NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F085668

Metagenome / Metatranscriptome Family F085668

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F085668
Family Type Metagenome / Metatranscriptome
Number of Sequences 111
Average Sequence Length 72 residues
Representative Sequence VRRLLLVGVVASAAVALYRRAQEIADEEDRPLADVVTDLPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVDA
Number of Associated Samples 100
Number of Associated Scaffolds 111

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 80.18 %
% of genes near scaffold ends (potentially truncated) 41.44 %
% of genes from short scaffolds (< 2000 bps) 80.18 %
Associated GOLD sequencing projects 89
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (74.775 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(17.117 % of family members)
Environment Ontology (ENVO) Unclassified
(38.739 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(48.649 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 78.38%    β-sheet: 0.00%    Coil/Unstructured: 21.62%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 111 Family Scaffolds
PF00166Cpn10 35.14
PF03054tRNA_Me_trans 19.82
PF06103DUF948 14.41
PF01411tRNA-synt_2c 14.41
PF07973tRNA_SAD 1.80
PF13480Acetyltransf_6 0.90
PF13442Cytochrome_CBB3 0.90
PF01266DAO 0.90
PF01478Peptidase_A24 0.90
PF13393tRNA-synt_His 0.90
PF02618YceG 0.90

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 111 Family Scaffolds
COG0234Co-chaperonin GroES (HSP10)Posttranslational modification, protein turnover, chaperones [O] 35.14
COG0482tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domainTranslation, ribosomal structure and biogenesis [J] 19.82
COG0013Alanyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 14.41
COG4768Uncharacterized conserved protein YoxC, contains an MCP-like domainFunction unknown [S] 14.41
COG1559Endolytic transglycosylase MltG, terminates peptidoglycan polymerizationCell wall/membrane/envelope biogenesis [M] 0.90

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms74.77 %
UnclassifiedrootN/A25.23 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002568|C688J35102_120803383Not Available1628Open in IMG/M
3300004006|Ga0055453_10039765All Organisms → cellular organisms → Bacteria1249Open in IMG/M
3300004479|Ga0062595_100056938All Organisms → cellular organisms → Bacteria1831Open in IMG/M
3300004479|Ga0062595_100303163All Organisms → cellular organisms → Bacteria1078Open in IMG/M
3300005163|Ga0066823_10048219All Organisms → cellular organisms → Bacteria762Open in IMG/M
3300005164|Ga0066815_10045855All Organisms → cellular organisms → Bacteria707Open in IMG/M
3300005169|Ga0066810_10001751All Organisms → cellular organisms → Bacteria2361Open in IMG/M
3300005329|Ga0070683_100862335All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium868Open in IMG/M
3300005335|Ga0070666_11350179All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria532Open in IMG/M
3300005336|Ga0070680_100259223All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1471Open in IMG/M
3300005339|Ga0070660_100418914All Organisms → cellular organisms → Bacteria1109Open in IMG/M
3300005355|Ga0070671_100138343All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2054Open in IMG/M
3300005365|Ga0070688_100023313All Organisms → cellular organisms → Bacteria3639Open in IMG/M
3300005439|Ga0070711_100463623All Organisms → cellular organisms → Bacteria1039Open in IMG/M
3300005455|Ga0070663_100096510All Organisms → cellular organisms → Bacteria2199Open in IMG/M
3300005457|Ga0070662_100660078All Organisms → cellular organisms → Bacteria883Open in IMG/M
3300005459|Ga0068867_100515039All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1031Open in IMG/M
3300005547|Ga0070693_100003036All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria7783Open in IMG/M
3300005614|Ga0068856_100685177All Organisms → cellular organisms → Bacteria1045Open in IMG/M
3300005614|Ga0068856_102000273Not Available590Open in IMG/M
3300005615|Ga0070702_100080080All Organisms → cellular organisms → Bacteria1953Open in IMG/M
3300005617|Ga0068859_100699114All Organisms → cellular organisms → Bacteria1105Open in IMG/M
3300005719|Ga0068861_101119797All Organisms → cellular organisms → Bacteria757Open in IMG/M
3300005840|Ga0068870_10737848All Organisms → cellular organisms → Bacteria683Open in IMG/M
3300005842|Ga0068858_100101406All Organisms → cellular organisms → Bacteria2684Open in IMG/M
3300005873|Ga0075287_1022076All Organisms → cellular organisms → Bacteria800Open in IMG/M
3300005874|Ga0075288_1012574All Organisms → cellular organisms → Bacteria1142Open in IMG/M
3300005888|Ga0075289_1035101All Organisms → cellular organisms → Bacteria756Open in IMG/M
3300006577|Ga0074050_12066472All Organisms → cellular organisms → Bacteria766Open in IMG/M
3300006580|Ga0074049_13134427All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300006604|Ga0074060_12039353All Organisms → cellular organisms → Bacteria720Open in IMG/M
3300006845|Ga0075421_101244944All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria827Open in IMG/M
3300006954|Ga0079219_12354087All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia516Open in IMG/M
3300009093|Ga0105240_10079260All Organisms → cellular organisms → Bacteria4042Open in IMG/M
3300009137|Ga0066709_100631734All Organisms → cellular organisms → Bacteria1530Open in IMG/M
3300009176|Ga0105242_10108863All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2359Open in IMG/M
3300009553|Ga0105249_10129066All Organisms → cellular organisms → Bacteria2411Open in IMG/M
3300010373|Ga0134128_10233465All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2066Open in IMG/M
3300010373|Ga0134128_12778314Not Available539Open in IMG/M
3300010399|Ga0134127_10337815All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1466Open in IMG/M
3300010400|Ga0134122_11115542All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria783Open in IMG/M
3300010403|Ga0134123_10774201All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria949Open in IMG/M
3300011106|Ga0151489_1522221All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria772Open in IMG/M
3300011107|Ga0151490_1130131All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria554Open in IMG/M
3300012212|Ga0150985_104050588Not Available571Open in IMG/M
3300012469|Ga0150984_114113300Not Available720Open in IMG/M
3300012951|Ga0164300_10891329All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria561Open in IMG/M
3300012961|Ga0164302_10019605All Organisms → cellular organisms → Bacteria2897Open in IMG/M
3300012961|Ga0164302_11082414All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria631Open in IMG/M
3300012984|Ga0164309_11096416All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria662Open in IMG/M
3300012985|Ga0164308_10282073All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1310Open in IMG/M
3300012985|Ga0164308_11190087All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium687Open in IMG/M
3300012989|Ga0164305_12159926Not Available511Open in IMG/M
3300013296|Ga0157374_10415258Not Available1344Open in IMG/M
3300013306|Ga0163162_10126455Not Available2663Open in IMG/M
3300013308|Ga0157375_10601495All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1259Open in IMG/M
3300015371|Ga0132258_10001831All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria38419Open in IMG/M
3300015371|Ga0132258_11511539All Organisms → cellular organisms → Bacteria1696Open in IMG/M
3300015372|Ga0132256_101037030Not Available935Open in IMG/M
3300015373|Ga0132257_100016373All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia7672Open in IMG/M
3300020082|Ga0206353_10652798Not Available762Open in IMG/M
3300022756|Ga0222622_10733877All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria719Open in IMG/M
3300025556|Ga0210120_1005924Not Available2548Open in IMG/M
3300025899|Ga0207642_10012789All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3041Open in IMG/M
3300025901|Ga0207688_10099174All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1680Open in IMG/M
3300025903|Ga0207680_10402713All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria967Open in IMG/M
3300025908|Ga0207643_10551310All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium740Open in IMG/M
3300025909|Ga0207705_10869885Not Available699Open in IMG/M
3300025912|Ga0207707_11343489All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria572Open in IMG/M
3300025914|Ga0207671_10426761All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1055Open in IMG/M
3300025916|Ga0207663_10529609All Organisms → cellular organisms → Bacteria919Open in IMG/M
3300025918|Ga0207662_10102030All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1779Open in IMG/M
3300025921|Ga0207652_10097713Not Available2589Open in IMG/M
3300025931|Ga0207644_10913533All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria736Open in IMG/M
3300025932|Ga0207690_10033295All Organisms → cellular organisms → Bacteria3313Open in IMG/M
3300025938|Ga0207704_10027333All Organisms → cellular organisms → Bacteria3146Open in IMG/M
3300025938|Ga0207704_11547650Not Available569Open in IMG/M
3300025940|Ga0207691_10456117All Organisms → cellular organisms → Bacteria1087Open in IMG/M
3300025944|Ga0207661_11372385Not Available649Open in IMG/M
3300025961|Ga0207712_10227244Not Available1496Open in IMG/M
3300025986|Ga0207658_11936359All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria537Open in IMG/M
3300026008|Ga0208529_1013433Not Available745Open in IMG/M
3300026025|Ga0208778_1009556All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria906Open in IMG/M
3300026078|Ga0207702_11928538Not Available582Open in IMG/M
3300026089|Ga0207648_10078287All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2883Open in IMG/M
3300027787|Ga0209074_10144181All Organisms → cellular organisms → Bacteria851Open in IMG/M
3300027909|Ga0209382_10443563All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1439Open in IMG/M
3300028381|Ga0268264_11382491All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria714Open in IMG/M
3300028589|Ga0247818_10845197Not Available641Open in IMG/M
3300028592|Ga0247822_10253496All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1332Open in IMG/M
3300028716|Ga0307311_10276245All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria503Open in IMG/M
3300028720|Ga0307317_10131136Not Available838Open in IMG/M
3300028744|Ga0307318_10200818Not Available690Open in IMG/M
3300028771|Ga0307320_10081835All Organisms → cellular organisms → Bacteria1215Open in IMG/M
3300028784|Ga0307282_10558764Not Available556Open in IMG/M
3300028791|Ga0307290_10026520All Organisms → cellular organisms → Bacteria2041Open in IMG/M
3300028793|Ga0307299_10060529All Organisms → cellular organisms → Bacteria1400Open in IMG/M
3300028807|Ga0307305_10232266All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria845Open in IMG/M
3300028828|Ga0307312_10170624Not Available1388Open in IMG/M
3300028880|Ga0307300_10012308All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2186Open in IMG/M
3300030336|Ga0247826_10475363All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria939Open in IMG/M
3300030336|Ga0247826_10704950Not Available783Open in IMG/M
3300031093|Ga0308197_10376808Not Available548Open in IMG/M
3300031938|Ga0308175_100455074All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1351Open in IMG/M
3300031938|Ga0308175_101425036All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium773Open in IMG/M
3300031938|Ga0308175_102362899All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria596Open in IMG/M
3300031938|Ga0308175_103066009Not Available519Open in IMG/M
3300031939|Ga0308174_10967045All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium721Open in IMG/M
3300031996|Ga0308176_10781300Not Available996Open in IMG/M
3300033412|Ga0310810_11398342Not Available535Open in IMG/M
3300033433|Ga0326726_10983006All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria819Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil17.12%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil9.01%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil7.21%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere6.31%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil4.50%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil4.50%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere4.50%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere4.50%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere4.50%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.60%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.60%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.70%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.70%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.80%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.80%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.80%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.80%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.80%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.80%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.90%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.90%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.90%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.90%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.90%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.90%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.90%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.90%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.90%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.90%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.90%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.90%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004006Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005163Soil and rhizosphere microbial communities from Laval, Canada - mgHMBEnvironmentalOpen in IMG/M
3300005164Soil and rhizosphere microbial communities from Laval, Canada - mgLACEnvironmentalOpen in IMG/M
3300005169Soil and rhizosphere microbial communities from Laval, Canada - mgHPAEnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005873Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301EnvironmentalOpen in IMG/M
3300005874Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404EnvironmentalOpen in IMG/M
3300005888Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103EnvironmentalOpen in IMG/M
3300006577Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006580Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006604Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011106Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011107Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300020082Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025556Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025909Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026008Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_202 (SPAdes)EnvironmentalOpen in IMG/M
3300026025Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103 (SPAdes)EnvironmentalOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028589Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1EnvironmentalOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028716Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198EnvironmentalOpen in IMG/M
3300028720Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357EnvironmentalOpen in IMG/M
3300028744Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367EnvironmentalOpen in IMG/M
3300028771Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028791Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028880Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300031093Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
C688J35102_12080338333300002568SoilVRRLLLIGVVASAAVALYRRAQEIAEQEDRPIADVVTDLPRRLWHDLETIPDDLRAAAEEGAAAAQRSAESVDAAG*
Ga0055453_1003976533300004006Natural And Restored WetlandsVRRLLLVGVVASAAVALYRRAQEIADEEDRPLADVLTDLPRRLWQDIETIPDDLRSAAEEGVAAAQRSAESVDA*
Ga0062595_10005693833300004479SoilVRRLLLVGAVASAAVALYRRAQEIADEEDRPLADVVTDLPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVDA*
Ga0062595_10030316313300004479SoilVRRLLLIGAVASAAVALYRRAQEIADEEGRPLSDVLSDLPRRLWQDLESIPDDLRSAAEEGVAAAHRSAESVDATG*
Ga0066823_1004821933300005163SoilAVALYRRAQEIAEQEDRPLADVITDMPRRLWHDLETIPDDLRTAAEEGAAAAHRSADSVDPVG*
Ga0066815_1004585523300005164SoilVRRLLLVGVVASAAVALYRRAQEIAEQEDRPLADVITDMPRRLWHDLETIPNDLRTAAEEGAAAAHRSADSVDPVG*
Ga0066810_1000175143300005169SoilVRRLLLVGVVASAAVALYRRAQEIAEQEERPLADVITDLPRRLWHDLETIPDDLRAAAEEGAAAAHRSAESVDAAS*
Ga0070683_10086233533300005329Corn RhizosphereVRRLLLVGAVASAAVALYRRAQEIADEEDRPLADVVTDLPRRLWNDLGSIPDDLRSAAEEGVAA
Ga0070666_1135017923300005335Switchgrass RhizosphereVRRLLLVGVVASAAVALYRRAQEIADEEDRPLADVVTDLPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVDA*
Ga0070680_10025922333300005336Corn RhizosphereVRRLLLVGVVASAAVALYRRAQEIADEEDRPLADVVTDMPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVDA*
Ga0070660_10041891423300005339Corn RhizosphereVRRLLLVGAVASAAVALYRRAQEIADEEDRPLADVVTDLPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVDAFDR*
Ga0070671_10013834333300005355Switchgrass RhizosphereVRRLLLVGVVASAAVALYRRAQEIADEEERPLSDVVTDLPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVDA*
Ga0070688_10002331333300005365Switchgrass RhizosphereVRRLLLVGAVASAAVALYRRAQEIADEEDRPLADVVTDMPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVDA*
Ga0070711_10046362323300005439Corn, Switchgrass And Miscanthus RhizosphereVRRLLLVGVVVSAAVALYRRAQEIAEQEERPLADVITDMPRRLWHDLETIPDDLRTAAEEGAAAAHRSADSVDPVG*
Ga0070663_10009651023300005455Corn RhizosphereVRRLLLVGVVASAAVALYRRAQEIADEEDRPLADVVTDLPRRLWNDLGSLPDDLRSAAEEGVAAAHRSADSVDA*
Ga0070662_10066007813300005457Corn RhizosphereVRRLLLVGVVASAAVALYRRAQEIADEEDRPLADVVTDMPRRLWNDLGSIPDDLRSAAEEGVTAAHRSADSVDA*
Ga0068867_10051503933300005459Miscanthus RhizosphereVRRLLLAGVVASAAVALYRRAQEIADEEGRPLADVVTDLPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVDAFDR*
Ga0070693_10000303633300005547Corn, Switchgrass And Miscanthus RhizosphereVRRLLLVGVVASAAVALYRRAQEIADEEDRPLADVVTDLPRRLWNDLGSLPDDLRSAAEEGVAAAHRSADSVDAFDR*
Ga0068856_10068517733300005614Corn RhizosphereVRRLLLVGVVASAAVALYRRAQEIADEEERPLSDVVTDLPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVDAFDR*
Ga0068856_10200027313300005614Corn RhizosphereVRRLLLIGAVASAAVALYRRAQEIADEEGRPLSDVLSDLPRRLWQDLESIPDDLRSAAEE
Ga0070702_10008008033300005615Corn, Switchgrass And Miscanthus RhizosphereASAAVALYRRAQEIADEEDRPLADVVTDLPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVDA*
Ga0068859_10069911433300005617Switchgrass RhizosphereASAAVALYRRAQEIADEEERPLADVVTDLPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVDA*
Ga0068861_10111979713300005719Switchgrass RhizosphereLVGVVASAAVALYRRAQEIADEEDRPLADVVTDLPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVDA*
Ga0068870_1073784833300005840Miscanthus RhizosphereSAAVALYRRAQEIADEEDRPLADVVTDLPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVDA*
Ga0068858_10010140623300005842Switchgrass RhizosphereVRRLLLAGVVASAAVALYRRAQEIADEEERPLADVVTDLPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVDA*
Ga0075287_102207623300005873Rice Paddy SoilLRRLLLVGVVASAAVALYRRAQEIADEEDRPLSDVLTDLPKRLWQDIETIPDDLRSAAEEGVAAAQRSADSVDA*
Ga0075288_101257413300005874Rice Paddy SoilVRRLLLVGVVASAAVALYRRAQEISDEEDRPLGDVVTDLPRRLWNDLGSIPDDLCSAAEEGVAAAHRSADSVDA*
Ga0075289_103510123300005888Rice Paddy SoilLRRLLLVGVVASAAVALYRRAQEIADEEDRPLADVVTDLPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVDA*
Ga0074050_1206647213300006577SoilVRRLLLVGVVASAAVALYRRAQEIAEQEERPLADVVTDLPRRLWHDLETIPDDLRAAAEEGAA
Ga0074049_1313442723300006580SoilVRRLLLVGVVASAAVALYRRAQEIAEQEERPLADVVTDLPRRLWHDLETIPDDLRAAAEEGAAAAHRSAESVDAAAD*
Ga0074060_1203935333300006604SoilSSPRRRSVRRLLLVGVVASAAVALYRRAQEIAEQEERPLADVITDMPRRLWHDLETIPDDLRTAAEEGAAAAHRSADSVDPVG*
Ga0075421_10124494433300006845Populus RhizosphereVRRLLLVGVVASAAVALYRRAQEIADEEDRPLADVVTDMPRRLWNDLGSIPDDLRSAA
Ga0079219_1235408713300006954Agricultural SoilVRRLLLVGAAVSAAVALYRRAEEIADEEERPLSDVVTDLPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVDAFDR*
Ga0105240_1007926013300009093Corn RhizosphereVRRLLLVGAVASAAVALYRRAQEIADEEDRPLADVVTDLPRRLWNDLGSLPDDLRSAAEEGVAAAHRSADSVDAFDR*
Ga0066709_10063173433300009137Grasslands SoilLLLAGVVASAAVALYRRAQEIAEQEERPLADVVTDLPRRLWHDLVTIPDDLRAAAGEGAAAAHRSAESVDAI*
Ga0105242_1010886323300009176Miscanthus RhizosphereVRRLLLVGAVASAAVALYRRAQEIADEEGRPLADVVTDLPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVDAFDR*
Ga0105249_1012906633300009553Switchgrass RhizosphereVRRLLLVGAVASAAVALYRRAQEIADEEERPLADVVTDLPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVDA*
Ga0134128_1023346533300010373Terrestrial SoilVRRLLLVGVVASAAVALYRRAQEIADEEGRPLADVVTDLPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVDA*
Ga0134128_1277831423300010373Terrestrial SoilVRRLLLVGVVVSAAVALYRRAQEIAEQEERPLADVITDMPRRLWHDLETIPDDLRTAAEEGAAAA
Ga0134127_1033781533300010399Terrestrial SoilVRRLLLVGVVASAAVALYRRAQAIADEEDRPLADVVTDLPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVDA*
Ga0134122_1111554233300010400Terrestrial SoilRRSVRRLLLVGVVASAAVALYRRAQEIADEEDRPLADVVTDLPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVDA*
Ga0134123_1077420133300010403Terrestrial SoilVRRLLLVGAVASAAVALYRRAQEIADEEGRPLADVVTDLPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVDA*
Ga0151489_152222123300011106SoilVRRLLLVGVVVSAAVALYRRAQEIAEQEERPLADVITDMPRRLWHDLETIPNDLRTAAEEGAAAAHRSADSVDPVG*
Ga0151490_113013113300011107SoilPRRRSVRRLLLVGVVASAAVALYRRAQEIAEQEDRPLADVITDMPRRLWHDLETIPNDLRTAAEEGAAAAHRSADSVDPVG*
Ga0150985_10405058823300012212Avena Fatua RhizosphereVRRLLLIGVVASAAVALYRRAQEIAEQEDRPIADVVTDLPRRLWHDLETIPDDLRAAAEE
Ga0150984_11411330013300012469Avena Fatua RhizosphereVRRLLLIGVVASAAVALYRRAQEIAEQEDRPIADVVTDLPRRLWHDLETIPDDLRAAAE
Ga0164300_1089132923300012951SoilVVASAAVALYRRAQEIAEDEERPLADVITDLPRRLWHDIETIPDDLRAAAEEGAAAGHRSADRVDATA*
Ga0164302_1001960513300012961SoilVRRLLVVGVVVSAAVALYRRAQEIAEQEERPLADVITDMPRRLWHDLETIPDDLRTAAEEGAAAAHRSADSVDPVG*
Ga0164302_1108241423300012961SoilVRRLLLIGVFASAAVALYRRAQEIAEDEERPLADVITDLPRRLWHDIETIPDDLRAAAEEGAAAGHRSADRVDATT*
Ga0164309_1109641633300012984SoilAAVALYRRAQEIAEDEERPLADVITDLPRRLWHDIETIPDDLRAAAEEGAAAGHRSADRVDATT*
Ga0164308_1028207333300012985SoilLLLVGVVASAAVALYRRAQEIAEQEERPLADVITDMPRRLWHDLETIPDDLRTAAEEGAAAAHRSADSVDPVG*
Ga0164308_1119008723300012985SoilVRRLLLVGAVASAAVALYRRAQEIADEEDRPLADVVTDLPRRLWNDLGSIPDDLRSAAEEGVAAAHRTADSVDA*
Ga0164305_1215992613300012989SoilVRRLLLVGAVASAAVALYRRAQEIADEEDRPLADVVTDLPRRLWNDLGSIPDDLCSAAEE
Ga0157374_1041525833300013296Miscanthus RhizosphereVRRLLLVGAVASAAVALYRRAQEIADEEDRPLADVVTDMPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVDA
Ga0163162_1012645533300013306Switchgrass RhizosphereVRRLLLVGAVASAVVALYRRAQEIADEEDRPLADVVTDLPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVDA*
Ga0157375_1060149533300013308Miscanthus RhizosphereVRRLLLVGVVASAAVALYRRAQEIADEEDRPLADVVTDLPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVDAFDR*
Ga0132258_10001831153300015371Arabidopsis RhizosphereVRRLLLVGVVASTAVALYRRAQEIADEEDRPLTDVVSEMPRRLWQDLQTIPDDLRKATEEGVAAAHRSADSVDAAAP*
Ga0132258_1151153933300015371Arabidopsis RhizosphereVRRLLLIGVVASAAVALYRRAQEIAEEEERPLADVVTDLPRRLWHDIESLPDDLRAAAEEGAAAAHRSADRVDATT*
Ga0132256_10103703013300015372Arabidopsis RhizosphereVRRLLLVGVVASTAVALYRRAQEIADEEDRPLTDVVSEMPRRLWQDLQTIPDDLRKATEEGVAAAHRSADSVDAA
Ga0132257_10001637333300015373Arabidopsis RhizosphereVRRLLLVGAVASAAVAFYRRAQEIADEEDRPLADVVTDLPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVDA*
Ga0206353_1065279813300020082Corn, Switchgrass And Miscanthus RhizosphereVRRLLLVGVVASAAVALYRRAQEIADEEDRPLADVVTDLPRRLWSDLGSIPDDLRSAAEEGVAAAHRSADSVDA
Ga0222622_1073387723300022756Groundwater SedimentVRRLVLIGVVASAAVALYRRAQEIAEQEDRPIADVVTDLPRRLWRDLGTIPDDLRAAAEEGAAAAHRSAESVDA
Ga0210120_100592433300025556Natural And Restored WetlandsVRRLLLVGVVASAAVALYRRAQEIADEEDRPLADVLTDLPRRLWQDIETIPDDLRSAAEEGVAAAQRSAESVDA
Ga0207642_1001278933300025899Miscanthus RhizosphereVRRLLLVGVVASAAVALYRRAQEIADEEDRPLADVVTDLPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVDA
Ga0207688_1009917433300025901Corn, Switchgrass And Miscanthus RhizosphereVRRLLLVGAVASAAVALYRRAQEIADEEDRPLADVVTDLPRRLWNDLGSLPDDLRSAAEEGVAAAHRSADSVDA
Ga0207680_1040271323300025903Switchgrass RhizosphereVRRLLLVGAVASAAVALYRRAQEIADEEDRPLADVVTDLPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVDA
Ga0207643_1055131013300025908Miscanthus RhizosphereVRRLLLVGAVASAAVALYRRAQEIADEEDRPLADVVTDLPRRLWNDLGSIPDDLRSAAEEGVAAAHR
Ga0207705_1086988523300025909Corn RhizosphereVRRLLLVGVVASAAVALYRRAQEIADEEDRPLADVVTDMPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVDAFDR
Ga0207707_1134348923300025912Corn RhizosphereVRRLLLVGVVASAAVALYRRAQEIADEEERPLADVVTDLPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVDAFDR
Ga0207671_1042676133300025914Corn RhizosphereRQARPPRRRPVRRLLLVGVVASAAVALYRRAQEIADEEDRPLADVVTDLPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVDA
Ga0207663_1052960933300025916Corn, Switchgrass And Miscanthus RhizosphereDVPGQARSPRRRSVRRLLLVGVVVSAAVALYRRAQEIAEQEERPLADVITDMPRRLWHDLETIPDDLRTAAEEGAAAAHRSADSVDPVG
Ga0207662_1010203033300025918Switchgrass RhizosphereVRRLLLVGVVASAAVALYRRAQEIADEEDRPLADVVTDLPRRLWNDLGSLPDDLRSAAEEGVAAAHRSADSVDAFDR
Ga0207652_1009771333300025921Corn RhizosphereVRRLLLVGAVASAAVALYRRAQEIADEEDRPLADVVTDLPRRLWNDLGSLPDDLRSAAEEGVAAAHRSADSVDAFDR
Ga0207644_1091353323300025931Switchgrass RhizosphereVRRLLLVGVVASAAVALYRRAQEIADEEERPLSDVVTDLPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVDA
Ga0207690_1003329553300025932Corn RhizosphereVRRLLLVGAVASAAVALYRRAQEIADEEDRPLADVVTDLPRRLWNDLGSIPDDLRSAAEEGVAAAHRS
Ga0207704_1002733313300025938Miscanthus RhizosphereVRRLLLVGVVASAAVALYRRAQEIADEEERPLADVVTDLPRRLWNDLGSLPDDLRSAAEEGVAAAHRSADSVDAFDR
Ga0207704_1154765033300025938Miscanthus RhizosphereVRRLLLVGVVVSAAVALYRRAQEIAEQEERPLADVITDMPRRLWHDLETIPDDLRTAAE
Ga0207691_1045611723300025940Miscanthus RhizosphereVRRLLLVGVVASAAVALYRRAQEIADEEDRPLADVVTDMPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVDA
Ga0207661_1137238513300025944Corn RhizosphereVRRLLLIGAVASAAVALYRRAQEIADEEGRPLSDVLSDLPRRLWQDLESIPDDLRSAAEEGVAAAHRSAESVDATG
Ga0207712_1022724433300025961Switchgrass RhizosphereVRRLLLVGAVASAAVALYRRAQEIADEEERPLADVVTDLPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVDA
Ga0207658_1193635923300025986Switchgrass RhizosphereAVALYRRAQEIADEEDRPLADVVTDLPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVD
Ga0208529_101343313300026008Rice Paddy SoilLRRLLLVGVVASAAVALYRRAQEIADEEDRPLSDVLTDLPKRLWQDIETIPDDLRSAAEEGVAAAQRSADSVDA
Ga0208778_100955633300026025Rice Paddy SoilLRRLLLVGVVASAAVALYRRAQEIADEEDRPLADVVTDLPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVDA
Ga0207702_1192853823300026078Corn RhizosphereVRRLLLIGAVASAAVALYRRAQEIADEEGRPLSDVLSDLPRRLWQDLESIPDDLRSAAE
Ga0207648_1007828733300026089Miscanthus RhizosphereVRRLLLVGAVASAAVALYRRAQEIADEEDRPLADVVTDLPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVDAFDR
Ga0209074_1014418113300027787Agricultural SoilASAAVALYRRAQEIADEEERPLADVVTDLPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVDAFDR
Ga0209382_1044356333300027909Populus RhizosphereVRRLLLVGVVASAAVALYRRAQEIADEEDRPLADVVTDMPRRLWNDLGSIPDDLRSAAEEGRRPPVGRQRRRVDR
Ga0268264_1138249113300028381Switchgrass RhizosphereLLVGVVASAAVALYRRAQEIADEEDRPLADVVTDMPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVDA
Ga0247818_1084519713300028589SoilVRRLLVIGVVASAAVALYRRAQEIAQDEERPLADVVTDLPRRLWHDIETIPDDLRSAERW
Ga0247822_1025349633300028592SoilARRRPVRRLLLVGVVASAAVALYRRAQEIADEEDRPLADVVTDLPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVDA
Ga0307311_1027624513300028716SoilVGAVASAAIALYRRVQEIAEQEERPLADVLTDLPRRLWQDLDTIPDDLREAADEGVAAAHRSAESVDAAG
Ga0307317_1013113613300028720SoilVRRLVLIGVVASAAVALYRRAQEIAEQEDRPIADVVTDLPRRLWRDLGTIPDDLRAAAEEGAAAAH
Ga0307318_1020081813300028744SoilVRRLLLVGVVASAAVALYRRAQEIAEQEERPLVDVVTDLPRRLWRDLESIPDDLREA
Ga0307320_1008183513300028771SoilVVASAAVALYRRAQEIAEQEERPLVDVVTDLPRRLWQDIESIPEDLREATEEGVAAAHRSANGVDLA
Ga0307282_1055876413300028784SoilVRRLVLIGVVASAAVALYRRAQEIAEQEDRPIADVVTDLPRRLWRDLGTIPDDLRAAAEEGAAAAHR
Ga0307290_1002652033300028791SoilCPVRRLVLIGVVASAAVALYRRAQEIAEQEDRPIADVVTDLPRRLWRDLGTIPDDLRAAAEEGAAAAHRSAESVDA
Ga0307299_1006052913300028793SoilDVPGQARPPRRRPVRRLLLIGVVASAAVALYRRAQEIAEQEDRPIADVVTDLPRRLWRDLGTIPDDLRAAAEEGAAAAHRSAESVDA
Ga0307305_1023226633300028807SoilVRRLLLVGAVASAAIALYRRVQEIAEQEERPLADVLTDLPRRLWQDLETIPDDLREAADEGVAAAHRSAESVDAAG
Ga0307312_1017062423300028828SoilVRRLLLVGAVASAAIALYRRVQEIAEQEERPLADVLTDLPRRLWQDLDTIPDDLREAADEGVAAAHRSAESVDAAG
Ga0307300_1001230823300028880SoilVRRLLLVGVVASAAVALYRRAQEIAEQEERPLVDVVTDLPRRLWQDLESIPDDLREAREEGVAAAHRSANGVDPA
Ga0247826_1047536333300030336SoilVRRLLVIGVVASAAVALYRRAQEIAQDEERPLADVVTDLPRRLWHDIETIPDDLRSAAEEGAAAAHRSADRVDATS
Ga0247826_1070495013300030336SoilVRRLLLIGVVASAAVALYRRAQEIAEDEERPLADVITDLPRRLWHDIETIPDDLRAAAEE
Ga0308197_1037680823300031093SoilVRRLVLIGVVASAAVALYRRAQEIAEQEERPLVDVVTDLPRRLWRDLESIPDDLREA
Ga0308175_10045507413300031938SoilPVRRLLLVGVVASAAVALYRRAQEIADEEDRPLADVVTDLPRRLWNDLGSIPDDLRSAAEEGVAAAHRSADSVDAAI
Ga0308175_10142503613300031938SoilVRRLLLIGAVASAAVALYRRAQEIADEEGRPLSDVLSDLPRRLWQDLESIPDDLRSAAD
Ga0308175_10236289923300031938SoilLVGMVASAAVALYRRAQEMAAEEGRPLADVLSDLPRRLWHDIETIPDDLRSAAEEGAAAAHRSAESVDSTI
Ga0308175_10306600913300031938SoilVRRLLLIGAVASAAVALYRRAQEIADEEDRPLSDVLSDLPRRLWQDLESIPDDLRSAAEEGVAAAHRSAESVDATG
Ga0308174_1096704533300031939SoilVRRLLLIGAVASAAVALYRRAQEIADEEGRPLSDVLSDLPRRLWQDLESIPDDLRSAAEEGVAAAH
Ga0308176_1078130033300031996SoilVRRLLLVGMVASAAVALYRRAQEMAAEEGRPLADVLSDLPRRLWHDIETIPDDLRSAAEEGAAAAHRS
Ga0310810_1139834213300033412SoilVRRLLLIGAVASAAVALYRRAQEIADEEGRPLSDVLSDLPRRLWQDLESIPDDLRSA
Ga0326726_1098300623300033433Peat SoilVRRLLLIGVVASAAVALYRRAQEIAEQEERPLADVVTDLPRRLWHDLETIPDDLRAAAEEGAAAAHRSADSVDTAAD

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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