Metagenome / Metatranscriptome Family F086304

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086304
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	76 residues
Representative Sequence	MIMIELNRVCKNSGRDEGKILLTGNTFAVTSEHRRWGKFERDICVVDNGTSNNGGYWVSESYEEICNMIKN
Number of Associated Samples	88
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	87.39 %
% of genes near scaffold ends (potentially truncated)	20.72 %
% of genes from short scaffolds (< 2000 bps)	65.77 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.77

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (42.342 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (30.631 % of family members)
Environment Ontology (ENVO)	Unclassified (84.685 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (99.099 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 9.09% β-sheet: 38.38% Coil/Unstructured: 52.53%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.77
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.77
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SCOP family	SCOP domain	Representative PDB	TM-score
b.55.1.1: Pleckstrin-homology domain (PH domain)	d1unqa_	1unq	0.57627
b.55.1.1: Pleckstrin-homology domain (PH domain)	d2fjla1	2fjl	0.56242
b.55.1.1: Pleckstrin-homology domain (PH domain)	d6tt2a_	6tt2	0.55691
b.55.1.5: Third domain of FERM	d2al6a2	2al6	0.55598
b.55.1.1: Pleckstrin-homology domain (PH domain)	d1wg7a1	1wg7	0.55302

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF04448	DUF551	8.11
PF00271	Helicase_C	7.21
PF13391	HNH_2	3.60
PF00176	SNF2-rel_dom	3.60
PF03592	Terminase_2	2.70
PF08279	HTH_11	1.80
PF13361	UvrD_C	1.80
PF11903	ParD_like	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG3728	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	2.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.66 %
Unclassified	root	N/A	42.34 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	42.34 %
Unclassified	root	N/A	42.34 %
cellular organisms	root	All Organisms → cellular organisms	15.32 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	42.34 %
Unclassified	root	N/A	42.34 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	14.41 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.90 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	42.34 %
Unclassified	root	N/A	42.34 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.60 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.90 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.90 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	42.34 %
Unclassified	root	N/A	42.34 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.90 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	0.90 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	42.34 %
Unclassified	root	N/A	42.34 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.70 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.90 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.90 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	42.34 %
Unclassified	root	N/A	42.34 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	2.70 %
unclassified Phycisphaerae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae	0.90 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.90 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	42.34 %
Unclassified	root	N/A	42.34 %
Pusillimonas (ex Stolz et al. 2005)	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005)	2.70 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.90 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.90 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	42.34 %
Unclassified	root	N/A	42.34 %
unclassified Pusillimonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005) → unclassified Pusillimonas	2.70 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.90 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.90 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	42.34 %
Unclassified	root	N/A	42.34 %
Pusillimonas sp. (ex Stolz et al. 2005)	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005) → unclassified Pusillimonas → Pusillimonas sp. (ex Stolz et al. 2005)	2.70 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.90 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.90 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001346\|JGI20151J14362_10036767	All Organisms → Viruses → Predicted Viral	2295	Open in IMG/M
3300001450\|JGI24006J15134_10010952	All Organisms → Viruses → Predicted Viral	4450	Open in IMG/M
3300001450\|JGI24006J15134_10040746	All Organisms → Viruses → Predicted Viral	1967	Open in IMG/M
3300001450\|JGI24006J15134_10115871	Not Available	935	Open in IMG/M
3300001450\|JGI24006J15134_10127049	Not Available	870	Open in IMG/M
3300001460\|JGI24003J15210_10055249	All Organisms → Viruses → Predicted Viral	1305	Open in IMG/M
3300001460\|JGI24003J15210_10091096	Not Available	895	Open in IMG/M
3300001460\|JGI24003J15210_10098570	Not Available	842	Open in IMG/M
3300001460\|JGI24003J15210_10104443	Not Available	803	Open in IMG/M
3300001460\|JGI24003J15210_10149475	Not Available	600	Open in IMG/M
3300001472\|JGI24004J15324_10002710	All Organisms → cellular organisms → Bacteria	6968	Open in IMG/M
3300001589\|JGI24005J15628_10039051	All Organisms → Viruses → Predicted Viral	1922	Open in IMG/M
3300003516\|Antartic2_1255023	Not Available	720	Open in IMG/M
3300004448\|Ga0065861_1161236	All Organisms → Viruses → Predicted Viral	1423	Open in IMG/M
3300004457\|Ga0066224_1320311	Not Available	969	Open in IMG/M
3300004460\|Ga0066222_1301914	Not Available	1331	Open in IMG/M
3300004461\|Ga0066223_1277641	Not Available	547	Open in IMG/M
3300005837\|Ga0078893_10759308	Not Available	837	Open in IMG/M
3300006735\|Ga0098038_1042531	All Organisms → Viruses → Predicted Viral	1662	Open in IMG/M
3300006735\|Ga0098038_1255305	Not Available	553	Open in IMG/M
3300006737\|Ga0098037_1031808	All Organisms → Viruses → Predicted Viral	1942	Open in IMG/M
3300006749\|Ga0098042_1014443	Not Available	2410	Open in IMG/M
3300006749\|Ga0098042_1032674	All Organisms → Viruses → Predicted Viral	1468	Open in IMG/M
3300006803\|Ga0075467_10002966	All Organisms → cellular organisms → Bacteria	13182	Open in IMG/M
3300006869\|Ga0075477_10190929	Not Available	842	Open in IMG/M
3300006870\|Ga0075479_10050848	All Organisms → Viruses → Predicted Viral	1769	Open in IMG/M
3300006919\|Ga0070746_10010146	All Organisms → cellular organisms → Bacteria	5355	Open in IMG/M
3300006920\|Ga0070748_1001088	All Organisms → cellular organisms → Bacteria	12820	Open in IMG/M
3300007236\|Ga0075463_10105606	Not Available	909	Open in IMG/M
3300007345\|Ga0070752_1346588	Not Available	558	Open in IMG/M
3300007954\|Ga0105739_1174956	Not Available	516	Open in IMG/M
3300007992\|Ga0105748_10223927	Not Available	786	Open in IMG/M
3300009428\|Ga0114915_1012270	All Organisms → Viruses → Predicted Viral	3231	Open in IMG/M
3300009593\|Ga0115011_10071894	All Organisms → Viruses → Predicted Viral	2395	Open in IMG/M
3300009790\|Ga0115012_10324624	All Organisms → Viruses → Predicted Viral	1164	Open in IMG/M
3300010148\|Ga0098043_1060623	Not Available	1143	Open in IMG/M
3300010148\|Ga0098043_1111852	Not Available	791	Open in IMG/M
3300012919\|Ga0160422_10034435	Not Available	2935	Open in IMG/M
3300012919\|Ga0160422_10072141	All Organisms → Viruses → Predicted Viral	2015	Open in IMG/M
3300012920\|Ga0160423_10005051	Not Available	10798	Open in IMG/M
3300012952\|Ga0163180_10005499	All Organisms → cellular organisms → Bacteria	7011	Open in IMG/M
3300013010\|Ga0129327_10008710	Not Available	5614	Open in IMG/M
3300017697\|Ga0180120_10080596	All Organisms → Viruses → Predicted Viral	1434	Open in IMG/M
3300017710\|Ga0181403_1003325	All Organisms → Viruses → Predicted Viral	3596	Open in IMG/M
3300017717\|Ga0181404_1005488	All Organisms → Viruses → Predicted Viral	3469	Open in IMG/M
3300017730\|Ga0181417_1107638	Not Available	674	Open in IMG/M
3300017731\|Ga0181416_1053180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005) → unclassified Pusillimonas → Pusillimonas sp. (ex Stolz et al. 2005)	956	Open in IMG/M
3300017734\|Ga0187222_1008970	All Organisms → Viruses → Predicted Viral	2507	Open in IMG/M
3300017743\|Ga0181402_1065094	Not Available	967	Open in IMG/M
3300017744\|Ga0181397_1065408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	986	Open in IMG/M
3300017745\|Ga0181427_1084451	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	777	Open in IMG/M
3300017749\|Ga0181392_1060144	All Organisms → Viruses → Predicted Viral	1160	Open in IMG/M
3300017751\|Ga0187219_1066486	All Organisms → Viruses → Predicted Viral	1153	Open in IMG/M
3300017752\|Ga0181400_1082739	Not Available	958	Open in IMG/M
3300017753\|Ga0181407_1155962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005) → unclassified Pusillimonas → Pusillimonas sp. (ex Stolz et al. 2005)	562	Open in IMG/M
3300017756\|Ga0181382_1073872	Not Available	949	Open in IMG/M
3300017758\|Ga0181409_1053519	All Organisms → Viruses → Predicted Viral	1239	Open in IMG/M
3300017758\|Ga0181409_1071160	All Organisms → Viruses → Predicted Viral	1054	Open in IMG/M
3300017760\|Ga0181408_1051284	All Organisms → Viruses → Predicted Viral	1103	Open in IMG/M
3300017760\|Ga0181408_1166946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005) → unclassified Pusillimonas → Pusillimonas sp. (ex Stolz et al. 2005)	564	Open in IMG/M
3300017765\|Ga0181413_1226561	Not Available	554	Open in IMG/M
3300017770\|Ga0187217_1015852	All Organisms → Viruses → Predicted Viral	2725	Open in IMG/M
3300017770\|Ga0187217_1075332	All Organisms → Viruses → Predicted Viral	1160	Open in IMG/M
3300017776\|Ga0181394_1075953	All Organisms → Viruses → Predicted Viral	1096	Open in IMG/M
3300017781\|Ga0181423_1205491	Not Available	745	Open in IMG/M
3300017782\|Ga0181380_1033977	All Organisms → Viruses → Predicted Viral	1861	Open in IMG/M
3300017783\|Ga0181379_1157434	Not Available	808	Open in IMG/M
3300018041\|Ga0181601_10104462	All Organisms → Viruses → Predicted Viral	1823	Open in IMG/M
3300018577\|Ga0194245_1002521	Not Available	721	Open in IMG/M
3300020174\|Ga0181603_10347915	Not Available	557	Open in IMG/M
3300020175\|Ga0206124_10374228	Not Available	533	Open in IMG/M
3300020252\|Ga0211696_1000013	All Organisms → cellular organisms → Bacteria	39414	Open in IMG/M
3300020276\|Ga0211509_1115307	Not Available	606	Open in IMG/M
3300020349\|Ga0211511_1153394	Not Available	514	Open in IMG/M
3300020365\|Ga0211506_1026897	All Organisms → Viruses → Predicted Viral	1638	Open in IMG/M
3300020385\|Ga0211677_10089958	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1351	Open in IMG/M
3300020388\|Ga0211678_10253875	Not Available	725	Open in IMG/M
3300020403\|Ga0211532_10011009	Not Available	5618	Open in IMG/M
3300020413\|Ga0211516_10001400	All Organisms → cellular organisms → Bacteria	18726	Open in IMG/M
3300020419\|Ga0211512_10148238	All Organisms → Viruses → Predicted Viral	1087	Open in IMG/M
3300020421\|Ga0211653_10212143	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300020428\|Ga0211521_10146879	All Organisms → Viruses → Predicted Viral	1105	Open in IMG/M
3300020428\|Ga0211521_10521919	Not Available	507	Open in IMG/M
3300020440\|Ga0211518_10002920	All Organisms → cellular organisms → Bacteria	13031	Open in IMG/M
3300020463\|Ga0211676_10000993	Not Available	30242	Open in IMG/M
3300020469\|Ga0211577_10411272	Not Available	834	Open in IMG/M
3300020469\|Ga0211577_10488445	Not Available	748	Open in IMG/M
3300021347\|Ga0213862_10022587	All Organisms → Viruses → Predicted Viral	2345	Open in IMG/M
3300021347\|Ga0213862_10083761	All Organisms → Viruses → Predicted Viral	1125	Open in IMG/M
3300021964\|Ga0222719_10381351	Not Available	883	Open in IMG/M
3300022072\|Ga0196889_1010033	All Organisms → Viruses → Predicted Viral	2091	Open in IMG/M
3300022074\|Ga0224906_1013977	All Organisms → Viruses → Predicted Viral	3029	Open in IMG/M
3300025048\|Ga0207905_1005271	All Organisms → Viruses → Predicted Viral	2429	Open in IMG/M
3300025048\|Ga0207905_1032150	Not Available	848	Open in IMG/M
3300025071\|Ga0207896_1002036	All Organisms → Viruses → Predicted Viral	3877	Open in IMG/M
3300025086\|Ga0208157_1033109	All Organisms → Viruses → Predicted Viral	1479	Open in IMG/M
3300025101\|Ga0208159_1005296	All Organisms → Viruses → Predicted Viral	3968	Open in IMG/M
3300025101\|Ga0208159_1073518	Not Available	658	Open in IMG/M
3300025120\|Ga0209535_1002820	All Organisms → cellular organisms → Bacteria	11271	Open in IMG/M
3300025120\|Ga0209535_1007446	All Organisms → cellular organisms → Bacteria	6468	Open in IMG/M
3300025120\|Ga0209535_1037606	All Organisms → Viruses → Predicted Viral	2203	Open in IMG/M
3300025120\|Ga0209535_1164091	Not Available	679	Open in IMG/M
3300025120\|Ga0209535_1172154	Not Available	650	Open in IMG/M
3300025137\|Ga0209336_10011412	All Organisms → Viruses → Predicted Viral	3488	Open in IMG/M
3300025168\|Ga0209337_1052601	All Organisms → Viruses → Predicted Viral	2104	Open in IMG/M
3300025276\|Ga0208814_1013470	All Organisms → Viruses → Predicted Viral	2864	Open in IMG/M
3300025696\|Ga0209532_1011984	Not Available	4546	Open in IMG/M
3300027906\|Ga0209404_10051340	All Organisms → Viruses → Predicted Viral	2335	Open in IMG/M
3300029318\|Ga0185543_1012524	All Organisms → Viruses → Predicted Viral	2076	Open in IMG/M
3300029448\|Ga0183755_1050203	All Organisms → Viruses → Predicted Viral	1055	Open in IMG/M
3300032073\|Ga0315315_10309796	All Organisms → Viruses → Predicted Viral	1471	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	36.94%
Strait	Environmental → Aquatic → Marine → Strait	22.52%
Unclassified	Environmental → Aquatic → Marine → Unclassified	18.02%
Coastal	Environmental → Aquatic → Marine → Coastal	17.12%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.70%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	1.80%
Pelagic	Environmental → Aquatic → Marine → Pelagic	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	33.33%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	22.52%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	18.02%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	17.12%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	3.60%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	1.80%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.90%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	30.63%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	22.52%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	17.12%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	7.21%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	3.60%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	1.80%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	1.80%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	1.80%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.80%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	1.80%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	1.80%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	1.80%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.90%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	0.90%
Freshwater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Freshwater	0.90%
Marine Surface Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water	0.90%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.90%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.90%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001346	Pelagic Microbial community sample from North Sea - COGITO 998_met_01	Environmental	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental	Open in IMG/M
3300001472	Marine viral communities from the Pacific Ocean - LP-32	Environmental	Open in IMG/M
3300001589	Marine viral communities from the Pacific Ocean - LP-40	Environmental	Open in IMG/M
3300003516	Marine microbial communities from Antarctic ocean - Station_363 -- 0.8 um	Environmental	Open in IMG/M
3300004448	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004457	Marine viral communities from Newfoundland, Canada MC-1	Environmental	Open in IMG/M
3300004460	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004461	Marine viral communities from Newfoundland, Canada BC-2	Environmental	Open in IMG/M
3300005837	Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006749	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG	Environmental	Open in IMG/M
3300006803	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNA	Environmental	Open in IMG/M
3300006869	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA	Environmental	Open in IMG/M
3300006870	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA	Environmental	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental	Open in IMG/M
3300007236	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA	Environmental	Open in IMG/M
3300007345	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30	Environmental	Open in IMG/M
3300007954	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373B_0.2um	Environmental	Open in IMG/M
3300007992	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2um	Environmental	Open in IMG/M
3300009428	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55	Environmental	Open in IMG/M
3300009593	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome	Environmental	Open in IMG/M
3300009790	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome	Environmental	Open in IMG/M
3300010148	Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaG	Environmental	Open in IMG/M
3300012919	Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaG	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300012952	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 Metagenome	Environmental	Open in IMG/M
3300013010	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNA	Environmental	Open in IMG/M
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental	Open in IMG/M
3300017710	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28	Environmental	Open in IMG/M
3300017717	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25	Environmental	Open in IMG/M
3300017730	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 40 SPOT_SRF_2013-02-13	Environmental	Open in IMG/M
3300017731	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16	Environmental	Open in IMG/M
3300017734	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24 (version 2)	Environmental	Open in IMG/M
3300017743	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17	Environmental	Open in IMG/M
3300017744	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23	Environmental	Open in IMG/M
3300017745	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 50 SPOT_SRF_2014-01-15	Environmental	Open in IMG/M
3300017749	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15	Environmental	Open in IMG/M
3300017751	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)	Environmental	Open in IMG/M
3300017752	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 23 SPOT_SRF_2011-06-22	Environmental	Open in IMG/M
3300017753	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26	Environmental	Open in IMG/M
3300017756	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22	Environmental	Open in IMG/M
3300017758	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30	Environmental	Open in IMG/M
3300017760	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16	Environmental	Open in IMG/M
3300017765	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28	Environmental	Open in IMG/M
3300017770	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 (version 2)	Environmental	Open in IMG/M
3300017776	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23	Environmental	Open in IMG/M
3300017781	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14	Environmental	Open in IMG/M
3300017782	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19	Environmental	Open in IMG/M
3300017783	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10	Environmental	Open in IMG/M
3300018041	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)	Environmental	Open in IMG/M
3300018577	Eukaryotic communities of water from different depths collected during the Tara Oceans expedition - TARA_N000000618 (ERX1086440-ERR1007417)	Environmental	Open in IMG/M
3300020174	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041409US metaG (spades assembly)	Environmental	Open in IMG/M
3300020175	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2	Environmental	Open in IMG/M
3300020252	Marine prokaryotic communities collected during Tara Oceans survey from station TARA_078 - TARA_B100000524 (ERX555968-ERR599022)	Environmental	Open in IMG/M
3300020276	Marine microbial communities from Tara Oceans - TARA_E500000075 (ERX289007-ERR315858)	Environmental	Open in IMG/M
3300020349	Marine microbial communities from Tara Oceans - TARA_E500000081 (ERX289006-ERR315859)	Environmental	Open in IMG/M
3300020365	Marine microbial communities from Tara Oceans - TARA_B100000034 (ERX555943-ERR599143)	Environmental	Open in IMG/M
3300020385	Marine microbial communities from Tara Oceans - TARA_B100001059 (ERX556045-ERR598965)	Environmental	Open in IMG/M
3300020388	Marine microbial communities from Tara Oceans - TARA_B100001063 (ERX555965-ERR599064)	Environmental	Open in IMG/M
3300020403	Marine microbial communities from Tara Oceans - TARA_B100000085 (ERX556015-ERR599145)	Environmental	Open in IMG/M
3300020413	Marine microbial communities from Tara Oceans - TARA_S200000501 (ERX555962-ERR599092)	Environmental	Open in IMG/M
3300020419	Marine microbial communities from Tara Oceans - TARA_X000000263 (ERX555964-ERR598955)	Environmental	Open in IMG/M
3300020421	Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556005-ERR599007)	Environmental	Open in IMG/M
3300020428	Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)	Environmental	Open in IMG/M
3300020440	Marine microbial communities from Tara Oceans - TARA_E500000178 (ERX555952-ERR599043)	Environmental	Open in IMG/M
3300020463	Marine microbial communities from Tara Oceans - TARA_B100001057 (ERX555988-ERR599050)	Environmental	Open in IMG/M
3300020469	Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)	Environmental	Open in IMG/M
3300021347	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO266	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022072	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3)	Environmental	Open in IMG/M
3300022074	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)	Environmental	Open in IMG/M
3300025048	Marine viral communities from the Subarctic Pacific Ocean - LP-49 (SPAdes)	Environmental	Open in IMG/M
3300025071	Marine viral communities from the Pacific Ocean - LP-36 (SPAdes)	Environmental	Open in IMG/M
3300025086	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)	Environmental	Open in IMG/M
3300025101	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG (SPAdes)	Environmental	Open in IMG/M
3300025120	Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)	Environmental	Open in IMG/M
3300025137	Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)	Environmental	Open in IMG/M
3300025168	Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)	Environmental	Open in IMG/M
3300025276	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 (SPAdes)	Environmental	Open in IMG/M
3300025696	Pelagic Microbial community sample from North Sea - COGITO 998_met_02 (SPAdes)	Environmental	Open in IMG/M
3300027906	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)	Environmental	Open in IMG/M
3300029318	Marine giant viral communities collected during Tara Oceans survey from station TARA_038 - TARA_Y100000289	Environmental	Open in IMG/M
3300029448	Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082	Environmental	Open in IMG/M
3300032073	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20151J14362_1003676710	3300001346	Pelagic Marine	MIILELNRVCKSSGRDEGKIFLTGNTFAVTSEYHRWGKFERDICVVDNGNSNNGGYWVSDSYGXIVSVIEEQXGXC*
JGI24006J15134_100109522	3300001450	Marine	MTHKIIELSRVCRTTGRDDGKIMLTGDTFTVEHSHRKWGTLERDICIVDNGISNNGGYWVSESYEDICYVISNDRVRTC*
JGI24006J15134_100407461	3300001450	Marine	MYRAIELSRVCRTTGRDDGKIMLTGDTFTVEHSHRKWGTLERDICIVDNGISNNGGYWVSESYEDICSLITGYYGHK
JGI24006J15134_101158714	3300001450	Marine	MIAIELSRVCRTTGRDDGKIMLTGDTFTVEHSHRKWGTLERDICVVDNGNSNNGGYWVSESFEDICECISRGVT*
JGI24006J15134_101270492	3300001450	Marine	MTHKIIELSRICKNSGRNEGKILLTGNTFAVTSEHRRWGKFERDICVVDNGISNNGGYWVSESYEDICSLITGYYGHKGHI*
JGI24003J15210_100552494	3300001460	Marine	MYRAIELSRVCRTTGRDDGKIMLTGDTFTVEHSHRKWGTLERDICIVDNGISNNGGYWVSESYEDICYVISNDRVRTC*
JGI24003J15210_100910963	3300001460	Marine	MIMLELSRICKNSGCDEGKILLTGTTFAVTSEHRRWGKFERDICVVDNGTSNNGGYWVSDSYDDVCDMIAIEAEKFHTSGDTR*
JGI24003J15210_100985702	3300001460	Marine	MIILELTRVCKNSGREEEKIFLTGNTFAVTKEHRRWGKFERDICVVDNGTSNNGGYWVADSYERICESIKYQDLHSN*
JGI24003J15210_101044432	3300001460	Marine	MTHKIIELSRVCRTTGRDDGKIMLTGDTFTVEHSHRKWGTLERDICIVDNGISNNGGYWVSESYEDICSLITGYYGHKGHI*
JGI24003J15210_101494752	3300001460	Marine	MIMLELNRVCRTTGRDNGKLLLTGDTFTVQCDHRRWGKLERDICVVDNGTGNNGGYWVSDSYGNIVSLIEEQSDERDKINGQGHPHS*
JGI24004J15324_1000271014	3300001472	Marine	MYRAIELSRVCRTTGRDDGKIMLTGDTFTVEXSHRKWGTLERDICIVDNGISNNGGYWVSESYEDICYVISNDRVRTC*
JGI24005J15628_100390515	3300001589	Marine	SRICKNSGRNEGKILLTGNTFAVTSEHRRWGKFERDICVVDNGISNNGGYWVSESYEDICSLITGYYGHKGHI*
Antartic2_12550232	3300003516	Freshwater	MIMLKLNRVCRTTGRDNGKIILTGNTFSVYTETRRWGTTELDICVVDNGTSNNAGYWVSDSYNDIENMMIRDRS*
Ga0065861_11612364	3300004448	Marine	MTHRAIELSRVCRTTGRDDGKIMLTGNTFTVEHSHRKWGTLERDICIVDNGISNNGGYWVSESYEDICYVIAQNRVRRC*
Ga0066224_13203112	3300004457	Marine	MTHRAIELSRVCRTTGRDDGKIMLTGDTFTVEHSHRKWGTLERDICIVDNGISNNAGYWVSESYEDICYVIAQNRVRRC*
Ga0066222_13019143	3300004460	Marine	MTHRAIELSRVCRTTGRDDGKIMLTGDTFTVEHSHRKWGTLERDICIVDNGISNNGGYWVSESYEDICYVIAQNRVRRC*
Ga0066223_12776412	3300004461	Marine	MIMLELSRICKNSGRNEGKILLTGTTFAVTSEHRRWGKFERDICVVDNGTSNNGGYWVAESYNEIELMMVRDRS*
Ga0078893_107593083	3300005837	Marine Surface Water	MIMLELSRICKSSGRNEGKILLTGTTFAVTSEYHRWGKFERDICVVDNGTSNNGGYWVSESYEEICENIKYQDLHST*
Ga0098038_10425313	3300006735	Marine	MIILELTRVCKNSGREEEKIFLTGNTFAVTKEHRRWGKFERDICVVDNGTSNNGGYWVSNSYDDVCDMIAIEAEKFHTSGDTR*
Ga0098038_12553052	3300006735	Marine	MKSIELTRVCRTTGLDDGKIFLTGDTFCVSSETRKWGALERDICIVDNGTHNNGGYWVAESYEDICELISGGRVRRCG*
Ga0098037_10318083	3300006737	Marine	MIMLELTSVCRSSGREEGKVLLTGDTFSVSASSHRWGKFERDICIVDNGTHNNGGYWVAESYEDICELISGGRVRRCG*
Ga0098042_10144432	3300006749	Marine	MIILELTSVCRATGLDDGKIFLTGTTFYLSTETRKWGALERDICIVDNGTHNNGGYWVAESYEDICELISGGRVRRCG*
Ga0098042_10326743	3300006749	Marine	MIILELTRVCKNSGREEEKIFLTGNTFAVTKEHRRWGKFERDICVVDNGTSNNGGYWVSNSYDDVCDMIAIEAEKFHTNGDTR*
Ga0075467_1000296624	3300006803	Aqueous	MITLELSRICKNSGRDEGKILLTGTTFAVTSEHRRWGKFERDICVVDNGTSNNGGYWVAESYEDIRGYMSRRVT*
Ga0075477_101909293	3300006869	Aqueous	MITLELSRICKNSGRNEGKILLTGTTFAVTSEHRRWGKFERDICVVNNGTSNNGGYWVSESYEDIRG
Ga0075479_100508484	3300006870	Aqueous	MITLELSRICKNSGRNEGKILLTGTTFAVTSEHRRWGKFERDICVVDNGTSNNGGYWVAESYNEIELMMVRDRS*
Ga0070746_100101467	3300006919	Aqueous	MITLELSRICKNSGRNEGKILLTGTTFAVTSEHRRWGKFERDICVVNNGTSNNGGYWVAESYEDIRGYMSRRVT*
Ga0070748_10010881	3300006920	Aqueous	MITLELSRICKNSGRNEGKILLTGTTFAVTSEHRRWGKFERDICVVNNGTSNNGGYWVSESYEDIRGYMSRRVT*
Ga0075463_101056061	3300007236	Aqueous	SGRDEGKILLTGTTFAVTSEHRRWGKFERDICVVNNGTSNNGGYWVSESYEDIRGYMSRRVT*
Ga0070752_13465881	3300007345	Aqueous	MITLELSRICKNSGRDEGKILLTGTTFAVTSEHRRWGKFERDICVVDNGTSNNGGYWVAESYNEIELMMVRDRS*
Ga0105739_11749562	3300007954	Estuary Water	MLTLELNRVCRSTGRDNGKIFLTGNTFCVHTETRRWGKTELDICIVDNGTHNNGGYWVSDSYGNIVSMIEEQTGRC*
Ga0105748_102239274	3300007992	Estuary Water	TMIILELTRVCRTTGRDDGKVFLTGDTFCVTSVTRKWGKLERDTCIVDNGTHNNGGYWVSDSYGNIVSMIEEQTGRC*
Ga0114915_10122702	3300009428	Deep Ocean	MIMLELNRVCRTTGRDNGKIILTGNTFSVYTETRRWGTTELDICVVDNGTSNNAGYWVSDSYNDIENMMIRDRS*
Ga0115011_100718945	3300009593	Marine	MIILELTRVCSSSGREDGKVLLTGDTFCVSQSSHRWGTFERDICIVDNGTHNNGGYWVSDSYERICESIKYQDLHST*
Ga0115012_103246241	3300009790	Marine	MIILELTRVCRTTGLDDGKVFLTGNTFCVSPVTRKWGALERDICIVDNGTHNNGGYWVSDSYERICESIKYQDLHST*
Ga0098043_10606233	3300010148	Marine	MIILELTRVCRTTGLDDGKIFLTGDTFCVSSETRKWGALERDICIVDNGTHNNGGYWVAESYEDICELISGGRVRRCG*
Ga0098043_11118522	3300010148	Marine	MIILELTSVCRTTGLDEGKIFLTGTTFYVSTENRKWGALERDICIVDNGTHGGGGYWVSDSYERICESIKYQDLHST*
Ga0160422_100344353	3300012919	Seawater	MIILELTRVCRTTGLDDGKIFLTGNTFCVSSETRKWGALERDICIVDNGTHNNGGYWVSDSYERICESIKYQDLHST*
Ga0160422_100721416	3300012919	Seawater	MIILELTRVCRTSGRDDGKVFLTGDTFCVSASTHRWGTFEREICIVDNGTHNNGGYWVAESYGNIVSVIEEQTAR*
Ga0160423_1000505119	3300012920	Surface Seawater	MIILELTRVCRTSGRDDGKVFLTGDTFCVSQSSHRWGKFERDICIVDNGTHNNGGYWVSDSYGNIVSMIEEQTGRC*
Ga0163180_1000549914	3300012952	Seawater	MITLELSRICKNSGRDEGKIFLTGTTFAVTSEYHRWGKFERDICVVNNGTSNNGGYWVSDSYGNIVSMIEEQLRGARNE*
Ga0129327_1000871011	3300013010	Freshwater To Marine Saline Gradient	MIMLELSRICKNSGRNEGKILLTGTTFAVTSEHRRWGKFERDICVVDNGTSNNGGYWVAESYEDIRGYMSRRVT*
Ga0180120_100805964	3300017697	Freshwater To Marine Saline Gradient	MITLELSRICKNSGRNEGKILLTGTTFAVTSEHRRWGKFERDICVVDNGTSNNGGYWVAESYEDIRGYMSRRVT
Ga0181403_10033256	3300017710	Seawater	MIMLELSRICKNSGCDEGKILLTGTTFAVTSEHRRWGKFERDICVVDNGTSNNGGYWVSESYEEICNMIKN
Ga0181404_10054884	3300017717	Seawater	MIMLELSRICKNSGRNEGKILLTGNTFAVTSEHRRWGKFERDICVVDNGTSNNGGYWVSESYEEICNMIKN
Ga0181417_11076383	3300017730	Seawater	MIMIELNRVCKNSGRDEGKILLTGTTFAVTSEHRRWGKFERDICVVDNGTSNNGGYWVSNSYNDI
Ga0181416_10531802	3300017731	Seawater	MIMIELNRVCKNSGRDEGKILLTGNTFAVTSEHRRWGKFERDICVVDNGTSNNGGYWVSESYEEICNMIKN
Ga0187222_10089708	3300017734	Seawater	MIILELTRVCRTTGRDDGKTFLTGTAFCVSPVTRKWGKLERDICIVDNGTHNNGGYWVSDSYGNI
Ga0181402_10650944	3300017743	Seawater	MIMIELNRVCKNSGRDEGKILLTGNTFAVTSEHRRWGKFERDICVVDNGTSNNGGYWVS
Ga0181397_10654083	3300017744	Seawater	LTRVCRTTGRDDGKTFLTGTAFCVSPVTRKWGKLERDICIVDNGTHNNGGYWVSDSYGNIVSMIEEQAGRC
Ga0181427_10844511	3300017745	Seawater	MIMIELNRVCKNSGRDEGKILLTGNTFAVTSEHRRWGKFERDICVVDNGTSNNGGYWVSNSYNDI
Ga0181392_10601444	3300017749	Seawater	MIMLELSRICKNSGRDEGKILLTGTTFAVTSEHRRWGKFERDICVVDNGTSNNGGYWVSDSYDDVCDMIAIETEKFHTSGDTR
Ga0187219_10664864	3300017751	Seawater	MIMLELSRICKNSGRDEGKILLTGTTFAVTSEHRRWGKFERDICVVDNGTSNNGGYWVSDSYDDVCDMIAIEAEKFHTSGDT
Ga0181400_10827391	3300017752	Seawater	MIELNRVCKNSGRDEGKILLTGNTFAVTSEHRRWGKFERDICVVDNGTSNNGGYWVSNSYNDIEDMMIRDRS
Ga0181407_11559622	3300017753	Seawater	MIMLELSRICKNSGRNEGKILLTGNTFAVTSEHRRWGKFERDICVVDNGTSHNGGYWVSDSYEEICNMIKN
Ga0181382_10738724	3300017756	Seawater	LKMITLELNRVCRLTGRDNGKIFMTGDTFCVHTETRRWGKTELDICIVDNGTSNNGGYWVSDSYERICESIKYQDLHSN
Ga0181409_10535193	3300017758	Seawater	MIMLELSRICKNSGRDEGKILLTGTTFAVTSEHRRWGKFERDICVVDNGTSNNGGYWVSESYNDIEDMMIRDRS
Ga0181409_10711603	3300017758	Seawater	MLTLELNRVCRSTGRDNGKIFLTGNTFCVHTETRRWGKTELDICIVDNGTSNNGGYWVSDSYERICESIKYQDLHSN
Ga0181408_10512841	3300017760	Seawater	ELNRVCKNSGRDEGKILLTGNTFAVTSEHRRWGKFERDICVVDNGTSNNGGYWVSNSYNDIEDMMIRDRS
Ga0181408_11669461	3300017760	Seawater	ELNRVCKNSGRDEGKILLTGNTFAVTSEHRRWGKFERDICVVDNGTSNNGGYWVSESYEEICNMIKN
Ga0181413_12265613	3300017765	Seawater	MIMLELSRICKNSGRNEGKILLTGNTFAVTSEHRRWGKFERDICVVDNGTSNNGGYWVSESYNEIELMMVRDRS
Ga0187217_10158522	3300017770	Seawater	MTHKIIELSRVCRTTGRDDGKIMLTGDTFTVEHSHRKWGTLERDICVVDNGISNNGGYWVSESYEDICYVISKDRVRTC
Ga0187217_10753324	3300017770	Seawater	MIMLELSRICKNSGCDEGKILLTGTTFAVTSEHRRWGKFERDICVVDNGTSNNGGYWVSDSYDDVCDMIAIETEKFHTSGDTR
Ga0181394_10759533	3300017776	Seawater	MIILELTRVCRTTGRDDGKTFLTGTAFCVSPVTLKWGKLERDICIVDNGTHNNGGYWVSDSYGNIVSMIEEQAGRC
Ga0181423_12054911	3300017781	Seawater	MITLELNRVCRLTGRDNGKIFITGNTFCVHTETRRWGKTELDICIVDNGTSNNGGYWVSDSYERICESIKYQDLHSS
Ga0181380_10339777	3300017782	Seawater	MLTLELNRVCRSTGRDNGKIFLTGNTFCVHTETRRWGKTELDICIVDNGTSNNGGYWVSDSYERIRESIKYQDLHSN
Ga0181379_11574341	3300017783	Seawater	MIMLELSRICKNSGRDEGKILLTGTTFAVTSEHRRWGKFERDICVVDNGTSNNGGYWVSESYNEIELM
Ga0181601_101044625	3300018041	Salt Marsh	MIILELTRVCKNSGREEEKIFLTGNTFAVTKEHRRWGKFERDICVVNNGTSNNGGYWVSDSYERICESIKYQDLHST
Ga0194245_10025211	3300018577	Marine	VCKSTKVTTGRWKLYGRLTMIILELTRVCRSSGREDGKVLLTGDTFCVSQSSHRWGTFERDICIVDNGTHNNGGYWVADSYDDICESIKYQDLLVQKLRGARNE
Ga0181603_103479153	3300020174	Salt Marsh	RVCKNSGREEEKIFLTGNTFAVTKEHRRWGKFERDICVVNNGTSNNGGYWVSDSYERICESIKYQDLHST
Ga0206124_103742282	3300020175	Seawater	MYRAIELSRVCRTTGRDDGKIMLTGDTFTVEHSHRKWGTLERDICIVDNGISNNGGYWVSESFEDICYVISRDTVRRC
Ga0211696_100001317	3300020252	Marine	MIILELTRVCRSSGREDGKVLLTGDTFCVSQSSHRWGTFERDICIVDNGTHNNGGYWVADSYDDICESIKYQDLLVQKLRGARNE
Ga0211509_11153073	3300020276	Marine	MIILELNRVCKSSGRDEGKIFLTGSTFAVTSEYHRWGKFERDICVVDNGNSNNGGYWVSDSYGSIVSVIEEQTGRC
Ga0211511_11533941	3300020349	Marine	LELSRICKNSGRNEGKILLTGTTFAVTSEHRRWGKFERDICVVNNGTSNNGGYWVAESYNEIELMMVRDRS
Ga0211506_10268975	3300020365	Marine	MIILELTRVCRTSGRDDGKVLLTGDTFCVSQSSHRWGTFERDICIVDNGTHNNGGYWVADSYDDICESIKYQDLLVQKLRGARNE
Ga0211677_100899584	3300020385	Marine	MIMLELTCVCRTSGRDEGKVFLTGDTFCVSQSSHRWGTFERDICIVDNGTHNNGGYWVSDSYERICESIKYQDLHST
Ga0211678_102538753	3300020388	Marine	MIMLELTCVCRTSGRDDGKVFLTGDTFCVSQSSHRWGTFERDICIVDNGTHNNGGYWVSDSYERICESIKYQDLHST
Ga0211532_1001100913	3300020403	Marine	MIMLELTRVCRTSGRDDGKVFLTGDTFCVSESSHRWGTFERDICIVDNGTHNNGGYWVAESYGNIVSVIEEQTGRCG
Ga0211516_1000140022	3300020413	Marine	MIILELTRVCRTSGRDDGKVLLTGDTFCVTSVTRKWGKLERDTCIVDNGTHNNGGYWVSDSYERICESIKYQDLHST
Ga0211512_101482384	3300020419	Marine	MITLELSRICKNSGRDEGKIFLTGTTFAVTSEYHRWGKFERDICVVNNGTSNNGGYWVSDSYGNIVSMI
Ga0211653_102121434	3300020421	Marine	SRKMIILELTSVCRATGLDDGKIFLTGDTFCVSSETRKWGALERDICIVDNGTHGGGGYWVSDSYERICESIKYQDLHSN
Ga0211521_101468794	3300020428	Marine	MIMLELSRICKNSGRNEGKILLTGTTFAVTSEHRRWGKFERDICVVNNGTSNNGGYWVSESYNEIELMMVRDRS
Ga0211521_105219191	3300020428	Marine	MIMLELNRVCSISGREEGKVLLTGDTFSVFAKSHRWGKFERDICIVNNGTHNNGGYWVSDSYGNIVSMIEEQTGR
Ga0211518_1000292020	3300020440	Marine	MIILELNRVCKSSGRDEGKIFLTGNTFAVTSEYHRWGKFERDICVVDNGNSNNGGYWVSDSYGSIVSVIEEQTGRC
Ga0211676_1000099354	3300020463	Marine	MIILELNRVCKSSGRDEGKILLTGNTFAVTSEYHRWGKFERDICVVNNGTSNNGGYWVSDSYGNIVSVIEEQTGRC
Ga0211577_104112723	3300020469	Marine	MIMLELSRICKNSGCDEGKILLTGTTFAVTSEHRRWGKFERDICVVDNGTSNNGGYWVSESYNEIELMMVRDRS
Ga0211577_104884452	3300020469	Marine	MIILELTRVCRTTGRDDGKTFLTGTAFCVSPVTRKWGKLERDICIVDNGTHNNGGYWVSDSYGNIVSMIEEQAGRC
Ga0213862_100225877	3300021347	Seawater	MIMLELTRVCRTSGRDDGKVFLTGDTFCVTSVTRKWGKLERDTCIVDNGTHNNGGYWVADSYGNIVSMIEEQTGRCA
Ga0213862_100837613	3300021347	Seawater	MITLELSRICKNSGRNEGKILLTGTTFAVTSEHRRWGKFERDICVVNNGTSNNGGYWVSESYEDIRGYMSRRVT
Ga0222719_103813513	3300021964	Estuarine Water	MKAIELSRVCRTTGRDNGKILLTGNTFVIYTETRRWGQLERDICVVDNGISNNAGYWVSESYEAICEKIKYGGSHG
Ga0196889_10100335	3300022072	Aqueous	MITLELSRICKNSGRDEGKILLTGTTFAVTSEHRRWGKFERDICVVDNGTSNNGGYWVAESYEDIRGYMSRRVT
Ga0224906_10139779	3300022074	Seawater	MIMIELNRVCKNSGRDEGKILLTGNTFAVTSEHRRWGKFERDICVVDNGTSNNGGYWVSNSYNDIEDMMIRDRS
Ga0207905_10052715	3300025048	Marine	MIAIELSRVCRTTGRDDGKIMLTGDTFTVEHSHRKWGTLERDICVVDNGNSNNGGYWVSESFEDICECISRGVT
Ga0207905_10321504	3300025048	Marine	MTHKIIELSRVCRTTGRDDGKIMLTGDTFTVEHSHRKWGTLERDICIVDNGISNNGGYWVSESYEDICSLITGYYGHKGHI
Ga0207896_100203612	3300025071	Marine	MTHKIIELSRICKNSGRNEGKILLTGNTFAVTSEHRRWGKFERDICVVDNGISNNGGYWVSESYEDICSLITGYYGHKGHI
Ga0208157_10331095	3300025086	Marine	MIILELTRVCKNSGREEEKIFLTGNTFAVTKEHRRWGKFERDICVVDNGTSNNGGYWVSNSYDDVCDMIAIEAEKFHTSGDTR
Ga0208159_100529610	3300025101	Marine	MIILELTRVCRTTGLDDGKIFLTGNTFCASSETRKWGALERDICIVDNGTHNNGGYWVAESYEDICELISGGRVRRCG
Ga0208159_10735183	3300025101	Marine	MIILELTRVCKNSGREEEKIFLTGNTFAVTKEHRRWGKFERDICVVDNGTSNNGGYWVSNSYDDVCDMIAIEAEKFHTNGDTR
Ga0209535_10028203	3300025120	Marine	MIILELTRVCKNSGREEEKIFLTGNTFAVTKEHRRWGKFERDICVVDNGTSNNGGYWVADSYERICESIKYQDLHSN
Ga0209535_10074463	3300025120	Marine	MHIAIELSRVCRTTGRDDGKIMLTGDTFTVEHSHRKWGTLERDICVVDNGNSNNGGYWVSESFEDICECISRGVT
Ga0209535_10376066	3300025120	Marine	MYIAIELSRVCRTTGRDDGKIMLTGDTFTVAHSHRKWGTLERDICVVDNGISNNGGYWVSESYEDICYVISKDRVRTC
Ga0209535_11640913	3300025120	Marine	MIMLELNRVCRTTGRDNGKLLLTGDTFTVQCDHRRWGKLERDICVVDNGTGNNGGYWVSDSYGNIVSLIEEQSDERDKINGQGHPHS
Ga0209535_11721542	3300025120	Marine	MIMLELSRICKNSGRDEGKILLTGTTFAVTSEHRRWGKFERDICVVDNGTSNNGGYWVSDSYDDVCDMIAIEAEKFHTSGDTR
Ga0209336_100114126	3300025137	Marine	MYRAIELSRVCRTTGRDDGKIMLTGDTFTVEHSHRKWGTLERDICIVDNGISNNGGYWVSESYEDICYVISNDRVRTC
Ga0209337_10526011	3300025168	Marine	RICKNSGRNEGKILLTGNTFAVTSEHRRWGKFERDICVVDNGTSNNGGYWVSDSYEEICNMIKN
Ga0208814_10134705	3300025276	Deep Ocean	MIMLELNRVCRTTGRDNGKIILTGNTFSVYTETRRWGTTELDICVVDNGTSNNAGYWVSDSYNDIENMMIRDRS
Ga0209532_10119845	3300025696	Pelagic Marine	MIILELNRVCKSSGRDEGKIFLTGNTFAVTSEYHRWGKFERDICVVDNGNSNNGGYWVSDSYGSIVSVIEEQTGQC
Ga0209404_100513407	3300027906	Marine	MIILELTRVCSSSGREDGKVLLTGDTFCVSQSSHRWGTFERDICIVDNGTHNNGGYWVSDSYERICESIKYQDLHST
Ga0185543_10125248	3300029318	Marine	MIMLELTRVCRTSGRDDGKVFLTGDTFCVSESSHRWGTFERDICIVDNGTHNNGGYWVAESYGNIVSVIEEQTGRCA
Ga0183755_10502033	3300029448	Marine	MIMLELSRICKNSGRNEGKILLTGTTFAVTSEHRRWGKFERDICVVNNGTSNNGGYWVAESYNEIELMMVRDRS
Ga0315315_103097963	3300032073	Seawater	MLTLELNRVCRSTGRDNGKIFLTGNTFCVHTETRRWGKTELDICIVDNGTHNNGGYWVSDSYERICESIKYQDLHSN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086304

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences