end of transect (Watson river))EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300017937Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300021363Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2EnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300025625Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025780Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300025878Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)EnvironmentalOpen in IMG/M
3300025891Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026028Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300026318Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)EnvironmentalOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026330Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)EnvironmentalOpen in IMG/M
3300026530Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)EnvironmentalOpen in IMG/M
3300027577Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027748Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028558Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaGHost-AssociatedOpen in IMG/M
3300028577Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaGHost-AssociatedOpen in IMG/M
3300028705Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300031241Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaGHost-AssociatedOpen in IMG/M
3300031249Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaGHost-AssociatedOpen in IMG/M
3300031251Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaGHost-AssociatedOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031711Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaGHost-AssociatedOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
B3_all_c_021565002124908038SoilMPERLRVWLERGESGYWLRDAATGEALRWNDGPLRVVKLAGSSYRGDALPDDGFAP
Bog_all_C_050142002140918008SoilMPAESSSHSSEGASPERLRVWLERGESGYWLRDAATGEALRWNDGPLRVVKLA
F47_069397202170459009Grass SoilVWLERGESGYWLRDAATGEALRWNDGPLRVVKLAGSSYRVDALQDDGFTPGRRLA
Ga0062594_10121773113300005093SoilVSGRLRLWLEPGESGYWLRDAATGDPVRWSDPRLLVLPVAGASYRLEALADPAFAPPAELALVSEPE
Ga0066680_1084630813300005174SoilMPAESSSSSDRLRLWLERGESGYWLRDAATGAALKWDDPRLRVVKLAGSSYRLDA
Ga0066690_1052684123300005177SoilMPAGDSSSSERLRIWLERGESGYWLRDAESGDAMKWDDPRVRVVKLAGASYRA
Ga0066684_1087529613300005179SoilMPPESSSSSDRLRIWLEPGESGYWLRDAASGDAIKWDDERLRVVKVAGSSYRLDELQDDAFAPGR
Ga0070680_10060541713300005336Corn RhizosphereVPSGSSSSSESRLRIWLERGESGYRLRDAETGDAMKWDDPRVRVIKVAGASYRGDALQDDAFA
Ga0070661_10048605113300005344Corn RhizosphereVPPGSSSSSEAGRLRIWLERGESGYWLRDAATGDAMKWDDPRVRVVKLAGASYR
Ga0070714_10028104713300005435Agricultural SoilVPADASSNSEPRLRIWLERGESGYWLRDAATGDAMKWDDPRVRVVKLAGA
Ga0070714_10132176113300005435Agricultural SoilMPSDGSSSSDRLRLWLERGESGFWLRDAATGQAVRWDDDRLRVVRLAGSSYRLDELQDDAFAPG
Ga0070713_10042906413300005436Corn, Switchgrass And Miscanthus RhizosphereVPADASSNSEPRLRIWLERGESGYWLRDAATGDAMKWDDPRVRVVKLAGAS
Ga0070711_10018509533300005439Corn, Switchgrass And Miscanthus RhizosphereVPADASSNSEPRLRIWLERGESGYWLRDAATGDAMKWDDPRVRVVKLAGASYR
Ga0066687_1094221623300005454SoilVSQRPSGAFLSSERLRIWLEPGESGYWLRNAATGEALSHRDPRILVVKVAGASY
Ga0070681_1060711323300005458Corn RhizosphereVRIWLERGESGYWLRDAETGDAMKWDDPRVRVIKVAGASYRGDALQDDAF
Ga0070706_10127285013300005467Corn, Switchgrass And Miscanthus RhizosphereMPRESSSGSERLRIWLERGESGYWLRDAATGEAMRWDDARVRVVKLAGASYRADALQDD
Ga0070706_10193566323300005467Corn, Switchgrass And Miscanthus RhizosphereMSAERPSSSERLRLWLERGESGYWLRDAVTGEAVRWDDDRLRVVKLAGSSYRLEELQGDAFAPGKRLAL
Ga0070706_10209378423300005467Corn, Switchgrass And Miscanthus RhizosphereMPADGSSNSERLRVWLERGESGYWLRDAASGEAVSWSDPRLLVMKLAGVSYRGDALQDDAFAPG
Ga0070732_1022352813300005542Surface SoilMQSEDSSSSERLRIWLERGESGFWLRNAATGEAMSFRDPRLLVVKVAGVSHRSDALQDDAFSPGR
Ga0066699_1059458623300005561SoilMPSGSSSPSERLRLWLERGESGYWLRDASTGDAVSWSDPRVRVIKVAGTSYRADALQDDAFAP
Ga0066708_1029318123300005576SoilMPSESSSSSERLRLWLEPGPSGYWLRDAATGDAVRWDDERLRVVKLAGASYRAEALQD
Ga0068852_10085098113300005616Corn RhizosphereVPPGSSSSSEAGRLRIWLERGESGYWLRDAATGDAMKWDDPRVRVVKLAGASYRADALQD
Ga0075278_100310113300005893Rice Paddy SoilMPSGSSSPSERLRLWLERGESGYWLRDAATGDAIRWDDERLRVVKLAGASYRSDALQDDAFAPGKR
Ga0075276_1000306153300005898Rice Paddy SoilVADRLRLWLERGASGFWLRDAAGGEAVRWDDPRLRVVRLAGASYRLDALQDD
Ga0075269_1007831513300005905Rice Paddy SoilMPPEGSSSSERLRIWLERGESGYRLRDAATGDAMKWDDPRVRVVKLAGASYRED
Ga0066652_10062396713300006046SoilMPAGSSSSSDAPGRLRLWLERGESGYWLRDAATGDAVRWDDERLRVVKL
Ga0074048_1266762113300006581SoilVPPGSSSSSEPRLRIWLERGQSGYWLRDAATGDAMKWDDPRVRVVKLAGSSY
Ga0068865_10114511313300006881Miscanthus RhizosphereVSGRLRLWLEPGESGYWLRDAATGDPVRWSDPRLLVLPVAGASYRLEALADPAFAPPAELALVSEPENE
Ga0075426_1097258113300006903Populus RhizosphereVSGSRLRIWLERGELEGGRGYWLRDAATGAAVRWDDERLRVVKLAGASYRLEELQHDAFAPGRRLSLVREPEN
Ga0075424_10040161833300006904Populus RhizosphereVLSGDSSSSEPRLRIWLERGESGYWLRDAATGDPMKWDDPRVRVVKLAGASYRADALQNDGF
Ga0111539_1149771423300009094Populus RhizosphereLPPERLRLWLERGESGYWLRDAATGDPMKWDDPRVRVVKLAGASYRADALQNDGFA
Ga0066709_10199725613300009137Grasslands SoilLERGDSGYWLRDAATGEAMHWNDDRVRVVKLAGASYRADALQDDAFA
Ga0105248_1177651323300009177Switchgrass RhizosphereLERGESGYWLRDAESNEPVRWNDQRLRVVAVAGASYRADALADEAFA
Ga0126304_1121946923300010037Serpentine SoilVSDRLRLWLERGKSGYWLRDAASGEPVRWTDDRLLIVPLAGASYRLEALADEGFAPPVPLALVPEADN
Ga0134109_1014084713300010320Grasslands SoilMPAGSSSSSDAPGRLRLWLERGESGYWLRDAATGDAVRWNDERLRVIKLAGSSYRLDALQ
Ga0134065_1021071423300010326Grasslands SoilVPPEEARRLRIWLERGESGYWLRDAATGEAMRWNDGRVRVVRLAGSSYRADALQDDAF
Ga0126372_1193416523300010360Tropical Forest SoilMPSGGSSPSDGSGRLRLWLERGESGYWLRDAATGDAMKWDDPRVRVVKLAGASYRSDAL
Ga0126377_1126985913300010362Tropical Forest SoilMPPESSSASDRLRIWLERGDSGYWLRDAATGDAMKWDDARVRVVKLAGASYRAEAL
Ga0126377_1153512123300010362Tropical Forest SoilVPAGASSSSERLRIWLERGESGYWLRDAATGDAMKWDDPRIRVVKLAGSSYRADALQDDAFA
Ga0134128_1114480723300010373Terrestrial SoilMPPESSSNTERLRIWLERGESGYRLSDAATGDAMRWSDPRVRVVKLAGASYRLEALQDDAFAP
Ga0134128_1315387913300010373Terrestrial SoilMPRESSSGSERLRIWLERGESGYWLRDAATGEAMRWDDARVRVVKLAGASYRADALQDDAFAPGRRL
Ga0134126_1039635233300010396Terrestrial SoilMPPEGSSNTERLRIWLERGESGYWLRDAATGEAMRWNDPRVRVVKLAGASYRLDALQDDA
Ga0134127_1261383623300010399Terrestrial SoilVSERLRLWLERGESGYWLRDAASGEPVRWSDERLLIVPLAGASYRLEALADEAFAPPAPL
Ga0126344_128770413300010866Boreal Forest SoilMQSGDSSISEPERLRIWLEPGESGFWLRNAATGEAMSFRDPRLLVVKVAGVSHRSDAIQDDA
Ga0120153_106853813300011991PermafrostLWLERGASGYWLRDAQTGDAVRWDDERLRVVKLAGASYRMEALQD
Ga0120157_106868013300011994PermafrostVWLERGESGYRLRDAATGEALRWENGPLRVVKLAGSSYRSEALQDDGFAPGRRLAL
Ga0137389_1138982713300012096Vadose Zone SoilMPAESSSSSDRLRLWLERGESGYWLRDAATGAALKWDDPRLRVVKLAGASYRLEALQDDSFAPGQR
Ga0137382_1035942623300012200Vadose Zone SoilMPPESSSRSDRLRIWLERGESGYWLRDAESGVALKWDDERLRVVKVAGSSYRLDELQDDAFAPGQRLVLVREPE
Ga0137374_1080856013300012204Vadose Zone SoilMPAGSSSSSDAPGRLRLWLERGESGYWLRDADTGEAVRWNDERLRVVKLAGSSYRLDALQDDG
Ga0137362_1119025723300012205Vadose Zone SoilMPSESSSSSDRLRIWLERGASGFWLRDAATGDALKWDDPRLRVVKLAGASYRLEALQDDSFAP
Ga0137371_1027674433300012356Vadose Zone SoilMPPESSSRSDRLRIWLERGESGYWLRDAASGDALKWDDERLRVVKVAGSSYRLDELQDDAFAPGRRLVLVQEPEN
Ga0137385_1117921723300012359Vadose Zone SoilMPPESSSGSERLRIWLERGESGYWLRDAATGEAMRWNDGRVRVVKLAGSS
Ga0137361_1011766513300012362Vadose Zone SoilMQSSDSSNSERLRIWLERGESGYWLRNAATGEPLSFRDPRLLVVKVAGVSHRSDALQDDAFAPGRRLA
Ga0137358_1076480123300012582Vadose Zone SoilMQSSDSSNSERLRIWLERGESGYWLCNAATGEPLSFRDPRLLVVKVAGVSHRSDALQDDAFAPG
Ga0137413_1050244823300012924Vadose Zone SoilMPSESSSSSDRLRIWLERGASGFWLRDAATGDALKWDDPRLRVVKLAGASYRLDELQDDAFAPGRRLAL
Ga0164299_1106947323300012958SoilLEPGESGFWLRDAATGDAMKWDDPRVRVVKLAGASYRGDALQDDAFAPGRWLALVREP
Ga0164308_1095000323300012985SoilMPPESSSRSDRLRIWLERGESGFWLRDAATGDAMKWDDHRVRVVKL
Ga0164306_1084538123300012988SoilMPSGSSSRSDRLRIWLEPGPSGYWLRDAASGDALRWDDERLRVVKLAGSSYRIDELQDDAFAP
Ga0157369_1005112643300013105Corn RhizosphereMPHESSSNTERLRIWLEPGESGYWLRDAATGHAMRWDDPRVRVVKLAGVSYRLEA
Ga0157372_1068145933300013307Corn RhizosphereMPPESSSNTERLRIWLERGEAGYRLRDAATGDAMRWSDPRVRVVKLAGASYRLDALQDDAFAPGARLALVREPENE
Ga0120172_111463023300013765PermafrostMPPESSSRSDRLRIWLERGESGYWLRDAESGDALKWDDERLRVVKVAGSSYRLDELQ
Ga0134075_1038980723300014154Grasslands SoilMPAGDSSSSDRLRIWLERGDSGYWLRDAATGEAMRWNDDRVRVVKLAGASYRA
Ga0134079_1061766223300014166Grasslands SoilMPSGSSSRSDRLRIWLERGESGFWLRDAESGVALRWDDERLRVVKVAGSSYRLDELQEDV
Ga0075312_115039113300014254Natural And Restored WetlandsMSERLRLWLEQGESGYWLRDAATNEAVRWNDERLLVVALAGASYRAEALADDAFAPG
Ga0075309_101544433300014268Natural And Restored WetlandsMSERLRLWLEQGESGYWLRDAATNEAVRWNDERLLVVALAGASYRAEALADDAFAPGRR
Ga0167643_103054013300015089Glacier Forefield SoilMQSGDSSNSERLRIWLEPGESGFWLRNAATGEAMSFRDPRLLVVKVAGVSHRSEAIQDDAFAPGR
Ga0182038_1126737323300016445SoilVSPVPPGSSSSSERLRIWLERGESGYWLRDAASGDAVKWDDPRVRVVKLAGASYRADALQ
Ga0187809_1024487323300017937Freshwater SedimentMPPESSSSSEGERLRIWLERGESGYWLRDAASGDPIKWDDPRVRVVKLAGASYR
Ga0066667_1111377713300018433Grasslands SoilMPPESSSPSERLRIWLERGESGFRLRDAATGEAMKWDDPRIRVVKLAGASYRGDA
Ga0066667_1208171313300018433Grasslands SoilVPAGDSSSSEPRLRIWLEPGESGFWLRDAATGDVMKWDDPRVRVIKLAGASYRADALQDEAFAPGRRL
Ga0066669_1168703323300018482Grasslands SoilVQPVGSLSSERLRIWLEPGESGYWLRDAATGQALSYRDPRLLVVRVAGSSYRS
Ga0173479_1037455533300019362SoilMPPESSSSSNRLRIWLERGESGYWLRDAASGDAMKWDDPRVRVVKLAGASYRTGAL
Ga0193699_1038432023300021363SoilMPAEDSSSSETPGRLRVWLERGESGYWLRDAATGEALRWNDGPLRVVKLAGS
Ga0182009_1047237313300021445SoilMPPAGSSSSDHGARLRLWLERGESGYWLRDAATGEALRWSDPRVSVLKVAG
Ga0208219_114078513300025625Arctic Peat SoilMPSGSSSHSDRLRLWLERGASGYWLRDAETGDAVRWDDERLRVVKLAGEHRRADHRER
Ga0210100_101198413300025780Natural And Restored WetlandsMSERLRLWLERGESGYWLRDAATNEVVRWTDERLLVVPLAGASYRADALADDA
Ga0209584_1027141523300025878Arctic Peat SoilMPAESSSHSEEPERLRVWLERGESGYWLRDAATGEALRWNDGPLRVVKLAGSSYRS
Ga0209585_1013224613300025891Arctic Peat SoilMTPPDEAQDRLRVWLERGESGYWLRDAATGEALRWNDGPLRVVKLAGSSYRVDALQDDGFAPGRRL
Ga0209585_1031712823300025891Arctic Peat SoilMPAEDSSSSDRLRVWLEPGESGFWLRDAATGEALRWNDGPLRVVKLAGSSYR
Ga0207684_1102534313300025910Corn, Switchgrass And Miscanthus RhizosphereMSAERPSSSERLRLWLERGESGYWLRDAVTGEAVRWDDDRLRVVKLAGSSYRLEELQGDAFAPGKRLALVREPDNE
Ga0207663_1018183133300025916Corn, Switchgrass And Miscanthus RhizosphereVPADASSSSEPRLRIWLERGESGYWLRDAATGDAMKWDDPRVRVVKLAGASY
Ga0207663_1083385013300025916Corn, Switchgrass And Miscanthus RhizosphereMPSDASSRSERLRIWLERGESGYWLRDAATGRAISWRDPRLHVVNLAGSSYRLDALQD
Ga0207660_1100918823300025917Corn RhizosphereMPHESSSNTDRLRIWLERGESGYWLRDAATGYAMRWDDPRVRVVKLA
Ga0207646_1154116813300025922Corn, Switchgrass And Miscanthus RhizosphereMPAESSSPSERLRVWLERGESGYWLRDAATGAALKWDDPRLRVVKLAGSSYRLDALQDDA
Ga0207700_1145466613300025928Corn, Switchgrass And Miscanthus RhizosphereVPPGSSSSSDAGRLRIWLERGESGYWLRDAATGDAMKWEDPRIRVIKLAGASYRA
Ga0207665_1058379513300025939Corn, Switchgrass And Miscanthus RhizosphereVPADGSSSSDRLRIWLERGESGYWLRDAATGDAMKWDDPRVRVIKLAGASYRAAALQDDAFAPGR
Ga0207667_1040721513300025949Corn RhizosphereMRTTSERIRIWLERGESGYWLRDAATGEALRWDDDARGLRVVKLAGSSYRAEALQDDAFAPGRRLSLVREPE
Ga0208420_102501913300026028Natural And Restored WetlandsMSERLRLWLEQGESGYWLRDAATNEAVRWNDERLLVVALAGASYRAEALA
Ga0209471_108993333300026318SoilVSQRPSGAFLSSERLRIWLEPGESGYWLRNAATGEALSHRDPRILVVKVAGASYRSD
Ga0209131_117397113300026320Grasslands SoilMPSESSSSSDRLRIWLERGASGFWLRDAATGDALKWDDPRLRVVKLAGASYRLEALQDDS
Ga0209473_111528823300026330SoilVSQRPSGAFLSSERLRIWLEPGESGYWLRNAATGEALSHRDPRILVVKVAGASYRSDDLQDDAFDPG
Ga0209807_115810723300026530SoilVSQRPSGAFLSSERLRIWLEPGESGYWLRNAATGEALSHRDPRILVVKVAGASYRS
Ga0209874_108033423300027577Groundwater SandLPSDERVRLWLERGESGYWLRDAATEEAVRWSDERVHVVKVAGASYRADALQDEGFAPGS
Ga0209689_121191313300027748SoilMPAGSSSPSERLRLWLERGESGYWLRDASTGDAVSWSDPRLRVIKVAGTSYRADALQDDAFAPGRR
Ga0209580_1006303133300027842Surface SoilMQSEDSSSSERLRIWLERGESGFWLRNAATGEAMSFRDPRLLVVKVAGVSHRSDALS
Ga0265326_1023747423300028558RhizosphereMPAESSSHSDASSRLRVWLERGESGYWLRDAATGEALRWNDGPLRVVKL
Ga0265318_1016978523300028577RhizosphereMPSGSSSSSDRLRIWLERGASGYWLRDAATGDALKWDDERLRVVKLAGSSYRFDAL
Ga0307276_1018135513300028705SoilVPPGSSSSSEPRLRIWLEPGESGYWLRDAATGDAMKWDDPRVRVVKLAGASYRADALQDD
Ga0307282_1062047423300028784SoilMPPESSSGSERLRLWLERGESGFWLRDAATGDAVRWDDDRLRVVKLA
Ga0307504_1011969823300028792SoilMPSGSFSRSERLRLWLERGESGYWLRDAATGEAVRWDDERLRVVKLAGASYHLEALQDDAFAPGKRLAL
Ga0265325_1015713113300031241RhizosphereMPAESSSRSDELPERLRVWLERGESGYWLRDAATGEALRWNDGPLRVVKLAGSSY
Ga0265339_1006605633300031249RhizosphereMPAESSSRSDELPGRLRVWLERGESGYWLRDAATGEALRWNDGPLRVVKLAGSSYRSDALQDDGFAPGRRLALV
Ga0265327_1008895533300031251RhizosphereMPAESSSRSDELSGRLRVWLERGESGYWLRDAATGEALRWNDGPLRVVKLAGSSY
Ga0307408_10206021823300031548RhizosphereMTDRLRLWLERGESGYWLRDAASGEPVRWSDDRLLIVPLAGASYRLEALADEAFAPPA
Ga0265314_1061742413300031711RhizosphereMPAESSSRSDELPGRLRVWLERGESGYWLRDAATGEALRWNDGPLRVVKLAGSSY
Ga0310813_1176595423300031716SoilMPPEDFSSSDRLRIWLERGESGYWLRDAATGEAMRWDDPRVRVVKLAGASYRLEALQDDAFAPGRR
Ga0306921_1264555023300031912SoilMMAARLRLWLERGDSGYYLRDAESGEAIRWSDPRLHVVPVAGVSYRAEALPDSSFDPGKRLALVR
Ga0308175_10281384713300031938SoilVPQGDSSSSEPRLRIWLERGESGYWLRDAATGDAMKWDDPRVRVVKLAGASYRAEALQNEGFAPGR
Ga0307479_1049019013300031962Hardwood Forest SoilMQSGDSSSSERLRIWLERGESGYWLRNAATGEALSFRDPRLLVVKVAGVSHRSDALQDEAFAPGRRLA
Ga0308176_1169387313300031996SoilVPSGSSSSSESRLRIWLERGESGYWLRDAETGDAMKWDDPRVRVVKLAGASYRGGALQDEAFAPGR
Ga0308176_1263089023300031996SoilMPPESSSGSDRLRIWLERGESGFWLRDAATGDALRWDAPGLRVVKLAGASY

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.