Metagenome / Metatranscriptome Family F085798

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085798
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	96 residues
Representative Sequence	MLVKFAPTNILTDLKENKKNCLVIVGKEPIQICTIKDDINKSCQKNSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGVIKKEIK
Number of Associated Samples	91
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	97.30 %
% of genes from short scaffolds (< 2000 bps)	93.69 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (57.658 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine (19.820 % of family members)
Environment Ontology (ENVO)	Unclassified (77.477 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (95.495 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.11% β-sheet: 19.15% Coil/Unstructured: 45.74%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF04390	LptE	82.88
PF08264	Anticodon_1	9.01
PF13603	tRNA-synt_1_2	2.70
PF06144	DNA_pol3_delta	0.90
PF01467	CTP_transf_like	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG2980	Outer membrane lipoprotein LptE/RlpB (LPS assembly)	Cell wall/membrane/envelope biogenesis [M]	82.88
COG1466	DNA polymerase III, delta subunit	Replication, recombination and repair [L]	0.90
COG2812	DNA polymerase III, gamma/tau subunits	Replication, recombination and repair [L]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.66 %
Unclassified	root	N/A	42.34 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.66 %
Unclassified	root	N/A	42.34 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.66 %
Unclassified	root	N/A	42.34 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	48.65 %
Unclassified	root	N/A	42.34 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	48.65 %
Unclassified	root	N/A	42.34 %

Name	Rank	Taxonomy	Distribution
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	48.65 %
Unclassified	root	N/A	42.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.34 %
unclassified Nitrosomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales	27.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.34 %
Methylophilales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Methylophilales bacterium	14.41 %
OM43 clade	clade	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade	12.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.34 %
Methylophilales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Methylophilales bacterium	14.41 %
Methylophilales bacterium HTCC2181	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	12.61 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000167\|SI39nov09_120mDRAFT_c1005013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	4675	Open in IMG/M
3300000239\|SI36aug09_120mDRAFT_1079904	Not Available	554	Open in IMG/M
3300000255\|LP_F_10_SI03_135DRAFT_1020449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	1281	Open in IMG/M
3300001344\|JGI20152J14361_10117583	Not Available	507	Open in IMG/M
3300001346\|JGI20151J14362_10064432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Methylophilales bacterium	1474	Open in IMG/M
3300001346\|JGI20151J14362_10143224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	729	Open in IMG/M
3300001346\|JGI20151J14362_10152764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	689	Open in IMG/M
3300001348\|JGI20154J14316_10099426	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300001348\|JGI20154J14316_10126392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Methylophilales bacterium	742	Open in IMG/M
3300001355\|JGI20158J14315_10099849	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300001355\|JGI20158J14315_10197782	Not Available	575	Open in IMG/M
3300003583\|JGI26253J51717_1015515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Methylophilales bacterium	1920	Open in IMG/M
3300003588\|JGI26247J51722_1072098	Not Available	639	Open in IMG/M
3300004277\|Ga0066611_10237909	Not Available	614	Open in IMG/M
3300004278\|Ga0066609_10204310	Not Available	627	Open in IMG/M
3300004280\|Ga0066606_10106843	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300006352\|Ga0075448_10008741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Methylophilales bacterium	3314	Open in IMG/M
3300007280\|Ga0101452_120083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Methylophilales bacterium	3302	Open in IMG/M
3300007637\|Ga0102906_1086126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	878	Open in IMG/M
3300007962\|Ga0102907_1086410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	824	Open in IMG/M
3300008956\|Ga0104261_1027585	Not Available	687	Open in IMG/M
3300008961\|Ga0102887_1052651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Methylophilales bacterium	1338	Open in IMG/M
3300008964\|Ga0102889_1118576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	782	Open in IMG/M
3300009074\|Ga0115549_1136990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	801	Open in IMG/M
3300009077\|Ga0115552_1280116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	668	Open in IMG/M
3300009172\|Ga0114995_10821866	Not Available	509	Open in IMG/M
3300009420\|Ga0114994_10956752	Not Available	554	Open in IMG/M
3300009436\|Ga0115008_10292488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1156	Open in IMG/M
3300009438\|Ga0115559_1071967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Methylophilales bacterium	1411	Open in IMG/M
3300009447\|Ga0115560_1100630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Methylophilales bacterium	1189	Open in IMG/M
3300009447\|Ga0115560_1286103	Not Available	629	Open in IMG/M
3300009467\|Ga0115565_10574566	Not Available	504	Open in IMG/M
3300009495\|Ga0115571_1196007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	828	Open in IMG/M
3300009495\|Ga0115571_1262658	Not Available	692	Open in IMG/M
3300009496\|Ga0115570_10196528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	914	Open in IMG/M
3300009505\|Ga0115564_10213052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Methylophilales bacterium	1000	Open in IMG/M
3300009508\|Ga0115567_10451269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	787	Open in IMG/M
3300009512\|Ga0115003_10432682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	772	Open in IMG/M
3300009785\|Ga0115001_10923091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	524	Open in IMG/M
3300012524\|Ga0129331_1396860	Not Available	615	Open in IMG/M
3300012969\|Ga0129332_1487307	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300017729\|Ga0181396_1065537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	728	Open in IMG/M
3300017741\|Ga0181421_1113298	Not Available	704	Open in IMG/M
3300017749\|Ga0181392_1051809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	1261	Open in IMG/M
3300017781\|Ga0181423_1368778	Not Available	521	Open in IMG/M
3300020165\|Ga0206125_10063326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	1715	Open in IMG/M
3300020169\|Ga0206127_1216981	Not Available	682	Open in IMG/M
3300020169\|Ga0206127_1294347	Not Available	542	Open in IMG/M
3300020182\|Ga0206129_10244267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	759	Open in IMG/M
3300020185\|Ga0206131_10162625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	1150	Open in IMG/M
3300020185\|Ga0206131_10365638	Not Available	616	Open in IMG/M
3300020187\|Ga0206130_10241200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	827	Open in IMG/M
3300020335\|Ga0211690_1135970	Not Available	515	Open in IMG/M
3300020358\|Ga0211689_1167384	Not Available	606	Open in IMG/M
3300020358\|Ga0211689_1222872	Not Available	507	Open in IMG/M
3300020396\|Ga0211687_10198831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	813	Open in IMG/M
3300020396\|Ga0211687_10238832	Not Available	727	Open in IMG/M
3300020396\|Ga0211687_10395702	Not Available	531	Open in IMG/M
3300021085\|Ga0206677_10241888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	750	Open in IMG/M
3300021185\|Ga0206682_10102433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	1418	Open in IMG/M
3300021365\|Ga0206123_10388026	Not Available	577	Open in IMG/M
3300021378\|Ga0213861_10211923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	1048	Open in IMG/M
3300021389\|Ga0213868_10191602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	1233	Open in IMG/M
3300021957\|Ga0222717_10604853	Not Available	574	Open in IMG/M
3300021957\|Ga0222717_10647568	Not Available	547	Open in IMG/M
(restricted) 3300022920\|Ga0233426_10328902	Not Available	585	Open in IMG/M
3300024236\|Ga0228655_1048708	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300024244\|Ga0228678_1090933	Not Available	590	Open in IMG/M
3300024250\|Ga0228677_1101185	Not Available	566	Open in IMG/M
3300024266\|Ga0228661_1116317	Not Available	503	Open in IMG/M
3300024314\|Ga0228657_1043717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Methylophilales bacterium	983	Open in IMG/M
3300024314\|Ga0228657_1081314	Not Available	663	Open in IMG/M
3300024320\|Ga0233398_1050339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Methylophilales bacterium	1078	Open in IMG/M
3300025620\|Ga0209405_1164205	Not Available	559	Open in IMG/M
3300025637\|Ga0209197_1069452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	1126	Open in IMG/M
3300025640\|Ga0209198_1196007	Not Available	517	Open in IMG/M
3300025656\|Ga0209054_1014153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Methylophilales bacterium	2851	Open in IMG/M
3300025663\|Ga0209775_1196767	Not Available	548	Open in IMG/M
3300025665\|Ga0209360_1194714	Not Available	532	Open in IMG/M
3300025680\|Ga0209306_1126873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	739	Open in IMG/M
3300025688\|Ga0209140_1195617	Not Available	568	Open in IMG/M
3300025699\|Ga0209715_1119759	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300025704\|Ga0209602_1220055	Not Available	549	Open in IMG/M
3300025770\|Ga0209362_1046737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Methylophilales bacterium	1847	Open in IMG/M
3300025809\|Ga0209199_1275944	Not Available	535	Open in IMG/M
3300025860\|Ga0209119_1095152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Methylophilales bacterium	1336	Open in IMG/M
3300025874\|Ga0209533_1189409	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300025880\|Ga0209534_10101481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Methylophilales bacterium	1636	Open in IMG/M
3300025880\|Ga0209534_10175827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Methylophilales bacterium	1099	Open in IMG/M
3300025880\|Ga0209534_10223305	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300025880\|Ga0209534_10287540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	764	Open in IMG/M
3300025890\|Ga0209631_10220962	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300025890\|Ga0209631_10283511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	810	Open in IMG/M
3300025890\|Ga0209631_10452430	Not Available	583	Open in IMG/M
3300025892\|Ga0209630_10085958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	1738	Open in IMG/M
3300025892\|Ga0209630_10200453	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300025892\|Ga0209630_10298058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	734	Open in IMG/M
3300025894\|Ga0209335_10446547	Not Available	508	Open in IMG/M
3300025897\|Ga0209425_10437268	Not Available	618	Open in IMG/M
3300026434\|Ga0247591_1103009	Not Available	526	Open in IMG/M
3300026460\|Ga0247604_1112274	Not Available	609	Open in IMG/M
3300026491\|Ga0228641_1103942	Not Available	609	Open in IMG/M
3300027686\|Ga0209071_1005347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	4398	Open in IMG/M
3300027687\|Ga0209710_1021740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	3338	Open in IMG/M
3300028008\|Ga0228674_1111956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	942	Open in IMG/M
3300028396\|Ga0228643_1081134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	773	Open in IMG/M
3300031773\|Ga0315332_10526208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	743	Open in IMG/M
3300031774\|Ga0315331_10719237	Not Available	704	Open in IMG/M
3300031851\|Ga0315320_10776290	Not Available	605	Open in IMG/M
3300032011\|Ga0315316_10419431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181	1124	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Pelagic	Environmental → Aquatic → Marine → Pelagic	23.42%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	19.82%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	17.12%
Coastal	Environmental → Aquatic → Marine → Coastal	15.32%
Unclassified	Environmental → Aquatic → Marine → Unclassified	12.61%
Oceanic	Environmental → Aquatic → Marine → Oceanic	7.21%
Strait	Environmental → Aquatic → Marine → Strait	3.60%
Inlet	Environmental → Aquatic → Marine → Inlet	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	23.42%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	19.82%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	15.32%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	12.61%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	12.61%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	6.31%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	4.50%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	3.60%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	0.90%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	19.82%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	16.22%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	12.61%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	10.81%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	7.21%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	7.21%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	5.41%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	5.41%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	4.50%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	3.60%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.80%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.80%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	0.90%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.90%
Marine Surface Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water	0.90%
Ocean Water	Environmental → Aquatic → Marine → Oceanic → Unclassified → Ocean Water	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000167	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 39 11/10/09 120m	Environmental	Open in IMG/M
3300000239	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 36 08/11/09 120m	Environmental	Open in IMG/M
3300000255	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_F_10_SI03_135	Environmental	Open in IMG/M
3300001344	Pelagic Microbial community sample from North Sea - COGITO 998_met_02	Environmental	Open in IMG/M
3300001346	Pelagic Microbial community sample from North Sea - COGITO 998_met_01	Environmental	Open in IMG/M
3300001348	Pelagic Microbial community sample from North Sea - COGITO 998_met_04	Environmental	Open in IMG/M
3300001355	Pelagic Microbial community sample from North Sea - COGITO 998_met_08	Environmental	Open in IMG/M
3300003583	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_100m_DNA	Environmental	Open in IMG/M
3300003588	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_100m_DNA	Environmental	Open in IMG/M
3300004277	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_200m	Environmental	Open in IMG/M
3300004278	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_150m	Environmental	Open in IMG/M
3300004280	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_100m	Environmental	Open in IMG/M
3300006352	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNA	Environmental	Open in IMG/M
3300007280	Marine coastal surface water microbial communities in Port Hacking, Sydney, Australia ? TJ18 time point	Environmental	Open in IMG/M
3300007637	Estuarine microbial communities from the Columbia River estuary - metaG 1556A-02	Environmental	Open in IMG/M
3300007962	Estuarine microbial communities from the Columbia River estuary - metaG 1556B-02	Environmental	Open in IMG/M
3300008956	Marine microbial communities from eastern North Pacific Ocean - P8 free-living McLane	Environmental	Open in IMG/M
3300008961	Estuarine microbial communities from the Columbia River estuary - metaG 1550B-02	Environmental	Open in IMG/M
3300008964	Estuarine microbial communities from the Columbia River estuary - metaG 1551A-02	Environmental	Open in IMG/M
3300009074	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430	Environmental	Open in IMG/M
3300009077	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328	Environmental	Open in IMG/M
3300009172	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154	Environmental	Open in IMG/M
3300009420	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152	Environmental	Open in IMG/M
3300009436	Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome	Environmental	Open in IMG/M
3300009438	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506	Environmental	Open in IMG/M
3300009447	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509	Environmental	Open in IMG/M
3300009467	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530	Environmental	Open in IMG/M
3300009495	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531	Environmental	Open in IMG/M
3300009496	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524	Environmental	Open in IMG/M
3300009505	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523	Environmental	Open in IMG/M
3300009508	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412	Environmental	Open in IMG/M
3300009512	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88	Environmental	Open in IMG/M
3300009785	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130	Environmental	Open in IMG/M
3300012524	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012969	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017729	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 19 SPOT_SRF_2011-01-11	Environmental	Open in IMG/M
3300017741	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19	Environmental	Open in IMG/M
3300017749	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15	Environmental	Open in IMG/M
3300017781	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14	Environmental	Open in IMG/M
3300020165	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1	Environmental	Open in IMG/M
3300020169	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160419_1	Environmental	Open in IMG/M
3300020182	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160502_2	Environmental	Open in IMG/M
3300020185	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1	Environmental	Open in IMG/M
3300020187	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160512_1	Environmental	Open in IMG/M
3300020335	Marine microbial communities from Tara Oceans - TARA_B100000768 (ERX556030-ERR599035)	Environmental	Open in IMG/M
3300020358	Marine microbial communities from Tara Oceans - TARA_B100000768 (ERX555925-ERR599009)	Environmental	Open in IMG/M
3300020396	Marine microbial communities from Tara Oceans - TARA_B100000767 (ERX555915-ERR599122)	Environmental	Open in IMG/M
3300021085	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015	Environmental	Open in IMG/M
3300021185	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015	Environmental	Open in IMG/M
3300021365	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1	Environmental	Open in IMG/M
3300021378	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131	Environmental	Open in IMG/M
3300021389	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300022920 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_10_MG	Environmental	Open in IMG/M
3300024236	Seawater microbial communities from Monterey Bay, California, United States - 67D	Environmental	Open in IMG/M
3300024244	Seawater microbial communities from Monterey Bay, California, United States - 125D_r	Environmental	Open in IMG/M
3300024250	Seawater microbial communities from Monterey Bay, California, United States - 58D_r	Environmental	Open in IMG/M
3300024266	Seawater microbial communities from Monterey Bay, California, United States - 75D	Environmental	Open in IMG/M
3300024314	Seawater microbial communities from Monterey Bay, California, United States - 70D	Environmental	Open in IMG/M
3300024320	Seawater microbial communities from Monterey Bay, California, United States - 38D	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300025620	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516 (SPAdes)	Environmental	Open in IMG/M
3300025637	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512 (SPAdes)	Environmental	Open in IMG/M
3300025640	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110519 (SPAdes)	Environmental	Open in IMG/M
3300025656	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_200m (SPAdes)	Environmental	Open in IMG/M
3300025663	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_135m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025665	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_130m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025680	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328 (SPAdes)	Environmental	Open in IMG/M
3300025688	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_120m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025699	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503 (SPAdes)	Environmental	Open in IMG/M
3300025704	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524 (SPAdes)	Environmental	Open in IMG/M
3300025770	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_165m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025809	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523 (SPAdes)	Environmental	Open in IMG/M
3300025860	Pelagic Microbial community sample from North Sea - COGITO 998_met_03 (SPAdes)	Environmental	Open in IMG/M
3300025874	Pelagic Microbial community sample from North Sea - COGITO 998_met_04 (SPAdes)	Environmental	Open in IMG/M
3300025880	Pelagic Microbial community sample from North Sea - COGITO 998_met_07 (SPAdes)	Environmental	Open in IMG/M
3300025890	Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes)	Environmental	Open in IMG/M
3300025892	Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes)	Environmental	Open in IMG/M
3300025894	Pelagic Microbial community sample from North Sea - COGITO 998_met_09 (SPAdes)	Environmental	Open in IMG/M
3300025897	Pelagic Microbial community sample from North Sea - COGITO 998_met_05 (SPAdes)	Environmental	Open in IMG/M
3300026434	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 53R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026460	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 85R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026491	Seawater microbial communities from Monterey Bay, California, United States - 52D	Environmental	Open in IMG/M
3300027686	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNA (SPAdes)	Environmental	Open in IMG/M
3300027687	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138 (SPAdes)	Environmental	Open in IMG/M
3300028008	Seawater microbial communities from Monterey Bay, California, United States - 1D_r	Environmental	Open in IMG/M
3300028396	Seawater microbial communities from Monterey Bay, California, United States - 55D	Environmental	Open in IMG/M
3300031773	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 34915	Environmental	Open in IMG/M
3300031774	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915	Environmental	Open in IMG/M
3300031851	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515	Environmental	Open in IMG/M
3300032011	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
SI39nov09_120mDRAFT_10050133	3300000167	Marine	MLVKFAPTNILTDLKENKKNCLVIVGKEPIQIGTIKDDINKSCQKNSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVIKC*
SI36aug09_120mDRAFT_10799042	3300000239	Marine	MLVKFAPTNILTDLKENKKNCLVIVGKEPIQIGTIKDDINKSCQKNSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEF
LP_F_10_SI03_135DRAFT_10204491	3300000255	Marine	MLVKFAPTNILTDLKENKKNCLVIVGKEPIQIGTIKDDINKSCQKNSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGVIKKEI
JGI20152J14361_101175831	3300001344	Pelagic Marine	MLVKFAPTNILTDLKENKKNCLVIVGKEPIQICTIKDDINKSCQKNSIDKIPIKVENGIDLNQLDHTFNNQSLFSSQ
JGI20151J14362_100644323	3300001346	Pelagic Marine	MLVKFAPTNILTELKENKKNCLVIAGKEPIQICTIKDDINKSCQINSIEKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGIIKKEIKESILK
JGI20151J14362_101432242	3300001346	Pelagic Marine	MLVKFAPTNILTELKENKTNCLVIAGKEPIQICTIKDDINKSCQINSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGIIKKEIKESILK
JGI20151J14362_101527641	3300001346	Pelagic Marine	MLVKFAPTNILTDLKENKKNCLVIVGKEPIQICTIKDDINKSCQKNSIDKIPIKVENGIDLNQLDHTFNNQSLFSSQI
JGI20154J14316_100994263	3300001348	Pelagic Marine	MLVKFAPKNILSDLKENKKNCLVIIGKEPIQICNIKDDINKSCQNDSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGIIKKEIKE
JGI20154J14316_101263922	3300001348	Pelagic Marine	MLVKFAPTNILSDLKENKKNCLVVVGKEPIQICTVKDDINKSCQNDSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFVVSDGIIKKEIKEYILKKIGEHRQLFYFLF*
JGI20158J14315_100998491	3300001355	Pelagic Marine	MLVKFAPTNILTNLKENKKNCLVIAGKEPIQICTIKDDINKSCQKNSIDKIPIKVENGIDLNQLDHTFNNQSLFSLQRIYEFEVSDGVIKKEIKESILKKIGEHKDS
JGI20158J14315_101977822	3300001355	Pelagic Marine	MLVKFAPTNILSVLKKNKKNCLVIVGKEPIQICTVKDDINKSCQNDSIDKILIKVENGIDLNQLDQTFNNQSLFSSQIIYEFEVSDGNIKKEIKESILKKIGE
JGI26253J51717_10155153	3300003583	Marine	MLVKFAPTNILSDLKENKKNCLVIVGKEPIQILNVKDDINKSCQNDSIDKILIKVENSIDLNQLDHTFNNQSLFSSQIIYEFEVSDGI
JGI26247J51722_10720981	3300003588	Marine	MLVKFAPTNILTELKENKKNCLVIVGKEPIQIGTIKDDINQSCQKNSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYDFEVSDGIIKKEIKESILKKIGEHTDSYFI
Ga0066611_102379092	3300004277	Marine	MLVKFAPTNILTDLKENKKNCLVIVGKEPTQICTIKDDINKSCQKNSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEF
Ga0066609_102043102	3300004278	Marine	MLVKFAPTNILTDLKENKKNCLVIVGKEPTQICTIKDDINKSCQKNSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIY
Ga0066606_101068431	3300004280	Marine	MLVKFAPTNILTELKENKKNCLVIVGKEPIQIGTIKDDINQSCQKNSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYDFEVSDGIIKKEIKESILKKIGEHKDSYFI
Ga0075448_100087413	3300006352	Marine	MKVKFAPTNILSNLQENKKNCLVVVGKEPIQICAVKDDINKSCQNDSIDKIKIKVENDIDLNQLDGTFNNQSLFSSQIIYEFEVSDGIIKKEIKEYILKKIDEHID
Ga0101452_1200835	3300007280	Marine Surface Water	MLVKFAPTNILSNLKENKKNCLVIVGKEPIQICTVKDDINKSCQNDSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGIIKKEIKEYILKKI
Ga0102906_10861261	3300007637	Estuarine	MLVKFAPTNILSDLKENKKNCLVIVGKEPIQILNVKDDINKSCQNDSIDKILIKVENSIDLNQLDHTFNNQSLFSSQIIYEFVISDGIIKKEIKEYILKKIGEHIDSYFI
Ga0102907_10864101	3300007962	Estuarine	MLVKFAPTNILTELKENKKNCLVIVGKEPIQICTIKDDINKSCQKNSIDKIPIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGIIKKEIKEYIFKKIGEHIDS
Ga0104261_10275852	3300008956	Ocean Water	MLVKFAPTNILTELKENKKNCLVIVGKEPIQICTIKDDINKSCQKNSIDKIPIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGIIKKEIKEYILKKIGEHTDSYFV
Ga0102887_10526513	3300008961	Estuarine	MLVKFAPTNILSDLIENKKNCLVIVGKEPIQICTVQDDINKSCQNDSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIY
Ga0102889_11185762	3300008964	Estuarine	MLVKFAPTNILTELKENKKNCLVIVGKEPIQICTVKDDINKSCKNDSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGVIKKEIKESILKKIGEQKD
Ga0115549_11369901	3300009074	Pelagic Marine	MLVKFAPTNILTELKENKKNCLVIVGKEPIQICTIKDDINQFCQKNSIDKILIKVESGIDLNQLDHTFNNQSLFSSQIIYEFE
Ga0115552_12801162	3300009077	Pelagic Marine	MLVKFAPTNILSDLKKNKKNCLVIVGKEPIQICTVKDDINKSCQKNSIDKIPIKVENGIDLNQLDHTFNNQSLFSSQII
Ga0114995_108218662	3300009172	Marine	MIVKFAPTDILSNLKKNKKNCLVIVGKEPIQICAAKDDINNSCQNDSIDKIKIKVENGIDLNQLDHTFNNQSLFSSQIIYELEVSDGIIKNEIKE
Ga0114994_109567522	3300009420	Marine	MIVKFAPTDILSNLKKNKKNCLVIVGKEPIQICAAKDDINNSCQNDSIDKIKIKVENGIDLNQLDHTFNNQSLFSSQIIYELEVSDGIIKKEIKE
Ga0115008_102924881	3300009436	Marine	MLVKFAPTNILTELKENKKNCLVIVGKEPIQICTIKDDINQFCQKNSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGIIKKEIKESILKKI
Ga0115559_10719671	3300009438	Pelagic Marine	MLVKFAPTNILTDLKENKKNCLVIVGKEPIQICTIKDDINKSCQKNSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGVIKKEIKESILKK
Ga0115560_11006303	3300009447	Pelagic Marine	MLVKFAPTNILTDLKENKKNCLVIVGKEPIQICTIKDDINKSCQKNSIDKIPIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGIIKKEIKEYILKKIGEHIDS
Ga0115560_12861032	3300009447	Pelagic Marine	MLVKFAPKNILSDLKENKKNCLVIIGKEPIQICNIKDDINKFCKNDSIEKILIKVENSIDLNQLDQTFNNQSLFSSQIIYEFEVSDGNIKKEIKESILKKIGE
Ga0115565_105745662	3300009467	Pelagic Marine	MLVKFAPTNILTELKENKTNCLVIAGKEPIQICTIKDDINKSCQINSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGIIKKEIKESILKKIGEHKDSCFIF
Ga0115571_11960071	3300009495	Pelagic Marine	MLVKFAPTNILTALKKNKKICLVIVGKEPIQICTVKDDINKSCQNDSIDKILIKVENGIDLNQLDHTFNNQSLFSLQRIYEFEVSDGVIKKEIKESILKKIGE
Ga0115571_12626582	3300009495	Pelagic Marine	MLVKFAPTNILTDLKENKKNCLVIVGKEPIQICTIKDDINKSCQKNSIDKIPIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGIIKKEIK
Ga0115570_101965283	3300009496	Pelagic Marine	MLVKFAPTNILTDLKENKKNCLVIVGKEPIQICTIKDDINKSCQKNSIDKIPIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGVIKKEIKEYILKKISEHTDSYFIF
Ga0115564_102130523	3300009505	Pelagic Marine	MLVKFAPTNILTNLKENKKNCLVIAGKEPIQICTIKDDINKSCQKNSIDKIPIKVENGIDLNQLDHTFNNQSLFSLQRIYEFEVSDGVIKKEIKESILKK
Ga0115567_104512692	3300009508	Pelagic Marine	MLVKFAPTNILTDLKENKKNCLVIVGKEPIQICTVKDDINKSCKNDSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYE
Ga0115003_104326821	3300009512	Marine	MLVKFAPTNILSNLEENKKNCLVVVGKEPVQICAVKDDINKSCHNDSIDKIKIKVENSIDLNQLDHTFNNQSLFSSRIIYEFEVSDGVIKKEI
Ga0115001_109230911	3300009785	Marine	MLVKFAPTKILSNLQENKKNCLVVVGKEPIQISAVKDDINKSCQNDSIDKIQIKFENGIDLNQLDHTFNNQSLFSSQIIYELEVSD
Ga0129331_13968601	3300012524	Aqueous	MLVKFAPTNILTDLKENKKNCLVIVGKEPIQICTVKDDINKFCQNDSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDG
Ga0129332_14873071	3300012969	Aqueous	MLVKFAPTNILTDLKENKKNCLVIVGKEPIQICTVKDDINKSCKNDSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGVIKK
Ga0181396_10655371	3300017729	Seawater	MLVKFAPTNILSALKENKKNCLVVVGKEPIQICTVKDDINKSCQKNSIDKISIKVENGIDLNQLDHTFNNQSLFSSQIIY
Ga0181421_11132981	3300017741	Seawater	MLVKFAPTNILTELKENKTNCLIIAGKEPIQICTIKDDINKSCQINSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGIIKKEIKEYFIKKIGEHIDSYFI
Ga0181392_10518091	3300017749	Seawater	MLVKFAPTNILTELKENKTNCLVIAGKEPIQICTIKDDINKSCQINSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGIIKKEIKESI
Ga0181423_13687782	3300017781	Seawater	MLVKFAPTNILTELKENKTNCLVIAGKEPIQICTIKDDINKSCQINSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVS
Ga0206125_100633261	3300020165	Seawater	MLVKFAPTNILTELKENKKNCLVIVGKEPIQIGTIKDDINQSCQKNSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEV
Ga0206127_12169812	3300020169	Seawater	MLVKFAPTNILTELKENKTNCLVIAGKEPIQICTIKDDINKSCQINSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGIIKKEIKESILKKIGEHKD
Ga0206127_12943472	3300020169	Seawater	MLVKFAPTNILTDLKENKKNCLVIVGKEPIQICTIKDDINKSCQKNSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGVIKKEIKESILKKIGEHK
Ga0206129_102442671	3300020182	Seawater	MLVKFAPTNILTDLKENKKNCLVIVGKEPIQICTIKDDINKSCQKNSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGVIKKEIKESILKKIGEHKDSYFIFY
Ga0206131_101626253	3300020185	Seawater	MLVKFAPTNILTELKENKTNCLVIAGKEPIQICTIKDDINKSCQINSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGII
Ga0206131_103656381	3300020185	Seawater	MLVKFAPTNILTELKENKKNCLVIVGKEPIQIGTIKDDINQSCQKNSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYDFEVSDGIIKKEI
Ga0206130_102412001	3300020187	Seawater	MLVKFAPTNILTDLKENKKNCLVIVGKEPIQICTIKDDINKSCQKNSIDKIPIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGVIKK
Ga0211690_11359701	3300020335	Marine	MLVKFAPTNILSYLKENKKNCLVVVGKEPIQICSVKDDINKSIQNNSIDKIQIKIENDIDLNKFDHMFNNQSLFSSQIIYEFEI
Ga0211689_11673841	3300020358	Marine	MIVKFAPTNILLNLQQNKKNCLVIVGNEPIKIRAVKDDINKSCQNDSIDKIKIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGIIKKEIKENILKKIDEHKDSYFIFY
Ga0211689_12228722	3300020358	Marine	MIVKFAPTDILSNLKKNKKNCLVVVGKEPIQICAIKDDINKSCQNDSIDKIQIKVENGIDLNEVDHTFNNQSLFSSRIIYEFEVSDGIIKKEIKESILKKIDEHKDSYFIFYF
Ga0211687_101988312	3300020396	Marine	MLVKFAPTKILSNLQENKKNCLVVVGKEPIQISAVKDDINKSIQNDSIGKIQIKVENGIDLNQLDHTFNNQSLFSSQIIYELEVSDGIIKKEIKESILKKIDEHKDS
Ga0211687_102388322	3300020396	Marine	MIVKFAPTDILSNLKKNKKNCLVIVGKEPIQICAARDDINNSCQNDSIDKIKIKVENDIDLNQLDHTFNNQSLFSSQILYEFEVSDGIIKKEIKESILKKIDEHKDS
Ga0211687_103957022	3300020396	Marine	MLAKFAPANIISNLQKNKKSCLVVVGKEPIQICAVKDDINKSCQVDSIDKIRIKVENSIDLNQLDHTFNNQSLFSSQIIYEFEVSDGIIKKEIKESILK
Ga0206677_102418882	3300021085	Seawater	MLLKFAPTNILKNLEENKKNCLVVVGKEPVQICAVKDDINKSCRNNSIDKIKIKVENSIDLNQLDHTFNNQSLFSSQIIYEFEVSDGVIKKEIKE
Ga0206682_101024331	3300021185	Seawater	MLVKFAPTNILTDLKGNKKNCLVIVGKEPIQVCTIKEDINKSCQKNSIEKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGAIK
Ga0206123_103880261	3300021365	Seawater	MLVKFAPTNILSDLKENKKNCLVIVGKEPIQICTVKDDINKSCQNDSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFVVSDGIIKKEIKESIL
Ga0213861_102119233	3300021378	Seawater	MLVKFASKNILTDLKENKKNCLVIVGNEPIQICTVKDDINKSCQNDSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGIIKKEIKEYILKRIG
Ga0213868_101916021	3300021389	Seawater	MLVKFAPTNILTDLKENKKNCLVIVGKEPIQICTIKDDINKSCQKNSIDKIPIKVENGINLNQLDHTFNNQSLFSSQIIYEFEVSDGVIKKEIKEYILKKISEH
Ga0222717_106048532	3300021957	Estuarine Water	MLVKFAPTNILSVLRENKKNCLVIVGKEPIQICTIKDDINKSCQKNSIDKIPIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGVIKKEIKESILKKIGEHIDSYFI
Ga0222717_106475681	3300021957	Estuarine Water	MLVKFAPTNILTDLKENKKNCLVIVGKEPIQICTIKDDINKSCQKNSIDKIPIKVENGIDLNQLDHTFNNQSLFSSQIIYEFE
(restricted) Ga0233426_103289022	3300022920	Seawater	MLVKFAPTNILTDLKENKKNCLVIVGKEPIQICTVKDDINKSCKNDSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYELEVSDGIIKKEIKEYILKKI
Ga0228655_10487081	3300024236	Seawater	MLVKFAPTNILSDLKENKKNCLVIVGKEPIQICTVKDDINKSCQNDSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFMVS
Ga0228678_10909332	3300024244	Seawater	MLVKFAPTNILTELKENKKNCLVIAGKEPIQICTIKDDINKSCQINSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGVIKKEIKESILKKIGEYKDSYF
Ga0228677_11011852	3300024250	Seawater	MLVKFAPTNILTDLKENKKNCLVIVGKEPIQICTIKDDINKSCQKNSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGIIKKEIKEYILKKISEHIDSYFI
Ga0228661_11163171	3300024266	Seawater	MLVKFAPTNILSDLKENKKNCLVIVGKEPIQICTVKDDINKSCQNDSIDKILIKVENGIDLNQLDQTFNNQSLFSSQIIYEFEVSDGNIKKEIKESVLK
Ga0228657_10437171	3300024314	Seawater	MLVKFAPTNILTDLKENKKNCLVIVGKEPIQICTIKDDINKSCQKNSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGVIKKEIK
Ga0228657_10813142	3300024314	Seawater	MLVKFAPTNILTDLKENKKNCLVIVGKEPIQICTIKDDINKSCQKNSIDKIPIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGVI
Ga0233398_10503393	3300024320	Seawater	MLVKFAPTNILTELKENKTNCLVIAGKEPIQICTIKDDINKSCQINSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGIIKKEIKERILKKIGEHKDSYFIFY
Ga0244776_106012611	3300024348	Estuarine	MLVKFAPTNILTDLKENKKNCLVIVGKEPIQICTIKDDINKSCQKNSIDKILIKVENGIDLNQLDHTFNNQSLFS
Ga0209405_11642051	3300025620	Pelagic Marine	MLVKFAPTNILTDLKENKKNCLVIVGKEPIQICTIKDDINKSCQKNSIDKIPIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVS
Ga0209197_10694521	3300025637	Pelagic Marine	MLVKFAPTNILTELKENKKNCLVIVGKEPIQICTIKDDINQFCQKNSIDKILIKVESGIDLNQLDHTFNNQSLFSSQIIYDFEVSDGIIKKEIKESILKKIGEHTDSYFIFY
Ga0209198_11960072	3300025640	Pelagic Marine	MLVKFAPTNILLNLKESKKNCLVVVGKEPIQICTVKDDINKCCQKNSIDKIPIKVENGIDLNQFDHTFNNQSLFSSQIIYEFEVPD
Ga0209054_10141533	3300025656	Marine	MLVKFAPTNILTELKENKKNCLVIVGKEPIQIGTIKDDINQSCQKNSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFE
Ga0209775_11967672	3300025663	Marine	MLVKFAPTNILTELKENKKNCLVIVGKEPIQIGTIKDDINQSCQKNSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYDFEVSDGIIKKEIKE
Ga0209360_11947142	3300025665	Marine	MLVKFAPTNILTELKENKKNCLVIVGKEPIQIGTIKDDINQSCQKNSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYDFEVS
Ga0209306_11268732	3300025680	Pelagic Marine	MLVKFAPTNILTELKENKKNCLVIVGKEPIQICTIKDDINQSCQKNSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGI
Ga0209140_11956172	3300025688	Marine	MLVKFAPTNILTELKENKKNCLVIVGKEPIQIGTIKDDINKSCQKNSIDKIPIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGVIKKEIKESILKK
Ga0209715_11197591	3300025699	Pelagic Marine	MLVKFAPTNILTELKENKKNCLVIVGKEPIQICTVKDDINKSCQNDSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYELEVSDGIIKKEIKEYILKKIGEHT
Ga0209602_12200552	3300025704	Pelagic Marine	MLVKFAPTNILTDLKENKKNCLVIVGKEPIQICTIKDDINKSCQKNSIDKIPIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGIIKKEIKEYILKKIS
Ga0209362_10467373	3300025770	Marine	MLLKFAPTNILKNLEENKKNCLVVVGKEPVQICAVKDDINKSCRNNSIDKIKIKVENSIDLNQLDHTFNNQSLFSSQIIYEFEVSDGV
Ga0209199_12759441	3300025809	Pelagic Marine	MLVKFAPTNILSDLKKNKKNCLVIVGKEPIQICTVKDDINKSCQENSIDKIPIKVENGIDLNQLEHTLNNQSLFSSQIIYEFEVSDG
Ga0209119_10951523	3300025860	Pelagic Marine	MLVKFAPTNILTDLKENKKNCLVIVGKEPIQICTIKDDINKSCQNDSIDKISIKVENGIDLNQLDHTFNNQSLFSSQIIYDFEVSDG
Ga0209533_11894091	3300025874	Pelagic Marine	MLVKFAPTNILTELKENKTNCLVIAGKEPIQICTIKDDINKSCQINSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGIIKKEI
Ga0209534_101014811	3300025880	Pelagic Marine	MLVKFAPTNILSDLKKNKKNCLVIVGKEPIQICTVKDDINKSCQKNSIDKIPIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGIIKKEIKES
Ga0209534_101758271	3300025880	Pelagic Marine	MLVKFAPTNILSDLKKNKKNCLVIVGKEPIQICTVKDDINKSCQSDSIDKILIKVENGIDLNQLDYTFNNQSLFSSQIIYEFEVSDGIIKKEIKEYILKKIGEHINSYF
Ga0209534_102233053	3300025880	Pelagic Marine	MLVKFAPKNILSDLKENKKNCLVIIGKEPIQICNIKDDINKSCQNDSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYELEVSDGIIKKEIKEY
Ga0209534_102875402	3300025880	Pelagic Marine	MLVKFAPTNILSVLKKNKKNCLVIVGKEPIQICTVKDDINKSCQNDSIDKILIKVENGIDLNQLDQTFNNQSLFSSQIIYEFD
Ga0209631_102209623	3300025890	Pelagic Marine	MLVKFAPTNILTDLRENKKNCLVIVGREPVQICTVKDDINKSCQKNSIDKIPIKVENGIDLNQLDQTFNNQSLFSSQIIYEFEVTDGVIKKEIKESILKKIG
Ga0209631_102835112	3300025890	Pelagic Marine	MLVKFAPTNILLNLKESKKNCLVVVGKEPIQICTVKDDINKCCQKNSIDKIPIKVENGIDLNQFDHTFNNQSLFSSQIIYEFEVPDGIIKKEIKE
Ga0209631_104524301	3300025890	Pelagic Marine	MLVKFAPTNILSDLKENKKNCLVIVGKEPIQICTVKDDINKSCQNDSIDKILIKVENGIDLNQLDHTFNNQSLFSS
Ga0209630_100859583	3300025892	Pelagic Marine	MLVKFAPTNILTELKENKTNCLVIAGKEPIQICTIKDDINKSCQINSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGIIKKEIKESILKKIGEHKDSY
Ga0209630_102004531	3300025892	Pelagic Marine	MLVKFAPTNILTELKENKKNCLVIAGKEPIQICTIKDDINKSCQINSIEKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGIIKKEIKESILKKIGEHKDSY
Ga0209630_102980582	3300025892	Pelagic Marine	MLVKFAPKNILSDLKENKKNCLVIVGKEPIQICTVKDDINKSCQNDSIDKILIKVENGIDLNQLDHKFNNQSLFSSQIIYEF
Ga0209335_104465471	3300025894	Pelagic Marine	MLVKFAPTNILTDLKENKKNCLVIVGKEPIQICTIKDDINKSCQKNSIDKIPIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGIIKKEIKEYIQKKIGEHIDSYFIFY
Ga0209425_104372681	3300025897	Pelagic Marine	MLVKFAPTNILTDLNENKKNCLVIVGKEPIQICTIKDDINKYCQKNSIDKILIKVENGIDLNQFDHTFSNQSLFSSQIIYEFEVSDGVIKKEIKE
Ga0247591_11030092	3300026434	Seawater	MLVKFAPTNILTDLKGNKKNCLVIVGKEPIQVCTIKDDINKSCQKNSIEKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGVIKKEIKESILKKIGEHT
Ga0247604_11122743	3300026460	Seawater	MLVKFAPTNILTDLKENKKNCLVIVGKEPIQIGTIKDDINQSCQKNSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDG
Ga0228641_11039422	3300026491	Seawater	MLVKFAPTNILTELKENKTNCLVIAGKEPIQICTIKDDINKSCQINSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGIIKKEIKESILKKIG
Ga0209071_10053471	3300027686	Marine	MKVKFAPTNILSNLQENKKNCLVVVGKEPIQICAVKDDINKSCQNDSIDKIKIKVENDIDLNQLDGTFNNQSLFSSQIIYEFEVSDGIIKKEIKEYILKKIDEHIDS
Ga0209710_10217404	3300027687	Marine	MLVKFAPTKILSNLQENKKNCLVVVGKEPIQISAVKDDINKSCQNDSIDKIQIKVENGIDLNQLDHTFNNQSLFSSQIIYELEVSDGI
Ga0228674_11119563	3300028008	Seawater	MLVKFAPTNILTELKENKTNCLVIAGKEPIQICTIKDDINKSCQINSIDKILIKVENGIDLNQLDHTFNNQSLFSSQI
Ga0228643_10811341	3300028396	Seawater	MLVKFAPTNILTELKENKKNCLVIAGKEPIQICTIKDDINKSCQINSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGIIKKEIKESILKKIGEHKD
Ga0315332_105262082	3300031773	Seawater	MLVKFAPTNILSDLKENKKNCLVIVGKEPIQICTVKDDINKSCQKDSIDKILIKVENVIDLNQLDHTFNNQSLFSSQIIYEFEVSDGI
Ga0315331_107192371	3300031774	Seawater	MLVKFAPTNILSDLKENKKNCLVIVGKEPIQICTVKDDINKSCQNDSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGIIKKEIKEYILKKI
Ga0315320_107762902	3300031851	Seawater	MLVKFAPTNILTDLKENKKNCLVIVGKEPIQICTIKDDINKSCQKNSIDKILIKVENGIDLNQLVHTLNNQSLFSSQIIYEFEVSDGVIKKEIKESILK
Ga0315316_104194313	3300032011	Seawater	MLVKFAPTNILSDLKENKKNCLVIVGKEPIQICTVKDDINKSCQNDSIDKILIKVENGIDLNQLDHTFNNQSLFSSQIIYEFEVSDGIIKKEIKEYILKKIGEHID

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters