Metagenome Family F085886

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085886
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	68 residues
Representative Sequence	MPKFAVGDYVERIGSLVPEYMRSGVIIRVIPNDQGLDLFNEYEVNFGNQVIAIFYETQLRLATKNP
Number of Associated Samples	56
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.15 %
% of genes near scaffold ends (potentially truncated)	17.12 %
% of genes from short scaffolds (< 2000 bps)	85.59 %
Associated GOLD sequencing projects	51
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.685 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (43.243 % of family members)
Environment Ontology (ENVO)	Unclassified (29.730 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (58.559 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 9.57% β-sheet: 26.60% Coil/Unstructured: 63.83%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.76
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.76
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SCOP family	SCOP domain	Representative PDB	TM-score
b.34.4.4: Nitrile hydratase beta chain	d3hhtb_	3hht	0.75946
b.34.4.4: Nitrile hydratase beta chain	d3a8gb_	3a8g	0.74619
b.34.17.1: YccV-like	d5ycqa_	5ycq	0.73667
b.34.13.0: automated matches	d3m9qa_	3m9q	0.7156
b.34.5.4: N-utilization substance G protein NusG, C-terminal domain	d1nppa2	1npp	0.71114

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF00072	Response_reg	6.31
PF01593	Amino_oxidase	1.80
PF07332	Phage_holin_3_6	1.80
PF08241	Methyltransf_11	0.90
PF01555	N6_N4_Mtase	0.90
PF12844	HTH_19	0.90
PF01551	Peptidase_M23	0.90
PF02126	PTE	0.90
PF01527	HTH_Tnp_1	0.90
PF13276	HTH_21	0.90
PF12973	Cupin_7	0.90
PF11181	YflT	0.90
PF13083	KH_4	0.90
PF12704	MacB_PCD	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.90
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.90
COG1735	Predicted metal-dependent hydrolase, phosphotriesterase family	General function prediction only [R]	0.90
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.68 %
Unclassified	root	N/A	15.32 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.68 %
Unclassified	root	N/A	15.32 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.68 %
Unclassified	root	N/A	15.32 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	72.07 %
Unclassified	root	N/A	15.32 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	65.77 %
Unclassified	root	N/A	15.32 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	65.77 %
Unclassified	root	N/A	15.32 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	65.77 %
Unclassified	root	N/A	15.32 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459021\|G14TP7Y02I7RFB	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
2228664022\|INPgaii200_c0918161	All Organisms → cellular organisms → Bacteria → Acidobacteria	669	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101730692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101731054	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1524	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101731320	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2013	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101731995	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_104876066	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	936	Open in IMG/M
3300000559\|F14TC_100266857	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2253	Open in IMG/M
3300004463\|Ga0063356_100362275	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1840	Open in IMG/M
3300004463\|Ga0063356_101575084	All Organisms → cellular organisms → Bacteria → Acidobacteria	976	Open in IMG/M
3300004463\|Ga0063356_103931416	All Organisms → cellular organisms → Bacteria → Acidobacteria	640	Open in IMG/M
3300004643\|Ga0062591_101436307	Not Available	686	Open in IMG/M
3300005294\|Ga0065705_10585138	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	716	Open in IMG/M
3300005295\|Ga0065707_10370975	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	890	Open in IMG/M
3300005295\|Ga0065707_10743937	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300005330\|Ga0070690_101654290	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300005332\|Ga0066388_100599515	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1724	Open in IMG/M
3300005332\|Ga0066388_101263038	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1269	Open in IMG/M
3300005332\|Ga0066388_101988695	All Organisms → cellular organisms → Bacteria → Acidobacteria	1041	Open in IMG/M
3300005332\|Ga0066388_102664270	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	912	Open in IMG/M
3300005332\|Ga0066388_104267918	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300005332\|Ga0066388_106954516	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300005364\|Ga0070673_101267230	Not Available	692	Open in IMG/M
3300005365\|Ga0070688_100605404	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	839	Open in IMG/M
3300005713\|Ga0066905_100001761	All Organisms → cellular organisms → Bacteria → Proteobacteria	7686	Open in IMG/M
3300005764\|Ga0066903_100565917	All Organisms → cellular organisms → Bacteria	1955	Open in IMG/M
3300005764\|Ga0066903_101890447	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1143	Open in IMG/M
3300005764\|Ga0066903_101924597	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1133	Open in IMG/M
3300005764\|Ga0066903_104160544	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	774	Open in IMG/M
3300005764\|Ga0066903_106250985	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300005764\|Ga0066903_107545907	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300005764\|Ga0066903_108523997	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300006049\|Ga0075417_10031240	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2207	Open in IMG/M
3300006049\|Ga0075417_10232026	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	881	Open in IMG/M
3300006049\|Ga0075417_10396166	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300006194\|Ga0075427_10087399	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300006755\|Ga0079222_11451411	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300006844\|Ga0075428_100076840	All Organisms → cellular organisms → Bacteria	3645	Open in IMG/M
3300006844\|Ga0075428_100107183	Not Available	3045	Open in IMG/M
3300006844\|Ga0075428_100216857	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2067	Open in IMG/M
3300006844\|Ga0075428_101288449	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300006844\|Ga0075428_101568797	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300006845\|Ga0075421_100094818	All Organisms → cellular organisms → Bacteria → Acidobacteria	3758	Open in IMG/M
3300006845\|Ga0075421_100135591	Not Available	3083	Open in IMG/M
3300006845\|Ga0075421_100870224	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1031	Open in IMG/M
3300006845\|Ga0075421_101543845	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300006847\|Ga0075431_100826168	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	899	Open in IMG/M
3300006852\|Ga0075433_10803547	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	822	Open in IMG/M
3300006854\|Ga0075425_100209766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2239	Open in IMG/M
3300006854\|Ga0075425_100459803	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1466	Open in IMG/M
3300006854\|Ga0075425_101545993	Not Available	749	Open in IMG/M
3300006871\|Ga0075434_100602896	All Organisms → cellular organisms → Bacteria	1117	Open in IMG/M
3300006871\|Ga0075434_102234908	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300006880\|Ga0075429_100347539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1298	Open in IMG/M
3300006880\|Ga0075429_101526532	Not Available	581	Open in IMG/M
3300006903\|Ga0075426_10196583	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1462	Open in IMG/M
3300006904\|Ga0075424_100185307	Not Available	2208	Open in IMG/M
3300006904\|Ga0075424_101236402	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	795	Open in IMG/M
3300006914\|Ga0075436_100932653	All Organisms → cellular organisms → Bacteria → Acidobacteria	650	Open in IMG/M
3300006914\|Ga0075436_101120073	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300006969\|Ga0075419_11099409	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300006969\|Ga0075419_11321525	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300007004\|Ga0079218_13431069	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300009100\|Ga0075418_12584294	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300009100\|Ga0075418_12805477	Not Available	532	Open in IMG/M
3300009147\|Ga0114129_10119406	Not Available	3631	Open in IMG/M
3300009147\|Ga0114129_10210584	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2628	Open in IMG/M
3300009147\|Ga0114129_10992076	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1058	Open in IMG/M
3300009147\|Ga0114129_12242452	Not Available	656	Open in IMG/M
3300009162\|Ga0075423_10493318	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1288	Open in IMG/M
3300009162\|Ga0075423_10552092	Not Available	1213	Open in IMG/M
3300009162\|Ga0075423_10794180	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1001	Open in IMG/M
3300009162\|Ga0075423_11060320	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	862	Open in IMG/M
3300009162\|Ga0075423_11211746	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	806	Open in IMG/M
3300009162\|Ga0075423_12285036	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300009792\|Ga0126374_11899104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300010043\|Ga0126380_10309906	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1128	Open in IMG/M
3300010046\|Ga0126384_10411012	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1145	Open in IMG/M
3300010046\|Ga0126384_10797773	All Organisms → cellular organisms → Bacteria → Acidobacteria	845	Open in IMG/M
3300010046\|Ga0126384_12005351	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300010358\|Ga0126370_10132789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1785	Open in IMG/M
3300010359\|Ga0126376_11912501	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300010360\|Ga0126372_10606621	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1051	Open in IMG/M
3300010360\|Ga0126372_11007419	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	845	Open in IMG/M
3300010362\|Ga0126377_10735562	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1041	Open in IMG/M
3300010362\|Ga0126377_12021163	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300010376\|Ga0126381_104648006	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300010398\|Ga0126383_12162220	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300010398\|Ga0126383_12861598	Not Available	564	Open in IMG/M
3300012212\|Ga0150985_110314537	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	684	Open in IMG/M
3300012353\|Ga0137367_10409443	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	961	Open in IMG/M
3300012354\|Ga0137366_10463285	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	918	Open in IMG/M
3300012469\|Ga0150984_108231653	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	835	Open in IMG/M
3300012948\|Ga0126375_11630135	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300012971\|Ga0126369_10337268	All Organisms → cellular organisms → Bacteria	1524	Open in IMG/M
3300012971\|Ga0126369_10457527	All Organisms → cellular organisms → Bacteria	1327	Open in IMG/M
3300012971\|Ga0126369_12255822	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300015371\|Ga0132258_13638647	All Organisms → cellular organisms → Bacteria	1053	Open in IMG/M
3300015374\|Ga0132255_104224345	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300016357\|Ga0182032_11575334	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300016404\|Ga0182037_10600991	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	933	Open in IMG/M
3300025921\|Ga0207652_11532170	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300027873\|Ga0209814_10069526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1479	Open in IMG/M
3300027909\|Ga0209382_10182825	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2411	Open in IMG/M
3300027909\|Ga0209382_10353051	Not Available	1647	Open in IMG/M
3300027909\|Ga0209382_11042608	Not Available	849	Open in IMG/M
3300027909\|Ga0209382_11709093	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300027909\|Ga0209382_11778828	Not Available	601	Open in IMG/M
3300031890\|Ga0306925_11085536	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	51.35%
Environmental	Environmental	47.75%
Engineered	Engineered	0.90%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	51.35%
Terrestrial	Environmental → Terrestrial	47.75%
Solid Waste	Engineered → Solid Waste	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere	45.05%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.31%
Grass	Engineered → Solid Waste → Grass	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	43.24%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.53%
Loam	Environmental → Terrestrial → Soil → Loam	16.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.60%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.70%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.80%
Composting	Engineered → Solid Waste → Grass → Composting	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	43.24%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.61%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.60%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.80%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.90%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	43.24%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.22%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	12.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.41%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.70%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.70%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.80%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.90%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.90%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.90%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459021	Litter degradation NP4	Engineered	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4NP_02077980	2170459021	Switchgrass, Maize And Mischanthus Litter	MPRFKVGDHVERIGSLVPEWMRSGVILRVIPNNQGLDLFNEYEVNFGDQVIAIFYETQLRLAAADRT
INPgaii200_09181611	2228664022	Soil	MPKFAVGDHVERIGSLVPEYMRSGVIIRVIPNDQGQDLFNEYEVNFGNRVIAIFYETQLRLVEQS
INPhiseqgaiiFebDRAFT_1017306922	3300000364	Soil	MPKFAVGDHVERIGSLVPEYMRSGVIIRVIPNDQGLDLFNEYEVDFGNQVIAIFYETQLXLXXXS*
INPhiseqgaiiFebDRAFT_1017310542	3300000364	Soil	MPKFAVGDYVERIGSLVPEYMRSGVIXRVIPNDQGQDLFNEYEVNFGNRVIAIFYETQLRLATTDQT*
INPhiseqgaiiFebDRAFT_1017313202	3300000364	Soil	MPKFKVGDHVERIGVLVPEYMRSGVITRVTPNDEGQDLFNEYEVKFGNQVVAILYESQLRLATKANP*
INPhiseqgaiiFebDRAFT_1017319951	3300000364	Soil	VSIQPGIGCAAMPKFKIGDHVERVGGIIPEYMREGIIIRVIPDEHRHDLFNAYEVDFGHQVIAILYESQLRLATKANP*
INPhiseqgaiiFebDRAFT_1048760662	3300000364	Soil	MPRFKVGDRVERIGSLIPEYMRSGVVIRVIPNEHADWFSEYEVNFGNQQIATFYETQLRPANEASDVNP*
F14TC_1002668577	3300000559	Soil	MPKFKVGDHVERIGVLVPEYMRSGVSTRVTPNDEGQDLFNEYEVNFGNQVVAILYESQLRLAS*
Ga0063356_1003622752	3300004463	Arabidopsis Thaliana Rhizosphere	MPKFKVGDRVERIGSLVPIYMKNGEIIRVIPNEHGFAEFTEYEVNFGNRMIGAFYETQLKPADETANPQYRE*
Ga0063356_1015750842	3300004463	Arabidopsis Thaliana Rhizosphere	MPKFKVGDHVERIGTLVPPYMKSGVVTFVILSKEGLAWFNEYEVNFGRTGIATFYETQLQLIKAAHAG*
Ga0063356_1039314162	3300004463	Arabidopsis Thaliana Rhizosphere	MPRFKVGDRVERTGSLVPEYMKTGRVTLVIPNQNGLDWFTEYEVDFGRITARLYETQLRLIDPMKDHSSTL*
Ga0062591_1014363071	3300004643	Soil	MPKFNVGDRVERVGSLIPQYMQIGIITRIILNEDGVEMFTEYEVNFGNHLIALFYETQLRLVNVAAHNN*
Ga0065704_107839441	3300005289	Switchgrass Rhizosphere	GADAAAPSEEGMFGIGVLVPDYMRSGDIVRVIPNKDGLELFTEYEVNFNNQLVATFYETQLRLVKPNKAATFKAAP*
Ga0065705_105851381	3300005294	Switchgrass Rhizosphere	VHFYRNVVREYHRRGMPKFKVGNHVERIGVLVPEYMRSGVVTRVTPNDEGQDLFNEYEVNFGNQVVAILYESQLRLATKANP*
Ga0065707_103709751	3300005295	Switchgrass Rhizosphere	MPKFKVGDHVERIGVLVPEYMRSGVITRVTPNDEGQDLFNEYEVNFGNQVVAILYESQLRLATKANP*
Ga0065707_107439371	3300005295	Switchgrass Rhizosphere	VPKFKVGDRVERIGWLVPEYMRKGIVTGVIPNKQGHDSFNEYEVNFGNQLIMILYQTQLRLAP*SR
Ga0070690_1016542901	3300005330	Switchgrass Rhizosphere	MARFQVGDKVERIGSLVPEYMKHGVVVRIMTNEHSDLFTAYEVSFGSQMIAIFYETQLRPANDSN*
Ga0066388_1005995151	3300005332	Tropical Forest Soil	MPKSAVGDYVERIGSLVLNTCEAVSLRESFRMTRAVDLFNEYEVNFGNQVIAIFYETQLRLVTKANP*
Ga0066388_1012630382	3300005332	Tropical Forest Soil	MPKFKVGDEVERIGSLVPPYMKFGVIVRVIPNKDGPDWSTQYEVNFGNQVKAKFYEMQLRRAEGSSAPV*
Ga0066388_1019886952	3300005332	Tropical Forest Soil	MPKFKVGDRVERIGSLVPEWMRSGVILRVIPNDQRQDLFNEYEVNFGNQVIAIFYETQLRLVDTQD*
Ga0066388_1026642702	3300005332	Tropical Forest Soil	VPKFKVGDRVERIGWLVPEYMRKGIVTGVTLNKQGQDSFNEYEVNFGNQLIMILFETQLRLVTTDPH*
Ga0066388_1042679182	3300005332	Tropical Forest Soil	MPKFNVGDRVERIGSLVPEYMRSGVVTRVIPNPQGQDLFNEYEVNFDNQLIAIFYETQLRLAPKQ*
Ga0066388_1069545161	3300005332	Tropical Forest Soil	MPKFKVGDRVERIGTLVPLYMTTGVIIRVMPNPKMDRFTEYEVDFGGQLIATFYETQLRLAPKASKAHPR*
Ga0070673_1012672301	3300005364	Switchgrass Rhizosphere	MPKFKVGDRVVRIGTLIPEYLREGVITRVIPNKDGLHLFTEYEVELDDKQIAVFYETQLRRAYPSTDRKKG*
Ga0070688_1006054042	3300005365	Switchgrass Rhizosphere	MARFQVGDKVERIGSLVPEYMKHGVVVRIMPNEHSDLFTAYEVSFGSQMIAIFYETQLRPANDSN*
Ga0066905_1000017615	3300005713	Tropical Forest Soil	MPKFKVGDHVERVGSLVPEYMKSGVITRVIPNDQGQDLFNEYEVNFGNQVIAILYERQLRLAPTANP*
Ga0066903_1005659172	3300005764	Tropical Forest Soil	VPKFKVGDRVERVGWLVPEYMRKGIVTGVIPNKQRQDSFNEYEVNFGNKLIMIVYETQLRLVPTDPQ*
Ga0066903_1018904472	3300005764	Tropical Forest Soil	MPRFKVGDRVERIGSLIPEYMRSGVVVRVIPNEHADWFSEYEVNFGNQQIATFYETQLRPANEASDVNP*
Ga0066903_1019245972	3300005764	Tropical Forest Soil	LNAKFAVGDYVERIGSLVPEYMRSDVIIRVIPNDQGLDLFNEYEVNFGDQVIAIFYQTQLRLATKANA*
Ga0066903_1041605441	3300005764	Tropical Forest Soil	MSKFQTTSKFKIGDHVERIGVLIPKYMQKGVVTRIIPNPQGIDWFTEYEVNFEDRLIATFYQTQLRLLRPAV
Ga0066903_1062509851	3300005764	Tropical Forest Soil	MSKFNVGDQVERIGSLVPEYMRTGIVTKVIPNQDGLDWFTEYEVNFGNKTIAIFYETQLRLVKTAPDN*
Ga0066903_1075459071	3300005764	Tropical Forest Soil	RRTALMPKFNLGDQLERIGSLVPEYMRIGIVTKVVPNKDGMVWFTEYEVNFGNKMIAIFYETQLRLINASEK*
Ga0066903_1085239972	3300005764	Tropical Forest Soil	MPKFAVGDYVERIGSLVPEYMRSGVITRVIPNDQGLDLFNEYEVNFGNQVIAIFYETQLRTKANP*
Ga0075417_100312401	3300006049	Populus Rhizosphere	MPKFAVGDYVERIGSLVPEYMRNGVVIRLIPNDQGLDLFNEYEVNFGNQVIAIFYETQLRLATKANP*
Ga0075417_102320261	3300006049	Populus Rhizosphere	MPKFKVGDYVERIGSLVPEYMQSGVVTRVIPNDQGLDLFNEYEVNFGNQVVAILYESQLQATKPNP*
Ga0075417_103961663	3300006049	Populus Rhizosphere	MPKFKIGDHVERIGVLVPEYMRHGVVTRVIPNTETNGLDWLTEYEVNFDNQQIATFYETQVRLVESPTD*
Ga0075427_100873991	3300006194	Populus Rhizosphere	MPKFAVGDYVERIGSLVPEYMQSGVVTRVIPNDQGLDLFNEYEVNFGNQVVAILYESQLQATKPNP*
Ga0079222_114514112	3300006755	Agricultural Soil	MPKFAVGDYVERIGSLVPEYMRVIIRVIPNDQGLDLFNEYEVNFGNQVIAIFYETQLQLATKPNP*
Ga0075428_1000768403	3300006844	Populus Rhizosphere	MPKFAVGDHVERIGSLVPEYMRSGVITRVIPNDQGQDLFNEYEVNFSNQVVAILYESQLQLANKANP*
Ga0075428_1001071832	3300006844	Populus Rhizosphere	MPRFKVGDRVVRIGTLVPEYMREGTIVRVIPNDQGLDLFNEYEVNFGNQVIALLYESQLQLAAEANP*
Ga0075428_1002168574	3300006844	Populus Rhizosphere	MPRFKVGDRVERVGTLIPPYLKKGTVTKVMPNKDGLDRFTEYEVNFGNQIVATFYETQLRLAEAGDNAATT*
Ga0075428_1012884492	3300006844	Populus Rhizosphere	VPKFKVGDRVERIGWIVPEYMRNGIVTGVIPNKQGQDSFNEYKVNFGNQLIMILYETQLRLVPTDPH*
Ga0075428_1015687971	3300006844	Populus Rhizosphere	DSLVLEYHPPRMPKFRVGDQVERIGVLVPEYMRSGVITGVIPNDQGQDLFNEYEVDFGNEVIAILYETQLQLAATDRT*
Ga0075421_1000948182	3300006845	Populus Rhizosphere	MPKFAVGDYVERIGSLVPEYMRNGVVILLIPNDQGLDLFNEYEVNFGNQVIAIFYETQLRLATKANP*
Ga0075421_1001355914	3300006845	Populus Rhizosphere	VAIIGGNGVPSRTAMPRFKVGDRVVRIGTLVPEYMREGTIVRVIPNDQGLDLFNEYEVNFGNQVIALLYESQLQLAAEANP*
Ga0075421_1008702242	3300006845	Populus Rhizosphere	VPRFKIGDRVERIGWLVPEYMSKGIVTGVIPNKQGQDSFNEYEVNFGNRLIMILYETYD*
Ga0075421_1015438451	3300006845	Populus Rhizosphere	MPKFAVGDYVERIGSLVPEYMRSGVIIRVIPNDQGLDLFNEYEVNFGNQVIAIFYETQLRLATKNP*
Ga0075431_1008261681	3300006847	Populus Rhizosphere	MPKFKVGDHVERIGSLVPPYMHYGTVTRVTPYKSGMDWLTEYEVNFGDQLIGVFYETQLRLLKRAKDSS*
Ga0075433_104943131	3300006852	Populus Rhizosphere	MPNFRVGDEVERIGALVPDYMRSGDIVRVIPNKDGLELFTEYEVNFNNQLVATFYETQLRLVKPNKAATFKAAP*
Ga0075433_108035471	3300006852	Populus Rhizosphere	MPKFKVGDRVERIGSLVPEWMHSGVIFQSFQMIRAKTLFNEYEVNFGNQVIAIFYETQLRLVDITS*
Ga0075425_1002097663	3300006854	Populus Rhizosphere	MPKFKIGDQVERVGSLVAEWMRSGVILRVIPNNQGLNLFNEYEVHFGNQVIAIFYESELRLAVVDPRWE*
Ga0075425_1004598033	3300006854	Populus Rhizosphere	MPKFKVGDQVERVGSLVPEYMKSGVITRVIPNDQGQDLFNEYEVNFGNQVVAILYESQLQLATKANP*
Ga0075425_1015459931	3300006854	Populus Rhizosphere	VPKFKVGDRVERVGWLVPEYMRKGIVTGVIPNKQGQDSFNEYEVNFGNQLIMILYETQLRLAPTDPH*
Ga0075434_1006028962	3300006871	Populus Rhizosphere	MPRFKVGDRVERIGSLIPEYMRSGVVVRVIPNEHADWFSEYEVNFGNQQIATFYETQLRPANDSSDVNS*
Ga0075434_1022349082	3300006871	Populus Rhizosphere	MPKFKVGDRVERIGSLVPEYMRCGIVTEVIPNDQGRDLFNEYEVNFGNQLIATFYETQLRLYRSPTD*
Ga0075429_1003475392	3300006880	Populus Rhizosphere	VPKFKVGDRVERIGWLVPEYMRNGIVTGVIPNKQGQDSFNEYKVNFGNQLIMILYETQLRLVPTDPH*
Ga0075429_1015265321	3300006880	Populus Rhizosphere	NGVPSRTAMPRFKVGDRVVRIGTLVPEYMREGTIVRVIPNDQGLDLFNEYEVNFGNQVIALLYESQLQLAAEANP*
Ga0075426_101965832	3300006903	Populus Rhizosphere	MPKFAVGDYVERIGSLVPEYMPNGVVIRLIPNDQGLDLFNEYEVNFGNQVIAIFYETQLRLATKANP*
Ga0075424_1001853076	3300006904	Populus Rhizosphere	VPKFKVGDRVERVGWLVPEYMRKGIVTGVIPNKQGQDSFNEYEVNFGNQLIMILFETQLRLVTTDPH*
Ga0075424_1012364023	3300006904	Populus Rhizosphere	MPKFGIGDHVERIGSLVPEYMRSGVITQVIPNAQGLDLFNEYEVHFGNQVIAIFYETQL
Ga0075436_1009326531	3300006914	Populus Rhizosphere	MAKFKVGDRVERIGSLVPEWMRSGVIMRVIPNDQGQDLFNEYEVNFGNQVVAILYESQLQLATKANP*
Ga0075436_1011200731	3300006914	Populus Rhizosphere	VPKFKVGDRVERIGWLVPEYMRKGIVTGVIPNKQGHDSFNEYEVNFGNQLIMILYETQLRLAPTDPR*
Ga0075419_110994092	3300006969	Populus Rhizosphere	MPKFKIGDHVERIGVLVPEYMRHGVVTRVIPNTETNGLDWLTEYEVNFDNQQIATFYETQ
Ga0075419_113215251	3300006969	Populus Rhizosphere	VPRFKIGDRVERIGWLVPEYMSKGIVTGVIPNKQGQDSFNEYEVNFGNRLIMILYETQLR
Ga0079218_134310692	3300007004	Agricultural Soil	MPRFKVGDRVERVGSLIPLYMKKGVIVRVIQDKNLPDWFTQYEVNFADKLIATFYETQLLESARDSN*
Ga0075418_125842941	3300009100	Populus Rhizosphere	MVQEAIMPKFKIGDHVERIGVLVPEYMRHGVVTRVIPNTETNGLDWLTEYEVNFDNQQIATFYETQVRLVESPTD*
Ga0075418_128054772	3300009100	Populus Rhizosphere	MPRFKVGDRVERVGTLIPPYLKKGTVTKVTPNKDGLDRFTEYEVNFGNQIVATFYETQLRLAEAGDNAATT*
Ga0114129_101194061	3300009147	Populus Rhizosphere	VPKFKVGDRVERIGWLAPEYMRNGIVTGVIPNKQGQDPFNEYKVNFGNQLIMILYETQLRLVPTDPH*
Ga0114129_102105843	3300009147	Populus Rhizosphere	MPKFKVGDRVERIGSLVPEYMRSGIITRVIPNNQGMDLFNEYEVNFDNRLIAIFYETQLRLAAADQN*
Ga0114129_109920762	3300009147	Populus Rhizosphere	MPKFKVGDRVERIGWLVPEYMRKGIVTGVIPNKQGHDSFNEYEVNFGNQLIMILYETQLRLAPRDPH*
Ga0114129_122424522	3300009147	Populus Rhizosphere	MVRYDAALALQQGAAQMPKFKVGDRVERIGSLVPEWMHSGVIMRVIPNDQGQDLFNEYEVNFGNQVVAILYESQLRLATKANP*
Ga0075423_104933181	3300009162	Populus Rhizosphere	MPKFKVGDRVERIGSLVPEWRRSGVIIRVIPNDQGLDLFNEYEVNVGNQVIAIFYETQLRLSSA*
Ga0075423_105520922	3300009162	Populus Rhizosphere	CAGKRSYLAVPKFKVGDRVERVGWLVPEYMRKGIVTGVIPNKQGQDSFNEYEVNFGNQLIMILYETQLRLAPTDPH*
Ga0075423_107941801	3300009162	Populus Rhizosphere	MPRFKVGDRVERIGSLIPEYMRSGVVVRVIPNEHADWFSEYEVNFGNQQIATFYETQLRPANDSSDVN
Ga0075423_110603201	3300009162	Populus Rhizosphere	VPRFKIGDRVERIGWLVPEYMRRGIVTGIIPNKQGQDSFNEYEVNFGNRLIMILYETQLRLVATDPH*
Ga0075423_112117461	3300009162	Populus Rhizosphere	MAKFKVGDRVERIGSLVPEWMRSGVIMRVIPNDQGQDLFNEYEVNFGNQVIAIFYETQLRLVAEAGC*
Ga0075423_122850361	3300009162	Populus Rhizosphere	RSYLAVPKFKVGDRVERIGWLAPEYMRNGIVTGVIPNKQGQDPFNEYKVNFGNQLIMILYETQLRLVPTDPH*
Ga0126374_118991041	3300009792	Tropical Forest Soil	MTKFKVGDRVERIGWLVPEYMRKGIVTGVIPNKQGQDSFNEYEVNFDNQLIMILFETQLRLAPTDPH*
Ga0126380_103099061	3300010043	Tropical Forest Soil	VPKFKVGDRVERIGWLVPEYMRNGIVTGVIPNKQGQDSFNEYKVNFGNQLIM
Ga0126384_104110122	3300010046	Tropical Forest Soil	MPKFAVGDYVERIGSLVPEYMRSGVITRVIPNDQGLELFNEYEVNFGNQVIAIFYETQLRLVTNNP*
Ga0126384_107977732	3300010046	Tropical Forest Soil	MPKFKVGDHVERVGSLVPEYMKSGVITRVIPNDQGQDLFNEYEVNFGNQVIAIFYESQLRLATTANP*
Ga0126384_120053512	3300010046	Tropical Forest Soil	MGLMPKFKVGDHVERIGVLASGQMRNGVVVRVIPNKIGQDLFYEYEVTFGTRMIAVLYETQLRLASDSN*
Ga0126370_101327893	3300010358	Tropical Forest Soil	KFKVGDRVERVGWLVPEYMRKGIVTGVIPNKQRQDSFNEYEVNFGNKLIMILSETQLRLVPTDPQ*
Ga0126376_119125011	3300010359	Tropical Forest Soil	MPKFAVGDYVERIGSLVPEYMRSGVITRVIPNDQGLALFNEHEVNFGNQVIAIFYETQLRLVTKANP*
Ga0126372_106066212	3300010360	Tropical Forest Soil	MPKFKVGDRVERIGWLVPEYMRKGIVTGVIPNKQGHDSFNEYEVNFGNQLIMILFETQLRLVTTDPH*
Ga0126372_110074192	3300010360	Tropical Forest Soil	LQQGAAIMPKFKVADRVERIGSLVPDYMRNGIVTRVIPNNEGQDLFNEYEVNFGNQLIATFYETQLRLARDPN*
Ga0126377_107355622	3300010362	Tropical Forest Soil	MPKFKVGDQVERIGSLVPEYMRCGIVTGVIPNDLGQDLFNEYEANFGNQLIATFYETQLRLLRSPTD*
Ga0126377_120211631	3300010362	Tropical Forest Soil	MPKFKVGDHVERVGSLVPEYMKSGVITRVIPNDQGLDLFNENEVSFGNQMIAIFYQMRESLGLKNG*
Ga0126381_1046480062	3300010376	Tropical Forest Soil	MPKFAVGDYVERIGSLVPEYMRSGVSTRVIPNDQGLDLFNEYEVNFGNQVIAIFYETQSRLVTKANP*
Ga0126383_121622202	3300010398	Tropical Forest Soil	MPKFAVGDYVERIGSLVPEYMRSGVITRVIPNDQGLDLFNEYEVNYGNQVIAIFYETQLRLVTKANP*
Ga0126383_128615981	3300010398	Tropical Forest Soil	MPKFKVGDRVERIGSLVPEWMRSGVILRVIPNDQRQDLFNEYEVNFGNQVIAIFYETQLRLVDTPD*
Ga0150985_1103145372	3300012212	Avena Fatua Rhizosphere	LIGRGTALMPNFKVGDHVERTGSLVPEYMRSGIVIKVIPNKHRLDWFTEYEVNFDNKMIGIFYETQLRLVTAANDPDK*
Ga0137367_104094432	3300012353	Vadose Zone Soil	MPRFAVGDHVERIGSLVPEYMRSGVIIRVIPNDQGLDMFNEYEVNFGNQVIAIIYENQLRLETNNP*
Ga0137366_104632853	3300012354	Vadose Zone Soil	MPKFKVGDHVERIGSHVPEYMRSGIVTRVIPNQQGHHLFNEYEVNFGNQVIALFYETQLCLVESPENST*
Ga0150984_1082316532	3300012469	Avena Fatua Rhizosphere	MFKVGDQVERIGSLVPQYMRNGTIARIVPNKDGIPWLTEYEVNFGNQLIATFYETQLRLVKLPSDGDFGRTHY*
Ga0126375_116301351	3300012948	Tropical Forest Soil	MPKFKVGDRIERIGWLVPEYMRKGIVTGVIPNKQGQDSFNEYEVNFGNKLIMIVYETQLRLVPTDPQ*
Ga0126369_103372683	3300012971	Tropical Forest Soil	MPKFKIGDRVERIGSLVPDYMSSGIVTRVIPNKEGQDLFNEYEVNFGNQLTATFYETQLRLARDPN*
Ga0126369_104575272	3300012971	Tropical Forest Soil	MPRFKVGDRVERIGSLIPEYMRSGVVVRVIPNEHADWFSEYEVNFGNQQIATFYETQLRPANEAPDVNP*
Ga0126369_122558221	3300012971	Tropical Forest Soil	FKVGDRVERVGWLVPEYMRKGIVTGVIPNKQRQDSFNEYEVNFGNKLIMILSETQLRLVPTDPQ*
Ga0132258_136386472	3300015371	Arabidopsis Rhizosphere	MPRFKVGDHVERVGVLIPPYMRDGTITRVIPNKDGLDWFTEYEVNFGNQIIAVFYETQLRLVKPATK*
Ga0132255_1042243451	3300015374	Arabidopsis Rhizosphere	SRVSIQPGIGCAAMPKFKIGDHVERVGGIIPEYMREGIIIRVIPDEHRHDLFNAYEVDFGHQVIAILYESQLRLATKANP*
Ga0182032_115753342	3300016357	Soil	MPRFKVGDRVERIGSLIPEYMRSGVVVRVIPNEHADWFSEYEVNFGNQQIATFYETQLRPANEAPDVNP
Ga0182037_106009912	3300016404	Soil	MSKFKIGDHVERIGSLVPQYMRSGIVTKVIPNKDGMDWFTEYEVNFGNKTIAVFYQTQLRLVKAGMDSV
Ga0207652_115321702	3300025921	Corn Rhizosphere	MPKFKVGDHVERTGTLVPDYMHYGDVIRVIPNSQGLYWFTQYEVDFGNQLIRTLYETQLQLGKAVQDSG
Ga0209814_100695265	3300027873	Populus Rhizosphere	MPKFAVGDYVERIGSLVPEYMRNGVVIRLIPNDQGLDLFNEYEVNFGNQVIAIFYETQLRLATKANP
Ga0209382_101828251	3300027909	Populus Rhizosphere	KFKIGDHVERIGVLVPEYMRHGVVTRVIPNTETNGLDWLTEYEVNFDNQQIATFYETQVRLVESPTD
Ga0209382_103530512	3300027909	Populus Rhizosphere	MPRFKVGDRVVRIGTLVPEYMREGTIVRVIPNDQGLDLFNEYEVNFGNQVIALLYESQLQLAAEANP
Ga0209382_110426082	3300027909	Populus Rhizosphere	VPKFKVGDRVERIGWIVPEYMRNGIVTGVIPNKQGQDSFNEYKVNFGNQLIMILYETQLRLVPTDPH
Ga0209382_117090931	3300027909	Populus Rhizosphere	VPRFKIGDRVERIGWLVPEYMSKGIVTGVIPNKQGQDSFNEYEVNFGNRLIMILYETYD
Ga0209382_117788281	3300027909	Populus Rhizosphere	VPKFKVGDRVERIGWVVPEYMHKSIVTGVIPNKQGLDSFNEYEVNFGNQLIMILYET
Ga0306925_110855363	3300031890	Soil	RPVLFLAVGSGNMPRFKVGDRVERIGSLIPEYMRSGVVVRVIPNEHADWFSEYEVNFGNQQIATFYETQLRPANEAPDVNP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F085886

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences