Metagenome / Metatranscriptome Family F086018

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086018
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	74 residues
Representative Sequence	MDMVRLLCKIKHPSKVGELLESYISQSSVVPKGSYQIRQPGSVPREVRKVLTQALKEGQTCSCWAHGLHTWLFT
Number of Associated Samples	87
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	99.10 %
% of genes from short scaffolds (< 2000 bps)	91.89 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (51.351 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (42.342 % of family members)
Environment Ontology (ENVO)	Unclassified (54.054 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.351 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.53% β-sheet: 10.78% Coil/Unstructured: 65.69%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF12974	Phosphonate-bd	3.60
PF01544	CorA	3.60
PF01494	FAD_binding_3	2.70
PF00491	Arginase	1.80
PF00982	Glyco_transf_20	1.80
PF07298	NnrU	1.80
PF07690	MFS_1	1.80
PF00326	Peptidase_S9	1.80
PF00873	ACR_tran	0.90
PF00571	CBS	0.90
PF13472	Lipase_GDSL_2	0.90
PF06983	3-dmu-9_3-mt	0.90
PF02586	SRAP	0.90
PF01980	TrmO	0.90
PF01566	Nramp	0.90
PF13673	Acetyltransf_10	0.90
PF00210	Ferritin	0.90
PF01058	Oxidored_q6	0.90
PF01872	RibD_C	0.90
PF09347	DUF1989	0.90
PF01070	FMN_dh	0.90
PF04014	MazE_antitoxin	0.90
PF01266	DAO	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	5.41
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	3.60
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	2.70
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	2.70
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	2.70
COG0010	Arginase/agmatinase family enzyme	Amino acid transport and metabolism [E]	1.80
COG0380	Trehalose-6-phosphate synthase, GT20 family	Carbohydrate transport and metabolism [G]	1.80
COG4094	Uncharacterized membrane protein	Function unknown [S]	1.80
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.90
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.90
COG0377	NADH:ubiquinone oxidoreductase 20 kD subunit (chain B) or related Fe-S oxidoreductase	Energy production and conversion [C]	0.90
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.90
COG1720	tRNA (Thr-GGU) A37 N6-methylase	Translation, ribosomal structure and biogenesis [J]	0.90
COG1740	Ni,Fe-hydrogenase I small subunit	Energy production and conversion [C]	0.90
COG1914	Mn2+ or Fe2+ transporter, NRAMP family	Inorganic ion transport and metabolism [P]	0.90
COG1941	Coenzyme F420-reducing hydrogenase, gamma subunit	Energy production and conversion [C]	0.90
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.90
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.90
COG2764	Zn-dependent glyoxalase, PhnB family	Energy production and conversion [C]	0.90
COG3260	Ni,Fe-hydrogenase III small subunit	Energy production and conversion [C]	0.90
COG3865	Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase	General function prediction only [R]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.35 %
All Organisms	root	All Organisms	48.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.35 %
cellular organisms	root	All Organisms → cellular organisms	48.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.35 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.35 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	34.23 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	6.31 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.35 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	22.52 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	5.41 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.60 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.35 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	21.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.41 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.70 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.80 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	0.90 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.35 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	21.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.41 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.70 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.80 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	0.90 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.35 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	21.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.41 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.70 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.80 %
Nevskia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia	0.90 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.35 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	21.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.41 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.70 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.80 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	0.90 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0617567	Not Available	558	Open in IMG/M
3300004633\|Ga0066395_10860360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	547	Open in IMG/M
3300005332\|Ga0066388_100868221	Not Available	1485	Open in IMG/M
3300005363\|Ga0008090_15252793	All Organisms → cellular organisms → Bacteria → Proteobacteria	1038	Open in IMG/M
3300005434\|Ga0070709_11520683	Not Available	544	Open in IMG/M
3300005566\|Ga0066693_10322375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	619	Open in IMG/M
3300005764\|Ga0066903_105896341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	643	Open in IMG/M
3300006050\|Ga0075028_100269478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	940	Open in IMG/M
3300006174\|Ga0075014_101028607	Not Available	500	Open in IMG/M
3300010043\|Ga0126380_11625747	Not Available	578	Open in IMG/M
3300010046\|Ga0126384_11379881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	656	Open in IMG/M
3300010046\|Ga0126384_11874545	Not Available	571	Open in IMG/M
3300010048\|Ga0126373_10597580	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1156	Open in IMG/M
3300010048\|Ga0126373_12695179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	555	Open in IMG/M
3300010048\|Ga0126373_13109394	Not Available	517	Open in IMG/M
3300010048\|Ga0126373_13213015	Not Available	509	Open in IMG/M
3300010359\|Ga0126376_10688858	All Organisms → cellular organisms → Bacteria → Proteobacteria	981	Open in IMG/M
3300010361\|Ga0126378_11051088	Not Available	917	Open in IMG/M
3300010376\|Ga0126381_101429087	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1000	Open in IMG/M
3300010376\|Ga0126381_102240823	Not Available	785	Open in IMG/M
3300010376\|Ga0126381_102919944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	680	Open in IMG/M
3300010376\|Ga0126381_103199211	Not Available	647	Open in IMG/M
3300010398\|Ga0126383_10366719	All Organisms → cellular organisms → Bacteria	1466	Open in IMG/M
3300012181\|Ga0153922_1179854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	502	Open in IMG/M
3300012683\|Ga0137398_10892800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	620	Open in IMG/M
3300012971\|Ga0126369_11430795	Not Available	781	Open in IMG/M
3300015357\|Ga0134072_10154923	Not Available	758	Open in IMG/M
3300016319\|Ga0182033_11993182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	529	Open in IMG/M
3300016341\|Ga0182035_10480789	Not Available	1058	Open in IMG/M
3300016341\|Ga0182035_10621947	All Organisms → cellular organisms → Bacteria → Proteobacteria	935	Open in IMG/M
3300016341\|Ga0182035_11172107	Not Available	685	Open in IMG/M
3300016357\|Ga0182032_10696823	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	852	Open in IMG/M
3300016357\|Ga0182032_11171867	Not Available	661	Open in IMG/M
3300016357\|Ga0182032_11663896	Not Available	556	Open in IMG/M
3300016371\|Ga0182034_10103998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2042	Open in IMG/M
3300016371\|Ga0182034_11382331	Not Available	615	Open in IMG/M
3300016404\|Ga0182037_10456519	Not Available	1063	Open in IMG/M
3300016404\|Ga0182037_11832710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	542	Open in IMG/M
3300017947\|Ga0187785_10396518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	662	Open in IMG/M
3300017959\|Ga0187779_10016139	All Organisms → cellular organisms → Bacteria → Proteobacteria	4259	Open in IMG/M
3300017970\|Ga0187783_10878004	Not Available	646	Open in IMG/M
3300017975\|Ga0187782_10914380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	681	Open in IMG/M
3300018060\|Ga0187765_10745434	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300021178\|Ga0210408_10799878	Not Available	738	Open in IMG/M
3300021406\|Ga0210386_11560999	Not Available	549	Open in IMG/M
3300021420\|Ga0210394_10130056	All Organisms → cellular organisms → Bacteria	2182	Open in IMG/M
3300021474\|Ga0210390_10331677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1288	Open in IMG/M
3300021560\|Ga0126371_10863692	Not Available	1050	Open in IMG/M
3300021560\|Ga0126371_12421372	Not Available	635	Open in IMG/M
3300021560\|Ga0126371_13207872	Not Available	553	Open in IMG/M
3300024279\|Ga0247692_1039804	Not Available	724	Open in IMG/M
3300026315\|Ga0209686_1003034	All Organisms → cellular organisms → Bacteria → Proteobacteria	7738	Open in IMG/M
3300027869\|Ga0209579_10658949	Not Available	567	Open in IMG/M
3300027882\|Ga0209590_11049959	Not Available	506	Open in IMG/M
3300029636\|Ga0222749_10546360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	630	Open in IMG/M
3300031128\|Ga0170823_13380159	Not Available	838	Open in IMG/M
3300031543\|Ga0318516_10180845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	1215	Open in IMG/M
3300031543\|Ga0318516_10836919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	519	Open in IMG/M
3300031545\|Ga0318541_10815147	Not Available	521	Open in IMG/M
3300031546\|Ga0318538_10483542	Not Available	671	Open in IMG/M
3300031561\|Ga0318528_10215996	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1027	Open in IMG/M
3300031561\|Ga0318528_10716146	Not Available	535	Open in IMG/M
3300031572\|Ga0318515_10466467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	675	Open in IMG/M
3300031679\|Ga0318561_10461031	Not Available	699	Open in IMG/M
3300031680\|Ga0318574_10152586	All Organisms → cellular organisms → Bacteria → Proteobacteria	1313	Open in IMG/M
3300031680\|Ga0318574_10767216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	565	Open in IMG/M
3300031681\|Ga0318572_10180518	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300031715\|Ga0307476_10322415	All Organisms → cellular organisms → Bacteria → Proteobacteria	1135	Open in IMG/M
3300031719\|Ga0306917_11024666	Not Available	644	Open in IMG/M
3300031720\|Ga0307469_11314190	Not Available	687	Open in IMG/M
3300031723\|Ga0318493_10749391	Not Available	549	Open in IMG/M
3300031724\|Ga0318500_10473200	Not Available	628	Open in IMG/M
3300031744\|Ga0306918_10163618	Not Available	1653	Open in IMG/M
3300031751\|Ga0318494_10469746	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M
3300031764\|Ga0318535_10258437	Not Available	780	Open in IMG/M
3300031770\|Ga0318521_10927427	Not Available	533	Open in IMG/M
3300031771\|Ga0318546_10319913	Not Available	1076	Open in IMG/M
3300031778\|Ga0318498_10429967	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300031779\|Ga0318566_10176136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1061	Open in IMG/M
3300031796\|Ga0318576_10497963	Not Available	575	Open in IMG/M
3300031799\|Ga0318565_10418974	Not Available	649	Open in IMG/M
3300031823\|Ga0307478_10581421	Not Available	936	Open in IMG/M
3300031879\|Ga0306919_10097846	All Organisms → cellular organisms → Bacteria → Acidobacteria	2058	Open in IMG/M
3300031880\|Ga0318544_10242565	Not Available	697	Open in IMG/M
3300031890\|Ga0306925_10197455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	2169	Open in IMG/M
3300031897\|Ga0318520_10653585	Not Available	655	Open in IMG/M
3300031910\|Ga0306923_10236438	All Organisms → cellular organisms → Bacteria → Proteobacteria	2090	Open in IMG/M
3300031912\|Ga0306921_11514207	Not Available	733	Open in IMG/M
3300031941\|Ga0310912_10561529	Not Available	889	Open in IMG/M
3300031942\|Ga0310916_10512488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1021	Open in IMG/M
3300031942\|Ga0310916_10843374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	770	Open in IMG/M
3300031945\|Ga0310913_10236692	All Organisms → cellular organisms → Bacteria	1281	Open in IMG/M
3300031945\|Ga0310913_11069706	Not Available	564	Open in IMG/M
3300031947\|Ga0310909_10898242	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300031962\|Ga0307479_10293857	Not Available	1606	Open in IMG/M
3300031962\|Ga0307479_11001436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	805	Open in IMG/M
3300032009\|Ga0318563_10120712	All Organisms → cellular organisms → Bacteria	1395	Open in IMG/M
3300032010\|Ga0318569_10237941	Not Available	845	Open in IMG/M
3300032039\|Ga0318559_10280057	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	773	Open in IMG/M
3300032042\|Ga0318545_10223936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	674	Open in IMG/M
3300032044\|Ga0318558_10152516	Not Available	1113	Open in IMG/M
3300032059\|Ga0318533_10074721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2301	Open in IMG/M
3300032059\|Ga0318533_11289518	Not Available	534	Open in IMG/M
3300032064\|Ga0318510_10191306	Not Available	823	Open in IMG/M
3300032064\|Ga0318510_10474177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	540	Open in IMG/M
3300032089\|Ga0318525_10607324	Not Available	558	Open in IMG/M
3300032091\|Ga0318577_10373014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	682	Open in IMG/M
3300032261\|Ga0306920_100279500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2488	Open in IMG/M
3300032261\|Ga0306920_103061903	Not Available	629	Open in IMG/M
3300033158\|Ga0335077_11274245	All Organisms → cellular organisms → Bacteria → Proteobacteria	715	Open in IMG/M
3300033290\|Ga0318519_11030906	Not Available	512	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.10%
Host-Associated	Host-Associated	0.90%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.30%
Aquatic	Environmental → Aquatic	1.80%
Fungi	Host-Associated → Fungi	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.30%
Sediment	Environmental → Aquatic → Sediment	1.80%
Mycelium	Host-Associated → Fungi → Mycelium	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	87.39%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.41%
Loam	Environmental → Terrestrial → Soil → Loam	4.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.80%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	64.86%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.82%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.80%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.90%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.90%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	42.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.12%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.22%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.50%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.70%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.90%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.90%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.90%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012181	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaG	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024279	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK33	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_06175671	2228664022	Soil	MVRLRKIQHVSKVAELLESYISQSELVPKGSYQIREPGSVPRQVREPLTQAVKEGQTWSCRAHGLHTWLFTCSMSRLLSRERGAPVLEVSI
Ga0066395_108603602	3300004633	Tropical Forest Soil	MEIVRLLCRIKHPSKVGELLESYISQSSVVPRGSYQIHQPDSVPREVRKVLAQAVKEGQTWSCWAHGLHTWLFTCNMSRSLSRERGAPVLQV
Ga0066388_1008682213	3300005332	Tropical Forest Soil	MEIVRFFCRIRHPSRIGELLDSYVSQSDVVPKGSYQIHQPGSVPREVRK
Ga0008090_152527932	3300005363	Tropical Rainforest Soil	MEIVRLLCRIKHPSKVGELLESYISQSPVVPKGSYQIHQAGSVPQEVRKVLAQAVKEGQTWSCWAH
Ga0070709_115206831	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MGIVRLLCKAQHTSKVGELLESYISQSDVVPKGSYQIRQPGSVPHEVRKVLSQAVKEGQTWSCWAHGLHTWLFTCNMARPL
Ga0066693_103223751	3300005566	Soil	MEMVRLRWKSQYSSKVEELLESYISQSEVVPRGAYRIREPDSVPREVRKPLIQAAKEGQTWSCRAHGLHTWLFTCNMSRPLSRERGAPVLQVS
Ga0066903_1058963412	3300005764	Tropical Forest Soil	MEIVRLLCRIKHPSKVGELLESYISQSPVVPKGSYQIHQAGSVPQEVRKVLAQAVKEGQTWSCWAHGLHTWLFTCNMSRSLSRERGAPVLQ
Ga0075028_1002694782	3300006050	Watersheds	MEMVRLRCKTQCSSKVEELLDSYISQSEVVPKGAYRIREPDSVPRNVRKPLIQAAKEGQTWSCRAHGLHTWLFTCNMSRPLSRERGAPVLQVNSHV*
Ga0075014_1010286071	3300006174	Watersheds	MDMVRLLCKIQRPSKVRELLESFVSQSDVVPRGSYQIRKPSSVPREVRKVLTHAVKEGQTWSCWAHGLH
Ga0126380_116257473	3300010043	Tropical Forest Soil	MEIVRLLCKVQHTSKVGELLESYISQSDVVPKGSYQIRQPGSVPREVRKVLSQAVKQGQTWSCWAH
Ga0126384_113798811	3300010046	Tropical Forest Soil	MEIVRFLCKIQPSSQVGELLESYVSQSEVVPKGSYQIRQPGSVPREVRKVLTQAVKEGQTWACWAHGLHTWLFTCNMSRPLSRERGAP
Ga0126384_118745451	3300010046	Tropical Forest Soil	MDMVRLLCKIQRPSKVGELLESYISQSDVVPKGSYQIRQPDSVPRDVRKVLAQAVKQGQTWSCWAHGLHTW
Ga0126373_105975801	3300010048	Tropical Forest Soil	MEMVRLLCRFRQPSKTGELLESYISQSPVVPKGSYQVHRPGSVPPEVRKVLTQALKEGQTWSCWVHGLHTWLFTCNMSRPL
Ga0126373_126951791	3300010048	Tropical Forest Soil	MELVRLLCKIKHPSKVGELLESYIAQSSVVPKGSYQICEPGSIPRDVRKVLTQAVREGQTWSCWAHGLHTWLFTCNMSRPLSRERGAPV
Ga0126373_131093941	3300010048	Tropical Forest Soil	MEIVRLLCRIKHPSKVGELLESYISQSPLVPKGSYQIHQPGSVPRDVRKVLAQAVKDGQTWS
Ga0126373_132130151	3300010048	Tropical Forest Soil	MDMVRLLCKIQRPSKVGELLESYISQSDVVPKGSYQIRQPDSVPRDVRKALTQAVKQGETWSCWAHGLHTWLFTC
Ga0126376_106888582	3300010359	Tropical Forest Soil	MIPMEIVRLLCRIKHPSKVGELLESYISQSPVVPKGSYQIHQAGSVPQEVRKVLAQAVKEGQTWSCWAHG
Ga0126378_110510882	3300010361	Tropical Forest Soil	MEIVRLLCRIKHPSKVGELLESYISQSAVVPRGSYQIHQAGSVPRQVR
Ga0126381_1014290872	3300010376	Tropical Forest Soil	MEMVRLLCKIRPSSKVGELLESYIAQSPVVPKGSYQIHRPGSVPPEVRKVLTQALKEGQTWSCW
Ga0126381_1022408231	3300010376	Tropical Forest Soil	VEFVRVLCKIRHLSQVGELLESYVSQSDLVPKGSYQIRRPGSVPREVRKALTQAVKEGQTWSCWAHGLHTWLFTCNV
Ga0126381_1029199442	3300010376	Tropical Forest Soil	MIPMEIVRLLCRIKHPSKVGELLESYISQSPVVPKGSYQIHQAGSVPQEVRKVLAQAVKEGQTWSCWAHGLHTWLFTCNMSRSLSRERGAPVLQ
Ga0126381_1031992111	3300010376	Tropical Forest Soil	MEIVRLLCKIHQPSKLGELLESYVSQSDVVSRGSYQIHQPGSVPRELRKVLTQAVKEGRTWSCWAHGLH
Ga0126383_103667191	3300010398	Tropical Forest Soil	MDMVRLLCKIQRPSKVGELLESYISQSDVVPKGSYQIRQPDSVPRDVRKVLTQAVKQGQTWSCWAHGL
Ga0153922_11798541	3300012181	Attine Ant Fungus Gardens	MEMVRLLCKIHRASKVGELLESYISQSDVVPSGSYQIHEPSSVPREVRKVLTRAVKDGQTWSCWAHGRHTWLFICNMSRPLSRERGAPV
Ga0137398_108928001	3300012683	Vadose Zone Soil	MEMVRLRWKSQCSSKVEELLESYISQSEVVPKGAYRIREPDSVPREVRKPLIQAAKEGQTWSCRAHGLHTWLFTCNMSRPLSRERGAPVLQVSLY
Ga0126369_114307953	3300012971	Tropical Forest Soil	MRIVRLLCKVQHTSQVGELLDSYISQSEVVPKGSYQIRQPGSVPRQVREVLSQAV
Ga0134072_101549231	3300015357	Grasslands Soil	MEMVSLRWKSQCSSKVEELLESYISQSEVVPKGAYRIREPDSVPREVRKPLIQAAKEGQTWSCRAHGLHTWLFTCNMSRPLSR
Ga0182033_119931821	3300016319	Soil	MGVVRLLCRVKRISKVGELLESYISQSDVVPKGSYQIRQPGSLPPEVRKVLTQAVKEGQTWSCWAHGLHTWLFTCNMCRPLSRE
Ga0182035_104807891	3300016341	Soil	MEMVRLLCKIRHPSKVGELLESYVSQSSVVPKGSFQIRQRGSVPPEVRKVLTQAVKE
Ga0182035_106219471	3300016341	Soil	MEIVRLLCRIKHPSKVGELLESYISQSSLVPKGSYQIHQPGSVPRDVRKVLAQAVKEGQTWSCWAHGLH
Ga0182035_111721072	3300016341	Soil	MGLVRLLCKVQHTSRVGELLESYISQSDVVPKGSYQIRQPASVPREVRKVLSQAVKEGQ
Ga0182032_106968231	3300016357	Soil	MDMVRLLCKIRHPSKVGELLESYISQSSVVPKGSYQIRQPGSVPREVRKVLTQALREGQT
Ga0182032_111718671	3300016357	Soil	MEIVRLLCRIKHPSKVGELLESYISQSSLVPKGSYQIHQPGSVPRDVRKVLAQAVKEG
Ga0182032_116638962	3300016357	Soil	MEMVRLLCKIKHRSKVEELLESFVSQSSLVPKGCYQIRRSGSVPQEVRKVLTQAVK
Ga0182034_101039983	3300016371	Soil	MGVVRLLCRVQRISKVGELLESYISQSDVVPKGSYQIRQPGSLPPEVRKVLTQAVK
Ga0182034_113823311	3300016371	Soil	MEMVRLLCKIKHRSKVEELLESFVSQSSLVPKGCYQIRRSGSVPQEVRKVLTQAVKEGQTWSCWAHGLHTWLFTCN
Ga0182037_104565192	3300016404	Soil	MEMVRLLCKIRHPSKVGELLESYVSQSSVVPKGSFQIRQRGSVPPEVRKVLTQAVKEGQTWSCWVHGLHTWLF
Ga0182037_118327101	3300016404	Soil	MGVVRLLCRVQRISKVGELLESYISQSDVVPKGSYQIRQPGSLPPEVRKVLTQAVKEGQTWSCWAHGLHTWLFTCNMCRPLSRDRRTP
Ga0187785_103965181	3300017947	Tropical Peatland	MEIVRLLCKIQHPSKVGELLESYISQSCDVPKGSYQIHQLGSVPREVRKVVSQAVKEGQTWSCWAHGLRTWLFTCNMCRPLSRERGAPVLQVSL
Ga0187779_100161391	3300017959	Tropical Peatland	MEIVRLLCKIQHPSKVGELLESYISQSCVVPKGSYQIHQLGSVPREVRRVLSQALKE
Ga0187783_108780042	3300017970	Tropical Peatland	MQMVRLWCRVYRTSKVGELLESYISQSDVVPRGSYQLHEPDSVPLDARRVLTHAVKQG
Ga0187782_109143801	3300017975	Tropical Peatland	MEMVRLLCKIHHASKVGELLESYISQSNVVPSGSYQIHEPSSVPREVRKVLTQAVKNGQTWSCWAHGSHTWLFTCSMSRPLSRERGGPVLQVS
Ga0187765_107454342	3300018060	Tropical Peatland	VEIVRLLCKIQHPSKVGELLESYISQSCVVPKGSYQIHQLGSVPREVRKVLSRAVKEGQTWSCWAHGL
Ga0210408_107998781	3300021178	Soil	MEMVRLLCKIQRPSKVRELLESFVSQSEVVPRGSYQIHQPSSVPREVRKVLTHAVKQGQTWS
Ga0210386_115609991	3300021406	Soil	MEMVRLRCKTQYSSEVEELLDSYISQSEVVPKGAYRIRKPDSVPPNVRKPLIQAAKEGQTWSCRAHGLHTWLFTCNMSRPLS
Ga0210394_101300561	3300021420	Soil	MDMVRLLCKIRHASKVRELLESYISQSDVVPSGSYQIHEPSSVPREVRKVLPQAVKEGLTWSCWAHGCHTWLFTCNMSRSLSRELGVP
Ga0210390_103316773	3300021474	Soil	MEMVRLRCKTQYSSEVEELLDSYISQSEVVPKGAYRIRKPDSVPPNVRKPLIQAAKEGQTWSCRAHGLHTWLFTCNMSRPLSRERGAPVLQVSLY
Ga0126371_108636921	3300021560	Tropical Forest Soil	MELVRLLCKVRHPSKVGELLESYVSQSDVVPKGSYQIRQPGSVPREVRNVL
Ga0126371_124213721	3300021560	Tropical Forest Soil	MELVRVLCKIRPLSKVGELLESYVSQSDLVPKGSYQIRQAGSVPREVRKALTQAVKEGQT
Ga0126371_132078722	3300021560	Tropical Forest Soil	MEIVRLLCRIKHPSKVGELLESYISQSSVVPKGSYQIHQAGSVPREVRKVLAQAVKEGQTWSCWAHGLHTWLF
Ga0247692_10398041	3300024279	Soil	MGIVRLLCKAQHTSKVGELLESYISQSDVVPKGSYQIRQPGSVPREVRRVLSQAVKEGQTWSCWAHGLHTWLFTCN
Ga0209686_10030348	3300026315	Soil	MEMVRLRWKSQYSSKVEELLESYISQSEVVPKGAYRIREPDSVPREVRKPLIQAAKEGQTWSCRAHGLHTWLFTCNMSRPLSRERGAPVLQ
Ga0209579_106589492	3300027869	Surface Soil	MQTVRMWCRVHRTSKVGELLESYILQSTVVPTGSYQIREPTSVPRDVRQVVTDAVKDGQTWSCWAHGLHIWLFTCSLSPLSRKS
Ga0209590_110499591	3300027882	Vadose Zone Soil	MEMVRLRWKSQYSSKVEELLESYISQSEVVPKGAYRIREPDSVPREVRKPLIQAAKEGQTWSCRAHGLHTWLFTCN
Ga0222749_105463601	3300029636	Soil	MGMVRLLCKIHRASKVRELLESYISQSDLVPSGSYQIHEPSSVPREVRKVLTQAVKEGQTWSCWAHGCHTWLFTCNMSRSLSRELGVPVLQV
Ga0170823_133801592	3300031128	Forest Soil	MEMVRLLCKIQRPSKVRELLESFVSQSDVVPRGSYQIRKPSSVPREVRKVLTHAVKEGQTWSCWAHGLHT
Ga0318516_101808452	3300031543	Soil	MEMVRLLCKIRHPSKVGELLESYVSQSSVVPKGSFQIRQRGSVPPEVRKVLTQAVKEGQTWSC
Ga0318516_108369191	3300031543	Soil	MGVVRLLCRVQRISKVGELLESYISQSDVVPKGSYQIRQPGSLPPEVRKVLTQAVKEGQTWSCWAHGLHTWLFTCNMCRPLSRDRRTPVLQV
Ga0318541_108151472	3300031545	Soil	MEMVRLLCKIKHRSKVEELLESFVSQSSLVPKGCYQIRRSGSVPQEVRKVLTQAVKEGQTWSCWAHGLHTWLFTCNVS
Ga0318538_104835422	3300031546	Soil	MGLVRLLCKVQHTSRVGELLESYISQSDVVPKGSYQIRQPASVPREVRKVLSQAVKE
Ga0318528_102159962	3300031561	Soil	MDMVRLLCKIRHPSKVGELLESYISQSSVVPKGSYQIRRTGSVPREVRKVLTQALREGQTCSCWAHGLHTWLFTCN
Ga0318528_107161461	3300031561	Soil	MEMVRLLCKIKHRSKVEELLESFVSQSSLVPKGCYQIRRSGSVPQEVRKVLTQAVKEGQTWSCWAHGLH
Ga0318515_104664672	3300031572	Soil	MEMVRLLCKIKHRSKVEELLESFVSQSSLVPKGCYQIRRSGSVPQEVRKVLTQAVKEGQTWSCWAHGLHTWLFTCNVSRPLSRERGAP
Ga0318561_104610311	3300031679	Soil	MEMVRLLCKIRHPSKVGELLESYVSQSSVVPKGSFQIRQRGSVPPEVRKVLTQAVKEGQTWSCWVHGLHTWLFTCNMSRSLSRERGAPVLQ
Ga0318574_101525861	3300031680	Soil	MDMVRLLCKIRHPSKVGELLESYISQSSVVPKGSYQIRRTGSVPREVRKVLTQ
Ga0318574_107672161	3300031680	Soil	MEIVRLLCRSQHPSKVGELLESYISQSSVVPKGAYQIHQVGSVPRDVRKVLTQAVKEGQTWSCWAHGLHTWLFTCNMCRPLSRERGAPVLQ
Ga0318572_101805181	3300031681	Soil	MGIVRLLCRVQRISKVGELLESYISQSDVVPKGSYQIRQPGSLPPEVRK
Ga0307476_103224152	3300031715	Hardwood Forest Soil	MEMVRLLCKIQRPSKVRELLESFVSQSDVVPRGSYQIRKPSSVPREVRKVLTDAVKEGLTWSCWAHGLHTWLFICNMSRPLSGASRAPVLVV
Ga0306917_110246661	3300031719	Soil	MGVVRLLCRVKRISKVGELLESYISQSDVVPKGSYQIRQPGSLPPEVRK
Ga0307469_113141901	3300031720	Hardwood Forest Soil	MELARRLLSLRHLSKVAELLESYISQSEVVPKGSYPIRKSESVPPEVRKTLTRAVKAGQTWA
Ga0318493_107493911	3300031723	Soil	MDMVRLLCKIKHPSKVGELLESYISQSSVVPKGSYQIRQPGSVPREVRKVLTQALKEGQTCSCWAHGLHTWLFT
Ga0318500_104732001	3300031724	Soil	MEIVRLLCRIQHPSKVGELLESYISQSCVVPKGSYQIYQLGSVPREVRKVLTQAIKEGQTWSCWAHGLRTWLFT
Ga0306918_101636183	3300031744	Soil	MGLVRLLCKVQHTSKVGELLESYISQSDVVPKGSYQIRQPASVPREVRKVLSQAVKEGQTWSCWAHGLHT
Ga0318494_104697463	3300031751	Soil	MDMVRLLCKIRHPSKVGELLESYISQSSLVPKGSYQIRQPGSVPREVRKVLTQALKEGQTCSCWAHGLHTWLFTCNMSRPLSRERGAPV
Ga0318535_102584371	3300031764	Soil	MEMVRLLCKIRHPSKVGELLESYVSQSSVVPKGSFQIRQRGSVPPEVRKVLTQAVKEGQTWSCWVHGLHTWLFTCN
Ga0318521_109274271	3300031770	Soil	MEIVRLLCRIQRSSKLEELLESYISQSDVVPKGSYQIRQPGSVPREVRKVLTQAVKQGQTWSCWAHGLHTWLFTC
Ga0318546_103199132	3300031771	Soil	MEMVRLLCKIRHPSKVGELLESYVSQSSVVPKGSFQIRQRGSVPPEVRKVLTQAVKEGQTWSCWVHGLHTWLFTCNMSRSLSR
Ga0318498_104299672	3300031778	Soil	MDMVRLLCKIRHPSKVGELLESYISQSSLVPKGSYQIRQPGSVPREVRKVLTQALKEGQTCSCWAHGLHTWLFTCNMSRPLSRERGAPVL
Ga0318566_101761361	3300031779	Soil	MEIVRLLCRIKHPSKVGELLESYISQSSLVPKGSYQIHQPGSVPRDVRKVLAQAVKEGQTWSCWAHGLHTWLFTCNMSRSLSRERGAPVLQVSQWCRETCLE
Ga0318576_104979632	3300031796	Soil	MEIVRLLCRIKHPSKVGELLESYISQSSLVPKGSYQIHQPGSVPRDVRKVLA
Ga0318565_104189742	3300031799	Soil	MEIVRLLCRIQHPSKVGELLESYISQSCVVPKGSYQIYQLGSVPREVRKVLTQAIKEGQTWSCWAHGLRTWLFTC
Ga0307478_105814211	3300031823	Hardwood Forest Soil	MEMVRLLCKIYRASKVGELLESYISQSDVVPSGSYQIHEPSSVPRDVRKVLTQAVKEGQTWSCWAHGRHTWLFTCNMTRLLSRERG
Ga0306919_100978461	3300031879	Soil	MEIVRLLCRIQHPSKVGELLESYISQSCVVPKGSYQIYQLGSVPREVRKVLTQAIKEGQTWSCWAHGLRTWLFTCNMCRPLSRERGAPV
Ga0318544_102425652	3300031880	Soil	MEMVRLLCKIRHPSKVGELLESYVSQSSVVPKGSFQIRQRGSVPPEVRKVLTQAVKEGQTWSCWVHGLHTWLFTCNMSR
Ga0306925_101974551	3300031890	Soil	MEIVRLLCRSQHPSKVGELLESYISQSSVVPKGAYQIHQVGSVPRDVRKVLTQAVKE
Ga0318520_106535851	3300031897	Soil	MEMVRLLCKIRHPSKVGELLESYVSQSSVVPKGSFQIRQRGSVPPEVRKVLTQAVKEGQTWSCWVHGLHTWLFTCNMSRS
Ga0306923_102364381	3300031910	Soil	MEMVRLLCKIKHRSKVEELLESFVSQSSLVPKGCYQIRRSGSVPQEVRK
Ga0306921_115142072	3300031912	Soil	MEMVRLSCKVQHPSKVGELLESYISQSHVVPKGSYQIHRFDSVPREVRSALTHAVKEGETWSCWAYGLRTWLFTCNMCRPLSRERGAPVL
Ga0310912_105615291	3300031941	Soil	MEIVRLLCRIKHPSKVGELLESYISQSAVVPRGSYQIHQAGSVPREVRKVLTQA
Ga0310916_105124882	3300031942	Soil	MGVVRLLCRVQRISKVGELLESYISQSDVVPKGSYQIRQPGSLPPEVRKVLTQAVKEGQTWSCWAHGLHTWLFTCS
Ga0310916_108433742	3300031942	Soil	MDMVRLLCKIRHPSKVGELLESYISQSSVVPKGSYQIRRTGSVPREVRKV
Ga0310913_102366921	3300031945	Soil	MGVVRLLCRVQRISKVGELLESYISQSDVVPKGSYQIRQPGSVPPEVRKVLTQAVKDG
Ga0310913_110697062	3300031945	Soil	MEMVRLLCKIRHPSKVGELLESYVSQSSVVPKGSFQIRQRGSVPPEVRKVLTQAVKEGQTWSCWVHGLHT
Ga0310909_108982422	3300031947	Soil	MGVVRLLCRVKRISKVGELLESYISQSDVVPKGSYQIRQPGSLPPEVRKVLTQAV
Ga0307479_102938571	3300031962	Hardwood Forest Soil	MEMVRLLCKIHRASQVGELLESYISQSDVVPSGSYQIHEPSSVPREVRKVLTQAVKEGQTWSCWAHGGH
Ga0307479_110014361	3300031962	Hardwood Forest Soil	MEIVRFLRKIQHPSKVGELLESYIAQSDVVPKGSYQIHRPGSIPQAVRDVLTRAVKEGQTWSCWAHGLHTFLFTCNMSRPLTRERGVPVLEVS
Ga0318563_101207123	3300032009	Soil	MDMVRLLCKIRHPSKVGELLESYISQSSLVPKGSYQIRQPGSVPREVRKVLTQALKEGQTCSCWAHGLHTW
Ga0318569_102379411	3300032010	Soil	MEIVRLLCRIQHPSKVGELLESYISQSCVVPKGSYQIYQLGSVPREVRKVLTQAIKEGQTWSCWAHGLHTWLFTCNMSR
Ga0318559_102800573	3300032039	Soil	MDMVRLLCKIRHPSKVGELLESYISQSSVVPKGSYQIRRTGSVPREVRKVLTQALREGQTCSCWAHGLHTWLFTCNMSRPLSR
Ga0318545_102239362	3300032042	Soil	MEIVRLLCRIKHPSKVGELLESYISQSSLVPKGSYQIHQPGSVPRDVRKVLAQAVKEGQTWSCWAHGLHTWLFTCNMSRSLSRERGAPVLQVG
Ga0318558_101525163	3300032044	Soil	MEIVRLLCRIQHPSKVGELLESYISQSCVVPKGSYQIYQLGSVPREVRKVLTQAIKEGQTWSCWAHGLRTWLFTCNMCRPLSR
Ga0318533_100747211	3300032059	Soil	MGVVRLLCRVQRISKVGELLESYISQSDVVPKGSYQIRQPGSLPPEVRKVLTQAVKEGQTWSCWAHGLHTWLFTC
Ga0318533_112895182	3300032059	Soil	MEMVRLLCKIRHSSKVAELLESYVSQSDVVPKGSYQIHQPGSLPREVRKVLTQAVKEGQTWSC
Ga0318510_101913062	3300032064	Soil	MEMVRLLCKIRHPSKVGELLESYVSQSSVVPKGSFQIRQRGSVPPEVRKVLTQAVKEGQTWSCW
Ga0318510_104741772	3300032064	Soil	MDMVRLLCKIRHPSKVGELLESYISQSSLVPKGSYQIRQPGSVPREVRKVLTQALKEGQTCSCWAHGLHTFLFTCNMSRPLSRERGAP
Ga0318525_106073241	3300032089	Soil	MEIVRLLCRIQHPSKVGELLESYISQSCVVPKGSYQIYQLGSVPREVRKVLTQAIKEGQTWSCWAH
Ga0318577_103730141	3300032091	Soil	MGVVRLLCRVQRISKVGELLESYISQSDVVPKGSYQIRQPGSLPPEVRKVLTQAVKEGQTWSCWAHGLHTWLFTCNMCRPLSRERRTPVLQV
Ga0306920_1002795003	3300032261	Soil	MGVVRLLCRVQRISKVGELLESYISQSDVVPKGSYQIRQPGSLPPEVRKVLTQAV
Ga0306920_1030619032	3300032261	Soil	MEIVRLLCRSKHPSKVGELLESYISQSSLVPKGSYQIHQPGSVPRDVRKVLAQAVKDGQTWSCWAHG
Ga0335077_112742452	3300033158	Soil	MEMVRLRCKIHDSSKVQELLESYISQSEVVPKGAYRIREPGSVPPEVRKPLIQAAKDGQTWSCRAHGLHTWLFTCNMS
Ga0318519_110309061	3300033290	Soil	MGIVRLLCRVQRISKVGELLESYISQSDVVPKGSYQIRQPGSLPPEVRKVLTQAVKEG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086018

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences