NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F086168

Metagenome Family F086168

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F086168
Family Type Metagenome
Number of Sequences 111
Average Sequence Length 48 residues
Representative Sequence LLETETNGVPERQLDGLMVKIEQLLGRIMVNQNKLMLLQDIKDE
Number of Associated Samples 83
Number of Associated Scaffolds 111

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 25.93 %
% of genes near scaffold ends (potentially truncated) 60.36 %
% of genes from short scaffolds (< 2000 bps) 88.29 %
Associated GOLD sequencing projects 73
AlphaFold2 3D model prediction Yes
3D model pTM-score0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (74.775 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(61.261 % of family members)
Environment Ontology (ENVO) Unclassified
(92.793 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(81.982 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 45.83%    β-sheet: 5.56%    Coil/Unstructured: 48.61%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.59
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 111 Family Scaffolds
PF04820Trp_halogenase 0.90
PF14528LAGLIDADG_3 0.90
PF13517FG-GAP_3 0.90
PF136402OG-FeII_Oxy_3 0.90



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A74.77 %
All OrganismsrootAll Organisms25.23 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001735|JGI24520J20079_1009640All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.556Open in IMG/M
3300002231|KVRMV2_100028479All Organisms → cellular organisms → Bacteria3351Open in IMG/M
3300002484|JGI25129J35166_1041419All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium924Open in IMG/M
3300002511|JGI25131J35506_1029250All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium756Open in IMG/M
3300002514|JGI25133J35611_10023492All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium2398Open in IMG/M
3300002514|JGI25133J35611_10031020All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium1991Open in IMG/M
3300002514|JGI25133J35611_10087214All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium946Open in IMG/M
3300005514|Ga0066866_10242262Not Available625Open in IMG/M
3300005514|Ga0066866_10313971Not Available533Open in IMG/M
3300006164|Ga0075441_10223430Not Available697Open in IMG/M
3300006310|Ga0068471_1495302Not Available1408Open in IMG/M
3300006336|Ga0068502_1512558All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium700Open in IMG/M
3300006340|Ga0068503_10426801Not Available2354Open in IMG/M
3300006341|Ga0068493_10084686Not Available752Open in IMG/M
3300006736|Ga0098033_1074803Not Available977Open in IMG/M
3300006751|Ga0098040_1170542Not Available641Open in IMG/M
3300006751|Ga0098040_1195392Not Available592Open in IMG/M
3300006789|Ga0098054_1159632Not Available830Open in IMG/M
3300006793|Ga0098055_1313681All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.585Open in IMG/M
3300006900|Ga0066376_10107998Not Available1725Open in IMG/M
3300006900|Ga0066376_10439145Not Available742Open in IMG/M
3300006902|Ga0066372_10533790Not Available693Open in IMG/M
3300006925|Ga0098050_1169637Not Available547Open in IMG/M
3300006990|Ga0098046_1084137Not Available714Open in IMG/M
3300007963|Ga0110931_1227418All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.555Open in IMG/M
3300008050|Ga0098052_1293526Not Available615Open in IMG/M
3300008051|Ga0098062_1021505All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.1119Open in IMG/M
3300008216|Ga0114898_1067918Not Available1106Open in IMG/M
3300008220|Ga0114910_1111056All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.809Open in IMG/M
3300009412|Ga0114903_1129215Not Available554Open in IMG/M
3300009481|Ga0114932_10070086Not Available2215Open in IMG/M
3300009481|Ga0114932_10225689Not Available1135Open in IMG/M
3300009593|Ga0115011_11708772All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.564Open in IMG/M
3300009613|Ga0105228_115584Not Available734Open in IMG/M
3300009622|Ga0105173_1056053Not Available672Open in IMG/M
3300010149|Ga0098049_1133195Not Available771Open in IMG/M
3300010149|Ga0098049_1167699Not Available677Open in IMG/M
3300010150|Ga0098056_1189114Not Available689Open in IMG/M
3300010150|Ga0098056_1276864Not Available554Open in IMG/M
3300010151|Ga0098061_1132002All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.914Open in IMG/M
3300010151|Ga0098061_1174651Not Available770Open in IMG/M
3300010151|Ga0098061_1307450Not Available545Open in IMG/M
3300010153|Ga0098059_1179978Not Available827Open in IMG/M
3300010883|Ga0133547_12034713Not Available1050Open in IMG/M
3300012919|Ga0160422_10180156All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster1274Open in IMG/M
3300012920|Ga0160423_10554941All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.780Open in IMG/M
3300012952|Ga0163180_10028925All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria3221Open in IMG/M
3300012953|Ga0163179_10406365All Organisms → Viruses → Predicted Viral1106Open in IMG/M
3300017760|Ga0181408_1176211Not Available547Open in IMG/M
3300017775|Ga0181432_1132577Not Available758Open in IMG/M
3300020415|Ga0211553_10407544Not Available548Open in IMG/M
(restricted) 3300024057|Ga0255051_10218440Not Available689Open in IMG/M
(restricted) 3300024518|Ga0255048_10099470Not Available1438Open in IMG/M
(restricted) 3300024520|Ga0255047_10378004Not Available714Open in IMG/M
(restricted) 3300024520|Ga0255047_10386566Not Available705Open in IMG/M
3300025039|Ga0207878_105242Not Available1754Open in IMG/M
3300025039|Ga0207878_128539Not Available567Open in IMG/M
3300025042|Ga0207889_1031467Not Available503Open in IMG/M
3300025046|Ga0207902_1002961Not Available1536Open in IMG/M
3300025046|Ga0207902_1034584Not Available624Open in IMG/M
3300025049|Ga0207898_1020466Not Available838Open in IMG/M
3300025049|Ga0207898_1023130Not Available788Open in IMG/M
3300025049|Ga0207898_1038945Not Available600Open in IMG/M
3300025050|Ga0207892_1022518Not Available707Open in IMG/M
3300025052|Ga0207906_1038028Not Available656Open in IMG/M
3300025069|Ga0207887_1019026Not Available1081Open in IMG/M
3300025069|Ga0207887_1053427Not Available659Open in IMG/M
3300025082|Ga0208156_1073292Not Available649Open in IMG/M
3300025084|Ga0208298_1069992Not Available661Open in IMG/M
3300025098|Ga0208434_1029258Not Available1305Open in IMG/M
3300025108|Ga0208793_1068062Not Available1054Open in IMG/M
3300025108|Ga0208793_1182678All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.535Open in IMG/M
3300025108|Ga0208793_1189122Not Available522Open in IMG/M
3300025112|Ga0209349_1119697All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.733Open in IMG/M
3300025118|Ga0208790_1018178Not Available2434Open in IMG/M
3300025125|Ga0209644_1075900Not Available785Open in IMG/M
3300025125|Ga0209644_1126311Not Available609Open in IMG/M
3300025128|Ga0208919_1159759Not Available694Open in IMG/M
3300025132|Ga0209232_1095483Not Available1010Open in IMG/M
3300025133|Ga0208299_1096325Not Available1008Open in IMG/M
3300025133|Ga0208299_1208842Not Available574Open in IMG/M
3300025218|Ga0207882_1051363All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.568Open in IMG/M
3300025282|Ga0208030_1010855Not Available3361Open in IMG/M
3300025873|Ga0209757_10138241Not Available759Open in IMG/M
3300025873|Ga0209757_10194201Not Available642Open in IMG/M
3300025873|Ga0209757_10256082Not Available556Open in IMG/M
3300026103|Ga0208451_1015621All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.819Open in IMG/M
3300026103|Ga0208451_1040540Not Available568Open in IMG/M
3300026103|Ga0208451_1048985Not Available528Open in IMG/M
3300026253|Ga0208879_1283445Not Available608Open in IMG/M
3300026261|Ga0208524_1141918Not Available611Open in IMG/M
3300027827|Ga0209035_10252434All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.879Open in IMG/M
3300027838|Ga0209089_10735622Not Available502Open in IMG/M
3300028022|Ga0256382_1061385Not Available885Open in IMG/M
3300029319|Ga0183748_1077554Not Available831Open in IMG/M
3300031606|Ga0302119_10024867Not Available2545Open in IMG/M
3300031701|Ga0302120_10018539Not Available3042Open in IMG/M
3300032011|Ga0315316_11038371Not Available666Open in IMG/M
3300032278|Ga0310345_11355353All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium696Open in IMG/M
3300032278|Ga0310345_12356794Not Available514Open in IMG/M
3300032360|Ga0315334_10120370Not Available2043Open in IMG/M
3300032820|Ga0310342_103072767All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.555Open in IMG/M
3300033742|Ga0314858_049854All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.1013Open in IMG/M
3300034629|Ga0326756_053169All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.505Open in IMG/M
3300034654|Ga0326741_016515Not Available1330Open in IMG/M
3300034654|Ga0326741_058538All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.646Open in IMG/M
3300034656|Ga0326748_033144Not Available713Open in IMG/M
3300034656|Ga0326748_058407Not Available547Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine61.26%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean4.50%
Marine OceanicEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic4.50%
Filtered SeawaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater4.50%
MarineEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine3.60%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater3.60%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater2.70%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine2.70%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater1.80%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater1.80%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater1.80%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface1.80%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine0.90%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater0.90%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater0.90%
Sea-Ice BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine0.90%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater0.90%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment0.90%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001728Marine viral communities from the Pacific Ocean - LP-46EnvironmentalOpen in IMG/M
3300001731Marine viral communities from the Pacific Ocean - LP-37EnvironmentalOpen in IMG/M
3300001735Marine viral communities from the Pacific Ocean - LP-45EnvironmentalOpen in IMG/M
3300002231Marine sediment microbial communities from Santorini caldera mats, Greece - red matEnvironmentalOpen in IMG/M
3300002484Marine viral communities from the Pacific Ocean - ETNP_2_130EnvironmentalOpen in IMG/M
3300002511Marine viral communities from the Pacific Ocean - ETNP_2_1000EnvironmentalOpen in IMG/M
3300002514Marine viral communities from the Pacific Ocean - ETNP_6_85EnvironmentalOpen in IMG/M
3300005514Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV263EnvironmentalOpen in IMG/M
3300006164Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNAEnvironmentalOpen in IMG/M
3300006310Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500mEnvironmentalOpen in IMG/M
3300006336Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0500mEnvironmentalOpen in IMG/M
3300006340Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770mEnvironmentalOpen in IMG/M
3300006341Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT236_2_0770mEnvironmentalOpen in IMG/M
3300006736Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaGEnvironmentalOpen in IMG/M
3300006751Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006900Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_AEnvironmentalOpen in IMG/M
3300006902Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_AEnvironmentalOpen in IMG/M
3300006925Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaGEnvironmentalOpen in IMG/M
3300006990Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaGEnvironmentalOpen in IMG/M
3300007963Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)EnvironmentalOpen in IMG/M
3300008050Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaGEnvironmentalOpen in IMG/M
3300008051Marine viral communities from Cariaco Basin, Caribbean Sea - 23_WHOI_OMZEnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300008220Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908EnvironmentalOpen in IMG/M
3300009412Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2EnvironmentalOpen in IMG/M
3300009481Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaGEnvironmentalOpen in IMG/M
3300009593Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 MetagenomeEnvironmentalOpen in IMG/M
3300009613Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3737_250EnvironmentalOpen in IMG/M
3300009622Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155EnvironmentalOpen in IMG/M
3300010149Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaGEnvironmentalOpen in IMG/M
3300010150Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaGEnvironmentalOpen in IMG/M
3300010151Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaGEnvironmentalOpen in IMG/M
3300010153Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaGEnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300012919Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaGEnvironmentalOpen in IMG/M
3300012920Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaGEnvironmentalOpen in IMG/M
3300012952Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 MetagenomeEnvironmentalOpen in IMG/M
3300012953Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 MetagenomeEnvironmentalOpen in IMG/M
3300017760Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16EnvironmentalOpen in IMG/M
3300017775Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17EnvironmentalOpen in IMG/M
3300020415Marine microbial communities from Tara Oceans - TARA_B100001146 (ERX555973-ERR599166)EnvironmentalOpen in IMG/M
3300024057 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_9EnvironmentalOpen in IMG/M
3300024518 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_2EnvironmentalOpen in IMG/M
3300024520 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_1EnvironmentalOpen in IMG/M
3300025039Marine viral communities from the Pacific Ocean - LP-41 (SPAdes)EnvironmentalOpen in IMG/M
3300025042Marine viral communities from the Pacific Ocean - LP-47 (SPAdes)EnvironmentalOpen in IMG/M
3300025046Marine viral communities from the Pacific Ocean - LP-45 (SPAdes)EnvironmentalOpen in IMG/M
3300025049Marine viral communities from the Pacific Ocean - LP-55 (SPAdes)EnvironmentalOpen in IMG/M
3300025050Marine viral communities from the Pacific Ocean - LP-54 (SPAdes)EnvironmentalOpen in IMG/M
3300025052Marine viral communities from the Pacific Ocean - LP-37 (SPAdes)EnvironmentalOpen in IMG/M
3300025069Marine viral communities from the Pacific Ocean - LP-38 (SPAdes)EnvironmentalOpen in IMG/M
3300025082Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025084Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025098Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025108Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025112Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)EnvironmentalOpen in IMG/M
3300025118Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025125Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300025128Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025132Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)EnvironmentalOpen in IMG/M
3300025133Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025218Marine viral communities from the Deep Pacific Ocean - MSP-103 (SPAdes)EnvironmentalOpen in IMG/M
3300025282Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9 (SPAdes)EnvironmentalOpen in IMG/M
3300025873Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300026103Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155 (SPAdes)EnvironmentalOpen in IMG/M
3300026253Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_A (SPAdes)EnvironmentalOpen in IMG/M
3300026261Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV61 (SPAdes)EnvironmentalOpen in IMG/M
3300027827Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - AAIW_A/KNORR_S2/LV (SPAdes)EnvironmentalOpen in IMG/M
3300027838Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes)EnvironmentalOpen in IMG/M
3300028022Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750mEnvironmentalOpen in IMG/M
3300029319Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516EnvironmentalOpen in IMG/M
3300031606Marine microbial communities from Western Arctic Ocean, Canada - AG5_TmaxEnvironmentalOpen in IMG/M
3300031701Marine microbial communities from Western Arctic Ocean, Canada - AG5_BottomEnvironmentalOpen in IMG/M
3300032011Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416EnvironmentalOpen in IMG/M
3300032278Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MGEnvironmentalOpen in IMG/M
3300032360Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915EnvironmentalOpen in IMG/M
3300032820Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MGEnvironmentalOpen in IMG/M
3300033742Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawaterEnvironmentalOpen in IMG/M
3300034629Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 543_2600EnvironmentalOpen in IMG/M
3300034654Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 487_2244EnvironmentalOpen in IMG/M
3300034656Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 502_2477EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI24521J20086_100261163300001728MarinePYAQLDGLIVKIEQLLNRLANNQNKLMLLQEIRE*
JGI24514J20073_100322313300001731MarineTQGTPYAQLDGLIVKIEQLLNRLANNQNKLMLLQEIRE*
JGI24520J20079_100964023300001735MarineMKDEKALRELLEVETDGTPGAQLDGLMIRIEQLLGRISLNQNKLMLLQDIV*
KVRMV2_10002847983300002231Marine SedimentMMEDEKQLKVLLKTETHGVPERQLDGLLIKIEQQLGRIMVNQNKLILLQDITDE*
JGI25129J35166_104141913300002484MarineMMADEKQLRMLLETETHGVPERQLDGLLIKIEQQLGRIMVNQNKLILLQDITDE*
JGI25131J35506_102925013300002511MarineLATETNEVPEQQLDGLMVKIEQLLGRIMVNQNKLMLLQDLV*
JGI25133J35611_1002349273300002514MarineMMADEKSLRILLATDTNGVPEQQLDGLMVKIEQQLGRVMVNQNKLMLLQDITEHEV*
JGI25133J35611_1003102013300002514MarineETETDNVPEKQLDGLLIKIEQQLGRIMVNQNKLVLLQDITEHEV*
JGI25133J35611_1008721413300002514MarineLLEMETNGVPEQQLDGLMVKIEQLLGRIMVNQNKLMLLQDLV*
Ga0066866_1024226213300005514MarineLLETETDNVPEKQLDGLLIKIEQQLGRIMVNQNKLVLLQDITEHEV**
Ga0066866_1031397123300005514MarineLLETETNGVPERQLDGLMVKIEQLLGRIMVNQNKLLLLQDITDE*
Ga0075441_1022343013300006164MarineMVEEKELRALLKTETNGVPDRQLDGLFVKIEQLLARISNNQNKIILLQDLKDE*
Ga0068471_149530213300006310MarineEKELRNLLATETGGVPEQQLDGLMVKIEQLLGRIMVNQNKLMLLQDMV*
Ga0068502_151255823300006336MarineSVPEQQLDGLMVKIEQLLGRIMVNQNKLMLLQDIKDE*
Ga0068502_154328613300006336MarineTPYAQLDGLMVKIEQLLGRISTNQNKIMLLQELV*
Ga0068503_1042680173300006340MarineEKELRALLETETNGVPDRQLDGLFIKIEQLLARISNNQNKIILLQDLKDE*
Ga0068493_1008468623300006341MarineMKDEKALRELLEVETDGTPGAQLDGLMIRIEQLLGRISLNQNKLMLLQEIRE*
Ga0098033_107480313300006736MarineSMMKDEKALKELLKVETDGIPYEQLDGLMVKIEQLLGRISTNQNKIMLLQDIKEK*
Ga0098040_117054233300006751MarineLLETETNGVPERQLDGLMVKIEQLLGRIMVNQNKLMLLQDIKDE*
Ga0098040_119539213300006751MarineEKKLRDLLEMETNSVPEAQLDGLMIKIEQLLGRIMVNQNKLMLLQDLV*
Ga0098054_115963233300006789MarineKDLLSTETNGVPDEQLDGLMIKIEQLLGRIMVNQNKIMLLQSVTEENDS*
Ga0098055_131368113300006793MarineMMADEKSLRILLETETEGVPERQLDGLMVKIEQQLGRIMVNQNKLILLQDITDE*
Ga0066376_1010799833300006900MarineMMEDEKELRILLETETDGVPERQLDGLMIKVEQLLNRVANNQNKIMLLQDLKDE*
Ga0066376_1043914523300006900MarineEKALRELLDVETNGTPYAQLDGLMIKIEQLLGRVVNNQNKIMLLQELV*
Ga0066372_1053379023300006902MarineKELLKVETDGIPYEQLDGLMVKSEQLLGRISNNQNKIMLLQEIV*
Ga0098050_116963713300006925MarinePERQLDGLMVKIEQLLGRIMVNQNKLLLLQDITDE*
Ga0098046_108413713300006990MarineLLSTETNGVPDEQLDGLMIKIEQLLGRIMVNQNKIMLLQSVTEENDS*
Ga0110931_122741813300007963MarineMMVDEKQLRMLLETETEGVPDRQLDGLMVKIEQQLGRIMVNQNKLLLLQEITEE*
Ga0098052_129352623300008050MarineMMDDEKQLRLLLDTETEGVPERQLDGLMIKIEQQLGRIMVNQNKLILLQDITDE*
Ga0098062_102150523300008051MarineMMDDEKQLRLLLEAETEGVPERQLDGLMIKIEQQLGRIMVNQNKLILLQDITDQ*
Ga0114898_106791813300008216Deep OceanELLKVEIDGIPYEQLDGLMVKIEQLLGRIVNNQNKIMLLQEIV*
Ga0114910_111105623300008220Deep OceanMRDEKALRELLDIATGETPYAQLDGLMIKIEQLLGKVVSNQNKIMLLQELV*
Ga0114903_112921523300009412Deep OceanMMRDEKALRELLDIATGETPYAQLDGLMIKIEQLLGKVVSNQNKIMLLQELV*
Ga0114932_1007008663300009481Deep SubsurfaceMKADEDLLKVLLATETNGVPEKQLEGLVIKIEQQLGRVMVNQNKLMLLQDITN*
Ga0114932_1022568923300009481Deep SubsurfaceMMADEKQLKLLLETETDGIPDRQLDGLMIKVEQQLGRIMMNQNKLILLQDITEE*
Ga0115011_1170877213300009593MarineMKADEDLLKVLLATETNGVPEKQLGGLIIKIEQQLNRVMTNQNKLMLLQDISDK*
Ga0105228_11558413300009613Marine OceanicLLLETETDGIPDRQLDGLVVKIEQFLGRIMVNQNKLMLLQDLKDE*
Ga0105173_105605313300009622Marine OceanicTQEVPEQQLDGLMVKIEQLLGRIMINQNKLMLLQDLQ*
Ga0098049_113319513300010149MarineMKEDEDLLKVLLATETNGVPEKQLEGLIIKIEQQLGRVMVNQNKLMLLQDITDQ*
Ga0098049_116769913300010149MarineMKKDEDLLKVLLATETNGVPEKQIDGLIIKIEQQLGRVMVNQNKLMLLQDITDQ*
Ga0098056_118911413300010150MarineTETNGVPDEQLDGLMIKIEQLLGRIMVNQNKIMLLQSVTEENDS*
Ga0098056_127686413300010150MarineRELLETETNGVPEQQLDGLMVKIEQLLGRIMVNQNKLMLLQDLV*
Ga0098061_113200223300010151MarineMKEDEDLLKVLLATETNGVPEKQLGGLIIKIEQQLGRVMANQNKLMLLQDITDQ*
Ga0098061_117465113300010151MarineMMADEKSLRILLETETDNVPEKQLDGLLIKIEQQLGRIMVNQNKLILLQDITDE*
Ga0098061_130745023300010151MarineADEKELRTLLGTETEGVPERQLDGLMVKIEQLLGRIMVNQNKLMLLQDIV*
Ga0098059_117997813300010153MarineLRVLLETETNGVPERQLDGLMVKIEQLLGRIMVNQNKLMLLQDLV*
Ga0133547_1203471323300010883MarineMMVEEKELRVLLSTETNGVPDQQLDGLFVKIEQLLSRISNNQNKIILLQDLKDE*
Ga0160422_1018015623300012919SeawaterMKEDEDLLKVLLATETNGVPEKQLEGLIIKIEQQLGRVMANQNKLMLLQDITDQ*
Ga0160423_1055494123300012920Surface SeawaterMKEDEDLLKVLLATETNGVPEKQLEGLIIKIEQQLGRVMVNQNKFMLLQDITDQ*
Ga0163180_1002892563300012952SeawaterMKADEDLLKVLLATETNGVPEKQLEGLVIKIEQQLGRVMVNQNKLMLLQDITEQ*
Ga0163179_1040636523300012953SeawaterMMADEKLLRILLETETDGVPERQLDGLMIKIEQQLGRIMVNQNKLILLQDITDE*
Ga0181408_117621113300017760SeawaterLRLLLNTETEGVPERQLDGLIVKIEQQLGRIMVNQNKFLLLQDIADE
Ga0181432_113257723300017775SeawaterLKELLDVETDGTPYGQLDGLMVKIEQLLGRISLNQNKLMLLQELV
Ga0211553_1040754413300020415MarineVETETNGVPDRQLDGLFVKIEQLLSRISNNQNKIILLQDLKDE
(restricted) Ga0255051_1021844013300024057SeawaterNRILRTMMVEEKELRLLLSTETNGVPDQQLDGLFVKIEQLLARISNNQNKIILLQDLKDE
(restricted) Ga0255048_1009947033300024518SeawaterMMVEEKELRLLLSTETNGVPDQQLDGLFVKIEQLLARISNNQNKIILLQDLKDE
(restricted) Ga0255047_1037800433300024520SeawaterMMEDEKELKVLLNTETTGVPDEQLDGLFVKIEQLLGRVANNQNKIILLQSMREDDS
(restricted) Ga0255047_1038656613300024520SeawaterILRTMMVEEKELRVLLSTETNGVPDQQLDGLFVKIEQLLGRISTNQNKIILLQDLKDE
Ga0207878_10524253300025039MarineETETNGVPDRQLDGLFVKIEQLLARISNNQNKIILLQDLKDE
Ga0207878_12853913300025039MarineRVLLETETNGVPDRQLDGLFIKIEQLLARISNNQNKIILLQDLKDE
Ga0207889_103146723300025042MarineGIPDEQLDGLMVKIEQFLGRIMVNQNKLMLLQDIT
Ga0207902_100296133300025046MarineMMADEEELKQLLETETNGVPERQLDGLMVKIEQLLGRIMVNQNKIMLLQDIKDE
Ga0207902_103458423300025046MarineDEKALRELLEVETDGTPGAQLDGLMIRIEQLLGRISLNQNKLMLLQEIEA
Ga0207898_102046623300025049MarineGTPGAQLDGLMIRIEQLLGRISLNQNKLMLLQDIT
Ga0207898_102313013300025049MarineMKDEKALRELLEVETDGTPGAQLDGLMIRIEQLLGRISLNQNKLMLLQ
Ga0207898_103894513300025049MarineVPERQLDGLMVKIEQLLGRIMVNQNKIMLLQDIKDE
Ga0207892_102251813300025050MarineEQVRLLLGTETNGVPEEQLDGLMVKIEQLLGKIMVNQNKLMLLQDIV
Ga0207906_103802833300025052MarineMVEEKELRTLLETETNGVPDRQLDGLFVKIEQLLARISNNQNKIILLQDLKDE
Ga0207887_101902613300025069MarineTNGVPEEQLDGLMVRIEQLLGRIMVNQNKLMLLQDIKDE
Ga0207887_105342713300025069MarineRELLKVQTQGTPYAQLDGLIVKIEQLLNRLANNQNKLMLLQEIV
Ga0208156_107329213300025082MarineKKLRDLLEMETTGVPEQQLDGLMVKIEQLLGRIMVNQNKLMLLQDLV
Ga0208298_106999223300025084MarineQTMKKDEDLLKVLLATETNGVPEKQIDGLIIKIEQQLGRVMANQNKLMLLQDITDQ
Ga0208434_102925843300025098MarineDLLSTETNGVPDEQLDGLMIKIEQLLGRIMVNQNKIMLLQSVTEENDS
Ga0208793_106806213300025108MarineETHGVPERQLDGLLIKIEQQLGRIMVNQNKLILLQDITDQ
Ga0208793_118267823300025108MarineMMADEKSLRILLETETEGVPERQLDGLMVKIEQQLGRIMVNQNKLILLQDITDE
Ga0208793_118912213300025108MarineKELLKVETDGIPYEQLDGLMVKIEQLLGRISTNQDKIILLQDLT
Ga0209349_111969733300025112MarineMMADEKQLRLLLETETHGVPERQLDGLLIKIEQQLGRIMVNQNKLILLQDITDE
Ga0208790_101817873300025118MarineLLETETNGVPERQLDGLMVKIEQLLGRIMVNQNKLLLLQDITDE
Ga0209644_107590023300025125MarineRELLEVETDGTPGAQLDGLMIRIEQLLGRISLNQNKLMLLQELV
Ga0209644_112631113300025125MarineLLETETDGVPERQLDGLMIKIEQFLGRIMVNQNKLMLLQDIE
Ga0208919_115975923300025128MarineLSTETNGVPDEQLDGLMIKIEQLLGRIMVNQNKIMLLQSVTEENDS
Ga0209232_109548313300025132MarineTMMADEKSLRILLETETEGVPERQLDGLMVKIEQQLGRIMVNQNKLILLQDITDE
Ga0208299_109632533300025133MarineVPDRQLDGLIVKIEQQLGRIMVNQNKLLLLQEITEE
Ga0208299_120884213300025133MarineMIEEKELRVLLSTETNGVADRELDGLFVKIEQLLARISNNQNKIILLQDLKDE
Ga0207882_105136323300025218Deep OceanMMEDEKELRILLETETNDVPDQQLDGLMVKAEQLLSRVASNQNKIMLLQDIE
Ga0208030_101085563300025282Deep OceanMMEDEKKLRDLLEMETNGVPEAQLDGLMIKIEQLLGRIMVNQNKLMLLQDMQ
Ga0209757_1013824113300025873MarineLEVETDGTPGAQLDGLMIRIEQLLGRISLNQNKLMLLQELV
Ga0209757_1019420113300025873MarineRLLKRMMEDEKELRHLLATETNEVPEQQLDGLMVKIEQLLGRIMINQNKLMLLQDMV
Ga0209757_1025608213300025873MarineLLNTETDEIPDEQLDGLMVKIEQFLGRIMVNQNKLMLLQDIT
Ga0208451_101562133300026103Marine OceanicMMADEKELRVLLKTETNDVPEQQLDGLMVKIEQLLGRIMVNQNKIILLQSIGEEKEKDDEKRNDA
Ga0208451_104054013300026103Marine OceanicVTNRILRTMMVEEKELRLLLSTETDGVPDRQLDGLFIKIEQLLARISNNQNKIILLQDLKDE
Ga0208451_104898513300026103Marine OceanicDEKALRELLAVETDGTPYAQLDGLMIKIEQLLGRVVNNQNKIMLLQEIV
Ga0208879_128344523300026253MarineTNGVPERQLDGLMVKIDQFLGRIMVNQNKIMLLQDLKDE
Ga0208524_114191813300026261MarineELRVLLETETNGVPERQLDGLMVKIEQLLGRIMVNQNKLLLLQDITDE
Ga0209035_1025243413300027827MarineMEDEKQLRDLLSTETNGVPDRQLDGLFVKIEQLLARISNNQNKIILLQDLKDE
Ga0209089_1073562213300027838MarineTETNGVPDQQLDGLFVKIEQLLSRISNNQNKIILLQDLKDE
Ga0256382_106138523300028022SeawaterGVPDRQLDGLMVKIEQLLGRVANNQNKLMLLQDIEE
Ga0183748_107755413300029319MarineMMADEKSLRVLLETETDGIPEQQLDGLMIKIEQQLGRIMVNQNKLILLQDITDE
Ga0302119_1002486723300031606MarineMEEEKQLKVLLSTETNDVPDKQLDGLFVRIEQLLTRISNDQNKIILLQGIKEE
Ga0302120_1001853913300031701MarineRTMMVEEKELRVLLSTETNGVPDQQLDGLFVKIEQLLSRISNNQNKIILLQDLKDE
Ga0315316_1103837113300032011SeawaterLETETEGVPERQLDGLMVKIEQQLGRIMVNQNKLILLQDITDE
Ga0310345_1135535323300032278SeawaterKDEKALKELLALETEGTPYAQLDGLMVKIEQLLGRIVNNQNKIMLLQEIV
Ga0310345_1235679413300032278SeawaterMVEEKELRLLLETETNGVPDRQLDGLFVKIEQLLARISNNQNKIILLQDLKDE
Ga0315334_1012037063300032360SeawaterEKKLRELLEMETNSVPEQQLDGLMVKIEQLLGRIMVNQNKLMLLQDIV
Ga0310342_10307276713300032820SeawaterMDEKELRVLLETETNGVPDRQLDGLFIKIEQLLARISNNQNKIILLQDLKDE
Ga0314858_049854_300_4643300033742Sea-Ice BrineMMVEEKELRVLLSTETNGVPDQQLDGLFVKIEQLLSRISNNQNKIILLQDLKDE
Ga0326756_053169_4_1653300034629Filtered SeawaterMEDEKELRILLETETDGVPERQLDGLMIKVEQLLNRVANNQNKIMLLQDLKDE
Ga0326741_016515_1192_13293300034654Filtered SeawaterLRHLLATETNGVPEQQLDGLMVKIEQLLGRIMINQNKLMLLQDIV
Ga0326741_058538_222_3923300034654Filtered SeawaterMNKRTIKYVKELRGLLETETDGVPERQLDGLMIKVEQLLNRVANNQNKIMLLQDLV
Ga0326748_033144_1_1293300034656Filtered SeawaterETETDGVPDRQLDGLMIKVEQLLNRVANNQNKIMLLQDLKDE
Ga0326748_058407_33_1913300034656Filtered SeawaterMIVDEKELRILLETETNGIPDSQLDGLMIKVEQLLSRVANNQNKIMLLQDMQ


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.