Metagenome / Metatranscriptome Family F085914

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F085914
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	61 residues
Representative Sequence	MLQGMFGKRLAEHFSLLESSSLVLGPKGNSQVALTRMRMPNGFPGPTPHIPPEKAFS
Number of Associated Samples	93
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.10 %
% of genes near scaffold ends (potentially truncated)	97.30 %
% of genes from short scaffolds (< 2000 bps)	92.79 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (57.658 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (28.829 % of family members)
Environment Ontology (ENVO)	Unclassified (21.622 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.153 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.32% β-sheet: 0.00% Coil/Unstructured: 73.68%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF12680	SnoaL_2	18.92
PF00440	TetR_N	10.81
PF00106	adh_short	1.80
PF00881	Nitroreductase	0.90
PF07690	MFS_1	0.90
PF13561	adh_short_C2	0.90
PF00483	NTP_transferase	0.90
PF04185	Phosphoesterase	0.90
PF02321	OEP	0.90
PF12833	HTH_18	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.80
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.66 %
Unclassified	root	N/A	42.34 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.66 %
Unclassified	root	N/A	42.34 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.66 %
Unclassified	root	N/A	42.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.34 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	21.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.34 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	18.92 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.34 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	18.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.70 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.34 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	18.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.70 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.34 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.70 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	1.80 %
Pseudoxanthomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Pseudoxanthomonas	0.90 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.34 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.70 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	1.80 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.90 %
unclassified Pseudoxanthomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Pseudoxanthomonas → unclassified Pseudoxanthomonas	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.34 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.70 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	1.80 %
Pseudoxanthomonas sp. CF125	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Pseudoxanthomonas → unclassified Pseudoxanthomonas → Pseudoxanthomonas sp. CF125	0.90 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.90 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10642795	Not Available	614	Open in IMG/M
3300001593\|JGI12635J15846_10701152	Not Available	583	Open in IMG/M
3300001593\|JGI12635J15846_10764973	Not Available	554	Open in IMG/M
3300002245\|JGIcombinedJ26739_100520083	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300002907\|JGI25613J43889_10009223	All Organisms → cellular organisms → Bacteria	2723	Open in IMG/M
3300005541\|Ga0070733_10587526	Not Available	746	Open in IMG/M
3300005591\|Ga0070761_10815802	Not Available	587	Open in IMG/M
3300005602\|Ga0070762_10504462	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300005602\|Ga0070762_11028915	Not Available	565	Open in IMG/M
3300005921\|Ga0070766_10564580	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300006059\|Ga0075017_101366850	Not Available	556	Open in IMG/M
3300006176\|Ga0070765_102094881	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300006893\|Ga0073928_11155796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Pseudoxanthomonas → unclassified Pseudoxanthomonas → Pseudoxanthomonas sp. CF125	523	Open in IMG/M
3300007258\|Ga0099793_10492474	Not Available	609	Open in IMG/M
3300007788\|Ga0099795_10077480	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1266	Open in IMG/M
3300009143\|Ga0099792_10392101	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300009624\|Ga0116105_1003138	All Organisms → cellular organisms → Bacteria	3511	Open in IMG/M
3300009643\|Ga0116110_1036871	All Organisms → cellular organisms → Bacteria	1806	Open in IMG/M
3300009644\|Ga0116121_1175776	Not Available	678	Open in IMG/M
3300009839\|Ga0116223_10572698	Not Available	653	Open in IMG/M
3300010341\|Ga0074045_10660214	Not Available	665	Open in IMG/M
3300010343\|Ga0074044_10413404	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300012203\|Ga0137399_10494956	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300012683\|Ga0137398_10954414	Not Available	596	Open in IMG/M
3300012918\|Ga0137396_11111827	Not Available	564	Open in IMG/M
3300012925\|Ga0137419_11833377	Not Available	520	Open in IMG/M
3300012930\|Ga0137407_11073494	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300014160\|Ga0181517_10297178	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300014164\|Ga0181532_10128745	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1545	Open in IMG/M
3300014495\|Ga0182015_10448565	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300014501\|Ga0182024_12060367	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	629	Open in IMG/M
3300014657\|Ga0181522_10560000	Not Available	692	Open in IMG/M
3300017932\|Ga0187814_10404892	Not Available	532	Open in IMG/M
3300017946\|Ga0187879_10423740	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300017946\|Ga0187879_10867622	Not Available	505	Open in IMG/M
3300018026\|Ga0187857_10444753	Not Available	583	Open in IMG/M
3300018030\|Ga0187869_10172066	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300018042\|Ga0187871_10753714	Not Available	542	Open in IMG/M
3300018044\|Ga0187890_10443749	Not Available	728	Open in IMG/M
3300018057\|Ga0187858_10154815	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1525	Open in IMG/M
3300020199\|Ga0179592_10336197	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	666	Open in IMG/M
3300020199\|Ga0179592_10339151	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	663	Open in IMG/M
3300020583\|Ga0210401_11142558	Not Available	637	Open in IMG/M
3300021086\|Ga0179596_10690903	Not Available	516	Open in IMG/M
3300021180\|Ga0210396_10077746	All Organisms → cellular organisms → Bacteria	3014	Open in IMG/M
3300021181\|Ga0210388_10014003	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6420	Open in IMG/M
3300021181\|Ga0210388_10837608	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300021403\|Ga0210397_11161003	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	600	Open in IMG/M
3300021404\|Ga0210389_11446875	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	523	Open in IMG/M
3300021405\|Ga0210387_10777749	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300021405\|Ga0210387_11715762	Not Available	531	Open in IMG/M
3300021406\|Ga0210386_10221624	All Organisms → cellular organisms → Bacteria	1607	Open in IMG/M
3300021432\|Ga0210384_11024887	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300021433\|Ga0210391_10569489	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300021433\|Ga0210391_11356499	Not Available	547	Open in IMG/M
3300022557\|Ga0212123_10710299	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	617	Open in IMG/M
3300023048\|Ga0233341_1025786	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	910	Open in IMG/M
3300024271\|Ga0224564_1135221	Not Available	508	Open in IMG/M
3300025612\|Ga0208691_1017528	All Organisms → cellular organisms → Bacteria	1721	Open in IMG/M
3300026514\|Ga0257168_1142085	Not Available	534	Open in IMG/M
3300027165\|Ga0208608_115275	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	511	Open in IMG/M
3300027370\|Ga0209010_1044820	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300027439\|Ga0209332_1063117	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300027587\|Ga0209220_1093736	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300027609\|Ga0209221_1072648	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300027619\|Ga0209330_1089237	Not Available	702	Open in IMG/M
3300027648\|Ga0209420_1072911	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300027652\|Ga0209007_1099837	Not Available	729	Open in IMG/M
3300027676\|Ga0209333_1200396	Not Available	526	Open in IMG/M
3300027729\|Ga0209248_10072595	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300027737\|Ga0209038_10109952	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300027768\|Ga0209772_10050554	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1237	Open in IMG/M
3300027795\|Ga0209139_10237344	Not Available	644	Open in IMG/M
3300027889\|Ga0209380_10279507	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300027895\|Ga0209624_10361779	All Organisms → cellular organisms → Bacteria	967	Open in IMG/M
3300028776\|Ga0302303_10220895	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	651	Open in IMG/M
3300028795\|Ga0302227_10097366	All Organisms → cellular organisms → Bacteria	1224	Open in IMG/M
3300028801\|Ga0302226_10128958	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300029882\|Ga0311368_10619027	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300029882\|Ga0311368_10825512	Not Available	628	Open in IMG/M
3300029882\|Ga0311368_11019284	Not Available	544	Open in IMG/M
3300029910\|Ga0311369_10092741	All Organisms → cellular organisms → Bacteria	3074	Open in IMG/M
3300029910\|Ga0311369_10857168	Not Available	729	Open in IMG/M
3300029943\|Ga0311340_11122146	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300029944\|Ga0311352_11005103	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	642	Open in IMG/M
3300029951\|Ga0311371_10162179	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	3400	Open in IMG/M
3300029951\|Ga0311371_10887846	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300029993\|Ga0302304_10087177	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1205	Open in IMG/M
3300029999\|Ga0311339_11402595	Not Available	627	Open in IMG/M
3300029999\|Ga0311339_11643776	Not Available	565	Open in IMG/M
3300030042\|Ga0302300_1214603	Not Available	533	Open in IMG/M
3300030056\|Ga0302181_10437141	Not Available	559	Open in IMG/M
3300030057\|Ga0302176_10467539	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	509	Open in IMG/M
3300030058\|Ga0302179_10290082	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	720	Open in IMG/M
3300030058\|Ga0302179_10355850	Not Available	645	Open in IMG/M
3300030399\|Ga0311353_10924506	Not Available	735	Open in IMG/M
3300030399\|Ga0311353_11369507	Not Available	577	Open in IMG/M
3300030503\|Ga0311370_10034774	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	7574	Open in IMG/M
3300030618\|Ga0311354_10225112	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1987	Open in IMG/M
3300030618\|Ga0311354_10415857	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1352	Open in IMG/M
3300030687\|Ga0302309_10513779	Not Available	570	Open in IMG/M
3300030693\|Ga0302313_10012058	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	4529	Open in IMG/M
3300030815\|Ga0265746_1020014	Not Available	809	Open in IMG/M
3300030977\|Ga0265721_1005557	Not Available	664	Open in IMG/M
3300031090\|Ga0265760_10138418	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300031090\|Ga0265760_10161776	Not Available	739	Open in IMG/M
3300031233\|Ga0302307_10285848	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300031234\|Ga0302325_11832452	Not Available	758	Open in IMG/M
3300031234\|Ga0302325_13074446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300031236\|Ga0302324_103527038	Not Available	507	Open in IMG/M
3300031837\|Ga0302315_10680909	Not Available	541	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.18%
Aquatic	Environmental → Aquatic	19.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.45%
Peat	Environmental → Terrestrial → Peat	28.83%
Freshwater	Environmental → Aquatic → Freshwater	17.12%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.80%
Sediment	Environmental → Aquatic → Sediment	0.90%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	28.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	28.83%
Loam	Environmental → Terrestrial → Soil → Loam	18.02%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	17.12%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.60%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.90%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	28.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	18.02%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.22%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	12.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.71%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.60%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.80%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.80%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.90%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	28.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	12.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.91%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	6.31%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.50%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.60%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.60%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.70%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.80%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.80%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.90%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.90%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.90%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.90%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.90%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.90%
Leaf Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Leaf Litter	0.90%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300023048	Leaf litter microbial communities from Shasta-Trinity National Forest, California, United States - GEON-DECOMP-247	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300027165	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF035 (SPAdes)	Environmental	Open in IMG/M
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027439	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028776	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_1	Environmental	Open in IMG/M
3300028795	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_1	Environmental	Open in IMG/M
3300028801	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029993	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_2	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030042	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_1	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030687	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_1	Environmental	Open in IMG/M
3300030693	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_2	Environmental	Open in IMG/M
3300030815	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030977	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLI2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031837	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_1	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_106427952	3300001593	Forest Soil	MLHGMFGKRLAEHFSLLESSSLVLGPKGNSQVALTRMRMPNGFPGPTPHIPPEKAFSISVHL
JGI12635J15846_107011521	3300001593	Forest Soil	MLQGMFGRKLAEHFSLLESSSILLGPEGKTQVALTRMRMPNGFPGPTPHIPLEKAFSVSV
JGI12635J15846_107649732	3300001593	Forest Soil	MLQGMFGQRLAEHFSLLESSSIVLGPEGKTQVALTRMRMPNGFPGPTPHIPPEKAFSVSVHLRRPDSI
JGIcombinedJ26739_1005200832	3300002245	Forest Soil	MLHCMFGKRLAEHFSLLESSSLVLGPKGNSQVALTRMRMPNGFTGPTPHI
JGI25613J43889_100092231	3300002907	Grasslands Soil	MLQGMFGKRLAEHFSLLESSSLVLSPRGDSQVALTRMRMPNGFPGPTPHIPPEKAFS
Ga0070733_105875262	3300005541	Surface Soil	MLQGMFGKRLVEHFSLLESSSLVLGPKGNSQVALTRMRMPNGFPGPTPHIPPEKAFSISVHL
Ga0070761_108158021	3300005591	Soil	MLQGMFGKRLAEHFSLPESSSLVLGPKTNSQVALTRMRMPNGFPGPTPHIPPEKAFSISVHLRRPD
Ga0070762_105044621	3300005602	Soil	MLQGMFGKRLAEHFSLLESSSLVLGPQGNSQVALTRMRMPNGFPGPTPHIPPEKAF
Ga0070762_110289151	3300005602	Soil	MLQGMFGRKLAEHFSLLESSSIVLGPKGMTQVALTRMRMPNGFPGPTPHIPPEKAF
Ga0070766_105645802	3300005921	Soil	MLQGMFGKRLAEHFSLLESSSLVLGPKGNPQVALTRMRMPNGFPGPTPHIPPEKA
Ga0075017_1013668501	3300006059	Watersheds	MLQGMFGKRLAEHFSLLESSSLVLGPKGDSQVALTRMRMPNGFPGPTPHIPPEKAFSVSVHLRRP
Ga0070765_1020948812	3300006176	Soil	MLQGMFGKRLAEHFSLLESSSLAFGPKGNSQVALTRMRMPNGFPGPTPHIPPEKAFSIS
Ga0073928_111557961	3300006893	Iron-Sulfur Acid Spring	MLQGMFGNRLAKHFSLVESSSLLLGPNGNSQVALTRMRMPNGFPGPTPHIPPEKAFSISV
Ga0099793_104924742	3300007258	Vadose Zone Soil	MLQGMFGKRLAEHFSLLESSSLVLGPKENSQVVLTRMRMPNGFPGPTPHIPREKAFSISVHLRRPDSIKGWGTWL
Ga0099795_100774803	3300007788	Vadose Zone Soil	MFQGMFGKRLAEHFSLLESSSLVLGPKGNSQVALTRMRMPNGFPGPTPH
Ga0099792_103921012	3300009143	Vadose Zone Soil	MLQGMFGQRLAQHFSLLESSSLVLGSRGKTQVALTRMRMPNGFPGPTPHIPPEKAFSISVHLRRPDSI
Ga0116105_10031385	3300009624	Peatland	MLQGMFGKRLAEHFSLLESSSLVFGPKGNSQVALTRMRMPNGFPGPTPHIPPEKAFSI
Ga0116110_10368711	3300009643	Peatland	MLQGMFGKRLAEHFSLLESSSLVLGPKGNSQVALTRMRMPNGFPGPTPHIPPEKAYSISVHLRRPDSIKGWGTWLDG
Ga0116121_11757762	3300009644	Peatland	MLQGMFGQSLAEHFSLRESSSIVLGPKGKSQVALTRMRMPNGFPGPTPHIPPE
Ga0116223_105726982	3300009839	Peatlands Soil	MLQGMFGKRLAEHFSLLESSSLVFGPKGNAQVALTRMRMPNGFPGPTPHIPP
Ga0074045_106602142	3300010341	Bog Forest Soil	MLQGMFGKRLAQHFSLLESSSLVFGPKGNSQVALTRMRMPNGFPGPTPHIPP
Ga0074044_104134041	3300010343	Bog Forest Soil	MLPGMFGKRLAEHFSLPASSSLVLGPKGNSQVALTRMRMPNGFPGPTPHIPPEKAFSI
Ga0137399_104949562	3300012203	Vadose Zone Soil	MLQGMFGKRLAEHFSLLESSSFVLGPKGNSQVALTRMRMPNGFPGPTPHIPPE
Ga0137398_109544142	3300012683	Vadose Zone Soil	MLQGMFGKRLEEHFSLLESSSLVLGPKGNSQVALTRMRMPNGFPGPTPHIPPEK
Ga0137396_111118271	3300012918	Vadose Zone Soil	MLQGMFGKRLAERFSLLESSSLVLGPKGNSQVALTRMRMPNGFPGPTPHIPPEKAF
Ga0137419_118333771	3300012925	Vadose Zone Soil	MLQGMFGKRLAEHFSLLESSSLVFGPKGNSQVALTRMRMPNGFPGPTPHIPPEKAFSIS
Ga0137407_110734941	3300012930	Vadose Zone Soil	MLQGMFGQRLAEHFSLLESSSLALSPGGNSQIALTRMRMPNGFPGPTPHIPPEKAF
Ga0181517_102971782	3300014160	Bog	MLQGMFGRRLVEHFSLLESSSIVLGPKGKTQVALTRMRMPNGFPGPTPHIPP
Ga0181532_101287451	3300014164	Bog	MLQGMFGKRLAEHFSLLESSSRVFGPKGNSQVALTRMRMPNGFPGPTPHIPPEKAFSISV
Ga0182015_104485651	3300014495	Palsa	MLQGMFGQRLAKHFSLLESSSTVLGPKGKTQVALTRMRMPNGFPGPTPHIPPEKAFS
Ga0182024_120603671	3300014501	Permafrost	MLQGMFGKRLAEHFSLLESSSLVLGPKGSSQVALTRMRMPNGFPGPTPHIPPEKAFSISVHLRRPDSVK
Ga0181522_105600002	3300014657	Bog	MLQGMFGKRLAEHFSLLESSSLVLGPKGNSQVALTRMRMPNGFPGPTPHIPPEKAFSVSV
Ga0187814_104048921	3300017932	Freshwater Sediment	MLQGMFGKRLAEHFSLLESSSLVLGPKGNSQVALTRMRMPNGFPGPTPHIPPEKA
Ga0187879_104237402	3300017946	Peatland	MLQGMFGKRLAEHFSLLESSSLVLGPKGNSQVALTRMRMPNGFPGPTPHIP
Ga0187879_108676221	3300017946	Peatland	MLQGMFGQRLAEHFSLLESSSIVLGPKGTTQVALTRMRMPNGFPGPTPHIPPEKAYSVSVHLRRPDSIK
Ga0187857_104447532	3300018026	Peatland	MLQGMFGKRLAEHFSLLESCSLVLGPKGNSQVALTRMRMPNGFPGPTPHIPPEK
Ga0187869_101720662	3300018030	Peatland	MLQGMFGKRLVEHFSLLESSSLVLGPKGNSQVALTRMRMPNGFPGPTPHIPPEKAYSISVHLRRPDSIKGWG
Ga0187871_107537141	3300018042	Peatland	MLQGMFGPRLAEHFSLLESSSIVLGPKGKTQVALTRMRMPNGFPGPTPHIPPEKA
Ga0187890_104437491	3300018044	Peatland	MLQGMFGQRLAEHFSLLESSSIVLGPKGTTQVALTRMRMPNGFPGPTPHIPPEKAYSVSVHLRRPDS
Ga0187858_101548153	3300018057	Peatland	MLQGMFGKRLAEHFSLLESSSIVLGPKGNSQVALTRMRMPNGFPGPTPHIPPEKAFSISV
Ga0179592_103361972	3300020199	Vadose Zone Soil	MLQGMFGKRLEEHFSLLESSSLVLGPKGNSQVALTRMRMPNGFPGPTPHIPPEKAFSISVHLRRPDS
Ga0179592_103391511	3300020199	Vadose Zone Soil	MLQGMFGQRLAQHFSLLESSSLVLGSRGKTQVALTRMRMPNGFPGPTPHIPPEKAFSISVHLRR
Ga0210401_111425582	3300020583	Soil	MLQGMFGKRLAEHFSLLESSSYVFGPKGNSQVALTRMRMPNGFPGPTPHIPPEKAFSISV
Ga0179596_106909031	3300021086	Vadose Zone Soil	MLQGMFGRRLAEHFSLLESSSIVLGPKGESQVALTRMRMPNGFPGPTPHIPPEKAFSVSVHLRRPDSIKG
Ga0210396_100777464	3300021180	Soil	MLQGMFGKRLAEHFSLLESSSLVLGPKGNSQVALTRMRMPNGFPGPTPHIPPEKAIRAPAPSRQH
Ga0210388_100140035	3300021181	Soil	MLQGMFGQRLAQHFSLLESSSLVLGSKGKTLVALTRMRMPNGFPGPTPHIPPEKAFFNIGVSSSPRQH
Ga0210388_108376082	3300021181	Soil	MLQGMFGKRLAEHFSLLESSSLVLGPKGNSQVALTRMRMPNGFPGPTPHIPPEKAFSIS
Ga0210397_111610032	3300021403	Soil	MLQGMFGQKLAKHFSLLESSSLVLSPRGNSQVALTRMRMPNGFPGPTPHIPPEKAFSVSVHLRRPDSVKG
Ga0210389_114468752	3300021404	Soil	MLQGMFGKRLAEHFSLLESSSLVFGPKGNSQVALTRMRMPNGFPGPTPHIPPEKAFSISVHL
Ga0210387_107777491	3300021405	Soil	MLQGMFGKRLAEHFSLLESSSLMFGPKGDSQVALTRMRMPNGFPGPTPHIPPEKAFSISVHLRR
Ga0210387_117157622	3300021405	Soil	MPEGMFGKRLAEHFSLLESSSLVLGPRGNSQVALTRMRMPNGFPGPTPHIPPEKAF
Ga0210386_102216241	3300021406	Soil	MLQGMFGKRLAEHFSLLESSSLVFGPKGNSQVALTRMRMPNGFPGPTPHIPPEKAFSISV
Ga0210384_110248872	3300021432	Soil	MLQGMFGKRLAEHFSLLESSSLVLGPKGNSQVALTRMRMPNGFPGPTP
Ga0210391_105694891	3300021433	Soil	MLQGMFGQRLAEHFSLLESSSTVLGPEGKTQVALTRMRMPNGFPGPTPHIPPEMAFSVSVHLR
Ga0210391_113564991	3300021433	Soil	MLQGMFGKRLAEHFSLLESSSIVLGPKGYSQVALTRMRMPNGFPGPTPHIPPEKAFSISVHLRRPDSIKGWGTW
Ga0212123_107102992	3300022557	Iron-Sulfur Acid Spring	MLQGMFGKRLAEHFSLLESSSLVLGPKGNPQVALTRMRMPNGFPGPTPHIPPEKAFSISVHLRRP
Ga0233341_10257861	3300023048	Leaf Litter	MKGMFGKTLARHFSLPRSTSLLLKSKSPAQVAMTRVTMPSGFPGPTPPIPPEQAFSVSVHLRRPDNAKGWGA
Ga0224564_11352212	3300024271	Soil	MLQGMFGKRLAEHFSLLESSSLVLGPKGNSQVALTRMRMPNGFPGPTPHIPPEKAF
Ga0208691_10175283	3300025612	Peatland	MLQGMFGKRLAEHFSLLESSSLVFGPKGNSQVALTRMRMPNGFPGPTPHIPP
Ga0257168_11420852	3300026514	Soil	MLQGMFGQRLAEHFSLLESSSLVLSPGGNSQIALTRMRMPNGFPGPTPHIPPEKAFS
Ga0208608_1152751	3300027165	Forest Soil	MLQGMFGKRLAEHFSLLESSSLVLGPKGNSQVALTRMRMPNGFPGPTPHIPPEKAFSISVHL
Ga0209010_10448201	3300027370	Forest Soil	MLQGMFGKRLAEHFSLLESSSLVFGPKGNSQVALTRMRMPNGFPGPTPHIPPEKAFS
Ga0209332_10631172	3300027439	Forest Soil	MLQGMFGKRLAEHFSLLESSSLVFGSKGNSQVALTRMRMPNGFPGPTPHIPPEKAFSI
Ga0209220_10937362	3300027587	Forest Soil	MLQGMFGKRLAEHFSLLESSSLVLGPKGNSQFALTRMRMPNGFPGPTPHIP
Ga0209221_10726481	3300027609	Forest Soil	MLQGMFGKRLAEHFSLLESSSLVFGPKENSQVALTRMRMPNGFPGPTPHIP
Ga0209330_10892371	3300027619	Forest Soil	MLQGMFGKRLAEHFSLLESSSLVLGPKGNSQVALTRMRMPNGFPGPTPHIPPEK
Ga0209420_10729111	3300027648	Forest Soil	MLQGMFGKRLAEHFSLLESSSLVLGPKGNSQVALTRMRMPNGFPGPTPHIPPEKAFSI
Ga0209007_10998371	3300027652	Forest Soil	MLQGMFGKRLAEHFSLLESSSLVLGPKGNSQVALTRMRMPNGFPGPTPHIPPEKAFS
Ga0209333_12003961	3300027676	Forest Soil	MLQGMFGPRLAEHFSLLESSSIVLGPKGKTQVALTRMRMPNGFPGPTPHIPPEKAFSVSVHLRRPNSIKG
Ga0209248_100725951	3300027729	Bog Forest Soil	MLQGMFGQRLAEHFSLLESSSILLGPKGKPQVALTRMRMPNGFPGPTPHIPPEKAFSVSVHLRRPESIKGWGTWLD
Ga0209038_101099521	3300027737	Bog Forest Soil	MLPGMFGKRLAEHFSLPASSSLVLGPKGNSQVALTRMRMPNGFPGPTPHI
Ga0209772_100505541	3300027768	Bog Forest Soil	MLQGMFGKRLAEHFSLLESSSILLGPKGKPQVALTRMRMPNGFPGPTPHIPPEKAFSISVHLRRPESITGWGTWLDGRFHRVT
Ga0209139_102373441	3300027795	Bog Forest Soil	MLQGMFGKRLAEHFSLLESSSILLGPKGKPQVALTRMRMPNGFPGPTPHIPPEKAFSISVHLRRPDSIKGWGTWLDG
Ga0209380_102795072	3300027889	Soil	MLQGMFGPRLAEHFSLLESSSIVLGPKGKTQVALTRMRMPNGFPGPTPHIPP
Ga0209624_103617791	3300027895	Forest Soil	MLQGMFGKRLAEHFSLLESSSLVLGPKGNSQVALTRMRMPNGFTGPTPHIPP
Ga0302303_102208951	3300028776	Palsa	MLQGMFGKRLAEHFSLLESSSLVLGPKGNSQVALTRMRMPNGFPGPTPHIPPEKAFSVSVHLRRPDSVKGWGTWL
Ga0302227_100973663	3300028795	Palsa	MLQGMFGKRLAEHFSLLESSSLVFGLKGNSQVALTRMRMPNGFPGPTPHIPPE
Ga0302226_101289582	3300028801	Palsa	MLQGMFGRKLAEHFSLLESSSIVLGPEGKTQVALTRMRMPNGFPGPTPHIPPEKAFSVSVHLRRPNSIKGWGTWINGRFHR
Ga0311368_106190272	3300029882	Palsa	MLQGMFGKRLAEHFSLLESSSLLLGPKGNSQVALTRMRMPNGFPGPTP
Ga0311368_108255121	3300029882	Palsa	MLQGMFGKRLAEHFSLLESSSLVFGLKGNSQVALTRMRMPNGFPGPTPHIPPEKAFSI
Ga0311368_110192841	3300029882	Palsa	MLQGMFGKRLAEHFSLPESSSIVFGPKGNSQVALTRMRMPNGFPGPTPHIPPEKAFSISV
Ga0311369_100927415	3300029910	Palsa	MLQGMFGKRLAEHFSLLESSSLVFGSKGNSQVALTRMRMPNGFPGPTPHIPPEKAFSISVQTTPPPSRSSH
Ga0311369_108571681	3300029910	Palsa	MLQGMFGRKLAEHFSLLESSSIVLGPEGKTQVALTRMRMPNGFPGPTPHIPPEKAFSVSVHLRRPNSIKGWGTWIDGR
Ga0311340_111221462	3300029943	Palsa	MLQGMFGKRLAEHFSLLESSSLVFGPKGNSQLALTRMRMPNGFPGPTPLIPPEKAF
Ga0311352_110051032	3300029944	Palsa	MLQGMFGKRLAEHFSLLESSSLVLGPKGNSQVALTRMRMPNGFPGPTPHIPPEKAFSVSVHLRRPDSVKGWGTWLDGR
Ga0311371_101621793	3300029951	Palsa	MLEGMFGQKLVQHFSLPVSSSLVLRPTANTQIAMTRMTMPNGFPGPTPHITPEKAYS
Ga0311371_108878461	3300029951	Palsa	MLQGMFGKRLAQHFSLLESSSLVLGPKGNSQVALTRMRMPNGFPGPTPHIPPEKAFSISV
Ga0302304_100871773	3300029993	Palsa	MLQGMFGKRLAEHFSLLESSSLVLGPKGNSQVALTRMRMPNGFPGPTPHIPPEKALSISVHL
Ga0311339_114025951	3300029999	Palsa	MLHGMFGQSLAAHFSLLESSSIVLGPEGKSQVALTRMRVPNGFPGPTPHI
Ga0311339_116437761	3300029999	Palsa	MLQGMFGKRLAEHFSLLESSSLVFGPKGNSQVALTRMRMPNGFPGPTPHIPPEKA
Ga0302300_12146031	3300030042	Palsa	MLQGMFGKRLAEHFSLLESSSLVLGPKGNSQVALTRMRMPNGFPRPTPHIPPEKAFS
Ga0302181_104371411	3300030056	Palsa	MLQGMFGKRLAEHFSLLESSSLVLGPKGNSQVALTRMRMPNGFPRPTPHIPPEKA
Ga0302176_104675392	3300030057	Palsa	MLQGMFGKRLAEHFSLLESSSLVLGPKGNSQVALTRMRMPNGFPGPTPHIPPEKAFSVSVHLRRPDSVKGWGTWLDGRFHR
Ga0302179_102900822	3300030058	Palsa	MLQGMFGKRLAEHFSLLESSSLVLGPKGNSQVALTRMRMPNGFPGPTPHIPPEKAFSVSVHLRRPDSVKGWGTWLD
Ga0302179_103558502	3300030058	Palsa	MLHGMFGQSLAAHFSLLESSSIVLGPEGKSQVALTRMRVPNGFPGPTPHIAAEKAFSVSVHLRRPESIKGWGTWLDGRFHHVT
Ga0311353_109245061	3300030399	Palsa	MLQGMFGKRLAEHFSLPESSSIVFGPKGNSQVALTRMRMPNGFPGPTPHIPPEKAFSI
Ga0311353_113695071	3300030399	Palsa	MLQGMFGKRLAEHFSLLESSSLVFGLKGNSQVALTRMRMPNGFPGPTPHIPPEKAF
Ga0311370_1003477410	3300030503	Palsa	MLQGMFGKRLAEHFSLLESSSLVLGPKGNSQVALTRMRMPNGFPGPTPHIPPEKAFSVSVHLRRP
Ga0311354_102251121	3300030618	Palsa	MLQGMFGKRLAEHFSLLESSSLVFGLKGNSQVALTRMRMPNGFPGPTPHIP
Ga0311354_104158571	3300030618	Palsa	MLQGMFGKRLAEHFSLLESSSLVLGPKGTSQVALTRMRMPNGFPGPTPHIPPEKAFSISVHLRRPDSIK
Ga0302309_105137792	3300030687	Palsa	MLHGMFGKRLAEHFSLPESSSIVFGPKGNSQVALTRMRMPNGFPGPTPHIPPEKAF
Ga0302313_100120581	3300030693	Palsa	MLEGMFGQKLVQHFFLPVSSSLVLRPTANTQIAMTRMTMPNGFPGPTPHITPEKAYSISVHLRRPLSVKGWGTWLDG
Ga0265746_10200142	3300030815	Soil	MLQGMFGKRLAEHFSLLESSSLVLGPKGNSQVALTRMRMPNGFPGPTPPSPPEK
Ga0265721_10055572	3300030977	Soil	MLQGMFGKRLAEHFSLLESFSLVLGLKGNSQVALTRMRMPNGFPGPTPHIPPE
Ga0265760_101384181	3300031090	Soil	MLQGMFGKRLAEHFSLLESSSLVLGPKGNLQVALTRMRMPNGFPGPTPHIPPEKAFSISVHLRR
Ga0265760_101617762	3300031090	Soil	MLQGMFGKRLVEHFSLLESSSLVFGLKGNSQVALTRMRMPNGFPGPTPHIPPEKAFSISVHLRRPDS
Ga0302307_102858481	3300031233	Palsa	MLQGMFGRKLAEHFSLLESSSIVLGPEGKTQVALTRMRMPNGFPGPTPHIPPEKAFSV
Ga0302325_118324521	3300031234	Palsa	MLHGMFGQSLAAHFSLLESSSIVLGPEGKSQVALTRMRVPNGFPGPTPHIA
Ga0302325_130744461	3300031234	Palsa	MLHGMFGPKLAQHFSLPRSSSLLLRPEPNTPIAMTRMTMPNGFPGPTPHIPPEKAYSISVHLRRPVSVKGWG
Ga0302324_1035270382	3300031236	Palsa	MLQGMFGKRLAEHFSLLESSSLVLGPGGNSQVALTRMRMPNGFPGPTPHIPPEKAF
Ga0302315_106809091	3300031837	Palsa	MLQGMFGRKLAEHFSLLESSSIVLGPEGKTQVALTRMRMPNGFPGPTPHIPPEKAFSVSVHLRRPNSIKGWG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085914

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences