Metagenome / Metatranscriptome Family F085672

Basic Information
Family ID	F085672
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	88 residues
Representative Sequence	MSEERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSAGDLITVTKPAATELDPVEPLLVYVTRVEPNADTPIRATEAKGVRVETTDELIVAA
Number of Associated Samples	97
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.60 %
% of genes near scaffold ends (potentially truncated)	47.75 %
% of genes from short scaffolds (< 2000 bps)	82.88 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (70.270 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (21.622 % of family members)
Environment Ontology (ENVO)	Unclassified (35.135 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.649 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 47.25% Coil/Unstructured: 52.75%
Feature Viewer

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Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF16317	Glyco_hydro_99	33.33
PF14561	TPR_20	4.50
PF00583	Acetyltransf_1	3.60
PF01979	Amidohydro_1	2.70
PF05711	TylF	0.90
PF00483	NTP_transferase	0.90
PF00376	MerR	0.90
PF13464	DUF4115	0.90

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.27 %
Unclassified	root	N/A	29.73 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.27 %
Unclassified	root	N/A	29.73 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.27 %
Unclassified	root	N/A	29.73 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	65.77 %
Unclassified	root	N/A	29.73 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	63.06 %
Unclassified	root	N/A	29.73 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.73 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11.71 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.73 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	8.11 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.80 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.73 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.11 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.80 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2001200001\|2001297459	Not Available	998	Open in IMG/M
3300003996\|Ga0055467_10291473	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300004643\|Ga0062591_100072271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2094	Open in IMG/M
3300005327\|Ga0070658_10156178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1913	Open in IMG/M
3300005328\|Ga0070676_11240576	Not Available	568	Open in IMG/M
3300005329\|Ga0070683_100290857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1554	Open in IMG/M
3300005329\|Ga0070683_100451320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1227	Open in IMG/M
3300005329\|Ga0070683_100539076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1116	Open in IMG/M
3300005329\|Ga0070683_101885176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	574	Open in IMG/M
3300005330\|Ga0070690_100730005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	763	Open in IMG/M
3300005331\|Ga0070670_100200788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1732	Open in IMG/M
3300005334\|Ga0068869_100480009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1035	Open in IMG/M
3300005337\|Ga0070682_100106520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1860	Open in IMG/M
3300005337\|Ga0070682_100289790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1197	Open in IMG/M
3300005338\|Ga0068868_100239305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1524	Open in IMG/M
3300005347\|Ga0070668_100322707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1300	Open in IMG/M
3300005356\|Ga0070674_100374373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1157	Open in IMG/M
3300005367\|Ga0070667_100403301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1245	Open in IMG/M
3300005535\|Ga0070684_101857045	Not Available	569	Open in IMG/M
3300005544\|Ga0070686_100019965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3959	Open in IMG/M
3300005564\|Ga0070664_100088355	All Organisms → cellular organisms → Bacteria	2680	Open in IMG/M
3300005719\|Ga0068861_100491230	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300005840\|Ga0068870_10339276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	961	Open in IMG/M
3300006058\|Ga0075432_10026846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1980	Open in IMG/M
3300006573\|Ga0074055_11621762	Not Available	636	Open in IMG/M
3300006575\|Ga0074053_11998855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1683	Open in IMG/M
3300006904\|Ga0075424_102079348	Not Available	599	Open in IMG/M
3300009036\|Ga0105244_10416071	Not Available	618	Open in IMG/M
3300009094\|Ga0111539_11318211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	838	Open in IMG/M
3300009148\|Ga0105243_10050055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3299	Open in IMG/M
3300009156\|Ga0111538_11880083	All Organisms → cellular organisms → Bacteria → Terrabacteria group	753	Open in IMG/M
3300009553\|Ga0105249_10442633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1337	Open in IMG/M
3300009870\|Ga0131092_10002357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	39942	Open in IMG/M
3300009873\|Ga0131077_10022805	All Organisms → cellular organisms → Bacteria	10551	Open in IMG/M
3300009873\|Ga0131077_10058842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5203	Open in IMG/M
3300009873\|Ga0131077_10705538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	895	Open in IMG/M
3300009873\|Ga0131077_11691442	Not Available	515	Open in IMG/M
3300010371\|Ga0134125_10789251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1045	Open in IMG/M
3300010375\|Ga0105239_12358487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	619	Open in IMG/M
3300010399\|Ga0134127_10169117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2005	Open in IMG/M
3300010401\|Ga0134121_11715554	Not Available	652	Open in IMG/M
3300010403\|Ga0134123_10582823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1071	Open in IMG/M
3300011119\|Ga0105246_10741870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	865	Open in IMG/M
3300012515\|Ga0157338_1056122	Not Available	579	Open in IMG/M
3300012897\|Ga0157285_10151328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	690	Open in IMG/M
3300012899\|Ga0157299_10099179	Not Available	750	Open in IMG/M
3300012900\|Ga0157292_10110037	Not Available	833	Open in IMG/M
3300012903\|Ga0157289_10002054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2939	Open in IMG/M
3300012905\|Ga0157296_10009411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1630	Open in IMG/M
3300012906\|Ga0157295_10256083	Not Available	589	Open in IMG/M
3300012907\|Ga0157283_10396579	Not Available	512	Open in IMG/M
3300012912\|Ga0157306_10177065	All Organisms → cellular organisms → Bacteria → Terrabacteria group	698	Open in IMG/M
3300012914\|Ga0157297_10019748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1496	Open in IMG/M
3300012943\|Ga0164241_11138063	Not Available	575	Open in IMG/M
3300012943\|Ga0164241_11377500	Not Available	520	Open in IMG/M
3300012951\|Ga0164300_11039561	Not Available	530	Open in IMG/M
3300012961\|Ga0164302_10826000	Not Available	702	Open in IMG/M
3300012984\|Ga0164309_10482562	Not Available	945	Open in IMG/M
3300012986\|Ga0164304_11443612	Not Available	567	Open in IMG/M
3300012987\|Ga0164307_11487903	Not Available	572	Open in IMG/M
3300013296\|Ga0157374_10720606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1011	Open in IMG/M
3300013297\|Ga0157378_10566202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1143	Open in IMG/M
3300013307\|Ga0157372_10690120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1188	Open in IMG/M
3300013308\|Ga0157375_10635464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1224	Open in IMG/M
3300015201\|Ga0173478_10154784	Not Available	915	Open in IMG/M
3300015371\|Ga0132258_10071814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8031	Open in IMG/M
3300015371\|Ga0132258_10483608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3093	Open in IMG/M
3300015373\|Ga0132257_103893861	Not Available	543	Open in IMG/M
3300019356\|Ga0173481_10004324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3719	Open in IMG/M
3300019361\|Ga0173482_10134193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	944	Open in IMG/M
3300019361\|Ga0173482_10546265	Not Available	572	Open in IMG/M
3300019362\|Ga0173479_10005522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3040	Open in IMG/M
3300019362\|Ga0173479_10495144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	615	Open in IMG/M
3300021445\|Ga0182009_10167208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1054	Open in IMG/M
3300022880\|Ga0247792_1030993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	935	Open in IMG/M
3300022880\|Ga0247792_1109409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	573	Open in IMG/M
3300022883\|Ga0247786_1004743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2536	Open in IMG/M
3300022889\|Ga0247785_1001304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2264	Open in IMG/M
3300022915\|Ga0247790_10180734	Not Available	554	Open in IMG/M
3300023067\|Ga0247743_1014429	Not Available	988	Open in IMG/M
3300023073\|Ga0247744_1059515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	636	Open in IMG/M
3300023266\|Ga0247789_1002596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2701	Open in IMG/M
3300025321\|Ga0207656_10049523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1812	Open in IMG/M
3300025321\|Ga0207656_10468992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	637	Open in IMG/M
3300025893\|Ga0207682_10065772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1527	Open in IMG/M
3300025900\|Ga0207710_10306715	Not Available	803	Open in IMG/M
3300025907\|Ga0207645_10121962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1692	Open in IMG/M
3300025913\|Ga0207695_11665063	Not Available	519	Open in IMG/M
3300025917\|Ga0207660_11114279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	643	Open in IMG/M
3300025920\|Ga0207649_10083518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2073	Open in IMG/M
3300025920\|Ga0207649_10475022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	947	Open in IMG/M
3300025937\|Ga0207669_10992182	Not Available	705	Open in IMG/M
3300025938\|Ga0207704_11761316	Not Available	533	Open in IMG/M
3300025942\|Ga0207689_10043352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3719	Open in IMG/M
3300025944\|Ga0207661_10188413	All Organisms → cellular organisms → Bacteria	1807	Open in IMG/M
3300025972\|Ga0207668_10958120	Not Available	763	Open in IMG/M
3300028379\|Ga0268266_10584486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1072	Open in IMG/M
3300028381\|Ga0268264_11138475	Not Available	789	Open in IMG/M
3300028592\|Ga0247822_10338843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1159	Open in IMG/M
3300028809\|Ga0247824_10312777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	887	Open in IMG/M
3300028812\|Ga0247825_10094883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2015	Open in IMG/M
3300030336\|Ga0247826_10210537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1337	Open in IMG/M
3300031455\|Ga0307505_10573236	Not Available	547	Open in IMG/M
3300031547\|Ga0310887_10128512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1299	Open in IMG/M
3300031892\|Ga0310893_10351014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	636	Open in IMG/M
3300032013\|Ga0310906_10170846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1290	Open in IMG/M
3300032122\|Ga0310895_10038076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1695	Open in IMG/M
3300032211\|Ga0310896_10037986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1863	Open in IMG/M
3300033412\|Ga0310810_10242563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1991	Open in IMG/M
3300033550\|Ga0247829_11452285	Not Available	566	Open in IMG/M
3300033551\|Ga0247830_10116598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1904	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	57.66%
Host-Associated	Host-Associated	37.84%
Engineered	Engineered	4.50%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.76%
Plants	Host-Associated → Plants	37.84%
Wastewater	Engineered → Wastewater	4.50%
Aquatic	Environmental → Aquatic	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.13%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.71%
Activated Sludge	Engineered → Wastewater → Activated Sludge	4.50%
Marine	Environmental → Aquatic → Marine	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.51%
Soil	Host-Associated → Plants → Rhizosphere → Soil	12.61%
Loam	Environmental → Terrestrial → Soil → Loam	9.91%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.01%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	4.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.70%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	12.61%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	9.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.91%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.01%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.01%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	4.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.70%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	21.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	9.91%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	8.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	7.21%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.50%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.60%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.60%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.70%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.80%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.80%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.90%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2001200001	Soil microbial communities from Waseca County, Minnesota, USA - Sample 10150	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009870	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Linkou plant	Engineered	Open in IMG/M
3300009873	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Wenshan plant	Engineered	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012515	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610	Host-Associated	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022880	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S106-311C-6	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300022889	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S096-311B-4	Environmental	Open in IMG/M
3300022915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4	Environmental	Open in IMG/M
3300023067	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S221-509R-5	Environmental	Open in IMG/M
3300023073	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S154-409C-5	Environmental	Open in IMG/M
3300023266	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S220-509R-4	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2001349474	2001200001	Soil	MSEERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSAGDLITVTKPAATELDPVEPLLVYVTRVEPNADTPIRATEAKGLSVETTDELIVAA
Ga0055467_102914731	3300003996	Natural And Restored Wetlands	MSEERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSAGDLITVTKSAATELDSPEPLVVYVTRVEPNAETPIRATEAKGVRVETTDELIVAA*
Ga0062591_1000722712	3300004643	Soil	MRAGPGLPYFEVGAYRYTAEWLPSAGDLITITKPAATDLDPVEPLLVYVTRVEPNADTPIRATEAKGVRVETTDELIVAA*
Ga0070658_101561782	3300005327	Corn Rhizosphere	MSEERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSAGDLITVTKPAATELEPVEPLVVYVTRVEPNAETPIRATEAKGVRVETTDELIVAA*
Ga0070676_112405761	3300005328	Miscanthus Rhizosphere	MSDERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITITKPAATELDPVERFLVYVTRVEPNADTPIRVTEAKGVRVETTDELIVAA*
Ga0070683_1002908573	3300005329	Corn Rhizosphere	MSEERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITVTRPTATDLDPVESFLVYVTRVEPNADTPIRATEAKGVRVETTDELIVAA*
Ga0070683_1004513202	3300005329	Corn Rhizosphere	MSDERTFPVTLMRAGPGLPYFEVGAYRYTAQWLPSVGDLITITRPTAADLDPVEPLLVYVTRVEPIADTPIRATEAKGVRVETTDELIVAA*
Ga0070683_1005390761	3300005329	Corn Rhizosphere	LMRAGPGLPYFEVGAYRYTAEWLPSAGDLITITKPAATDLDPVEPLLVYVTRVEPNADTPIRATEAKGVRVETTDELIVAA*
Ga0070683_1018851762	3300005329	Corn Rhizosphere	PGLPYFEVGAYRYTAEWLPSVGDLITITKPAATELDPIEPLLVYVTRVEPNADTPIRVTEAKGVRVETTDELIVAA*
Ga0070690_1007300052	3300005330	Switchgrass Rhizosphere	MSDERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITITKPAATELDPIEPLLVYVTRVEPNADTPIRVTEAKGVRVETTDELIVAA*
Ga0070670_1002007882	3300005331	Switchgrass Rhizosphere	MSDERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITITKPAATELDAIEPLLVYVTRVEPNADTPIRVTEAKGVRVETTDELIVAA*
Ga0068869_1004800091	3300005334	Miscanthus Rhizosphere	MSEQRTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITVTKPTATDLDPVEPLLVYVTRVEPNADTPIRATEAKGVRVETTDELIVAA*
Ga0070682_1001065202	3300005337	Corn Rhizosphere	MRAGPGLPYFEVGAYRYTAEWLPSAGDLITVTKPAATELEPVEPLVVYVTRVEPNAETPIRATEAKGVRVETTDELIVAA*
Ga0070682_1002897902	3300005337	Corn Rhizosphere	FPVTLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITITKPAATELDPVEQFLVYVTRVEPNADTPIRVTEAKGVRVETTDELIVAA*
Ga0068868_1002393052	3300005338	Miscanthus Rhizosphere	MSEERTFSVTLMRAGPGLPYFEVGAYRYTAEWLPSAGDLITVTKPAATELEPVEPLVVYVTRVEPNAETPIRATEAKGVRVETTDELIVAA*
Ga0070668_1003227071	3300005347	Switchgrass Rhizosphere	RAGPGLPYFEVGAYRYTAEWLPSVGDLITITKPAATELDAIEPLLVYVTRVEPNADTPIRVTEAKGVRVETTDELIVAA*
Ga0070674_1003743731	3300005356	Miscanthus Rhizosphere	GPGLPYFEVGAYRYTAEWLPSAGDLITVTKPAATELEPVEPLVVYVTRVEPNAETPIRATEAKGVRVETTDELIVAA*
Ga0070667_1004033012	3300005367	Switchgrass Rhizosphere	HMSEERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSAGDLITVTKPAATELEPVEPLVVYVTRVEPNAETPIRATEAKGVRVETTDELIVAA*
Ga0070684_1018570451	3300005535	Corn Rhizosphere	MSEERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSAGDLITITKPAATDLDPVEPLLVYVTRVEPNADTPIRATEAKGVRVETTDELIVAA*
Ga0070686_1000199652	3300005544	Switchgrass Rhizosphere	MSEERMFPVTLMRAGPGLPYFEVGAYRYTAEWLPSAGDLITVTKPAATELEPVEPLVVYVTRVEPNAETPIRATEAKGVRVETTDELIVAA*
Ga0070664_1000883551	3300005564	Corn Rhizosphere	MSEQRTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITVTKPTATDLDPVEPLLVYVTRVEPNADTPIRATEAKGVRVETTDELIVA
Ga0068861_1004912302	3300005719	Switchgrass Rhizosphere	APRLRRPSVRHMSEERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSAGDLITVTKPAATELEPVEPLVVYVTRVEPNAETPIRATEAKGVRVETTDELIVAA*
Ga0068870_103392761	3300005840	Miscanthus Rhizosphere	AGPGLPYFEVGAYRYTAEWLPSAGDLITVTKPAATELEPVEPLVVYVTRVEPNAETPIRATEAKGVRVETTDELIVAA*
Ga0075432_100268462	3300006058	Populus Rhizosphere	MSDERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITITKPAATELDPVEQFLVYVTRVEPNADTPIRVTEAKGVRVETTDELIVAA*
Ga0074055_116217621	3300006573	Soil	MSDERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITITKPSATELDPVEPLLVYVTRVEPTADTPIRVTEAKGVRVESTDELIVAA*
Ga0074053_119988553	3300006575	Soil	MSDERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITITKPSATELDPVEPLLVYVTRVEPNADTPIRVTEAKGVRVETTDELIVAA*
Ga0075424_1020793481	3300006904	Populus Rhizosphere	MSDERTFPVTLMRAGPGLPYFEVGAYRYTAQWLPSVGDLITITRPTAGDLDPDEPLLVYVTRVEPIADTPIRATEAKGVRVETTDELIVAA*
Ga0105244_104160711	3300009036	Miscanthus Rhizosphere	MSDERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITITKPAATELDRVEPLLVYVTRVEPNADTPIRVTEAKGVRVETTDELIVAA*
Ga0111539_113182113	3300009094	Populus Rhizosphere	MSDERTFPVTLMRAGPGLPYFEVGAYRYTAQWLPSVGDLITITRPTAGDLDPVEPLLVYVTRVEPIADTPIRATEAKGVRVETTDELIVAA*
Ga0105243_100500552	3300009148	Miscanthus Rhizosphere	MSEERTFSVTLMRAGPGLPYFEVGAYRYTAEWLPSAGDLITVTKPAATELEPVEPLVVYVTRVEPNAETPIRATEAKGVRVATTDELIVAA*
Ga0111538_118800831	3300009156	Populus Rhizosphere	MSEERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSAGDLITVTKPAATELDPVERLLVYVTRVEPNADTPIRATEAKGVRVETTDELIVAA*
Ga0105249_104426334	3300009553	Switchgrass Rhizosphere	MSDERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITITKPAATELDAIEPLLVYVTRVEPNADTPIRATEAKGVRVETTDELIVAA*
Ga0131092_1000235743	3300009870	Activated Sludge	MGEDQTFPVTLMRAGHGLPYFEVAAYRYTGARLPVAGDLVMVTKAAAETDEAFLVYVTRVDPDADTPIRATEAKGVRLESPDEFIVAA*
Ga0131077_1002280512	3300009873	Wastewater	MGEEQTFPVTLMRAGRGLPYFEVAAYRYTGMSLPVAGDLITVTPSGGGETEPAGSFLVYVTRVDPNADVPIRATEAKGVSLESPDEFIVAA*
Ga0131077_100588426	3300009873	Wastewater	VGEERTFPVTLMRVGHGLPYFEIAAYRYTAAWLPVVGDLITVTKAAASETEPAEPLLVYVTRVEPNADTPIRATEARGIRVEAPDEIIVAA*
Ga0131077_107055382	3300009873	Wastewater	TLMRAGHGLPYFEVAAYRYTGARLPVAGDLVMVTKAAAETDEAFLVYVTRVDPDADTPIRATEAKGVRLESPDEFIVAA*
Ga0131077_116914421	3300009873	Wastewater	MDEERTFPVTLMRAGPGLPYFEVAAYRYTGAWLPVAGDLITVTRATGTDAEADDPGPFLVYVTRVDPDADAPIRATEAKGVSLDSPDEF
Ga0134125_107892512	3300010371	Terrestrial Soil	PYFEVGAYRYTAEWLPSVGDLITITKPAATELDPVERFLVYVTRVEPNADTPIRVTEAKGVRVETTDELIVAA*
Ga0105239_123584872	3300010375	Corn Rhizosphere	MSEERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSAGDLITITKPAATDLDPVEPLLVYVTRVEPNADTPIRAT
Ga0134127_101691173	3300010399	Terrestrial Soil	MSDERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITITKPAATELDPIEPLLVYVTRVEPNADTPIRVTEAKGVRIETTDELIVAA*
Ga0134121_117155542	3300010401	Terrestrial Soil	MSEERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSAGEVITVTKPAATELEPVEPLVVYVTRVEPNAETPIRATEAKGVRVETTDELIVAA*
Ga0134123_105828232	3300010403	Terrestrial Soil	LPYFEVGAYRYTAEWLPSVGDLITITKPAATELDPIEPLLVYVTRVEPNADTPIRVTEAKGVRVETTDELIVAA*
Ga0105246_107418702	3300011119	Miscanthus Rhizosphere	YFEVGAYRYTAEWLPSVGDLITVTRPTATDLDPVESFLVYVTRVEPNADTPIRATEAKGVRVETTDELIVAA*
Ga0157338_10561221	3300012515	Arabidopsis Rhizosphere	MSDERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITITRPTAGDLDPVEPLLVYVTRVEPIADTPIRATEAKGVRVETTDELIVAA*
Ga0157285_101513281	3300012897	Soil	MSEERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSAGDLITVTKPAATELDPVEPLLVYVTRVEPNADTPIRATEAKGLSVETTDELIVAA*
Ga0157299_100991792	3300012899	Soil	MSEERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSAGDLITVTKPAATELDPVEPLLVYVTRVEPNADTPIRATEAKGVRVETTDELIVAA*
Ga0157292_101100371	3300012900	Soil	MSEERTFPVTLMRAGPGLPYFEVGAYQYTAEWLPSAGDLITVTKPAATELEPVEPLVVYVTRVEPNAETPIRATEAKGVRVETTDELIVAA*
Ga0157289_100020542	3300012903	Soil	MSEERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSAGDLITVTKPAATELEPVEPLVVYVTRVEPNAETPIRATEAKGLSVETTDELIVAA*
Ga0157296_100094112	3300012905	Soil	MSEERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITVTKPTATDLDPVEPLLVYVTRVEPNADTPIRATEAKGVRVETTDELIVAA*
Ga0157295_102560831	3300012906	Soil	MSEERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSAGDLITVTKPAATELEPVEPLVVYVTRVEPNAETPIRATEAKGVRVATTDELIVAA*
Ga0157283_103965792	3300012907	Soil	MLDERTFAVTLMKTGSGLPLFEVGAYRYTAEWLPSAGDLITVTKPAATELDPVERLLVYVTRVEPNADTPIRATEAKGVRVETTDELIVAA*
Ga0157306_101770651	3300012912	Soil	MSEERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSASELFTVTKPAATEREPVEPLVVYVTRVEPNAETPIRATEAKGVRVETTDELIVAA*
Ga0157297_100197483	3300012914	Soil	TFPVTLMRAGPGLPYFEVGAYRYTAEWLPSAGDLITVTKPAATELEPVEPLVVYVTRVEPNAETPIRATEAKGVRVETTDELIVAA*
Ga0164241_111380632	3300012943	Soil	MSEERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITITKPAATELDSPEPFLVYVTRVEPNADTPIRVTEAKGVRVDTADELIVAA*
Ga0164241_113775001	3300012943	Soil	MSEERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSAGDLITVTKPAATEVDPVEPLLVYVTRVEPNADTPIRATEAK
Ga0164300_110395612	3300012951	Soil	AGPGLPYFAVGAYRHTGAWLPVVGDLITITKAPVAETEPAEPAEPLLVYVTRVDPSADTPIRATEAKGVRVESPGEFIVAA*
Ga0164302_108260001	3300012961	Soil	MSDERTFPVTLMRAGPGLPYFQVGAYRYTAEWLPSVGDLITITKPSATELDPVEPLLVYVTRVEPTADTPIRVTEAKGVRVESTDELIVAA*
Ga0164309_104825622	3300012984	Soil	MSDERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITITKPSATELDPVEPLLVYVTRVEPTADTPIRVTEAKGVRVETTDELIVAA*
Ga0164304_114436121	3300012986	Soil	MSDERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITITKPAATELDAIEPLLVYVTRVEPNADTPIRVTEAKGVRVESTDELIVAA*
Ga0164307_114879032	3300012987	Soil	MSDERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITITKPSATELDPVEPLLVYVTRVEPTADTPIRVTEAKGVRVESTDELIV
Ga0157374_107206062	3300013296	Miscanthus Rhizosphere	TFPVTLMRAGPGLPYFEVGAYRYTAEWLPSAGDLITVTKPAATELDPIEPLLVYVTRVEPNADTPIRVTEAKGVRVETTDELIVAA*
Ga0157378_105662021	3300013297	Miscanthus Rhizosphere	PSVRIMSDERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITITKPAATELDPIEPLLVYVTRVEPNADTPIRVTEAKGVRVETTDELIVAA*
Ga0157372_106901204	3300013307	Corn Rhizosphere	MSDERTFPVTLMRAGPGLPYFEVGAYRYTAQWLPSVGDLITITRPTAADLDPVEPLLVYVTRVEPIADTPIRATEAKGVRVETTDELIV
Ga0157375_106354644	3300013308	Miscanthus Rhizosphere	MSDERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITITKPAATELDATEPLLVYVTRVEPNADTPIRVTEAKGVRVETTDELIVAA*
Ga0173478_101547841	3300015201	Soil	MSEERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSAGDLITVTKPAATELEPVEPLVVYVTRVEPNAETPIRATEAKGV
Ga0132258_100718149	3300015371	Arabidopsis Rhizosphere	MSEERTFAVTMVRAASHGLPTFEVGAYRYTAEWLPSVGDLITITSASSTESDELASVLAYVTRVDPASETPIRVMEAKATATSESADDYIVAA*
Ga0132258_104836082	3300015371	Arabidopsis Rhizosphere	MSEERTFPVTLMRAGPGLPYFEVAAYRYTAEWLPSAGDLITVTKPAATELDPVVPLLVYVTRVEPNADTPIRATEAKGVRVETTDELIVAA*
Ga0132257_1038938612	3300015373	Arabidopsis Rhizosphere	MSEERTFAVTMVRAASHGLPTFEVGAYRYTAEWLPSVGDLITITSASSTESDELASVLAYVTRVDPASETPIRVMEAKAPATSESA
Ga0173481_100043246	3300019356	Soil	DQRIGAPRSCRPSVRIMSDERTFPVTLMRAGPGLPYFEVGAYRYTGEWLPSVGDLITVTRPTATDLDPVESFLVYVTRVEPNADTPIRATEAKGVRVETTDELIVAA
Ga0173482_101341931	3300019361	Soil	HMSEERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSAGDLITVTKPAATELEPVEPLVVYVTRVEPNAETPIRATEAKGVRVETTDELIVAA
Ga0173482_105462652	3300019361	Soil	MSEQRTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITVTKPTATDLDPVEPLLVYVTRVEPNADTPIRATEAKGVRVETTDELIVAA
Ga0173479_100055223	3300019362	Soil	MRAGPGLPYFEVGAYRYTAEWLPSAGDLITVTKPAATELEPVEPLVVYVTRVEPNAETPIRATEAKGVRVETTDELIVAA
Ga0173479_104951441	3300019362	Soil	MSEERTFPVTLMRAGPGLPYFEVGAYRSTAEWLPSAGDLVTIAKPAATDLDRVGPLLVYVTRVEPNADTPIRAT
Ga0182009_101672081	3300021445	Soil	MSEERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSAGDLITVTKPAATELDPVEPLLVYVTRVEPNADTPIRATEAKGVRVETTDELIVAA
Ga0247792_10309932	3300022880	Soil	FPVTLMRAGPGLPYFEVGAYRYTAEWLPSAGDLITVTKPAATELEPVEPLVVYVTRVEPNAETPIRATEAKGVRVETTDELIVAA
Ga0247792_11094091	3300022880	Soil	TLMRAGPGLPYFEVGAYRYTAEWLPSAGDLITITKPAATDLDPVEPLLVYVTRVEPNADTPIRATEAKGVRVETTDELIVAA
Ga0247786_10047433	3300022883	Soil	MSEERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITITKPAATELDPIEPLLVYVTRVEPNADTPIRVTEAKGVRVETTDELIVAA
Ga0247785_10013043	3300022889	Soil	MSEERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSAGDLITVTKPAATELEPVEPLVVYVTRVEPNAETPIRATEAKGVRVETTDELIVAA
Ga0247790_101807341	3300022915	Soil	MSEERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSAGDLITITKPAATDLDPVEPLLVYVTRVEPNADTPIRATEAKGVRVETTDELIVAA
Ga0247743_10144291	3300023067	Soil	MSEERTFSVTLMRAGPGLPYFEVGAYRYTAEWLPSAGDLITVTKPAATELEPVEPLVVYVTRVEPNAETPIRATEAKGVRVETTDELIVAA
Ga0247744_10595151	3300023073	Soil	GPGLPYFEVGAYRYTAEWLPSAGDLITVTKPAATELEPVEPLVVYVTRVEPNAETPIRATEAKGVRVETTDELIVAA
Ga0247789_10025964	3300023266	Soil	PSVRHMSEERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSAGDLITVTKPAATELEPVEPLVVYVTRVEPNAETPIRATEAKGVRVETTDELIVAA
Ga0207656_100495233	3300025321	Corn Rhizosphere	MSDERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITITKPAATELDPIEPLLVYVTRVEPNADTPIRVTEAKGVRVETTDELIVAA
Ga0207656_104689921	3300025321	Corn Rhizosphere	AGPGLPYFEVGAYRYTAEWLPSAGDLITVTKPAATELEPVEPLVVYVTRVEPNAETPIRATEAKGVRVETTDELIVAA
Ga0207682_100657723	3300025893	Miscanthus Rhizosphere	MSDERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITITKPPATELDAIEPLLVYVTRVEPNADTPIRVTEAKGVRVETTDELIVAA
Ga0207710_103067152	3300025900	Switchgrass Rhizosphere	TLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITITKPAATELDPIEPLLVYVTRVEPNADTPIRVTEAKGVRVETTDELIVAA
Ga0207645_101219622	3300025907	Miscanthus Rhizosphere	MSDERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITITKPAATELDPVERFLVYVTRVEPNADTPIRVTEAKGVRVETTDELIVAA
Ga0207695_116650631	3300025913	Corn Rhizosphere	PRSCRPSVRIMSDERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITITKPAATELDAIEPLLVYVTRVEPNADTPIRVTEAKGVRVETTDELIVAA
Ga0207660_111142791	3300025917	Corn Rhizosphere	IMSDERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITITKPAATELDAIEPLLVYVTRVEPNADTPIRVTEAKGVRVETTDELIVAA
Ga0207649_100835183	3300025920	Corn Rhizosphere	MSEERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSAGDLITVTRPAATELEPVEPLVVYVTRVEPNAETPIRATEAKGVRVETTDELIVAA
Ga0207649_104750221	3300025920	Corn Rhizosphere	MSDERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITITKPAATELDAIEPLLVYVTRVEPNADTPIRVTEAKGVRVETTDELIVAA
Ga0207669_109921822	3300025937	Miscanthus Rhizosphere	MFPVTLMRAGPGLPYFEVGAYRYTAEWLPSAGDLITVTKPAATELEPVEPLVVYVTRVEPNAETPIRATEAKGVRVETTDELIVAA
Ga0207704_117613161	3300025938	Miscanthus Rhizosphere	MSDERTFPVTLMRAGPGLPYFEVGAYRYTAQWLPSVGDLITITRPTAADLDPVEPLLVYVTRVEPIADTPIRATEAKGVRVETTDELIVAA
Ga0207689_100433525	3300025942	Miscanthus Rhizosphere	GRMSEERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSAGDLITVTKPAATELEPVEPLVVYVTRVEPNAETPIRATEAKGVRVETTDELIVAA
Ga0207661_101884133	3300025944	Corn Rhizosphere	MSEERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITVTRPTATDLDPVESFLVYVTRVEPNADTPIRATEAKGVRVETTDELIVAA
Ga0207668_109581202	3300025972	Switchgrass Rhizosphere	TLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITITKPAATELDAIEPLLVYVTRVEPNADTPIRVTEAKGVRVETTDELIVAA
Ga0268266_105844864	3300028379	Switchgrass Rhizosphere	MSDERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITITKPAATELDPIEPLLVYVTRVEPNADTPIRVTEAK
Ga0268264_111384752	3300028381	Switchgrass Rhizosphere	RTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITITKPAATELDPIEPLLVYVTRVEPNADTPIRVTEAKGVRVETTDELIVAA
Ga0247822_103388431	3300028592	Soil	YFEVGAYRYTAEWLPSVGDLITITKPAATELDPIEPLLVYVTRVEPNADTPIRVTEAKGVRVETTDELIVAA
Ga0247824_103127771	3300028809	Soil	TLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITITKPAATELDPVERFLVYVTRVEPNADTPIRVTEAKGVRVETTDELIVAA
Ga0247825_100948831	3300028812	Soil	GLPYFEVGAYRYTAEWLPSVGDLITITKPAATELDAIEPLLVYVTRVEPNADTPIRVTEAKGVRVETTDELIVAA
Ga0247826_102105371	3300030336	Soil	TFPVTLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITITKPAATELDPIEPLLVYVTRVEPNADTPIRVTEAKGVRVETTDELIVAA
Ga0307505_105732362	3300031455	Soil	VRVPPLRLSSVGRMSDERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPRAGDLITITKAAATELESAEPLLVYVTRVEPNADTPIRVTEAKGVRLDAADEFIVAA
Ga0310887_101285122	3300031547	Soil	MSEERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITITKPAATELDPVERFLVYVTRVEPNADTPIRVTEAKGVRVETTDELIVAA
Ga0310893_103510142	3300031892	Soil	MSDERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITITKPAATELDPVERFLVYVTRVEPNADTPIRVT
Ga0310906_101708461	3300032013	Soil	PGLPYFEVGAYRYTAEWLPSVGDLITITKPAATELDPIEPLLVYVTRVEPNADTPIRVTEAKGVRVETTDELIVAA
Ga0310895_100380761	3300032122	Soil	PSVRIMSDERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITITKPAATELDAIEPLLVYVTRVEPNADTPIRVTEAKGVRVETTDELIVAA
Ga0310896_100379861	3300032211	Soil	PRSCRPSVRIMSDERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITITKPAATELDPIEPLLVYVTRVEPNADTPIRVTEAKGVRVETTDELIVAA
Ga0310810_102425633	3300033412	Soil	SRLFSVRTMSEERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSAGDLITVTKPAATELDPVEPLLVYVTRVEPNADTPIRATEAKGLSVETTDELIVAA
Ga0247829_114522851	3300033550	Soil	AGPGLPYFEVGAYRYTAEWLPSVGDLITITKPAATELDAIEPLLVYVTRVEPNADTPIRVTEAKGVRVETTDELIVAA
Ga0247830_101165983	3300033551	Soil	RSCRPSVRIMSDERTFPVTLMRAGPGLPYFEVGAYRYTAEWLPSVGDLITITKPAATELDPIEPLLVYVTRVEPNADTPIRVTEAKGVRVETTDELIVAA

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085672

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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