Metagenome / Metatranscriptome Family F085712

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085712
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	59 residues
Representative Sequence	MVEENGTYFVGMSFETEDDEEIVFPVMFHTKNYKEALTLTRCIAAGDPRKRVMFADIDEEF
Number of Associated Samples	91
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.90 %
% of genes near scaffold ends (potentially truncated)	26.13 %
% of genes from short scaffolds (< 2000 bps)	66.67 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (43.243 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (16.216 % of family members)
Environment Ontology (ENVO)	Unclassified (45.045 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (48.649 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.48% β-sheet: 24.72% Coil/Unstructured: 61.80%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF06067	DUF932	28.83
PF00565	SNase	14.41
PF07486	Hydrolase_2	2.70
PF01653	DNA_ligase_aden	2.70
PF12705	PDDEXK_1	2.70
PF02562	PhoH	1.80
PF13692	Glyco_trans_1_4	1.80
PF01370	Epimerase	1.80
PF00268	Ribonuc_red_sm	0.90
PF08544	GHMP_kinases_C	0.90
PF13578	Methyltransf_24	0.90
PF13580	SIS_2	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0272	NAD-dependent DNA ligase	Replication, recombination and repair [L]	2.70
COG3773	Cell wall hydrolase CwlJ, involved in spore germination	Cell cycle control, cell division, chromosome partitioning [D]	2.70
COG1702	Phosphate starvation-inducible protein PhoH, predicted ATPase	Signal transduction mechanisms [T]	1.80
COG1875	Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domains	General function prediction only [R]	1.80
COG0208	Ribonucleotide reductase beta subunit, ferritin-like domain	Nucleotide transport and metabolism [F]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.76 %
Unclassified	root	N/A	43.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.24 %
Viruses	superkingdom	All Organisms → Viruses	37.84 %
cellular organisms	root	All Organisms → cellular organisms	18.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.24 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	35.14 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	18.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.24 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	35.14 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.24 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	35.14 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.60 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.24 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	35.14 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.60 %
Cellvibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	2.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.24 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	30.63 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.60 %
Porticoccaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae	2.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.80 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.24 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	30.63 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.60 %
unclassified Porticoccaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae	2.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.80 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.24 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	30.63 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.60 %
Porticoccaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium	2.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.80 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001266\|B570J13884_101266	Not Available	1942	Open in IMG/M
3300002408\|B570J29032_109292884	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300002835\|B570J40625_100194207	All Organisms → cellular organisms → Bacteria	2213	Open in IMG/M
3300002835\|B570J40625_100735448	All Organisms → cellular organisms → Bacteria → Proteobacteria	877	Open in IMG/M
3300002835\|B570J40625_100839586	All Organisms → cellular organisms → Bacteria → Proteobacteria	802	Open in IMG/M
3300003490\|JGI25926J51410_1010144	All Organisms → cellular organisms → Bacteria → Proteobacteria	1951	Open in IMG/M
3300004124\|Ga0066178_10017680	All Organisms → cellular organisms → Bacteria	1599	Open in IMG/M
3300004125\|Ga0066182_10119581	Not Available	640	Open in IMG/M
3300004790\|Ga0007758_11123575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1157	Open in IMG/M
3300005527\|Ga0068876_10001826	Not Available	16213	Open in IMG/M
3300005527\|Ga0068876_10025143	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3736	Open in IMG/M
3300005527\|Ga0068876_10297522	Not Available	917	Open in IMG/M
3300005528\|Ga0068872_10198502	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1146	Open in IMG/M
3300005581\|Ga0049081_10061272	All Organisms → cellular organisms → Bacteria → Proteobacteria	1417	Open in IMG/M
3300005581\|Ga0049081_10206606	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300005581\|Ga0049081_10207971	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300005584\|Ga0049082_10149221	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300005662\|Ga0078894_10531185	Not Available	1053	Open in IMG/M
3300006484\|Ga0070744_10006925	All Organisms → Viruses	3398	Open in IMG/M
3300006484\|Ga0070744_10077333	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	965	Open in IMG/M
3300006639\|Ga0079301_1000173	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	30840	Open in IMG/M
3300006639\|Ga0079301_1023790	Not Available	2112	Open in IMG/M
3300007162\|Ga0079300_10003706	Not Available	6019	Open in IMG/M
3300007546\|Ga0102874_1012813	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2760	Open in IMG/M
3300007547\|Ga0102875_1001397	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	8535	Open in IMG/M
3300007559\|Ga0102828_1073593	Not Available	813	Open in IMG/M
3300007560\|Ga0102913_1199819	Not Available	642	Open in IMG/M
3300007606\|Ga0102923_1124230	Not Available	809	Open in IMG/M
3300007624\|Ga0102878_1108253	Not Available	821	Open in IMG/M
3300007629\|Ga0102895_1052480	Not Available	1046	Open in IMG/M
3300007973\|Ga0105746_1089147	Not Available	1004	Open in IMG/M
3300008021\|Ga0102922_1007065	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3037	Open in IMG/M
3300008052\|Ga0102893_1000957	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	10408	Open in IMG/M
3300008055\|Ga0108970_10244001	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1391	Open in IMG/M
3300008107\|Ga0114340_1149722	Not Available	861	Open in IMG/M
3300008113\|Ga0114346_1000031	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	106898	Open in IMG/M
3300008120\|Ga0114355_1237478	Not Available	547	Open in IMG/M
3300008266\|Ga0114363_1138864	Not Available	820	Open in IMG/M
3300009059\|Ga0102830_1228955	Not Available	543	Open in IMG/M
3300009068\|Ga0114973_10000662	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	25955	Open in IMG/M
3300009079\|Ga0102814_10803968	Not Available	520	Open in IMG/M
3300009152\|Ga0114980_10441633	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	744	Open in IMG/M
3300009158\|Ga0114977_10609992	Not Available	588	Open in IMG/M
3300009163\|Ga0114970_10005241	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9371	Open in IMG/M
3300009163\|Ga0114970_10174308	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1279	Open in IMG/M
3300010334\|Ga0136644_10689475	Not Available	556	Open in IMG/M
3300010354\|Ga0129333_10097371	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2719	Open in IMG/M
3300010370\|Ga0129336_10232321	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1041	Open in IMG/M
3300010885\|Ga0133913_11726760	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1571	Open in IMG/M
3300011010\|Ga0139557_1014003	Not Available	1532	Open in IMG/M
3300011268\|Ga0151620_1001292	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9630	Open in IMG/M
3300011268\|Ga0151620_1008949	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3614	Open in IMG/M
3300011268\|Ga0151620_1062768	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1207	Open in IMG/M
3300011268\|Ga0151620_1104782	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	889	Open in IMG/M
3300012012\|Ga0153799_1014139	Not Available	1692	Open in IMG/M
3300012665\|Ga0157210_1004195	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3133	Open in IMG/M
3300012665\|Ga0157210_1006650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium	2232	Open in IMG/M
3300012665\|Ga0157210_1035001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	782	Open in IMG/M
3300013005\|Ga0164292_10152489	Not Available	1688	Open in IMG/M
3300013014\|Ga0164295_10082612	All Organisms → cellular organisms → Bacteria	2386	Open in IMG/M
3300017701\|Ga0181364_1031973	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300017778\|Ga0181349_1162251	Not Available	796	Open in IMG/M
3300017784\|Ga0181348_1256609	Not Available	602	Open in IMG/M
3300019784\|Ga0181359_1006117	All Organisms → cellular organisms → Bacteria	3989	Open in IMG/M
3300019784\|Ga0181359_1145367	Not Available	820	Open in IMG/M
3300020160\|Ga0211733_10822812	Not Available	513	Open in IMG/M
3300020515\|Ga0208234_1000372	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	7578	Open in IMG/M
3300020527\|Ga0208232_1016465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1090	Open in IMG/M
3300020530\|Ga0208235_1040813	Not Available	545	Open in IMG/M
3300021960\|Ga0222715_10325302	Not Available	865	Open in IMG/M
3300021961\|Ga0222714_10189458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium	1197	Open in IMG/M
3300021962\|Ga0222713_10095572	Not Available	2140	Open in IMG/M
3300021963\|Ga0222712_10431427	Not Available	794	Open in IMG/M
3300022407\|Ga0181351_1117319	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1004	Open in IMG/M
3300023174\|Ga0214921_10001178	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	45302	Open in IMG/M
3300024348\|Ga0244776_10330776	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1031	Open in IMG/M
3300025585\|Ga0208546_1010129	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2493	Open in IMG/M
3300025635\|Ga0208147_1096074	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	721	Open in IMG/M
3300025848\|Ga0208005_1007592	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3326	Open in IMG/M
3300027114\|Ga0208009_1006312	All Organisms → Viruses → Predicted Viral	3084	Open in IMG/M
3300027149\|Ga0255108_1020900	Not Available	1348	Open in IMG/M
3300027221\|Ga0208557_1024649	Not Available	1097	Open in IMG/M
3300027242\|Ga0208806_1010753	Not Available	1966	Open in IMG/M
3300027247\|Ga0208679_1012410	Not Available	1808	Open in IMG/M
3300027518\|Ga0208787_1004839	Not Available	5146	Open in IMG/M
3300027608\|Ga0208974_1001072	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	10839	Open in IMG/M
3300027608\|Ga0208974_1103157	Not Available	759	Open in IMG/M
3300027631\|Ga0208133_1028447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium	1407	Open in IMG/M
3300027644\|Ga0209356_1023895	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2045	Open in IMG/M
3300027679\|Ga0209769_1077177	Not Available	1095	Open in IMG/M
3300027683\|Ga0209392_1002583	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4962	Open in IMG/M
3300027816\|Ga0209990_10117415	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1280	Open in IMG/M
3300027971\|Ga0209401_1000042	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	91778	Open in IMG/M
3300031758\|Ga0315907_10228235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1551	Open in IMG/M
3300031758\|Ga0315907_10347704	Not Available	1207	Open in IMG/M
3300031787\|Ga0315900_10090195	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3024	Open in IMG/M
3300031787\|Ga0315900_11000166	Not Available	550	Open in IMG/M
3300031857\|Ga0315909_10719025	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	645	Open in IMG/M
3300031857\|Ga0315909_10810903	Not Available	590	Open in IMG/M
3300032050\|Ga0315906_10894827	Not Available	682	Open in IMG/M
3300032116\|Ga0315903_11006587	Not Available	583	Open in IMG/M
3300034013\|Ga0334991_0043382	All Organisms → Viruses → Predicted Viral	2403	Open in IMG/M
3300034019\|Ga0334998_0337356	Not Available	883	Open in IMG/M
3300034020\|Ga0335002_0286746	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300034073\|Ga0310130_0301199	Not Available	511	Open in IMG/M
3300034082\|Ga0335020_0016428	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4291	Open in IMG/M
3300034102\|Ga0335029_0187549	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1384	Open in IMG/M
3300034102\|Ga0335029_0466698	Not Available	742	Open in IMG/M
3300034104\|Ga0335031_0024104	Not Available	4453	Open in IMG/M
3300034108\|Ga0335050_0037412	Not Available	3100	Open in IMG/M
3300034284\|Ga0335013_0454146	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	777	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.10%
Host-Associated	Host-Associated	0.90%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	93.69%
Terrestrial	Environmental → Terrestrial	5.41%
Plants	Host-Associated → Plants	0.90%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	68.47%
Marine	Environmental → Aquatic → Marine	25.23%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	5.41%
Leaf	Host-Associated → Plants → Leaf	0.90%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	28.83%
Lake	Environmental → Aquatic → Freshwater → Lake	23.42%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	13.51%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	7.21%
Lotic	Environmental → Aquatic → Freshwater → Lotic	6.31%
Unclassified	Environmental → Aquatic → Marine → Unclassified	6.31%
Coastal	Environmental → Aquatic → Marine → Coastal	5.41%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	5.41%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.90%
River	Environmental → Aquatic → Freshwater → River	0.90%
Ice	Environmental → Aquatic → Freshwater → Ice	0.90%
Unclassified	Host-Associated → Plants → Leaf → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	23.42%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	22.52%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	13.51%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	7.21%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	6.31%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	6.31%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	6.31%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	5.41%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	5.41%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.90%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.90%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Leaf → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	16.22%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	13.51%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	10.81%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	7.21%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	7.21%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	6.31%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	5.41%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	4.50%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	3.60%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	3.60%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	3.60%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	2.70%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	2.70%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	2.70%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.80%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.80%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.90%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.90%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.90%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater	0.90%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.90%
Fracking Water	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water	0.90%
Estuary	Host-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001266	Freshwater microbial communities from Lake Mendota, WI - 05MAY2010 deep hole epilimnion	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003490	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN	Environmental	Open in IMG/M
3300004124	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SD (version 2)	Environmental	Open in IMG/M
3300004125	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SD (version 2)	Environmental	Open in IMG/M
3300004790	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005528	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005584	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300006639	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_11	Environmental	Open in IMG/M
3300007162	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series HT 2014_7_11	Environmental	Open in IMG/M
3300007546	Estuarine microbial communities from the Columbia River estuary - metaG 1547A-02	Environmental	Open in IMG/M
3300007547	Estuarine microbial communities from the Columbia River estuary - metaG 1547B-02	Environmental	Open in IMG/M
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental	Open in IMG/M
3300007560	Estuarine microbial communities from the Columbia River estuary - metaG 1560A-02	Environmental	Open in IMG/M
3300007606	Estuarine microbial communities from the Columbia River estuary - metaG 1569-02	Environmental	Open in IMG/M
3300007624	Estuarine microbial communities from the Columbia River estuary - metaG 1548A-02	Environmental	Open in IMG/M
3300007629	Estuarine microbial communities from the Columbia River estuary - metaG 1554B-3	Environmental	Open in IMG/M
3300007973	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2um	Environmental	Open in IMG/M
3300008021	Estuarine microbial communities from the Columbia River estuary - metaG 1569A-3	Environmental	Open in IMG/M
3300008052	Estuarine microbial communities from the Columbia River estuary - metaG 1553A-02	Environmental	Open in IMG/M
3300008055	Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393	Host-Associated	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008120	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NA	Environmental	Open in IMG/M
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental	Open in IMG/M
3300009059	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009079	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009163	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG	Environmental	Open in IMG/M
3300010334	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (v2)	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010370	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNA	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011010	Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Surface Ice	Environmental	Open in IMG/M
3300011268	Sub-surface freshwater microbial communities from San Francisco Estuary Delta, California, USA . Combined Assembly of Gp0173482, Gp0175554, Gp0175555	Environmental	Open in IMG/M
3300012012	Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 879 - Top - Depth 1m	Environmental	Open in IMG/M
3300012665	Freshwater microbial communities from Talbot River, Ontario, Canada - S11	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300013014	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES006 metaG	Environmental	Open in IMG/M
3300017701	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.S.N	Environmental	Open in IMG/M
3300017778	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017784	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.N	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020160	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1	Environmental	Open in IMG/M
3300020515	Freshwater microbial communities from Lake Mendota, WI - 27SEP2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020527	Freshwater microbial communities from Lake Mendota, WI - 24AUG2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020530	Freshwater microbial communities from Lake Mendota, WI - 22OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300023174	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300025585	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025635	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025848	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027114	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_16 (SPAdes)	Environmental	Open in IMG/M
3300027149	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Miss_RepA_8h	Environmental	Open in IMG/M
3300027221	Estuarine microbial communities from the Columbia River estuary - metaG 1548A-3 (SPAdes)	Environmental	Open in IMG/M
3300027242	Estuarine microbial communities from the Columbia River estuary - metaG 1554B-02 (SPAdes)	Environmental	Open in IMG/M
3300027247	Estuarine microbial communities from the Columbia River estuary - metaG 1555A-02 (SPAdes)	Environmental	Open in IMG/M
3300027518	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series HT 2014_7_11 (SPAdes)	Environmental	Open in IMG/M
3300027608	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)	Environmental	Open in IMG/M
3300027631	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535 (SPAdes)	Environmental	Open in IMG/M
3300027644	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027679	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.DN (SPAdes)	Environmental	Open in IMG/M
3300027683	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027816	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG (SPAdes)	Environmental	Open in IMG/M
3300027971	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031787	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300034013	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Jun2018-rr0034	Environmental	Open in IMG/M
3300034019	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Sep2014-rr0049	Environmental	Open in IMG/M
3300034020	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2015-rr0055	Environmental	Open in IMG/M
3300034073	Fracking water microbial communities from deep shales in Oklahoma, United States - MC-6-XL	Environmental	Open in IMG/M
3300034082	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034108	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Jun2014-rr0157	Environmental	Open in IMG/M
3300034284	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jul2016-rr0075	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J13884_1012664	3300001266	Freshwater	MVEEHGAYFVGMCIEMDDENIVFPIKFQTKDYKEALILASCIADGDPRKRVMYADIDEDYYEDDDI*
B570J29032_1092928842	3300002408	Freshwater	MVEETGNYFIGMSLEMEDDDIVFPVVFHTKDYREALALTRCITGGDPRKRVMFANIKEGF
B570J40625_1001942071	3300002835	Freshwater	MVEENGTYFVGMSLEIEDDEIIFPVKFHTKNYKEALILTRCITPGDPRKRVMFADINEEF
B570J40625_1007354481	3300002835	Freshwater	GNYFIGMSLEMEDDDIVFPVVFDTKDYREALALTRCITGGDPRKRVMFANIKEGF*
B570J40625_1008395863	3300002835	Freshwater	MSFETEDDDEIVFPVMFHTKNYKEALTLTRCIAAGDPRKRVMFADIDEEF*
JGI25926J51410_10101442	3300003490	Freshwater Lake	MVEENGTYFVGIALEIEDEEIIFPVKFHTKNYKEALTLTRCITNGDPKKRVMFADINERF
Ga0066178_100176803	3300004124	Freshwater Lake	MVENGTYFVGIALEIEDEEIIFPVKFHTKNYKEALTLTRCITNGDPKKRVMFADINERF*
Ga0066182_101195811	3300004125	Freshwater Lake	ENGTYFVGIALEIEDEEIIFPVKFHTKNYKEALTLTRCITNGDPKKRVMFADINERF*
Ga0007758_111235751	3300004790	Freshwater Lake	TYFVGIALEIEDEEIIFPVKFHTKNYKEALTLTRCITNGDPKKRVMFADINERF*
Ga0068876_1000182613	3300005527	Freshwater Lake	MVEENGTYFVGMSFETEDDEEIVFPVMFHTKNYKEALTLTRCIAAGDPRKRVMFADIDEEF*
Ga0068876_100251433	3300005527	Freshwater Lake	MVEENGTYFVGMLLETEDDEDIIFPVKFHTKNYNEALMLTRCITPGDPRKRVMFADIDERF*
Ga0068876_102975223	3300005527	Freshwater Lake	MVEENGTYFVGMSLETEDDEIIFPVRFHTKNYKEALILTRCITSGDPRKRVMFADIDEEF
Ga0068872_101985023	3300005528	Freshwater Lake	MVEQNGVYFVGMMIETEEDEIVFPVKFHTKNYKEALILTSCITEGDPRKRVMFIEMDEEL
Ga0049081_100612723	3300005581	Freshwater Lentic	MVEENGTYFVGMSFETEDDDEIVFPVMFHTKNYKEALTLTRCIAAGDPRKRVMFADIDEEF*
Ga0049081_102066062	3300005581	Freshwater Lentic	MVEENGTYFVGMCFEMEDDEIVFPVMFHTKNYKEALTLTRCITDGDPRKRVMFADIDEDYI*
Ga0049081_102079711	3300005581	Freshwater Lentic	MVEENGTYFVGMSFETEDDDEIVFPVMFHTKNYKEALTLTRCIAGGDPRKRVMFADIDEEF*
Ga0049082_101492213	3300005584	Freshwater Lentic	MVENGTYFVGIALEIEDEEIIFPVKFHTKNYKEALTLTRCITAGDPKKRVMFADINERF*
Ga0078894_105311853	3300005662	Freshwater Lake	MVEENGMYFVGMCLETEDDDVIFPVMFNTKNYKEALILASCIADGDPRKRVMYADINEDYFRE*
Ga0070744_100069251	3300006484	Estuarine	NGTYFVGMSFETEDDDEIVFPVMFHTKNYKEALTLTRCIAAGDPRKRVMFADIDEDYI*
Ga0070744_100773333	3300006484	Estuarine	MIEENGTYFVGMCLETEDEDIIFPVMFHTKNYKKALILASCITDGDPRKRVMYADINESYFRD*
Ga0079301_100017323	3300006639	Deep Subsurface	MVEENGMYFVGMCLETEEDEVVFPVMFHTKNYKEALTLASCIADGDPRKRVMYADISEDYFRD*
Ga0079301_10237903	3300006639	Deep Subsurface	MTEENGTYFVGMSLETEEDEIIFPVKFHTKNYKEALILTRCITSGDPRKRVMFANIDERF
Ga0079300_100037063	3300007162	Deep Subsurface	MVEENGMYFVGMCLETEEDEVVFPVMFHTKNYKEALTLASCIADGDPRKRVMSADISEDYFRD*
Ga0102874_10128135	3300007546	Estuarine	MVEENGTYFVGMSFETEDDDEIFFPVMFHTKNYKEALTLTRCIAAGDPRKRVMFADIDEDYI*
Ga0102875_10013975	3300007547	Estuarine	MVEENGTYFVGMSFETEDDDEIVFPVMFHTKNYKEALTLTRCIAAGDPRKRVMFADIDEDYI*
Ga0102828_10735934	3300007559	Estuarine	MVEENGTYFVGMSFETEDDDEIVFPVMFHTKNYKEALTLTRCIAAGDPRKRVMFADMDEEF*
Ga0102913_11998193	3300007560	Estuarine	NGTYFVGMSFETEDDDEIVFPVMFHTKNYKEALTLTRCIAAGDPRKRVMFADMDEEF*
Ga0102923_11242301	3300007606	Estuarine	MVENGTYFVGIALEIEDEEIIFPVKFHTKNYKEALTLTRCITNGDPKKRGLFADINERR*
Ga0102878_11082533	3300007624	Estuarine	VENGTYFVGIALEIEDEEIIFPVKFHKKNYKEALTLTRCITNGDPKKRVMFADINERF*
Ga0102895_10524804	3300007629	Estuarine	MVEENGTYFVGMSFETEDDDEIVFPVMFHTKNYKEALTLTRCIAAGDPRKRVMFADIDE
Ga0105746_10891472	3300007973	Estuary Water	MVENGTYFVGIALEIEDEEIIFPVKFHTKNYKEALTLTRCITNGDPKKRVMFADINESF*
Ga0102922_10070656	3300008021	Estuarine	MSFETEDDDEIVFPVMFHTKNYKEALTLTRCIAAGDPRKRVMFADIDEDYI*
Ga0102893_100095719	3300008052	Estuarine	MVENGTYFVGIALEIEDEEIIFPVKFHTKNYKEALTLARCITAGDPKKR
Ga0108970_102440011	3300008055	Estuary	MVEENGTYFVGMSLEIEDDEIIFPVKFHTKNYKEALILTRCITPGDPRKRVMFADINEES
Ga0114340_11497222	3300008107	Freshwater, Plankton	MVEENGTYFVGMSFETEENEEIVFPVMFHTKNYKEALTLTRCIAAGDPRKRVMFADIDEEF*
Ga0114346_100003156	3300008113	Freshwater, Plankton	MQEENGTYFVGMLLETEEEEILFPVKFHTKNYNEALRLTRCITPGDPRKRVMFAEIDERF
Ga0114355_12374782	3300008120	Freshwater, Plankton	GTYFVGMSLETEDDEIIFPVRFHTKNYKEALILTRCITSGDPRKRVMFADIDEEF*
Ga0114363_11388641	3300008266	Freshwater, Plankton	MVEENGTYFVGMSFETEDDDEIVFPVMFHTKNYKEALTLTRCITDGDPRKRVMFADIDED
Ga0102830_12289552	3300009059	Estuarine	MVEENGTYFVGMSFETEDDDEIVFPVMFHTKNYKEALTLTLCIAAGDPRKRVMFADIDEDYI*
Ga0114973_1000066214	3300009068	Freshwater Lake	MVEENGMYFVGMCLETEDEDIIFPVMFHTKNYKQALTLASCIADGDPRKRVMYADINEDYFRD*
Ga0102814_108039682	3300009079	Estuarine	MVEENGTYFVGMSFETEDDDEIVFPVMFHTKNYKEALTLTRCIAAGDPRKRVMFADMDEE
Ga0114980_104416331	3300009152	Freshwater Lake	MVEENGMYFVGMCLETEDDDVVFPVMFHTKNYKEALTLASCIADGDPRKRVMYAD
Ga0114977_106099922	3300009158	Freshwater Lake	MVENGTYFVGMAFEMEDDEIIFPVMFHTKNYKEALTLTRCITDGDPRKRVMFADIDERF*
Ga0114970_1000524112	3300009163	Freshwater Lake	TFMVENGTYFVGIALEIEDEEIIFPVKFHTKNYKEALTLTRCITNGDPKKRVMFADINERF*
Ga0114970_101743083	3300009163	Freshwater Lake	TFMVENGTYFVGIALEIEDEEIIFPVKFHTKNYKEALTLTRCITAGDPKKRVMFADINERF*
Ga0136644_106894752	3300010334	Freshwater Lake	MVEENGMYFVGMCLETEEDEVVFPVMFHTKNYKEALTLASCIADGDPRKRVMYADINEDYFRD*
Ga0129333_100973715	3300010354	Freshwater To Marine Saline Gradient	MVEENGTYFVGMLLETEEDEILFPVKFHTKNYNEALMLTRCITSGDPRKRVMFADIDERF
Ga0129336_102323212	3300010370	Freshwater To Marine Saline Gradient	MVEENGTYFVGMLLETEEDEDIIFPVKFHTKNYNEALMLTRCITSGDPRKRVMFADIDERF*
Ga0133913_117267603	3300010885	Freshwater Lake	MIEENGTYFVGMCLETEDEDIIFPVMFHTKNYKKALILASCITDGDPRKRVMYADINEGYFRD*
Ga0139557_10140032	3300011010	Freshwater	MIEENGTYFVGMCLETEDEDIIFPVMFHTKNYKKALMLASCITDGDPRKRVMYADINEGYFRD*
Ga0151620_10012927	3300011268	Freshwater	MQEENGTYFVGMMLETDGEEILFPVKFHTKSYTEALKLTRCITAGDPRKRVMFADIDKLL
Ga0151620_10089493	3300011268	Freshwater	MVEENGTYFVGMSFETEDDDEIVFPVMFHTKNYKEALTLTRCIAAGDPRKRVMFADIDEDF*
Ga0151620_10627682	3300011268	Freshwater	MVEENGMYFVGMCLETEDDDVIFPVMFNTKNYKEALILASCIADGDPRKRVMYADINEDYFRD*
Ga0151620_11047821	3300011268	Freshwater	ENGTYFVGMSFETEDDDEIVFPVMFHTKNYKEALTLTRCIAAGDPRKRVMFADIDEDYI*
Ga0153799_10141392	3300012012	Freshwater	MVEENGTYFVGMCFETEDDDEIVFPVMFHTKNYKEALTLTRCIAGGDPRKRVMFADIDEEF*
Ga0157210_10041954	3300012665	Freshwater	MVEENGMYFVGMCLETEDDDVIFPVMFNTKNYKKALILASCIADGDPRKRVMYADINEDYFRD*
Ga0157210_10066503	3300012665	Freshwater	MVEENGTYFVGMAFETEEDEEIIFPVRFHTKNYNEALRLTRCITSGDPRKRVMFADIDERF*
Ga0157210_10350012	3300012665	Freshwater	MVEENGTYFVGMSFETEENDEIVFPVMFHTKNYKEALTLTRCIAAGDPRKRVMFADIDEEF*
Ga0164292_101524891	3300013005	Freshwater	MVEETGNYFIGMSLEMEDDDIVFPVVFHTKDYREALALTRCITGGDPRKR
Ga0164295_100826122	3300013014	Freshwater	MVEENGTYFVGMLLETEDDEIIFPVSFCTKDYNEALTLTRCITSGDPRKRVMFADISERF
Ga0181364_10319732	3300017701	Freshwater Lake	MVENGTYFVGIALEIEDEEIIFPVKFHTKNYKEALTLTRCITAGDPKKRVMFADMNERF
Ga0181349_11622513	3300017778	Freshwater Lake	NTFMVEENGTYFVGIALEIEDEEIIFPVKFHTKNYKEALTLTRCITNGDPKKRVMFADIDERF
Ga0181348_12566091	3300017784	Freshwater Lake	SVLPIINTFMVEENGTYFVGIALEIEDEEIIFPVKFHTKNYKEALTLTRCITNGDPKKRVMFADINERF
Ga0181359_10061172	3300019784	Freshwater Lake	MVEENGTYFVGMSLETEEDEIIFPVKFYTKNYKEALILTRCITPGDPRKRVMFADINEEF
Ga0181359_11453671	3300019784	Freshwater Lake	MVEENGTYFVGMLLETEDDEIVFPVKFRTKNYNEALILTRCITPGDPRKKVMFAVIDEGF
Ga0211733_108228121	3300020160	Freshwater	MQEENGTYFVGMMLEMDGEEILFPVKFHTKSYTEALRLTRCITTGDPRKRVMFADIDKLL
Ga0208234_100037215	3300020515	Freshwater	MVENGTYFVGMAFEMEDDEIIFPVMFHTKNYKEALTLTRCITDGDPRKRVMFADIDERF
Ga0208232_10164654	3300020527	Freshwater	MVEENGTYFVGMSFETEDDDEIVFPVMFHTKNYKEALTLTRCIAAGDPRKRVMFADIDEE
Ga0208235_10408132	3300020530	Freshwater	YFVGMAFEMEDDEIIFPVMFHTKNYKEALTLTRCITDGDPRKRVMFADIDERF
Ga0222715_103253022	3300021960	Estuarine Water	MVEENGTYFVGMSFETEDDDEIVFPVMFHTKNYKEALTLTRCIAAGDPRKRVMFADIDED
Ga0222714_101894583	3300021961	Estuarine Water	MVEENGTYFVGMSLETEEDEIIFPVKFHTKNYKEALILTRCITPGDPRKRVMFADINEEF
Ga0222713_100955721	3300021962	Estuarine Water	MVEENGMYFVGMCLETEDDDVVFPVMFNTKNYKEALILASCIADGDPRKRVMYADINEDYFRE
Ga0222712_104314273	3300021963	Estuarine Water	MVEENGMYFVGMCLETEDDDVIFPVMFNTKNYKEALILASCIADGDPRKRVMYADINEDYFRE
Ga0181351_11173192	3300022407	Freshwater Lake	MVEENGMYFVGMCLETEDDDVIFPVMFNTKNYKEALILASCIADGDPRKRVMYADINEDYFRD
Ga0214921_1000117881	3300023174	Freshwater	MVEENGTYFVGMSFETEDDDEIVFPVMFHTKNYKEALTLTRCIAAGDPRKRVMFADIDEDYI
Ga0244776_103307763	3300024348	Estuarine	YFVGMAFETEKNEEIVFPVMFRTKNYKEALTLTRCIAAGDPRKRVMFADIDEEF
Ga0208546_10101293	3300025585	Aqueous	MVEENGTYFVGMLLETAEEEILFPVKFHTKNYNEALRLTRCITSGDPRKRVMFADIDERF
Ga0208147_10960743	3300025635	Aqueous	MVEENGTYFVGMLLETAEEEILFPVKFHTKNYNEALRLTRCITSGDPRKRVMFAD
Ga0208005_10075925	3300025848	Aqueous	MTEENGTYFVGMLLETEDDEIIFPVRFHTKNYKEALILTRCITEGDPRKRVMFADIDEEY
Ga0208009_10063125	3300027114	Deep Subsurface	MVEENGMYFVGMCLETEEDEVVFPVMFHTKNYKEALTLASCIADGDPRKRVMYADISEDYFRD
Ga0255108_10209002	3300027149	Freshwater	MVEENGTYFVGIALEIEDEEIIFPVKFHTKNYKEALTLTRCITNGDPKKRVMFADIDERF
Ga0208557_10246491	3300027221	Estuarine	MVEENGTYFVGMSFETEDDDEIVFPVMFHTKNYKEALTLTRCIAAGDPRKRVMFA
Ga0208806_10107531	3300027242	Estuarine	MVEENGTYFVGMSFETEDDDEIVFPVMFHTKNYKEALTLTRCIAAGDPRKRVMFADI
Ga0208679_10124103	3300027247	Estuarine	MVENGTYFVGIALEIEDEEIIFPVKFHTKNYKEALTLTRCITNGDPKKRVMFADINERF
Ga0208787_10048391	3300027518	Deep Subsurface	MVEENGMYFVGMCLETEEDEVVFPVMFHTKNYKEALTLASCIADGDPRKRVM
Ga0208974_10010725	3300027608	Freshwater Lentic	MVEENGTYFVGMCFEMEDEEIIFPVKFHTKNYKEALTLTRCITAGDPKKRVMFADINERF
Ga0208974_11031572	3300027608	Freshwater Lentic	MVEENGTYFVGMSFETEDDDEIVFPVMFHTKNYKEALTLTRCIAGGDPRKRVMFADIDEE
Ga0208133_10284473	3300027631	Estuarine	MIEENGTYFVGMCLETEDEDIIFPVMFHTKNYKKALILASCITDGDPRKRVMYADINESYFRD
Ga0209356_10238953	3300027644	Freshwater Lake	MVEENGTYFVGIALEIEDEEIIFPVKFHTKNYKEALTLTRCIANGDPKKRVMFADINERF
Ga0209769_10771772	3300027679	Freshwater Lake	MVENGTYFVGIALEIEDEEIIFPVKFHTKNYKEALTLTRCITAGDPKKRVMFADINERF
Ga0209392_10025836	3300027683	Freshwater Sediment	MVEEHGAYFVGMCIEMDDENIVFPIKFQTKDYKEALILASCIADGDPRKRVMYADIDEDYYEDDDI
Ga0209990_101174153	3300027816	Freshwater Lake	MVEENGTYFVGMLLETEDDEDIIFPVKFHTKNYNEALMLTRCITPGDPRKRVMFADIDER
Ga0209401_100004232	3300027971	Freshwater Lake	MVEENGMYFVGMCLETEDEDIIFPVMFHTKNYKQALTLASCIADGDPRKRVMYADINEDYFRD
Ga0315907_102282352	3300031758	Freshwater	MTEENGTYFVGMSLETEDDEIIFPVRFHTKNYKEALILTRCITSGDPRKRVMFADIDEEF
Ga0315907_103477045	3300031758	Freshwater	MVEENGTYFVGMSFETEENEEIVFPVMFHTKNYKEALTLTRCIAAGDPRKRVMFADIDEE
Ga0315900_100901954	3300031787	Freshwater	LINKRMVEQNGVYFVGMMIETEEDEIVFPVKFHTKNYKEALILTSCITEGDPRKRVMFIEMDEEL
Ga0315900_110001662	3300031787	Freshwater	MQEENGTYFVGMMLETDGEEILFPVKFHTKSYTEALRLTRCITAGDPRKRVMFADIDERF
Ga0315909_107190252	3300031857	Freshwater	MVEENGTYFVGMLLETEEDEDIIFPVKFHTKNYNEALMLTRCITSGDPRKRVMFADIDER
Ga0315909_108109033	3300031857	Freshwater	GMSLEIEDDEIIFPVKFHTKNYKEALILTRCITPGDPRKRVMFADINEEF
Ga0315906_108948273	3300032050	Freshwater	MVEENGTYFVGMSLEIEDDEIIFPVKFHTKNYKEALILTRCITPGDPRKRVMF
Ga0315903_110065871	3300032116	Freshwater	MVEENGTYFVGMSFETEDDDEIVFPVMFHTKNYKEALTLTRCIAAGDPRKRVMF
Ga0334991_0043382_718_900	3300034013	Freshwater	MVEENGTYFVGMSLETEDDEIIFPVRFHTKNYKEALILTRCITSGDPRKRVMFADIGGEF
Ga0334998_0337356_25_207	3300034019	Freshwater	MAEETGNYFIGMSLEMEDDDIVFPVVFDTKDYREALALTRCITGGDPRKRVMFANIKEGF
Ga0335002_0286746_488_670	3300034020	Freshwater	MAEETGNYFIGMSLEMEDDDIVFPVVFHTKDYREALALTRCITGGDPRKRVMFANIKEGF
Ga0310130_0301199_44_229	3300034073	Fracking Water	MEEENGTYFVGMCLEREDEEILFPVTFHTKNYNEVLTLVQCIAPGDPRRRVMYADTNNLF
Ga0335020_0016428_3847_4029	3300034082	Freshwater	MVEETGNYFIGMSLEMEDDDIVFPVVFDTKDYREALALTRCITGGDPRKRVMFANIKEGF
Ga0335029_0187549_30_212	3300034102	Freshwater	MVEENGTYFVGMAFEMEDDEIVFPVMFHTKNYKEALTLTRCITDGDPRKRVMFADIDERF
Ga0335029_0466698_41_223	3300034102	Freshwater	MVEENGTYFVGMCFEMEDDEIVFPVMFHTKNYKEALTLTRCITDGDPRKRVMFADIDEDF
Ga0335031_0024104_3736_3921	3300034104	Freshwater	MVEENGTYFVGMALETGEDEEIIFPLRFHTKNYNEALRLTRCITSGDPRKRVMFADIDER
Ga0335050_0037412_2945_3100	3300034108	Freshwater	MVEENGTYFVGMCFEMEDDEIVFPVMFHTKNYKEALTLTRCITDGDPRKRVM
Ga0335013_0454146_401_586	3300034284	Freshwater	MVEENGTYFVGMSFETEDDDEIVFPVMFHTKNYKEALTLTRCIVAGDPRKRVMFADIDER

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085712

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences