Metagenome / Metatranscriptome Family F085994

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085994
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	66 residues
Representative Sequence	SVKVVDGTGEKGFDVSVDRKVYTADGKLLRSDTFRSHYIPDSPTTVYGPGKTPPGPYIVLPSTI
Number of Associated Samples	103
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	6.31 %
% of genes near scaffold ends (potentially truncated)	92.79 %
% of genes from short scaffolds (< 2000 bps)	92.79 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.198 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost (11.712 % of family members)
Environment Ontology (ENVO)	Unclassified (33.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.946 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 22.83% Coil/Unstructured: 77.17%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF03641	Lysine_decarbox	71.17
PF02163	Peptidase_M50	1.80
PF02597	ThiS	1.80
PF04294	VanW	1.80
PF03401	TctC	0.90
PF13414	TPR_11	0.90
PF02391	MoaE	0.90
PF00202	Aminotran_3	0.90
PF07676	PD40	0.90
PF00990	GGDEF	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG1611	Nucleotide monophosphate nucleosidase PpnN/YdgH, Lonely Guy (LOG) family	Nucleotide transport and metabolism [F]	71.17
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	1.80
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	1.80
COG2720	Vancomycin resistance protein YoaR (function unknown), contains peptidoglycan-binding and VanW domains	Defense mechanisms [V]	1.80
COG0314	Molybdopterin synthase catalytic subunit MoaE	Coenzyme transport and metabolism [H]	0.90
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.20 %
Unclassified	root	N/A	1.80 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.20 %
Unclassified	root	N/A	1.80 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.20 %
Unclassified	root	N/A	1.80 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	70.27 %
Unclassified	root	N/A	1.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	63.06 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	6.31 %
Unclassified	root	N/A	1.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5.41 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	1.80 %
Unclassified	root	N/A	1.80 %
Nitriliruptoria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria	0.90 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.90 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.90 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	4.50 %
Kallotenuales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Kallotenuales	1.80 %
Unclassified	root	N/A	1.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.90 %
Egibacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Egibacterales	0.90 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.90 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.50 %
Kallotenuaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Kallotenuales → Kallotenuaceae	1.80 %
Unclassified	root	N/A	1.80 %
Egibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Egibacterales → Egibacteraceae	0.90 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.90 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.90 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.50 %
Kallotenue	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Kallotenuales → Kallotenuaceae → Kallotenue	1.80 %
Unclassified	root	N/A	1.80 %
Egibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Egibacterales → Egibacteraceae → Egibacter	0.90 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.90 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.90 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.50 %
Kallotenue papyrolyticum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Kallotenuales → Kallotenuaceae → Kallotenue → Kallotenue papyrolyticum	1.80 %
Unclassified	root	N/A	1.80 %
Egibacter rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Egibacterales → Egibacteraceae → Egibacter → Egibacter rhizosphaerae	0.90 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.90 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.90 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090003\|LJN_F7QKVOU01D8AAD	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	508	Open in IMG/M
2166559005\|cont_contig31601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1053	Open in IMG/M
2170459007\|GJE5RH003GATMT	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	520	Open in IMG/M
2170459010\|GIO7OMY01CZYB7	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	516	Open in IMG/M
2199352024\|deeps__Contig_187996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	690	Open in IMG/M
3300000878\|AL9A1W_1411038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	542	Open in IMG/M
3300001532\|A20PFW1_1014272	Not Available	2777	Open in IMG/M
3300001536\|A1565W1_10869099	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300001537\|A2065W1_11872377	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300001538\|A10PFW1_11960213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1810	Open in IMG/M
3300004081\|Ga0063454_101511173	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300004479\|Ga0062595_100860651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	757	Open in IMG/M
3300004479\|Ga0062595_101465005	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300005179\|Ga0066684_10519201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	799	Open in IMG/M
3300005187\|Ga0066675_10603381	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300005329\|Ga0070683_101000962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	802	Open in IMG/M
3300005341\|Ga0070691_10478569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	716	Open in IMG/M
3300005344\|Ga0070661_100480090	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300005434\|Ga0070709_11462351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	554	Open in IMG/M
3300005435\|Ga0070714_101245354	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300005436\|Ga0070713_100228336	All Organisms → cellular organisms → Bacteria	1691	Open in IMG/M
3300005439\|Ga0070711_101768914	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300005439\|Ga0070711_101844669	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300005454\|Ga0066687_10651135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	626	Open in IMG/M
3300005456\|Ga0070678_100960083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	784	Open in IMG/M
3300005526\|Ga0073909_10594376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Kallotenuales → Kallotenuaceae → Kallotenue → Kallotenue papyrolyticum	546	Open in IMG/M
3300005534\|Ga0070735_10100202	All Organisms → cellular organisms → Bacteria	1825	Open in IMG/M
3300005539\|Ga0068853_100140526	All Organisms → cellular organisms → Bacteria	2167	Open in IMG/M
3300005539\|Ga0068853_100154856	All Organisms → cellular organisms → Bacteria	2065	Open in IMG/M
3300005539\|Ga0068853_102238018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Kallotenuales → Kallotenuaceae → Kallotenue → Kallotenue papyrolyticum	530	Open in IMG/M
3300005544\|Ga0070686_101292577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	609	Open in IMG/M
3300005560\|Ga0066670_10950259	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300005614\|Ga0068856_102173171	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300005616\|Ga0068852_100391632	All Organisms → cellular organisms → Bacteria	1365	Open in IMG/M
3300005764\|Ga0066903_103483424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	848	Open in IMG/M
3300006028\|Ga0070717_12117491	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300006175\|Ga0070712_100340169	All Organisms → cellular organisms → Bacteria	1225	Open in IMG/M
3300006358\|Ga0068871_100848871	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300006804\|Ga0079221_11542435	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300006806\|Ga0079220_10198584	All Organisms → cellular organisms → Bacteria	1156	Open in IMG/M
3300009012\|Ga0066710_103728623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	573	Open in IMG/M
3300009137\|Ga0066709_102548103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	687	Open in IMG/M
3300009174\|Ga0105241_10064854	All Organisms → cellular organisms → Bacteria	2821	Open in IMG/M
3300009551\|Ga0105238_10429053	All Organisms → cellular organisms → Bacteria	1317	Open in IMG/M
3300010373\|Ga0134128_10324247	All Organisms → cellular organisms → Bacteria	1723	Open in IMG/M
3300010396\|Ga0134126_12527681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	558	Open in IMG/M
3300011992\|Ga0120146_1069148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	572	Open in IMG/M
3300012011\|Ga0120152_1029255	All Organisms → cellular organisms → Bacteria	1969	Open in IMG/M
3300012014\|Ga0120159_1180057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	571	Open in IMG/M
3300012096\|Ga0137389_11252464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	635	Open in IMG/M
3300012200\|Ga0137382_10874651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	648	Open in IMG/M
3300012204\|Ga0137374_11191590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	534	Open in IMG/M
3300012357\|Ga0137384_11283595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	579	Open in IMG/M
3300012357\|Ga0137384_11569697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	508	Open in IMG/M
3300012362\|Ga0137361_11332087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	642	Open in IMG/M
3300012922\|Ga0137394_11576204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	514	Open in IMG/M
3300012955\|Ga0164298_10705323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	708	Open in IMG/M
3300012957\|Ga0164303_10998586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	595	Open in IMG/M
3300012961\|Ga0164302_10184812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1266	Open in IMG/M
3300012971\|Ga0126369_12024020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	664	Open in IMG/M
3300012986\|Ga0164304_11413356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	572	Open in IMG/M
3300013297\|Ga0157378_11652631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	687	Open in IMG/M
3300013307\|Ga0157372_12020021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	662	Open in IMG/M
3300013763\|Ga0120179_1108384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	612	Open in IMG/M
3300013772\|Ga0120158_10247679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	893	Open in IMG/M
3300013772\|Ga0120158_10485081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	548	Open in IMG/M
3300014058\|Ga0120149_1174413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	597	Open in IMG/M
3300014325\|Ga0163163_12006714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	638	Open in IMG/M
3300014827\|Ga0120171_1041954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1475	Open in IMG/M
3300015245\|Ga0137409_10110858	All Organisms → cellular organisms → Bacteria	2537	Open in IMG/M
3300015264\|Ga0137403_11441130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	538	Open in IMG/M
3300015371\|Ga0132258_11006651	All Organisms → cellular organisms → Bacteria	2106	Open in IMG/M
3300016341\|Ga0182035_10570569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	975	Open in IMG/M
3300016341\|Ga0182035_11131182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	697	Open in IMG/M
3300018060\|Ga0187765_11097712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	552	Open in IMG/M
3300018482\|Ga0066669_11607574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	593	Open in IMG/M
3300020069\|Ga0197907_10799136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	889	Open in IMG/M
3300020081\|Ga0206354_11502204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1063	Open in IMG/M
3300020610\|Ga0154015_1509818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	680	Open in IMG/M
3300021363\|Ga0193699_10418741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	554	Open in IMG/M
3300024187\|Ga0247672_1070049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	596	Open in IMG/M
3300025905\|Ga0207685_10827319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	511	Open in IMG/M
3300025908\|Ga0207643_11044878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	528	Open in IMG/M
3300025912\|Ga0207707_10118698	All Organisms → cellular organisms → Bacteria	2312	Open in IMG/M
3300025914\|Ga0207671_10909456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	696	Open in IMG/M
3300025915\|Ga0207693_10290685	All Organisms → cellular organisms → Bacteria	1281	Open in IMG/M
3300025915\|Ga0207693_11351097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Egibacterales → Egibacteraceae → Egibacter → Egibacter rhizosphaerae	531	Open in IMG/M
3300025916\|Ga0207663_11505924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	542	Open in IMG/M
3300025920\|Ga0207649_10895818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	695	Open in IMG/M
3300025924\|Ga0207694_11599296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549	Open in IMG/M
3300025934\|Ga0207686_10018205	All Organisms → cellular organisms → Bacteria	3973	Open in IMG/M
3300025938\|Ga0207704_11047136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	692	Open in IMG/M
3300025941\|Ga0207711_10852958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	847	Open in IMG/M
3300025949\|Ga0207667_11078651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	787	Open in IMG/M
3300026078\|Ga0207702_11409215	Not Available	691	Open in IMG/M
3300027908\|Ga0209006_11205196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	591	Open in IMG/M
3300031231\|Ga0170824_109974775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	642	Open in IMG/M
3300031561\|Ga0318528_10402520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	735	Open in IMG/M
3300031711\|Ga0265314_10466759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	670	Open in IMG/M
3300031712\|Ga0265342_10528700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	600	Open in IMG/M
3300031771\|Ga0318546_10854962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	640	Open in IMG/M
3300031780\|Ga0318508_1207649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	561	Open in IMG/M
3300031782\|Ga0318552_10285821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	838	Open in IMG/M
3300031795\|Ga0318557_10282784	All Organisms → cellular organisms → Bacteria → Terrabacteria group	761	Open in IMG/M
3300031832\|Ga0318499_10147672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	917	Open in IMG/M
3300031893\|Ga0318536_10566398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	569	Open in IMG/M
3300031912\|Ga0306921_11448476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	753	Open in IMG/M
3300031996\|Ga0308176_12857451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	513	Open in IMG/M
3300032059\|Ga0318533_11203943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	554	Open in IMG/M
3300032074\|Ga0308173_12261929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	513	Open in IMG/M
3300034195\|Ga0370501_0215845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	679	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.68%
Host-Associated	Host-Associated	23.42%
Engineered	Engineered	0.90%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.68%
Plants	Host-Associated → Plants	23.42%
Modeled	Engineered → Modeled	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.68%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.81%
Roots	Host-Associated → Plants → Roots	1.80%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.66%
Loam	Environmental → Terrestrial → Soil → Loam	16.22%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.21%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.60%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.80%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.80%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.90%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.51%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	11.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.71%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.11%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.21%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.60%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.80%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.80%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.90%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	11.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.91%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.11%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	6.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.70%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.80%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.80%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.80%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.90%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.90%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.90%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.90%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.90%
Quercus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Quercus Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.90%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090003	Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN	Host-Associated	Open in IMG/M
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
2170459007	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 10-21cm	Environmental	Open in IMG/M
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300000878	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-5 cm-9A)- 1 week illumina	Environmental	Open in IMG/M
3300001532	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-PF 12A)- 1 week illumina	Environmental	Open in IMG/M
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300001537	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-65 cm-11A)- 1 week illumina	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011992	Permafrost microbial communities from Nunavut, Canada - A23_65cm_12M	Environmental	Open in IMG/M
3300012011	Permafrost microbial communities from Nunavut, Canada - A30_65cm_6M	Environmental	Open in IMG/M
3300012014	Permafrost microbial communities from Nunavut, Canada - A10_80cm_6M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013763	Permafrost microbial communities from Nunavut, Canada - A15_65cm_0M	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014058	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25M	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014827	Permafrost microbial communities from Nunavut, Canada - A3_80cm_18M	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020610	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300024187	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK13	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031712	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG	Host-Associated	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LJN_02448650	2088090003	Quercus Rhizosphere	QTKWTGPSMNYAVDPNAPRGSAKVVNGTGEKGFDVSVDRTVYDASGKELRHDTFRSHYIPDSPTTVYGPGRTPPGPYIVLPTHF
cont_0601.00002600	2166559005	Simulated	RSVKVVKGSGELGFDVTVTRQVYDASGKLLRHDTFRSHYIPDSPTTVYGPGRTPPGPYIVIPTTI
L02_04438740	2170459007	Grass Soil	PEGRRIVSHTGPQVNWKKPSMNYAVDPNAKRRSVKVVQGSGELGFDVTVTRQVYDASGKLLRHDTFRSHYIPDSPTTVYGPGRTPPGPYIVIPSSA
F62_07997870	2170459010	Grass Soil	PNAPRRSVKVVAGSGELGFDVTVTRQVYDASGKLLRHDTFRSHYIPDSPTTVYGPGRTPPGSYIVIPTTI
deeps_03553720	2199352024	Soil	VSVDRTVYDASGKELRHDTFKSHYIPDSPTTVYGPGRTPPGPYIVLPSHI
AL9A1W_14110382	3300000878	Permafrost	GSVKVVPGTGEQGFDVTVGRKVYDASGKLLRANTFRSHYIPDSPTTVYGPGKTPPGPYIVIPSTI*
A20PFW1_10142725	3300001532	Permafrost	TGELGFDVTVDRTVYDKDGKKLRSDVFKSHYIPDSPTTVYGPGRTPPGPYIVLPSKI*
A1565W1_108690992	3300001536	Permafrost	MNYAVDPRAPRRSVKVVPGTGEQGFDVTVGRKVYDASGKLLRANTFRSHYIPDSPTTVYGPGKTPPGPYIVIPSTI*
A2065W1_118723772	3300001537	Permafrost	VTVKRAVYDRHGKLLRRDSFPSRYVPEGPTTVYGPGRTPPGPYVVIPPH*
A10PFW1_119602135	3300001538	Permafrost	VDPRAPRKSVKVVKGTGELGFDVTVTRDVYDRSGKLLRHNVFKSHYIPDSPTTVYGPGKKPPGPYIVLPTTI*
Ga0063454_1015111731	3300004081	Soil	GSVKVVQGTGEKGFDVSVDRTVFDAGGKELRHDVFRSHYIPDSPTTVYGPGKTPPGPYIVLPSQI*
Ga0062595_1008606512	3300004479	Soil	EKGFDVAVERTVYDATGRELRHNVFQSHYIPDSPTTVYGPGRTPPGPYIVLPSTV*
Ga0062595_1014650051	3300004479	Soil	PNAPRGSAKVVSGTGEKGFDVTVDRTVYDASGKELRHDTFKSHYIPDSPTTVYGPGRTPPGPYIVLPSSI*
Ga0066684_105192011	3300005179	Soil	VQRTVYGGDGKVLRRDHFVSAYIPDSPTTVYGPGRRPPGPYFVLPSRA*
Ga0066675_106033811	3300005187	Soil	STLTFTFYGTPQGRRVVAATGPKADWRGPSMNYAIDPSRPAGSVEVVRGSGELGFNVSVHRTVFEQGKTLREDTFVSHYIPDSPTTVYGPGAHPPGPYIVLPART*
Ga0070683_1010009621	3300005329	Corn Rhizosphere	TGTGEQGFDIQVWRKVYDRNGKLLRSNVFKSHYIPDSPTTVYGPGRTPPGPYIVLPTTT*
Ga0070691_104785691	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	KVVAGTGEKGFDVSVTRDVYDASGKLLRHDDFRSHYIPDSPTTVYGPGKTPPGPYIVIPATI*
Ga0070661_1004800902	3300005344	Corn Rhizosphere	RGSVKVVTGTGEQGFDIQVWRKVYDRNGKLLRSNVFKSHYIPDSPTTVYGPGRTPPGPYIVLPTTT*
Ga0070709_114623511	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	FDIVVDRKVYNRRGKLLRSDVFKSHYIPDSSTTVYGPGRTPPGPYIVLPTTA*
Ga0070714_1012453541	3300005435	Agricultural Soil	GFDVTVTRKVFDADGKLLRSDSFKSHYIPDSSTTVYGPGRTPPSPYIVLPTTA*
Ga0070713_1002283363	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	PSMNYAVDPNAPHGSVKVVPGTGEKGFDVTVDRTVYAANGKRLRHDTFKSHYIPDSPTTVYGPGKTPPGPYIVIPTTL*
Ga0070711_1017689141	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	QTNWTHPGMNYAVDPTAPHGSVRVVSGTGELGFDIVVDRKVYNRRGKLLRSDVFKSHYIPDSSTTVYGPGRTPPSPYIVLPTTA*
Ga0070711_1018446691	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MNYAVDPNAPRGSAKVVSGTGEKGFDVTVDRTVYASSGAELRHDTFRSHYIPDSPTTVYGPGRTPPGPYIVLPSSI*
Ga0066687_106511352	3300005454	Soil	SMNYAVDPNAPRRSVKVVNGSGELGFDVTVTRQVYDASGKLLRHDTFRSHYIPDSPTTVYGPGRTPPGPYIVLPSSV*
Ga0070678_1009600832	3300005456	Miscanthus Rhizosphere	GSVKVVAGTGEKGFDVSVDRKVYTAAGKLLRSDTFRSHYIPDSPTTVYGPGKTPPGPYIVLPSSV*
Ga0073909_105943761	3300005526	Surface Soil	GEKGFDVSVDRKVYTADGKLLRSDTFRSHYIPDSPTTVYGPGKTPPGPYIVLPSSI*
Ga0070735_101002024	3300005534	Surface Soil	GMNYAIDPNAPRGSKRVVAGSGELGFDVTVARSVYAKSGKLLRHDVFKSHYIPDSSTTVYGPGAHPPGPYIVLPTSL*
Ga0068853_1001405264	3300005539	Corn Rhizosphere	GEQGFDIQVWRKVYDRNGKLLRSNVFRSHYIPDSPTTVYGPGRTPPGPYIVLPTTT*
Ga0068853_1001548564	3300005539	Corn Rhizosphere	WRKVYDRNGKLLRSNVFKSHYIPDSPTTVYGPGRTPPGPYIVLPTTT*
Ga0068853_1022380181	3300005539	Corn Rhizosphere	VDGTGEKGFDVTVERTVYVAAGKELRHDVFKSHYIPDSPTTVYGPGRTPPGPYIVLPTHI
Ga0070686_1012925771	3300005544	Switchgrass Rhizosphere	VERTVYDATGRELRHNVFQSHYIPDSPTTVYGPGRTPPGPYIVLPSTV*
Ga0066670_109502592	3300005560	Soil	AIDPSAPAGSVRVVSGTGEQGFDVSVTRDVYDRSGKLLRHNEFKSHYIPDSPTTVYGPGRTPPGPYIVLPSTT*
Ga0068856_1021731711	3300005614	Corn Rhizosphere	RGSAKVVKGTGEKGFDVSVDRTVYDAGGKELRHDTFKSHYIPDSPTTVYGPGRTPPGPYIVLPSHI*
Ga0068852_1003916323	3300005616	Corn Rhizosphere	TGEQGFDIQVWRKVYDRNGKLLRSNLFKSHYIPDSPTTVYGPGRTPPGPYIVLPTTT*
Ga0066903_1034834242	3300005764	Tropical Forest Soil	GEQGFDIQVWRRVYAKNGKLIRKDDFKSHYIPDSPTTVYGPGRTPPGPYFVLPSSV*
Ga0070717_121174911	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	TGPSMNYALDPNAPPRSKKVVAGTGEQGFDVTVTRTVYTAAGKELRHNVFRSHYIPDSPTTVYGPGQSVPTPYIVLPSVT*
Ga0070712_1003401693	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	GELGFDVTVDRKVYAADGKLIRTDSFRSHYIPDSSTTVYGPGRTPPGPYFVLPSSV*
Ga0068871_1008488712	3300006358	Miscanthus Rhizosphere	GFDVSVDRKVYTADGKLLRSDTFRSHYIPDSPTTVYGPGKTPPGPYIVLPSTI*
Ga0079221_115424352	3300006804	Agricultural Soil	VDPTAPHGSVRVVSGTGELGFDIVVDRKVYNRRGKLLRSDVFKSHYIPDSSTTVYGPGRTPPGPYIVLPTTA*
Ga0079220_101985841	3300006806	Agricultural Soil	RVVTGTGEQGFDIEVWRKVYDRNGKLLRSNVFKSHYIPDSPTTVYGPGRTPPGPYIVLPTTT*
Ga0066710_1037286231	3300009012	Grasslands Soil	RTGEKGFDVSVTRTVYDAHGKQLRHDVFRSHYIPDSPTTVYGPGKRPPGPYIVLPKTV
Ga0066709_1025481031	3300009137	Grasslands Soil	MNYAVDLSAPRNSVRVVPGTGELGFDVTVDRKVYASSGKLIRRDTFKSHYIPDSSTTVYGPGRKPPGPYFVLPTSL*
Ga0105241_100648541	3300009174	Corn Rhizosphere	TGEQGFDIQVWRKVYDRNGKLLRSNVFRSHYIPDSPTTVYGPGRTPPGPYIVLPTTT*
Ga0105238_104290533	3300009551	Corn Rhizosphere	GSAKVVKGTGEKGFDVSVDRTVYDAGGKELRHDTFKSHYIPDSPTTVYGPGRTPPGPYIVLPSHI*
Ga0134128_103242474	3300010373	Terrestrial Soil	EVWRKVYDRNGKLLRSNVFKSHYIPDSPTTVYGPGRTPPGPYIVLPTTT*
Ga0134126_125276811	3300010396	Terrestrial Soil	TVRRDVYTRAGKLLRHDVFKSRYIPDSSTAVYGPGRRPPGPYFVLPSSV*
Ga0120146_10691481	3300011992	Permafrost	VKVVAGTGEKGFDVSVDRTVYDASGKELRHDTFKSHYIPDSPTTVYGPGRTPAGPYIVLPSHI*
Ga0120152_10292551	3300012011	Permafrost	GELGFDVNVDRKVYDKDGKKLRSDVFKSHYIPDSPTTVYGPGKTPPRPYIVLPTTV*
Ga0120159_11800572	3300012014	Permafrost	NYAVDPRAPRKSVKVVKGTGELGFDVTVTRDVYDRSGKLLRHNVFKSHYIPDSPTTVYGPGKKPPGPYIVLPSTI*
Ga0137389_112524642	3300012096	Vadose Zone Soil	KWTGPTMNYAVDPNAPRGSAKVVAGTGELGFDVTVDRTVYGKNGKKLRHDVFRSHYIPDSPTTVYGPGRTPAGPYIVLPTSI*
Ga0137382_108746511	3300012200	Vadose Zone Soil	RGSVKVVSGTGEKGFDVSVERTVYSASGKQLRHDTFKSHYIPDSPTTVYGPGKTPPGPYIVLPSTL*
Ga0137374_111915902	3300012204	Vadose Zone Soil	AGFQVTVKRTVLDRRGKVMRRDSFLSTYSPQGPTTVYGPGRTPPGSYIVLPRDP*
Ga0137384_112835952	3300012357	Vadose Zone Soil	GAQGFDLTVKRTVYDRKGKILRRDSFFSRYVPDGPTTVYGPGRTPPGPYIVIPPH*
Ga0137384_115696971	3300012357	Vadose Zone Soil	PQTKWTHPGMNYAVDPSAPRGSFRVVPGSCELGFDVTVIRKVYGANGKLLENDAFKSHYIPDSSTTVYGPGKKPPGPYFVIPSTL*
Ga0137361_113320872	3300012362	Vadose Zone Soil	SVEIVSGSGEPGFNVTVRRTVYEHGRVLRNDTFVSHYIPDSPTTVYGPGRKPPGPYIVLPSHV*
Ga0137394_115762042	3300012922	Vadose Zone Soil	VKGTGEKGFDVSVERTVFDAAGKELRRDTFRSHYIPDSPTKVYGPGKKPPGPYIVLPSTI
Ga0164298_107053231	3300012955	Soil	QTRWTSPTMNYAVDPRAPRASVKVVAGTGEQGFDVTVDRTVYDASGKLLRKDTLRSHYIPDSPTTVYGPGKNPPGPYIVLPSTV*
Ga0164303_109985862	3300012957	Soil	SVKVVAGTGEKGFDVAVTRDVYDASGKLLRHDDFRSHYIPDSPTTVYGPGKTPPGPYIVLPSSI*
Ga0164302_101848122	3300012961	Soil	YGAPEGRRVVSKTGPQTNWTHPGMNYAVDPTAPHGSVRVVSGTGELGFDIVVDRKVYNRRGKLLRSDVFKSHYIPDSSTTVYGPGRTPPSPYIVLPTTA*
Ga0126369_120240201	3300012971	Tropical Forest Soil	YAVDPNAAHGSVKVVAGTGEKGFDVTVDRTVYDVSGAELRHDVFKSHYIPDSPTTVYGPGRTPPGPYIVLPSSV*
Ga0164304_114133561	3300012986	Soil	TGELGFDVTVDRKVYAADGKLIRSDSFRSHYIPDSSTTVYGPGRTPPGPYFVLPSSV*
Ga0157378_116526311	3300013297	Miscanthus Rhizosphere	ELGFDVTVDRKVYAADGKLIRTDSFRSHYIPDSSTTVYGPGRTPPGPYFVLPSSV*
Ga0157372_120200211	3300013307	Corn Rhizosphere	GSVRVVTGTGEQGFDIEVWRKVYDRNGKLLRSNVFKSHYIPDSPTTVYGPGRTPPGPYIVLPTTT*
Ga0120179_11083841	3300013763	Permafrost	SAKVVQGTGEKGFDVSVDRTVYDASGKELRHDTFKSHYIPDSPTTVYGPGRTPAGPYIVLPSHI*
Ga0120158_102476792	3300013772	Permafrost	FDANVERTVYDKDGKKLRSDVFKSHYIPDSPTTVYGPGRTPPGPYIVLPTSI*
Ga0120158_104850811	3300013772	Permafrost	NEHRRVVATTSSQTKWTGPSMNYAIDPNAPRRSAKVVQGTGEKGFDVSVDRTVYDASGKELRHDTFKSHYIPDSPTTVYGPGRTPAGPYIVLPSHI*
Ga0120149_11744132	3300014058	Permafrost	HRRVVATTGPQTNWRGPSMNYAVDPRAPRRSVKVVPGTGEQGFDVTVGRKVYDASGKLLRANTFRSHYIPDSPTTVYGPGKTPPGPYIVIPSTI*
Ga0163163_120067141	3300014325	Switchgrass Rhizosphere	VKVVSGTGEQGFDIQVWRKVYDRNGKLLRSNLFKSHYIPDSPTTVYGPGRTPPGPYIVLPTTT*
Ga0120171_10419542	3300014827	Permafrost	MNYAIDPNAPRRSAKVVTGTGELGFDVTVDRTVYDKDGKKLRSDVFKSHYIPDSPTTVYGPGRTPPGPYIVLPSKI*
Ga0137409_101108582	3300015245	Vadose Zone Soil	LLAPPRAGEKGFDVSVERTVFDAAGKELRRDTFRSHYIPDSPTKVYGPGKKPPGPYIVLPSTI*
Ga0137403_114411301	3300015264	Vadose Zone Soil	GFDVTVGRKVYDAHGKLLRTDTFRSHYIPDSPTTVYGPGKKPPGPYIILPSSI*
Ga0132258_110066514	3300015371	Arabidopsis Rhizosphere	LSYAVDPNAPRDSVKVVPGTGELGFDVAVSRDVYSKAGNLIRHDVFKSHYIPDSSTAVYGPGHTPPGPYFVLPSSV*
Ga0182035_105705692	3300016341	Soil	GPQTNWTKPTMNYAVDPNARHGSVHVVAGSGELGFDVTVTRDVYARDGKRLRHDVFKSHYIPDSPTTVYGPGKTPPGPYIVIPSTT
Ga0182035_111311822	3300016341	Soil	VTRDVYDAGGRLIRHDVFKSHYIPDSPTTVYGPGRKPPGPYIVLPSAT
Ga0187765_110977122	3300018060	Tropical Peatland	DLTAPRDSVRVVPGTGELGFDVTVYRTVYSRAGNVIRRDRFKSHYIPDSPTTVYGPGLKPPGPYFVLPTST
Ga0066669_116075741	3300018482	Grasslands Soil	VSVDRTVYDADGNELRRNLFQSHYIPDSPTTVYGPGKTPPGPYIVLPSTV
Ga0197907_107991361	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	KGFDVSVTRDVYDASGKLLRHDDFRSHYIPDSPTTVYGPGKTPPGPYIVIPATI
Ga0206354_115022041	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	VKVVTGTGEQGFDIQVWRKVYDRSGKLLRSNVFKSHYIPDSPTTVDGPGRTPPGPYIVLPTTT
Ga0154015_15098182	3300020610	Corn, Switchgrass And Miscanthus Rhizosphere	VKGTGEQGFDIQVWRKVYDRNGKLLRSNLFKSHYIPDSPTTVYGPGRTPPGPYIVLPTTT
Ga0193699_104187412	3300021363	Soil	RVVAKTSSQTKWTGPSMNYAIDPNAPRGSAKVVKGTGEKGFDVSVDRTVYDAGGKELRHDTFKSHYIPDSPTTVYGPGRKPPGPYIVLPSHI
Ga0247672_10700492	3300024187	Soil	LGFDIIVERKVYDRRGKLLRSDVFKSHYIPDSATTVYGPGRTPPGPYIVLPTTA
Ga0207685_108273191	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	VSHTGAQTNWTSPGMNYAVDPNAPRGSAKVVSGTGEKGFDVTVDRTVYASSGAELRHDTFRSHYIPDSPTTVYGPGRTPPGPYIVLPSSI
Ga0207643_110448781	3300025908	Miscanthus Rhizosphere	PHGSVRVVSGTGELGFDIVVDRKVYNRRGKLLRSDVFKSHYIPDSSTTVYGPGRTPPGPYIVLPTTA
Ga0207707_101186981	3300025912	Corn Rhizosphere	IQVWRKVYDRNGKLLRSNVFKSHYIPDSPTTVYGPGRTPPGPYIVLPTTT
Ga0207671_109094561	3300025914	Corn Rhizosphere	RGSVRVVTGTGEQGFDIEVWRKVYDRNGKLLRSNVFKSHYIPDSPTTVYGPGRTPPGPYIVLPTTT
Ga0207693_102906851	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	GELGFDVTVDRKVYAADGKLIRTDSFRSHYIPDSSTTVYGPGRTPPGPYFVLPSSV
Ga0207693_113510972	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	GTGELGFDIVVDRKVYNRRGKLLRSDVFKSHYIPDSSTTVYGPGRTPPGPYIVLPTTA
Ga0207663_115059241	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	QTNWTHPGMNYAVDPTAPHGSVRVVSGTGELGFDIVVDRKVYNRRGKLLRSDVFKSHYIPDSSTTVYGPGRTPPSPYIVLPTTA
Ga0207649_108958181	3300025920	Corn Rhizosphere	FDVEVTRKVYDRDGKLLQDDVFKSHYIPDSPTTVYGPGGKPPGPYIVLPSTT
Ga0207694_115992962	3300025924	Corn Rhizosphere	QGFDIQVWRKVYDRNGKLLRSNLFKSHYIPDSPTTVYGPGRTPPGPYIVLPTTT
Ga0207686_100182055	3300025934	Miscanthus Rhizosphere	RGSVRVVTGTGEKGFDVTVERTVYDATGRELRHNVFQSHYIPDSPTTVYGPGRTPPGPYIVLPSTV
Ga0207704_110471362	3300025938	Miscanthus Rhizosphere	HGSVRVVSGTGELGFDIVVDRKVYNRRGKLLRSDVFKSHYIPDSPTTVYGPGKTPPGPYIVLPSTI
Ga0207711_108529581	3300025941	Switchgrass Rhizosphere	SVKVVDGTGEKGFDVSVDRKVYTADGKLLRSDTFRSHYIPDSPTTVYGPGKTPPGPYIVLPSTI
Ga0207667_110786511	3300025949	Corn Rhizosphere	FDVSVTRDVYDASGKLLRHDDFRSHYIPDSPTTVYGPGKTPPGPYIVIPATI
Ga0207702_114092152	3300026078	Corn Rhizosphere	FDVSVDRTVYDAGGKELRHDTFKSHYIPDSPTTVYGPGRTPPGPYIVLPSHI
Ga0209006_112051962	3300027908	Forest Soil	WTRPGLNYAVDLSARPNSVHVVPGSGELGFDVSVTRTVYNKAGKVIRHAVFKSRYIPDSSTAVYGPGKKPPGPYFVLPPT
Ga0170824_1099747751	3300031231	Forest Soil	PRAPTGSVKVVAGTGEQGFDVTVGRKVYDARGKLLQSNTFRSHYIPDSPTTVYGPGRTPPGPYIVIPSTI
Ga0318528_104025202	3300031561	Soil	SRTGPQVNWTQPRLTYAVDPNAPRGSMKVVPGSGELGFDVTVTRDVYTRDGKLLRHNVFKSHYIPDSPTAVYGPGRTPPGPYFVIPSSV
Ga0265314_104667592	3300031711	Rhizosphere	DLRARPKSVRVVSGSGELGFDVTVTRTVYTKDGKVLRHNTFKSHYIPDSSTAIYGPGKRPPGPYFVLPST
Ga0265342_105287002	3300031712	Rhizosphere	FDITVTRTVFDKAGKVLRHNTFKSRYIPDSSTAIYGPGKRPPGPYFVLPPA
Ga0318546_108549622	3300031771	Soil	TVYRRVYDANGKLIRHDSFKSHYIPDSSTAVYGPGRTPPGPYFVLPSSL
Ga0318508_12076492	3300031780	Soil	HVVAGSGELGFDVTVTRDVYARDGKRLRHDVFKSHYIPDSPTTVYGPGKTPPGPYIVIPSTT
Ga0318552_102858211	3300031782	Soil	VSHTGPQTNWTKPSMNYAVDPSATPHSKKVVPGSGELGFDVTVTRDVYDAGGKLIRHDVFKSHYIPDSPTTVYGPGRKPPGPYIVLPSAT
Ga0318557_102827841	3300031795	Soil	PNAPRGSMKVVPGSGELGFDVTVTRDVYTRDGKLLRHNVFKSHYIPDSPTAVYGPGRTPPGPYFVIPSSV
Ga0318499_101476722	3300031832	Soil	TGPQVNWTQPRLTYAVDPNAPRGSMKVVPGSGELGFDVTVTRDVYTRDGKLLRHNVFKSHYIPDSPTAVYGPGRTPPGPYFVIPSSV
Ga0318536_105663982	3300031893	Soil	VTVTRDVYARDGKRLRHDVFKSHYIPDSPTTVYGPGKTPPGPYIVIPSTT
Ga0306921_114484762	3300031912	Soil	RRVVSRTGPQVNWTQPRLTYAVDPNAPRGSMKVVPGSGELGFDVTVTRDVYTRDGKLLRHNVFKSHYIPDSPTAVYGPGRTPPGPYFVIPSSV
Ga0308176_128574511	3300031996	Soil	VTGTGEQGFDIQVWRKVYDRNGKLLRSNLFKSHYIPDSPTTVYGPGRTPPGPYIVLPTTT
Ga0318533_112039431	3300032059	Soil	VPGSGELGFDVTVTRDVYTRDGKLLRHNVFKSHYIPDSPTAVYGPGRTPPGPYFVIPSSV
Ga0308173_122619291	3300032074	Soil	VKVVNGTGEKGFDVQVTRTVYDNDGKELRHDLFKSRYIPDSPTTVYGPGATPPGPYIVLPSSY
Ga0370501_0215845_2_166	3300034195	Untreated Peat Soil	KGFDVTVGRTVYDASGKELRHETFRSHYIPDSPTTVYGPGKTPPGPYIVLPSTL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085994

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences