Metagenome / Metatranscriptome Family F086309

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086309
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	57 residues
Representative Sequence	VNIKEAKSLAFGSKPSTDLDEYYSAWQWLYDNHVYLNVADAGYMDKLICDGHITIDK
Number of Associated Samples	60
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	50.45 %
% of genes near scaffold ends (potentially truncated)	13.51 %
% of genes from short scaffolds (< 2000 bps)	83.78 %
Associated GOLD sequencing projects	52
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.78

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (64.865 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (43.243 % of family members)
Environment Ontology (ENVO)	Unclassified (74.775 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (99.099 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.00% β-sheet: 0.00% Coil/Unstructured: 60.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.78
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.78
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SCOP family	SCOP domain	Representative PDB	TM-score
a.118.1.1: Armadillo repeat	d1wa5c_	1wa5	0.57824
a.118.1.16: PBS lyase HEAT-like repeat	d1oyza_	1oyz	0.57685
e.68.1.1: YacF-like	d2oeza1	2oez	0.56585
a.100.1.5: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase	d1bg6a1	1bg6	0.56179
c.1.8.1: Amylase, catalytic domain	d1bf2a3	1bf2	0.55984

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF01844	HNH	6.31
PF14279	HNH_5	4.50
PF01551	Peptidase_M23	3.60
PF00476	DNA_pol_A	3.60
PF00589	Phage_integrase	2.70
PF11753	DUF3310	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	Replication, recombination and repair [L]	3.60

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.86 %
All Organisms	root	All Organisms	35.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.86 %
cellular organisms	root	All Organisms → cellular organisms	26.13 %
Viruses	superkingdom	All Organisms → Viruses	9.01 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.86 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	26.13 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.31 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.86 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	16.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.31 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.41 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	1.80 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.90 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.86 %
bacterium TMED88	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	16.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.31 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.41 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	1.80 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.90 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.86 %
bacterium TMED88	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	16.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.31 %
Rickettsiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales	5.41 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1.80 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.90 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.86 %
bacterium TMED88	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	16.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.31 %
unclassified Rickettsiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales	5.41 %
Pirellulales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales	0.90 %
Kyanoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	0.90 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.90 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.86 %
bacterium TMED88	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	16.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.31 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	5.41 %
Pirellulaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae	0.90 %
Nilusvirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Nilusvirus	0.90 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.90 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.86 %
bacterium TMED88	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	16.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.31 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	5.41 %
Cryomorphaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Cryomorphaceae	0.90 %
Blastopirellula	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Blastopirellula	0.90 %
Nilusvirus ssm2	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Nilusvirus → Nilusvirus ssm2	0.90 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.86 %
bacterium TMED88	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	16.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.31 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	5.41 %
unclassified Blastopirellula	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Blastopirellula → unclassified Blastopirellula	0.90 %
unclassified Cryomorphaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Cryomorphaceae → unclassified Cryomorphaceae	0.90 %
Nilusvirus ssm2	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Nilusvirus → Nilusvirus ssm2	0.90 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.86 %
bacterium TMED88	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	16.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.31 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	5.41 %
Blastopirellula sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Blastopirellula → unclassified Blastopirellula → Blastopirellula sp.	0.90 %
Cryomorphaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Cryomorphaceae → unclassified Cryomorphaceae → Cryomorphaceae bacterium	0.90 %
Nilusvirus ssm2	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Nilusvirus → Nilusvirus ssm2	0.90 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001450\|JGI24006J15134_10000657	All Organisms → cellular organisms → Bacteria	21019	Open in IMG/M
3300001834\|ACM2_1018856	Not Available	533	Open in IMG/M
3300001946\|GOS2244_1030723	Not Available	1038	Open in IMG/M
3300001967\|GOS2242_1069420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1801	Open in IMG/M
3300002231\|KVRMV2_101235479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1553	Open in IMG/M
3300005837\|Ga0078893_10004434	Not Available	1152	Open in IMG/M
3300005837\|Ga0078893_10705281	Not Available	1136	Open in IMG/M
3300005837\|Ga0078893_10705282	Not Available	970	Open in IMG/M
3300006617\|Ga0101443_118886	Not Available	5646	Open in IMG/M
3300006734\|Ga0098073_1002237	Not Available	4917	Open in IMG/M
3300006734\|Ga0098073_1005089	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	2694	Open in IMG/M
3300006734\|Ga0098073_1010935	Not Available	1536	Open in IMG/M
3300006734\|Ga0098073_1012095	All Organisms → Viruses → Predicted Viral	1426	Open in IMG/M
3300006734\|Ga0098073_1013933	All Organisms → Viruses → Predicted Viral	1293	Open in IMG/M
3300006734\|Ga0098073_1014261	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	1272	Open in IMG/M
3300006734\|Ga0098073_1021063	Not Available	975	Open in IMG/M
3300006734\|Ga0098073_1024671	Not Available	877	Open in IMG/M
3300006734\|Ga0098073_1041441	Not Available	628	Open in IMG/M
3300006752\|Ga0098048_1019913	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	2259	Open in IMG/M
3300006752\|Ga0098048_1032820	All Organisms → Viruses → Predicted Viral	1686	Open in IMG/M
3300006752\|Ga0098048_1058716	Not Available	1198	Open in IMG/M
3300006752\|Ga0098048_1249547	Not Available	519	Open in IMG/M
3300006790\|Ga0098074_1008225	All Organisms → cellular organisms → Bacteria	3584	Open in IMG/M
3300006790\|Ga0098074_1009217	All Organisms → Viruses	3330	Open in IMG/M
3300006790\|Ga0098074_1026105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1729	Open in IMG/M
3300006790\|Ga0098074_1029525	Not Available	1604	Open in IMG/M
3300006790\|Ga0098074_1060661	Not Available	1043	Open in IMG/M
3300006790\|Ga0098074_1071079	Not Available	949	Open in IMG/M
3300006790\|Ga0098074_1101745	Not Available	760	Open in IMG/M
3300006790\|Ga0098074_1115598	Not Available	703	Open in IMG/M
3300006916\|Ga0070750_10062363	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	1783	Open in IMG/M
3300006916\|Ga0070750_10185210	Not Available	928	Open in IMG/M
3300006916\|Ga0070750_10383999	Not Available	588	Open in IMG/M
3300006919\|Ga0070746_10022868	Not Available	3420	Open in IMG/M
3300006919\|Ga0070746_10054187	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	2083	Open in IMG/M
3300006919\|Ga0070746_10076493	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	1698	Open in IMG/M
3300006921\|Ga0098060_1066695	Not Available	1044	Open in IMG/M
3300006922\|Ga0098045_1062062	Not Available	911	Open in IMG/M
3300006925\|Ga0098050_1136735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	619	Open in IMG/M
3300007274\|Ga0101446_106508	All Organisms → cellular organisms → Bacteria	6529	Open in IMG/M
3300009214\|Ga0103830_1016775	Not Available	647	Open in IMG/M
3300009216\|Ga0103842_1014111	Not Available	743	Open in IMG/M
3300009346\|Ga0103839_1010208	Not Available	576	Open in IMG/M
3300009550\|Ga0115013_11327759	Not Available	531	Open in IMG/M
3300009593\|Ga0115011_10148127	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	1700	Open in IMG/M
3300009593\|Ga0115011_10535362	Not Available	935	Open in IMG/M
3300009593\|Ga0115011_12003826	Not Available	528	Open in IMG/M
3300009593\|Ga0115011_12123625	Not Available	516	Open in IMG/M
3300010148\|Ga0098043_1057703	Not Available	1177	Open in IMG/M
3300010150\|Ga0098056_1028209	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	1975	Open in IMG/M
3300012920\|Ga0160423_10126739	Not Available	1799	Open in IMG/M
3300012920\|Ga0160423_10425557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	906	Open in IMG/M
3300012920\|Ga0160423_10519200	Not Available	809	Open in IMG/M
3300012920\|Ga0160423_10522092	Not Available	807	Open in IMG/M
3300012920\|Ga0160423_10530049	Not Available	800	Open in IMG/M
3300012920\|Ga0160423_10742596	Not Available	661	Open in IMG/M
3300012928\|Ga0163110_11386263	Not Available	568	Open in IMG/M
3300012936\|Ga0163109_10274174	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Cryomorphaceae → unclassified Cryomorphaceae → Cryomorphaceae bacterium	1236	Open in IMG/M
3300013722\|Ga0116824_101429	Not Available	792	Open in IMG/M
3300017708\|Ga0181369_1042618	Not Available	1036	Open in IMG/M
3300017708\|Ga0181369_1118673	Not Available	538	Open in IMG/M
3300017727\|Ga0181401_1036102	All Organisms → Viruses → Predicted Viral	1400	Open in IMG/M
3300017757\|Ga0181420_1025762	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Blastopirellula → unclassified Blastopirellula → Blastopirellula sp.	1942	Open in IMG/M
3300017757\|Ga0181420_1162590	Not Available	662	Open in IMG/M
3300017762\|Ga0181422_1004327	Not Available	4781	Open in IMG/M
3300017762\|Ga0181422_1082947	All Organisms → Viruses → Predicted Viral	1010	Open in IMG/M
3300017770\|Ga0187217_1259644	Not Available	565	Open in IMG/M
3300017771\|Ga0181425_1226193	Not Available	582	Open in IMG/M
3300017781\|Ga0181423_1323220	Not Available	565	Open in IMG/M
3300017985\|Ga0181576_10538067	Not Available	713	Open in IMG/M
3300020258\|Ga0211529_1061997	Not Available	637	Open in IMG/M
3300020378\|Ga0211527_10123056	Not Available	749	Open in IMG/M
3300020387\|Ga0211590_10033206	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	1520	Open in IMG/M
3300020414\|Ga0211523_10016233	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	3354	Open in IMG/M
3300020417\|Ga0211528_10049394	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	1845	Open in IMG/M
3300020417\|Ga0211528_10049867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1834	Open in IMG/M
3300020430\|Ga0211622_10408202	Not Available	582	Open in IMG/M
3300020438\|Ga0211576_10431965	Not Available	671	Open in IMG/M
3300020451\|Ga0211473_10125592	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	1317	Open in IMG/M
3300020451\|Ga0211473_10212798	Not Available	995	Open in IMG/M
3300020453\|Ga0211550_10183701	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	983	Open in IMG/M
3300020453\|Ga0211550_10440493	Not Available	612	Open in IMG/M
3300020456\|Ga0211551_10475177	Not Available	596	Open in IMG/M
3300020462\|Ga0211546_10246881	Not Available	889	Open in IMG/M
3300020462\|Ga0211546_10330041	Not Available	764	Open in IMG/M
3300020462\|Ga0211546_10662973	Not Available	524	Open in IMG/M
3300020474\|Ga0211547_10107862	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Nilusvirus → Nilusvirus ssm2	1458	Open in IMG/M
3300021356\|Ga0213858_10295671	Not Available	774	Open in IMG/M
3300021364\|Ga0213859_10433561	Not Available	578	Open in IMG/M
3300021364\|Ga0213859_10444085	Not Available	569	Open in IMG/M
3300021364\|Ga0213859_10446344	Not Available	568	Open in IMG/M
3300021373\|Ga0213865_10448084	Not Available	562	Open in IMG/M
3300021425\|Ga0213866_10051280	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	2339	Open in IMG/M
3300022074\|Ga0224906_1012895	Not Available	3175	Open in IMG/M
3300022074\|Ga0224906_1022207	Not Available	2260	Open in IMG/M
3300022074\|Ga0224906_1029467	All Organisms → Viruses → Predicted Viral	1889	Open in IMG/M
3300025057\|Ga0208018_103824	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	2595	Open in IMG/M
3300025057\|Ga0208018_113446	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	1079	Open in IMG/M
3300025057\|Ga0208018_122310	Not Available	731	Open in IMG/M
3300025057\|Ga0208018_127457	Not Available	620	Open in IMG/M
3300025057\|Ga0208018_132133	Not Available	546	Open in IMG/M
3300025083\|Ga0208791_1023753	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	1214	Open in IMG/M
3300025093\|Ga0208794_1007258	All Organisms → Viruses → Predicted Viral	3029	Open in IMG/M
3300025093\|Ga0208794_1013403	Not Available	1896	Open in IMG/M
3300025093\|Ga0208794_1069544	Not Available	618	Open in IMG/M
3300025099\|Ga0208669_1094585	Not Available	628	Open in IMG/M
3300025168\|Ga0209337_1033424	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	2823	Open in IMG/M
3300025674\|Ga0208162_1160068	Not Available	608	Open in IMG/M
3300025759\|Ga0208899_1189886	Not Available	662	Open in IMG/M
3300027906\|Ga0209404_10280845	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	1057	Open in IMG/M
3300027906\|Ga0209404_10469036	Not Available	829	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	97.30%
Freshwater	Environmental → Aquatic → Freshwater	2.70%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	51.35%
Coastal	Environmental → Aquatic → Marine → Coastal	17.12%
Unclassified	Environmental → Aquatic → Marine → Unclassified	15.32%
Strait	Environmental → Aquatic → Marine → Strait	9.91%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	2.70%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.70%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	44.14%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	17.12%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	15.32%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	9.91%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	7.21%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	2.70%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.80%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.90%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	0.90%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	43.24%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	15.32%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	9.91%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	7.21%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	7.21%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	5.41%
Marine Surface Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water	4.50%
River Water	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water	2.70%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	1.80%
Marine Plankton	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Plankton	0.90%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.90%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300001834	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM2, ROCA_DNA019_0.2um_2g	Environmental	Open in IMG/M
3300001946	Marine microbial communities from North James Bay, Santigo Island, Equador	Environmental	Open in IMG/M
3300001967	Marine microbial communities from Devil's Crown, Floreana Island, Equador - GS027	Environmental	Open in IMG/M
3300002231	Marine sediment microbial communities from Santorini caldera mats, Greece - red mat	Environmental	Open in IMG/M
3300005837	Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18	Environmental	Open in IMG/M
3300006617	Marine coastal surface water microbial communities in Port Hacking, Sydney, Australia ? TJ09 time point	Environmental	Open in IMG/M
3300006734	Marine viral communities from the Gulf of Mexico - 31_GoM_OMZ_CsCl metaG	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006790	Marine viral communities from the Gulf of Mexico - 32_GoM_OMZ_CsCl metaG	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M
3300006921	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG	Environmental	Open in IMG/M
3300006922	Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG	Environmental	Open in IMG/M
3300006925	Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG	Environmental	Open in IMG/M
3300007274	Marine coastal surface water microbial communities in Port Hacking, Sydney, Australia ? TJ13 time point	Environmental	Open in IMG/M
3300009214	Microbial communities of water from the North Atlantic ocean - ACM51	Environmental	Open in IMG/M
3300009216	Microbial communities of water from the North Atlantic ocean - ACM47	Environmental	Open in IMG/M
3300009346	Microbial communities of water from the North Atlantic ocean - ACM14	Environmental	Open in IMG/M
3300009550	Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome	Environmental	Open in IMG/M
3300009593	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome	Environmental	Open in IMG/M
3300010148	Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaG	Environmental	Open in IMG/M
3300010150	Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300012928	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaG	Environmental	Open in IMG/M
3300012936	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaG	Environmental	Open in IMG/M
3300013722	Marine hypoxic microbial communities from the Gulf of Mexico, USA - 2m_Station4_GOM_Metagenome	Environmental	Open in IMG/M
3300017708	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaG	Environmental	Open in IMG/M
3300017727	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20	Environmental	Open in IMG/M
3300017757	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22	Environmental	Open in IMG/M
3300017762	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 45 SPOT_SRF_2013-07-18	Environmental	Open in IMG/M
3300017770	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 (version 2)	Environmental	Open in IMG/M
3300017771	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 48 SPOT_SRF_2013-11-13	Environmental	Open in IMG/M
3300017781	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14	Environmental	Open in IMG/M
3300017985	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020258	Marine microbial communities from Tara Oceans - TARA_B100000073 (ERX556061-ERR598949)	Environmental	Open in IMG/M
3300020378	Marine microbial communities from Tara Oceans - TARA_B100000066 (ERX556006-ERR599102)	Environmental	Open in IMG/M
3300020387	Marine microbial communities from Tara Oceans - TARA_B100000405 (ERX556119-ERR599023)	Environmental	Open in IMG/M
3300020414	Marine microbial communities from Tara Oceans - TARA_B100000035 (ERX556019-ERR599028)	Environmental	Open in IMG/M
3300020417	Marine microbial communities from Tara Oceans - TARA_B100000073 (ERX556034-ERR599082)	Environmental	Open in IMG/M
3300020430	Marine microbial communities from Tara Oceans - TARA_B100000683 (ERX556126-ERR599160)	Environmental	Open in IMG/M
3300020438	Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)	Environmental	Open in IMG/M
3300020451	Marine microbial communities from Tara Oceans - TARA_B100001778 (ERX555927-ERR598996)	Environmental	Open in IMG/M
3300020453	Marine microbial communities from Tara Oceans - TARA_B100001758 (ERX556003-ERR598963)	Environmental	Open in IMG/M
3300020456	Marine microbial communities from Tara Oceans - TARA_B100001741 (ERX555984-ERR599123)	Environmental	Open in IMG/M
3300020462	Marine microbial communities from Tara Oceans - TARA_B100001559 (ERX556040-ERR598986)	Environmental	Open in IMG/M
3300020474	Marine prokaryotic communities collected during Tara Oceans survey from station TARA_151 - TARA_B100001564 (ERX555957-ERR598976)	Environmental	Open in IMG/M
3300021356	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245	Environmental	Open in IMG/M
3300021364	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO304	Environmental	Open in IMG/M
3300021373	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282	Environmental	Open in IMG/M
3300021425	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284	Environmental	Open in IMG/M
3300022074	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)	Environmental	Open in IMG/M
3300025057	Marine viral communities from the Gulf of Mexico - 31_GoM_OMZ_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025083	Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG (SPAdes)	Environmental	Open in IMG/M
3300025093	Marine viral communities from the Gulf of Mexico - 32_GoM_OMZ_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025099	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG (SPAdes)	Environmental	Open in IMG/M
3300025168	Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)	Environmental	Open in IMG/M
3300025674	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025759	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)	Environmental	Open in IMG/M
3300027906	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24006J15134_1000065728	3300001450	Marine	MNTKQAKSLAFGSKAPDSLEEYYSAWQWLYDNDVDISTADSDFLDKLICDGCVKAKEGYFD*
ACM2_10188562	3300001834	Marine Plankton	VNVKQAKSIAFGSDTSGTLEDYYAAWQWLYDHKIELNEPDENYMDKLICDGHITIDK*
GOS2244_10307232	3300001946	Marine	VNIKEAKSVAFGSKPAATLQSYYDAWQWLYDHKVELEEPDLNYIDKLICDGMITIDK*
GOS2242_10694206	3300001967	Marine	VNIKEAKAVAFGSRPATTLQAYYDAWQWLYDNKVELQEPDLNYIDKLICDGIITIDK*
KVRMV2_1012354794	3300002231	Marine Sediment	VNIREAKSIAFGSKPSKDLAEYYDAWQWLYDNRVALTQADANYMDKLICDGNITIDK*
Ga0078893_100044343	3300005837	Marine Surface Water	VNIKEAKSIAFGSKPAAHLLEFYSAWQWLYDNKVGLSEPDADYLDKLIDDGIITIDK*
Ga0078893_107052812	3300005837	Marine Surface Water	VNIKEAKSIAFGSKPAAHLLEFYSAWQWLHDNKVGLSESDASYLDKLIDDGIIRIDK*
Ga0078893_107052823	3300005837	Marine Surface Water	VNTKEAKSIAFGSKPAAHLLEFYSAWQWLYDNKTELSESDADYLDKLICDGIIRIDK*
Ga0101443_1188866	3300006617	Marine Surface Water	EAKSIAFGSKPAAHLLEFYSAWQWLHDNKVGLSESDASYLDKLIDDGIIRIDK*
Ga0098073_10022377	3300006734	Marine	VNVKEAKALAFGSKPSVDLAQYYDAWQWLYDNNVALTQADAHYMDKLICDGHITIDK*
Ga0098073_10050893	3300006734	Marine	VNIKEAKCIAFGSKPADTLEAYYTAWQWLYDNKVELEEADANYLDKLICDGYITIDE*
Ga0098073_10109352	3300006734	Marine	VNVKEAKAIAFGSKPSVDLDEYYSAWQWLYDNSVYLNVADAGYMEKLICDGHITIDK*
Ga0098073_10120952	3300006734	Marine	VNIKQAKSIAFGSKPATDLQQYYSAWQWLHDNNVELTKADADFLDKLICDGQITIDK*
Ga0098073_10139334	3300006734	Marine	VNVKEAKRLAFGSDPSTTLDQFYDAWQWLYDNETEMSESDYNYLDKLICDGIVKPREGYSYNG*
Ga0098073_10142614	3300006734	Marine	VNIKDAKAIAFGSRPSVDLEEYYNAWQWLYDNSVYLNVADAGYMDKLICDGHITI
Ga0098073_10210632	3300006734	Marine	VNIKEAKAIAFGSKPSADLDEYYSAWQWLYDNTVYLNAADAGYMEKLICDGHITIDK*
Ga0098073_10246713	3300006734	Marine	VNVKEAKRIAFGSDPSYDLKQFYSAWQWLHDNETELTDPDLCYMDKLICDGIVKARKGYSYNR*
Ga0098073_10414411	3300006734	Marine	MNIKEAKALAFGSRPSADLEEYYSAWQWLYDRSVELEQPDIEYMNKLICDGHITIDK*
Ga0098048_10199134	3300006752	Marine	VNVKEAKSIAFGSKPAEHLLEFYSAWQWLYDNKTELSEPDADYLDKLICDGIIRIDK*
Ga0098048_10328202	3300006752	Marine	VNVKEAKALAFGSKPSIDLAQYYNAWQWLYDNKIFLNVADAGYMDKLICDGHITIDK*
Ga0098048_10587164	3300006752	Marine	VNIKEAKAIAFGSRPSKDLDEYYGAWQWLYDSKVYLNEADAGYMDKLICDGHITIETNA*
Ga0098048_12495471	3300006752	Marine	VNIKEAKAIAFGSKPSKDLDEYYGAWQWLYDNHVYLNVADASYMDKLICDGNITIETNA*
Ga0098074_10082255	3300006790	Marine	VNIKEAKAIAFGSKPSADLNEYYSAWQWLYDKKVYLNVADAGYMDKLICDGHITIDK*
Ga0098074_10092173	3300006790	Marine	VNIKSAKQIAFGTTAAETLEEYYSAWQWLYDNKVELKEPDENYIDKLICDGHITIDK*
Ga0098074_10261053	3300006790	Marine	VNVKEAKSIAFGSRPSVDLDEYYAAWQWLYNNSIELEIPDVEYMDKLICDGHITIDK*
Ga0098074_10295254	3300006790	Marine	MNIKDAKAIAFGSRPSTDLDEYYNAWQWLYDNHVYLNVADAGYMDKLICDGHITIDK*
Ga0098074_10606612	3300006790	Marine	MNIKEAKALAFGSKPSTDLDQYYGAWQWLYDEKIYLNEADANYMDKLICDGHITIGK*
Ga0098074_10710793	3300006790	Marine	VNIKQAKSIAFGSKPATDLQQYYSAWQWLYDNDVELTQADADFLDKLICDGQITIDK*
Ga0098074_11017453	3300006790	Marine	MDIKRAKSLAFGSTPSADLDEYYGAWQYLYDRSVQLEVPDIEYMDKLICDGHIRIDK*
Ga0098074_11155983	3300006790	Marine	VNIKDAKAIAFGSRPSVDLEEYYNAWQWLYDNSVYLNVADAGYMDKLICDGHITIDK*
Ga0070750_100623632	3300006916	Aqueous	VNIKQAKSLAFGSKPSASLDEFYNAWQWLYDNQVDLKGSDLGYLDKLICDGIIVARDDYTYNE*
Ga0070750_101852103	3300006916	Aqueous	VNVKEAKALAFGSKPSVDLAQYYNAWQWLYDNKVFLSMPDANYMEKLICDGHITIDK*
Ga0070750_103839993	3300006916	Aqueous	IKSAKQIAFGTTAAETLEEYYSAWQWLYDNKVELKEPDENYIDKLICDGHITIDK*
Ga0070746_100228686	3300006919	Aqueous	MDVKQAKSLAFGSKPSVTLDEYYAAWQYLYDKSVELEMPDVEYMDKLICDGHIRIDK*
Ga0070746_100541874	3300006919	Aqueous	VNIKQAKSLAFGSKPSASLDEFYNAWQWLYDNQVDLKGPDLGYLDKLICDGIIVARDDYTYNE*
Ga0070746_100764932	3300006919	Aqueous	MDVKRAKSLAFGSTPSADLDEYYGAWQYLYDRSVQLEVPDIEYMDKLICDGHIRIDK*
Ga0098060_10666953	3300006921	Marine	VTIKEAKALAFGSKPSADLQEYYGAWQWLYDNHVYLNVADAGYMDKLICDGHITIDK*
Ga0098045_10620622	3300006922	Marine	VNIKEAKSIAFGSKPAEHLLEFYSAWQWLYDNKTELSEPDAEYLDKLICDGIIRIDK*
Ga0098050_11367353	3300006925	Marine	VNIKEAKAIAFGSRPSKDLDEYYGAWQWLYDSKVYLNEADAGYMDKLICDG
Ga0101446_1065082	3300007274	Marine Surface Water	VNIKQAKSIAFGSKPATDLQQYYSAWQWLHDNDVELTQADADFLDKLICDGQITIDK*
Ga0103830_10167752	3300009214	River Water	MDVKQAKSLAFGSKPSSSLDEYYSAWQWLYDQNIALTQADAHYMDKLICDGIITIEK*
Ga0103842_10141112	3300009216	River Water	MNVKQAKAMAFGSDPSGTLDDYYQAWQWLYDHKVELSEADENYMDKLICDGHITIVK*
Ga0103839_10102081	3300009346	River Water	MNVKQAKAMAFGSDPSGTLDDYYQAWQWLYDHKVELSEADENYMDKLIC
Ga0115013_113277591	3300009550	Marine	VNTKEAKSIAFGSKPAPTLQSYYDAWQWLYDHKVELEEPDLNYIDKLICDGM
Ga0115011_101481273	3300009593	Marine	VNIREAKALAFGSKPSTDLDEYYSAWQWLFDNHVYLNVADAGYMDKLICDGHITIDK*
Ga0115011_105353623	3300009593	Marine	VNIKEAKALAFGSKPSADLAEYYGAWQWLYDNHVYLNVADAGYMDKLICDGHITIETNA*
Ga0115011_120038262	3300009593	Marine	MNIKDAKSIAFGSRESATLDEFYDAWQWLYDNHVALSEPDENYMDKLICDGNVIPRSES*
Ga0115011_121236252	3300009593	Marine	VNIKEAKSIAFGSKPAAHLLEFYSAWQWLYDNKVGLSEADACYLDKLIDDGIIRIDT*
Ga0098043_10577033	3300010148	Marine	VNTKEAKSIAFGSKPAPTLQSYYDAWQWLYDHEVELQEPDLNYIDKLICDGMITIDK*
Ga0098056_10282097	3300010150	Marine	VNIKEAKAIAFGSRPSKDLDEYYGAWQWLYDSKVYLNEADAGYMDKLICDGHITIDK
Ga0160423_101267393	3300012920	Surface Seawater	VNVKEAKSIAFGSKQAPTLQSYYDAWQWLYDHKVELEEPDRNYIDKLICDGMITIDK*
Ga0160423_104255571	3300012920	Surface Seawater	VNVKEAKQVAFGSRPAVTLEAYYDAWQWLYDHKVELEEPDNNYMDKLICDGYITIDK*
Ga0160423_105192003	3300012920	Surface Seawater	VNIKEAKAVAFGSRPAATLQSYYDAWQWLYDNKVDLQEPDLNYIDKLICDGIITIDK*
Ga0160423_105220922	3300012920	Surface Seawater	VNVKEAKAVAFGSRPAETLQSYYVAWQWLYDHKVELEEPDLNYIDKLICDGMITIDK*
Ga0160423_105300491	3300012920	Surface Seawater	VNVKEAKQVAFGSRPAITLEAYYDAWQWLYDHKVDLEEPDKNYMDKLICDGYITIDK*
Ga0160423_107425963	3300012920	Surface Seawater	IAFGSRPAETLQSYYDAWQWLYDNKVELQEPDLNYIDKLICDGMITIDK*
Ga0163110_113862633	3300012928	Surface Seawater	VNIKEAKSIAFGSKPAKTLQSYYDAWQWLYDNKVELQEPDLNYIDKLICDGM
Ga0163109_102741743	3300012936	Surface Seawater	VNIKEAKAVAFGSRPATTLQAYYDAWQWLYDNKLELQEPDLNYIDKLICDGIITIDK*
Ga0116824_1014292	3300013722	Marine	MNIKEAKSLAFGSSPSTTLEQYYDAWQWLYDNKIELQESDENYMDKLICDGHITIDK*
Ga0181369_10426183	3300017708	Marine	VNIKEAKALAFGSKPSADLQEYYGAWQWLYDNHVYLNVSDADYMDKLICDGHITIDK
Ga0181369_11186732	3300017708	Marine	VNVKEAKSIAFGSKQAPTLQSYYDAWQWLYDNKVELQEPDLNYIDKLICDGIITIDK
Ga0181401_10361023	3300017727	Seawater	VNVKEAKAIAFGSKPSPTLQSYYDAWQWLYDNQVELEEPDRNYVDKLVCDGMITIDK
Ga0181420_10257625	3300017757	Seawater	MNTKQAKSLAFGSRAPDSLEEYYSAWQWLYDNDVELSTADSDFLDKLICDGCVKAKEGYF
Ga0181420_11625901	3300017757	Seawater	NVKEAKAIAFGSKPSPTLQSYYDAWQWLYDNQVELEEPDMNYIDKLVCDGMITIDK
Ga0181422_10043278	3300017762	Seawater	VNIKDAKAIAFGSRPSSDLEEYYSAWQWLYDNGVHLNAADAGYMDKLLCDGHITIDK
Ga0181422_10829472	3300017762	Seawater	VNIKEAKSLAFGSKPSADLAEYYGAWQWLYDHDVELGECDADYMDKLICDGRITIDK
Ga0187217_12596441	3300017770	Seawater	VNVKEAKAIAFGSKPSPTLQSYYDAWQWLYDNQVELEEPDMNYIDKLVCDGMITIDK
Ga0181425_12261932	3300017771	Seawater	VNIKEAKALAFGSKPSADLQEYYGAWQWLYNNHVYLNEADAGYMDKLICDGHITIDK
Ga0181423_13232203	3300017781	Seawater	VNIKEAKSLAFGSKPSADLAEYYGAWQWLYDHNVELGECDVDYMDKLICDGRITIDK
Ga0181576_105380672	3300017985	Salt Marsh	VNVKEAKSIAFGSRPSVDLDEYYAAWQWLYNNSIELEIPDVEYMDKLICDGHITIDK
Ga0211529_10619971	3300020258	Marine	IKDAKAIAFGSRESASLTEYYDAWQWLYDNAVPLREPDINYLDKLICDGIIKPKDGYF
Ga0211527_101230563	3300020378	Marine	SRESASLTEYYDAWQWLYDNAVPLREPDINYLDKLICDGIIKPKDGYF
Ga0211590_100332064	3300020387	Marine	MHIKDAKAIAFGSRESASLTEYYDAWQWLYDNAIPLREPDINYLDKLICDGIIKPKDGYF
Ga0211523_100162334	3300020414	Marine	MHIKDAKAIAFGSRESASLTEYYDAWQWLYDNAVPLREPDINYLDKLICDGIIKPKDGYF
Ga0211528_100493941	3300020417	Marine	MHIKDAKAIAFGSRESASLTEYYDAWQWLYDNAVPLREPDINYLDKLICDG
Ga0211528_100498674	3300020417	Marine	VNVKEAKLVAFGSRPAATLEAYYDAWQWLYDHKIELEEPDNNYMDKLICDGYITIDK
Ga0211622_104082022	3300020430	Marine	MNIKEAKALAFGSKPSTDLDEYYSAWQWLYDNGVYLNVADAGYMDKLICDGHITIDK
Ga0211576_104319653	3300020438	Marine	VNVKEAKAIAFGSKPAPTLQSYYDAWQWLYSNRVELEEPDMNYIDKLVCDGMITIDK
Ga0211473_101255924	3300020451	Marine	VNIREAKSIAFGSKPPETLQAYYDAWQWLYDNHVALSEPDENYMDKLVCDGHITIDK
Ga0211473_102127982	3300020451	Marine	VNIREAKSIAFGSKPSKDLAEYYDAWQWLYDNRVALTQADANYMDKLICDGNITIDK
Ga0211550_101837013	3300020453	Marine	VNIREAKSIAFGSKPPETLQAYYDAWQWLYDNHVALSEPDENYMDKLVCDGHITID
Ga0211550_104404933	3300020453	Marine	VNIKEAKSLAFGSKPSDSLDEYYSAWQWLYDNHVYLNVADAGYMDKLICDGHITIDK
Ga0211551_104751771	3300020456	Marine	VNIKEAKSIAFGSKPAAHLLEFYSAWQWLYDNKVGLSESDAAYLDKLICDVIIRIDK
Ga0211546_102468812	3300020462	Marine	VNIREAKSIAFGSKPPKTLQAYYDAWQWLYDNHVALSEPDENYMDKLVCDGHITIDK
Ga0211546_103300412	3300020462	Marine	VNIKEAKSIAFGSKPAAHLLEFYSAWQWLYDNKVGLSESDAAYLDKLICDGIIRIDK
Ga0211546_106629732	3300020462	Marine	VNIKEAKSLAFGSKPSTDLDEYYSAWQWLYDNHVYLNVADAGYMDKLICDGHITIDK
Ga0211547_101078623	3300020474	Marine	VNIKEAKAIAFGSKPSDDLDQYYGAWQWLYDNHVYLNESDANYMDKLVCDGHITMDK
Ga0213858_102956712	3300021356	Seawater	VNVKEAKAIAFGSRPSIDLNEYYDAWQWLYDNNVYLNVADAGYMEKLICDGHITIDK
Ga0213859_104335611	3300021364	Seawater	VNVKEAKAIAFGSRPSTDLNEYYDAWQWLYDNNVYLNAADAGYMDKLICDGHITIDK
Ga0213859_104440852	3300021364	Seawater	VNIKQAKSIAFGSKPATDLQQYYSAWQWLYDNEVELTQADADFLDKLICDGQITIEK
Ga0213859_104463442	3300021364	Seawater	VNTKEAKALAFGSKPSVDLDEYYAAWQWLYDEKIYMSEADANYMDKLICDGHITIETNA
Ga0213865_104480842	3300021373	Seawater	SSTEAEPASWIVNVKEAKSIAFGSKMCADLDEYYGAWQWLYDKGVELEQPDIEYMDKLICDGHITIDK
Ga0213866_100512803	3300021425	Seawater	VNIKQAKSIAFGSKPATDLQQYYSAWQWLHDNEVELTQADADFLDKLICDGQITIDK
Ga0224906_10128956	3300022074	Seawater	VNVKEAKSIAFGSKPAAHLLEFYSAWQWLYDNKTELSEPDADYLDKLICDGIIRIDK
Ga0224906_10222074	3300022074	Seawater	VTVKEAKSIAFGSRPATTLSEYYEAWQWLYDSKTELGEADMRYLDKLICDGLVK
Ga0224906_10294672	3300022074	Seawater	VNVKEAKSLAFGSKPSSSLDEYYKAWQWLYDNKIGLSEADAGYMDKLICDGRITIDK
Ga0208018_1038247	3300025057	Marine	VNVKEAKRLAFGSDPSTTLDQFYDAWQWLYDNETEMSESDYNYLDKLICDGIVKPREGYSYNG
Ga0208018_1134464	3300025057	Marine	VNIKEAKCIAFGSKPADTLEAYYTAWQWLYDNKVELEEADANYLDKLICDGYITIDE
Ga0208018_1223101	3300025057	Marine	MNIKEAKALAFGSRPSADLEEYYSAWQWLYDRSVELEQPDIEYMNKLICDGHITIDK
Ga0208018_1274572	3300025057	Marine	VNVKEAKALAFGSKPSVDLAQYYDAWQWLYDNNVALTQADAHYMDKLICDGHITIDK
Ga0208018_1321332	3300025057	Marine	VNVKEAKSIAFGSRPSVDLDEYYAAWQWLYDNSIELEIPDVEYMDKLICDGHITIDK
Ga0208791_10237533	3300025083	Marine	VNIKEAKAIAFGSRPSKDLDEYYGAWQWLYDSKVYLNEADAGYMDKLICDGHITIETNA
Ga0208794_10072587	3300025093	Marine	VNIKSAKQIAFGTTAAETLEEYYSAWQWLYDNKVELKEPDENYIDKLICDGHITIDK
Ga0208794_10134034	3300025093	Marine	MNIKDAKAIAFGSRPSTDLDEYYNAWQWLYDNHVYLNVADAGYMDKLICDGHITIDK
Ga0208794_10695442	3300025093	Marine	VNIKQAKSIAFGSKPATDLQQYYSAWQWLYDNDVELTQADTDFLDKLICDGQITIDK
Ga0208669_10945852	3300025099	Marine	VTIKEAKALAFGSKPSADLQEYYGAWQWLYDNHVYLNVADAGYMDKLICDGHITIDK
Ga0209337_10334244	3300025168	Marine	MNTKQAKSLAFGSKAPDSLEEYYSAWQWLYDNDVDISTADSDFLDKLICDGCVKAKEGYF
Ga0208162_11600681	3300025674	Aqueous	VNVKEAKSIAFGSRPSADLDEYYAAWQWLYNNSIELEMPDVEYMDKLICDGHITIDK
Ga0208899_11898863	3300025759	Aqueous	VNIKQAKSLAFGSKPSASLDEFYNAWQWLYDNQVDLKGSDLGYLDKLICDGIIVARDDYTYNE
Ga0209404_102808451	3300027906	Marine	VNIREAKALAFGSKPSTDLDEYYSAWQWLFDNHVYLNAADAGYMDKLICDGHITIEK
Ga0209404_104690363	3300027906	Marine	VNIKEAKALAFGSKPSVDLDEYYSAWQWLFDNHVYLNVADAGYMDKLICDGHITIDK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086309

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences