NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F086157

Metagenome Family F086157

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F086157
Family Type Metagenome
Number of Sequences 111
Average Sequence Length 55 residues
Representative Sequence MEEIQNQVERLIDDMERDENMSNEDLLMALYKLKTDIEDYNFRHESEGGLQWEDLD
Number of Associated Samples 69
Number of Associated Scaffolds 111

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 9.91 %
% of genes near scaffold ends (potentially truncated) 23.42 %
% of genes from short scaffolds (< 2000 bps) 89.19 %
Associated GOLD sequencing projects 63
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (65.766 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(36.036 % of family members)
Environment Ontology (ENVO) Unclassified
(93.694 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(97.297 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 66.07%    β-sheet: 0.00%    Coil/Unstructured: 33.93%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 111 Family Scaffolds
PF10544T5orf172 4.50
PF06067DUF932 0.90
PF01019G_glu_transpept 0.90

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 111 Family Scaffolds
COG0405Gamma-glutamyltranspeptidaseAmino acid transport and metabolism [E] 0.90


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A65.77 %
All OrganismsrootAll Organisms34.23 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10059600All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium1845Open in IMG/M
3300000101|DelMOSum2010_c10217037Not Available628Open in IMG/M
3300000115|DelMOSum2011_c10024779All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium2766Open in IMG/M
3300000115|DelMOSum2011_c10050767All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium1641Open in IMG/M
3300000116|DelMOSpr2010_c10003466All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium8999Open in IMG/M
3300000116|DelMOSpr2010_c10005866All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium6744Open in IMG/M
3300000137|LP_F_10_SI03_10DRAFT_c1027506Not Available878Open in IMG/M
3300001346|JGI20151J14362_10061508All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium1534Open in IMG/M
3300001450|JGI24006J15134_10083181All Organisms → Viruses → Predicted Viral1192Open in IMG/M
3300001450|JGI24006J15134_10095389All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium1079Open in IMG/M
3300001450|JGI24006J15134_10111166All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium965Open in IMG/M
3300001450|JGI24006J15134_10111893All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes960Open in IMG/M
3300001450|JGI24006J15134_10117861Not Available922Open in IMG/M
3300001450|JGI24006J15134_10130407Not Available853Open in IMG/M
3300001450|JGI24006J15134_10185671Not Available647Open in IMG/M
3300001450|JGI24006J15134_10195892Not Available620Open in IMG/M
3300001450|JGI24006J15134_10223144Not Available559Open in IMG/M
3300001472|JGI24004J15324_10064040All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium1046Open in IMG/M
3300001472|JGI24004J15324_10098279Not Available756Open in IMG/M
3300001472|JGI24004J15324_10098320Not Available756Open in IMG/M
3300001589|JGI24005J15628_10084090All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium1111Open in IMG/M
3300001589|JGI24005J15628_10101336All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium966Open in IMG/M
3300004457|Ga0066224_1136375Not Available762Open in IMG/M
3300005239|Ga0073579_1169453All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes26516Open in IMG/M
3300006165|Ga0075443_10209036Not Available701Open in IMG/M
3300006735|Ga0098038_1025501Not Available2229Open in IMG/M
3300007229|Ga0075468_10236392Not Available522Open in IMG/M
3300007862|Ga0105737_1072137All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes853Open in IMG/M
3300009074|Ga0115549_1143479Not Available778Open in IMG/M
3300009193|Ga0115551_1012107All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium4663Open in IMG/M
3300009433|Ga0115545_1203686Not Available674Open in IMG/M
3300009443|Ga0115557_1267585Not Available650Open in IMG/M
3300009447|Ga0115560_1355564Not Available555Open in IMG/M
3300011252|Ga0151674_1062029Not Available591Open in IMG/M
3300011253|Ga0151671_1148559Not Available551Open in IMG/M
3300014959|Ga0134299_1049337Not Available608Open in IMG/M
3300017706|Ga0181377_1039398Not Available942Open in IMG/M
3300017706|Ga0181377_1049382Not Available810Open in IMG/M
3300017706|Ga0181377_1060977Not Available700Open in IMG/M
3300017714|Ga0181412_1082412Not Available773Open in IMG/M
3300017721|Ga0181373_1078304Not Available588Open in IMG/M
3300017724|Ga0181388_1037532All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium1184Open in IMG/M
3300017725|Ga0181398_1089093Not Available737Open in IMG/M
3300017726|Ga0181381_1052654Not Available891Open in IMG/M
3300017726|Ga0181381_1055993Not Available860Open in IMG/M
3300017727|Ga0181401_1052855All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium1107Open in IMG/M
3300017728|Ga0181419_1125768Not Available623Open in IMG/M
3300017733|Ga0181426_1075855Not Available671Open in IMG/M
3300017734|Ga0187222_1052153All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium952Open in IMG/M
3300017743|Ga0181402_1053143All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium1089Open in IMG/M
3300017744|Ga0181397_1074775Not Available910Open in IMG/M
3300017746|Ga0181389_1074436All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium959Open in IMG/M
3300017746|Ga0181389_1195301Not Available524Open in IMG/M
3300017746|Ga0181389_1208225Not Available503Open in IMG/M
3300017748|Ga0181393_1067795Not Available950Open in IMG/M
3300017751|Ga0187219_1136239Not Available717Open in IMG/M
3300017755|Ga0181411_1112319Not Available799Open in IMG/M
3300017762|Ga0181422_1043309Not Available1453Open in IMG/M
3300017764|Ga0181385_1145898Not Available719Open in IMG/M
3300017765|Ga0181413_1164455Not Available667Open in IMG/M
3300017768|Ga0187220_1067561All Organisms → Viruses → Predicted Viral1076Open in IMG/M
3300017771|Ga0181425_1269415Not Available525Open in IMG/M
3300017776|Ga0181394_1075734All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium1098Open in IMG/M
3300017782|Ga0181380_1267254Not Available565Open in IMG/M
3300017786|Ga0181424_10043016Not Available1957Open in IMG/M
3300020165|Ga0206125_10006396All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes9524Open in IMG/M
3300020165|Ga0206125_10007538All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes8435Open in IMG/M
3300020165|Ga0206125_10019661All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium4097Open in IMG/M
3300020165|Ga0206125_10113051All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium1133Open in IMG/M
3300020335|Ga0211690_1063570Not Available823Open in IMG/M
3300020347|Ga0211504_1060652Not Available886Open in IMG/M
3300020382|Ga0211686_10170713Not Available897Open in IMG/M
3300020382|Ga0211686_10426890Not Available533Open in IMG/M
3300020388|Ga0211678_10135281Not Available1067Open in IMG/M
3300020396|Ga0211687_10165839Not Available907Open in IMG/M
3300020438|Ga0211576_10005692All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes8336Open in IMG/M
3300020438|Ga0211576_10385580Not Available718Open in IMG/M
3300020452|Ga0211545_10173578All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium999Open in IMG/M
3300020469|Ga0211577_10754754Not Available565Open in IMG/M
3300022061|Ga0212023_1004202Not Available1665Open in IMG/M
3300022164|Ga0212022_1001300All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium2627Open in IMG/M
3300022164|Ga0212022_1014958All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium1127Open in IMG/M
(restricted) 3300022920|Ga0233426_10051599All Organisms → Viruses1965Open in IMG/M
(restricted) 3300022920|Ga0233426_10093605All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium1338Open in IMG/M
(restricted) 3300023109|Ga0233432_10368972Not Available638Open in IMG/M
3300024346|Ga0244775_10388400All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium1149Open in IMG/M
3300025086|Ga0208157_1024975Not Available1776Open in IMG/M
3300025120|Ga0209535_1125678Not Available862Open in IMG/M
3300025120|Ga0209535_1156515Not Available709Open in IMG/M
3300025137|Ga0209336_10112226Not Available756Open in IMG/M
3300025137|Ga0209336_10117823Not Available731Open in IMG/M
3300025138|Ga0209634_1065101All Organisms → Viruses → Predicted Viral1737Open in IMG/M
3300025138|Ga0209634_1075761All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium1563Open in IMG/M
3300025138|Ga0209634_1104399All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium1246Open in IMG/M
3300025138|Ga0209634_1162673Not Available896Open in IMG/M
3300025138|Ga0209634_1193640Not Available784Open in IMG/M
3300025138|Ga0209634_1195989Not Available777Open in IMG/M
3300025138|Ga0209634_1286922Not Available573Open in IMG/M
3300025138|Ga0209634_1331757Not Available509Open in IMG/M
3300025168|Ga0209337_1055930Not Available2020Open in IMG/M
3300025168|Ga0209337_1089776All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium1463Open in IMG/M
3300025168|Ga0209337_1183518Not Available869Open in IMG/M
3300025168|Ga0209337_1194215Not Available832Open in IMG/M
3300025168|Ga0209337_1238591Not Available706Open in IMG/M
3300025168|Ga0209337_1249649Not Available680Open in IMG/M
3300025168|Ga0209337_1259007Not Available660Open in IMG/M
3300025168|Ga0209337_1259427Not Available659Open in IMG/M
3300025594|Ga0209094_1080032Not Available775Open in IMG/M
3300025645|Ga0208643_1119814Not Available699Open in IMG/M
3300027522|Ga0209384_1025309Not Available1820Open in IMG/M
3300027672|Ga0209383_1148163Not Available731Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine36.04%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater22.52%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine11.71%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine5.41%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine5.41%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous4.50%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater3.60%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater2.70%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine1.80%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine1.80%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine0.90%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine0.90%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water0.90%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine0.90%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine0.90%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300000115Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011EnvironmentalOpen in IMG/M
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300000137Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample F_10_SI03_10EnvironmentalOpen in IMG/M
3300001346Pelagic Microbial community sample from North Sea - COGITO 998_met_01EnvironmentalOpen in IMG/M
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300001472Marine viral communities from the Pacific Ocean - LP-32EnvironmentalOpen in IMG/M
3300001589Marine viral communities from the Pacific Ocean - LP-40EnvironmentalOpen in IMG/M
3300004457Marine viral communities from Newfoundland, Canada MC-1EnvironmentalOpen in IMG/M
3300005239Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of MaineEnvironmentalOpen in IMG/M
3300006165Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNAEnvironmentalOpen in IMG/M
3300006735Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaGEnvironmentalOpen in IMG/M
3300007229Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300007862Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373A_0.2umEnvironmentalOpen in IMG/M
3300009074Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430EnvironmentalOpen in IMG/M
3300009193Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321EnvironmentalOpen in IMG/M
3300009433Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330EnvironmentalOpen in IMG/M
3300009443Pelagic marine microbial communities from North Sea - COGITO_mtgs_110421EnvironmentalOpen in IMG/M
3300009447Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509EnvironmentalOpen in IMG/M
3300011252Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_4, permeateEnvironmentalOpen in IMG/M
3300011253Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_2, permeateEnvironmentalOpen in IMG/M
3300014959Marine microbial communities to study oil droplet degradation from Trondheimsfjord, Norway - 0148 : 4 days incubationEnvironmentalOpen in IMG/M
3300017706Marine viral communities from the Subarctic Pacific Ocean - Lowphox_13 viral metaGEnvironmentalOpen in IMG/M
3300017714Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15EnvironmentalOpen in IMG/M
3300017721Marine viral communities from the Subarctic Pacific Ocean - Lowphox_09 viral metaGEnvironmentalOpen in IMG/M
3300017724Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 11 SPOT_SRF_2010-05-17EnvironmentalOpen in IMG/M
3300017725Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29EnvironmentalOpen in IMG/M
3300017726Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24EnvironmentalOpen in IMG/M
3300017727Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20EnvironmentalOpen in IMG/M
3300017728Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24EnvironmentalOpen in IMG/M
3300017733Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 49 SPOT_SRF_2013-12-23EnvironmentalOpen in IMG/M
3300017734Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24 (version 2)EnvironmentalOpen in IMG/M
3300017743Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17EnvironmentalOpen in IMG/M
3300017744Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23EnvironmentalOpen in IMG/M
3300017746Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29EnvironmentalOpen in IMG/M
3300017748Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 16 SPOT_SRF_2010-10-21EnvironmentalOpen in IMG/M
3300017751Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)EnvironmentalOpen in IMG/M
3300017755Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09EnvironmentalOpen in IMG/M
3300017762Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 45 SPOT_SRF_2013-07-18EnvironmentalOpen in IMG/M
3300017764Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11EnvironmentalOpen in IMG/M
3300017765Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28EnvironmentalOpen in IMG/M
3300017768Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)EnvironmentalOpen in IMG/M
3300017771Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 48 SPOT_SRF_2013-11-13EnvironmentalOpen in IMG/M
3300017776Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23EnvironmentalOpen in IMG/M
3300017782Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19EnvironmentalOpen in IMG/M
3300017786Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18EnvironmentalOpen in IMG/M
3300020165Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1EnvironmentalOpen in IMG/M
3300020335Marine microbial communities from Tara Oceans - TARA_B100000768 (ERX556030-ERR599035)EnvironmentalOpen in IMG/M
3300020347Marine microbial communities from Tara Oceans - TARA_B100000497 (ERX556109-ERR598994)EnvironmentalOpen in IMG/M
3300020382Marine microbial communities from Tara Oceans - TARA_B100000780 (ERX556058-ERR599059)EnvironmentalOpen in IMG/M
3300020388Marine microbial communities from Tara Oceans - TARA_B100001063 (ERX555965-ERR599064)EnvironmentalOpen in IMG/M
3300020396Marine microbial communities from Tara Oceans - TARA_B100000767 (ERX555915-ERR599122)EnvironmentalOpen in IMG/M
3300020438Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)EnvironmentalOpen in IMG/M
3300020452Marine microbial communities from Tara Oceans - TARA_B100001173 (ERX556054-ERR599078)EnvironmentalOpen in IMG/M
3300020469Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)EnvironmentalOpen in IMG/M
3300022061Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v2)EnvironmentalOpen in IMG/M
3300022164Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v2)EnvironmentalOpen in IMG/M
3300022920 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_10_MGEnvironmentalOpen in IMG/M
3300023109 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MGEnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
3300025086Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025120Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)EnvironmentalOpen in IMG/M
3300025137Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025168Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)EnvironmentalOpen in IMG/M
3300025594Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430 (SPAdes)EnvironmentalOpen in IMG/M
3300025645Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes)EnvironmentalOpen in IMG/M
3300027522Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027672Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA (SPAdes)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1005960053300000101MarineMEEIQNQVERLIEDMERDDNIKSEDLLMALYKLKTDIEDYNFRREEYTGGSINWEDLD*
DelMOSum2010_1021703713300000101MarineMEEIQEQLGRLIDDMERDENMSNEDLLMALYKLKTDIEDYNFRHESEGGL
DelMOSum2011_1002477953300000115MarineMEEIQNQVERLIDDMERDENMKSEDLLMALYKLKTDIEDYNFRREGDLQWEDLD*
DelMOSum2011_1005076723300000115MarineMEEIQEQLGRLIDDMERDENMSNEDLLMALYKLKTDIEDYNFRHESEGGLQWEDLD*
DelMOSpr2010_10003466223300000116MarineMEEIQNQVERLIDDMEGNDNVSNEDLLMALYKLKTDIEDYVFRHESEGGIQWEDLD*
DelMOSpr2010_10005866173300000116MarineMEEIQSQVERLIEDMEGDENMSNEDLLMALYKLKTDIEDYNFRHESEGGLQWEDLD*
LP_F_10_SI03_10DRAFT_102750643300000137MarineMEEIQEQVGRLIDEMEGNDSMSNEDLLMALYKLKTDIEDYTFRYESEGGLQWEDLD*
JGI20151J14362_1006150853300001346Pelagic MarineMEEIQNQVERLIDDMERDENMESEDLLMALYKLKTDIEDYNFRKEGSLEWEDLD*
JGI24006J15134_1008318143300001450MarineMEEIQEQVGRLIDDMEGNDSMSNEDLLMALYKLKTDIEDYNFRHESEGGLQWEDLD*
JGI24006J15134_1009538943300001450MarineMEEIQEQVGRLIDDMERDENMSNEDLLMALYKLKTDIEDYTFRHESEGGLQWEDLD*
JGI24006J15134_1011116613300001450MarineMEEIQSQVERLIEDMEGDDNMSNEDLLMALYKLKTDIEDYNFRHESEGGLQWEDLD*
JGI24006J15134_1011189333300001450MarineMEEIQEQVGRLIDDMEGNDNMSNEDLLMALYKLKTDIEDYTFRHESEGGLQWEDLD*
JGI24006J15134_1011786133300001450MarineMDEIQEQVGRLIDDMERDENMSNEDLLMALYKLKTDIEDYIFRHESEGDLQWEDLD*
JGI24006J15134_1013040723300001450MarineMEEIQEQVGRLIDDMEGNDSMSNEDLLMALYKLKTDIEDYTFRHESEGGFQWEDLD*
JGI24006J15134_1018567123300001450MarineMNEIQEQLERLIDDMERDENMKSEDLLMALYKLKTDIEDYNFRHERDGGLQWEDLD*
JGI24006J15134_1019589223300001450MarineMEEIQNQVERLIDDMERDENMEKEDLLMALYKLKTDIEDYTFRHESEGGLQWEDLD*
JGI24006J15134_1022314433300001450MarineMEEIQNQVERLIEDMEGDDNMSNEDLLMALYKLKTNIEDYNFRHESEGGLQWEDLD*
JGI24004J15324_1006404043300001472MarineMEEIQEQVGRLIDDMEGNDSMSNEDLLMALYKLKTDIEDYTFRHESEGGLQWEDLD*
JGI24004J15324_1009827943300001472MarineMEEIQEQVGRLIDDMEGNDSMSNEDLLMALYKLKTDIEDYTFRHESEGGLQWE
JGI24004J15324_1009832013300001472MarineMEEIQEQVGRLIDDMEGNDNMSNEDLLMALYKLKTDIEDYTFRHESEGGLQWE
JGI24005J15628_1008409013300001589MarineMEEIQSQVERLIEDMEGDENMSNEDLLMALYKLKTDIEDYNFRHESEGGL
JGI24005J15628_1010133643300001589MarineMEEIQEQVGRLIDDMERDENMSNEDLLMALYKLKTDIEDYTFRHENEGGLQWEDLD*
Ga0066224_113637523300004457MarineMEEIQSQVERLIEDMEGDENMSNVDLLMALYKLKTDIEDYNLGREEGLQFQWEDLD*
Ga0073579_1169453163300005239MarineMEEIQNQVERLIDDMERDENMKSEDLLVALYKLKTDIEDLNFRREGDFQWEDLD*
Ga0075443_1020903623300006165MarineMEEIQEQVGRLIEDMEGDDNMSNEDLLMALYKLKTDIEDYNFRHESEGGLQWEDLD*
Ga0098038_102550133300006735MarineMEEIQDQVGRLIDDMERDENMSNEDLLMALYKLKTDIEDYNFRHESEGGLQWEDLD*
Ga0075468_1023639213300007229AqueousMEEIQNQVERLIDDMERDENMSNEDLIMALYKLKTDIEDYNFRHESEGGLQWEDLD*
Ga0105737_107213743300007862Estuary WaterMEEIQEQVGRLIDDMEGNDSMSNEDLLMALYKLKTDIEDYTFRYESEGGLQWEDLD*
Ga0115549_114347913300009074Pelagic MarineMEEIQEQVGRLIDEMEGNDSISNEDLLMALYKLKTDIEDYVFRHESEGGLQWEDLD*
Ga0115551_101210763300009193Pelagic MarineMEEIQEQVGRLIDEMEGNDSISNEDLLMALYKLKTDIEDYNFRHERGGGLQWEDLD*
Ga0115545_120368633300009433Pelagic MarineMEEIQEQVGRLIDEMEGNDSISNEDLLMALYKLKTDIEDYVFRHESEGGLQWE
Ga0115557_126758513300009443Pelagic MarineMEEIQEQVGRLIDEMEGNDSISNEDLLMALYKLKTDIEDYIFRHESEGGLQWEDLD*
Ga0115560_135556433300009447Pelagic MarineMEEIQNQVERLIDDMERDENMESEDLLMALYKLKTDIEDYVFRHESEGGLQWEDLD*
Ga0151674_106202923300011252MarineEEIQDQVERLIDDMERDENMSNEDLLMALYKLKTDIEDYNFRHERDGGLQWEDLD*
Ga0151671_114855913300011253MarineMEEIQDQVGRLIDDMEGDDNMSNEDLLMALYKLKTDIEDYNFRHESEGGLQWEDLD*
Ga0134299_104933713300014959MarineMEEIQDQVGRLIEDMEGDDNMSNEDLLMALYKLKTDIEDYNFQHE
Ga0181377_103939833300017706MarineMEEIQEQVGRLIDDMERDENMSNEDLLMALYKLKTDIEDYNFQHESEGGLQWEDLD
Ga0181377_104938233300017706MarineMEEIQNQVERLIDDMERDENMKSEDLLMALYKLKTDIEDYNFRHESEGGLQWEDLD
Ga0181377_106097713300017706MarineMEEIQNQVESLIDDMERDENMKSEDLLMALYKLKTDIEDYTFRHESEGGLQWEDLE
Ga0181412_108241233300017714SeawaterMEEIQNQVERLIDDMERDENMSNEDLLMALYKLKTDIEDYNFRHESEGGLQWEDLD
Ga0181373_107830413300017721MarineMEEIQNQVESLIDDMERDDNMKSEDLLMALYKLKTEIEDYNFRRDGDLQWEDLD
Ga0181388_103753243300017724SeawaterMEEIQNQVERLIDDMERDENMSSADLLMALYKLKTDIEDYNFRHERGGDLQWEDLD
Ga0181398_108909333300017725SeawaterMEEIQNQVERLIDDMERDENMKSEDLLMALYKLKTDIEDLNFRREGDLQWEDLD
Ga0181381_105265423300017726SeawaterMEEIQSQVERLIDDVERDENMTNADLIAALYKLKTDIEDYNFRHESEGGLQWEDLD
Ga0181381_105599313300017726SeawaterMGICFKTNKRIMEEIQNQVERLIDDMEGNDNMSNEDLLMALYKLKTDIEDYTFRHESEGGLQWEDLD
Ga0181401_105285513300017727SeawaterMEEIQNQVERLIDDMERDENMSNEDLLMALYKLKTDIEDYNFRHERDGGLQWED
Ga0181419_112576833300017728SeawaterMEEIQNQVERLIDDMERDENMSNEDLLMALYKLKTDIEDYNFRHERDGGLQWE
Ga0181426_107585523300017733SeawaterEIQDQVGRLIDDMERDENMSNEDLLMALYKLKTDIEDYNLGREEGLQWEDLD
Ga0187222_105215313300017734SeawaterMEEIQNQVERLIDDMEGNDNMSNEDLLMALYKLKTDIEDYNFQHERDGGLQW
Ga0181402_105314353300017743SeawaterMEEIQNQVERLIDDMERDENMKSEDLLMALYKLKTDIEDYNLGREEGLQWEDLD
Ga0181397_107477543300017744SeawaterMEEIQNQVERLIDDMERDENMSSADLLMALYKLKTDIEDYNFRHERDGGLQWEDLD
Ga0181389_107443653300017746SeawaterMEEIQNQVERLIDDMERDENMSNEDLLMALYKLKTDIEDYNFRHE
Ga0181389_119530113300017746SeawaterMEEIQSQVERLIDDVERDETMTKADIVLALYKLKEEIEDYNFRHESEGGLQWEDLD
Ga0181389_120822533300017746SeawaterMEEIQNQVESLIDDMERDENMKSEDLLMALYKLKTDIEDYTFRYESEG
Ga0181393_106779513300017748SeawaterMEEIQEQVGRLIEDMERDENMSNADLLMALYKLKTDIEDYNFRHERGGDLQWEDLD
Ga0187219_113623933300017751SeawaterMEEIQDQVGRLIDDMERDENMSNEDLLIALYKLKTDIEDYNFRHESEGGLQWEDLD
Ga0181411_111231943300017755SeawaterMEEIQNQVERLIDDMEGNDNMSNEDLLMALYKLKTDIEDYTFRHESEGGLQWE
Ga0181422_104330943300017762SeawaterMEEIQNQVESLIDDMERDENMKSEDLLMALYKLKTDIEDLNFRREGDLQWEDLD
Ga0181385_114589813300017764SeawaterMEEIQEQVGRLIDDMEGNDSMSNEDLLMAVYKLKTDIEDYTFRHESEGGLQWEDLD
Ga0181413_116445533300017765SeawaterMGICFKTNKRIMEEIQNQVERLIDDMEGNDNMSNEDLLMALYKLKTDIEDYTFRYESEGGLQWEDLN
Ga0187220_106756113300017768SeawaterMEEIQNQVERLIDDMERDENMSSEDLLMALYKLKTDIEDYNFRHERDGGLQWEDLD
Ga0181425_126941523300017771SeawaterMEEIQNQVESLIDDMERDENMKSEDLLMALYKLKTDIEDYNFRREGDLQWEDLD
Ga0181394_107573453300017776SeawaterMEEIQEQVGRLIDDMEGNDNMSNEDLLMALYKLKTDIEDYTFRYESEGGLQWED
Ga0181380_126725433300017782SeawaterQNQVERLIDDMERDENMSSEDLLMALYKLKTDIEDYNFQHESEGGLQWEDLD
Ga0181424_1004301633300017786SeawaterMEEIQNQVESLIDDMERDENMKSEDLLMALYKLKTDIEDLNFRREGDVQWEDLD
Ga0206125_1000639663300020165SeawaterMEEIQNQVERLIDDMERDENMKSEDLLMALYKLKTDIEDYNFRRDGEFQWEDPE
Ga0206125_10007538133300020165SeawaterMEEIQEQVGRLIDEMEGNDSISNEDLLMALYKLKTDIEDYVFRHESEGGLQWEDLD
Ga0206125_1001966153300020165SeawaterMEEIQDQVGRLIEDMEGDDNMSNEDLLMALYKLKTDIEDYTFRHESEGGLQWEDLD
Ga0206125_1011305113300020165SeawaterMEEIQNQVERLIDDMERDENMSSADLLMALYKLKTDIEDYNFRHERG
Ga0211690_106357013300020335MarineMEEIQNQVERLIEDMERDENMEKEDLLMALYKLKTDIEDYTFRHESEGGLQWEDLD
Ga0211504_106065213300020347MarineMEEIQNQVERLIDDMERDDNMKSEDLLMALYKLKTDIEDYNFRRDGDLQWEDLD
Ga0211686_1017071343300020382MarineMEEIQNQVERLIEDMERDENMEKEDLLMALYKLKTDIEDHTFRHESGGGLQWEDLD
Ga0211686_1042689013300020382MarineMEEIQEQVGRLIDDMERDENMSNEDLLMALYKLKTDIEDYNFRHESE
Ga0211678_1013528133300020388MarineMEEIQNQVGRLIDDMERDENMSNEDLLMALYKLKTDIEDYNFRHESEGDLQWEDLD
Ga0211687_1016583953300020396MarineMEEIQNQVERLIEDMERDENMEKEDLLMALYKLKTDIEDYNFRHE
Ga0211576_1000569273300020438MarineMEEIQEQVGRLIDDMEGNDSMSNEDLLMALYKLKTDIEDYTFRYESEGGLQWEDLD
Ga0211576_1038558013300020438MarineMEEIQNQVERLIDDMERDENMSNEDLLMALYKLKTDIEDYNFRHERDGGLQWEDLD
Ga0211545_1017357843300020452MarineMEEIQNQVERLIDDMEGNDNVSNEDLLMALYKLKTDIEDYVFRHESEGGLQWEDLDGPN
Ga0211577_1075475433300020469MarineMEEIQNQVERLIDDMERDENMKSEDLLMALYKLKTDIEDYNFQHERDGGLQWEDLD
Ga0212023_100420253300022061AqueousMEEIQNQVERLIDDMEGNDNVSNEDLLMALYKLKTDIEDYVFRHESEGGIQWEDLD
Ga0212022_100130053300022164AqueousMEEIQSQVERLIEDMEGDENMSNEDLLMALYKLKTDIEDYNFRHESEGGLQWEDLD
Ga0212022_101495853300022164AqueousMEEIQEQLGRLIDDMERDENMSNEDLLMALYKLKTDIEDYNFRHESEGGLQWEDLD
(restricted) Ga0233426_1005159933300022920SeawaterMEEIQNQVERLIDDMERDENMKSEDLLVALYKLKTDIEDLNFRREGDLQWEDLD
(restricted) Ga0233426_1009360553300022920SeawaterMEEIQNQVERLIDDMERDENMKSEDLLMALYKLKTDIEDYTFRHESEG
(restricted) Ga0233432_1036897213300023109SeawaterMEEIQNQIERLIDDMERDENMKSEDLLMALYKLKTDIEDYTFRHESEGGLQWEDLD
Ga0244775_1038840013300024346EstuarineMEEIQEQVGRLIDDMEGNDSMSNEDLLMALYKLKTDIEDYTFRHESEGGLQWEDLD
Ga0208157_102497543300025086MarineMEEIQDQVGRLIDDMERDENMSNEDLLMALYKLKTDIEDYNFRHESEGGLQWEDLD
Ga0209535_112567843300025120MarineMEEIQNQVERLIDDMERDENMKSEDLLMALYKLKTDIEDYNFRREGDLQWEDLD
Ga0209535_115651523300025120MarineMEEIQEQVGRLIDDMEGNDNMSNEDLLMALYKLKTDIEDYTFRHESEGGLQWEDLD
Ga0209336_1011222643300025137MarineMEEIQEQVGRLIDDMEGNDSMSNEDLLMALYKLKTDIEDYTFRHESEGGLQW
Ga0209336_1011782313300025137MarineMEEIQEQVGRLIDDMEGNDSMSNEDLLMALYKLKTDIEDYTFRHESEGGFQWEDLD
Ga0209634_106510113300025138MarineMDEIQEQVGRLIDDMERDENMSNEDLLMALYKLKTDIEDYIFRHESEGDLQWEDLD
Ga0209634_107576143300025138MarineMEEIQEQVGRLIDDMERDENMSNEDLLMALYKLKTDIEDYTFRHESEGGLQWEDLD
Ga0209634_110439953300025138MarineMEEIQNQVERLIEDMERDENMEKEDLLMTLYKLKTDIEDYTFRHESEGGLQWEDLD
Ga0209634_116267313300025138MarineMEEIQSQVERLIEDMEGDDNMSNEDLLMALYKLKTDIEDYNFRHESEGGLQWEDLD
Ga0209634_119364013300025138MarineMEEIQEQVGRLIEDMEGDDNMSSEDLLMALYKLKTDIEDYTFRHESEGGLQWEDLD
Ga0209634_119598943300025138MarineMEEIQDQVGRLIEDMEGDDDMSNEDLLMALYKLKTDIEDYNFRHESEGGLQ
Ga0209634_128692213300025138MarineMEEIQNQVERLIDDMERDENMKKEDLIMALYKLKTDIEDYTFRHENEGGLQWEDLD
Ga0209634_133175713300025138MarineMEEIQEQVGRLIDDMEGNDSMSNEDLLMALYKLKTDIEDYNFRHESEGGLQWEDLD
Ga0209337_105593033300025168MarineMEEIQNQVERLIDDMERDENMSSEDLLMALYKLKTDIEDYNFQHERDGGLQWEDLD
Ga0209337_108977613300025168MarineMEEIQNQVERLIDDIERDENMSSDDLLMALYKLKTDIEDYNFRHESEGGLQWEDLD
Ga0209337_118351813300025168MarineMEEIQDQVGRLIEDMEGDDNMSNEDLLMALYKLKTDIEDYNFRHESEGGLQWEDLD
Ga0209337_119421523300025168MarineMNEIQEQLERLIDDMERDENMKSEDLLMALYKLKTDIEDYNFRHERDGGLQWEDLD
Ga0209337_123859113300025168MarineMEEIQEQVGRLIEDMEGDDNMSNEDLLMALYKLKTDIEDYNFRHESEGGLQWEDLD
Ga0209337_124964913300025168MarineMEEIQNQVERLIDDMERDENMSSADLLMALYKLKTDIEDYTFRHESEGGLQWEDLD
Ga0209337_125900743300025168MarineMEEIQNQVERLIEDMEGDENMEREDLIMALYKLKTDIEDYTFRHESEGGLQWEDLD
Ga0209337_125942733300025168MarineMEEIQEQVGRLIDDMERDENMSNEDLLMALYKLKTDIEDYNFRHESEGGLQWEDLD
Ga0209094_108003213300025594Pelagic MarineMEEIQNQVERLIDDMERDENMKSEDLLMALYKLKTDIEDYVFRHESEGGLQWEDLD
Ga0208643_111981413300025645AqueousLIDDMEGNDNVSNEDLLMALYKLKTDIEDYVFRHESEGGIQWEDLD
Ga0209384_102530933300027522MarineMEEIQEQVGRLIDDMERDENMSSDDLLMALYKLKTDIEDYNFRHEREGGLQWEDLD
Ga0209383_114816333300027672MarineMEEIQEQVGRLIDDMERDENMSSADLLMALYKLKTDIEDYNFRHERDGGLQWEDLD


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