Metagenome Family F086345

Basic Information
Family ID	F086345
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	57 residues
Representative Sequence	YEATITDPTVFVKPVEMRFTLKRVPAEQQILEYSCLEGERSLQHYTDEDGGKKRRVK
Number of Associated Samples	94
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.90 %
% of genes near scaffold ends (potentially truncated)	99.10 %
% of genes from short scaffolds (< 2000 bps)	96.40 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere (10.811 % of family members)
Environment Ontology (ENVO)	Unclassified (59.459 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (67.568 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 28.07% Coil/Unstructured: 71.93%
Feature Viewer

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Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF07568	HisKA_2	0.90
PF00135	COesterase	0.90
PF01494	FAD_binding_3	0.90
PF13594	Obsolete Pfam Family	0.90
PF00308	Bac_DnaA	0.90
PF13360	PQQ_2	0.90
PF01979	Amidohydro_1	0.90
PF13378	MR_MLE_C	0.90
PF09335	SNARE_assoc	0.90
PF12695	Abhydrolase_5	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.80
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.90
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.90
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.90
COG0593	Chromosomal replication initiation ATPase DnaA	Replication, recombination and repair [L]	0.90
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.90
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.90
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.90
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.90
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	0.90
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	0.90

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	83.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.50 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.90 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	83.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.80 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.90 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.90 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	83.78 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.90 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.90 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.90 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	83.78 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.90 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.90 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.90 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918013\|NODE_5101_length_1101_cov_7.286104	All Organisms → cellular organisms → Bacteria → Acidobacteria	1133	Open in IMG/M
3300001372\|YBBDRAFT_1183900	All Organisms → cellular organisms → Bacteria → Acidobacteria	761	Open in IMG/M
3300003465\|P52013CM_1096426	All Organisms → cellular organisms → Bacteria → Acidobacteria	599	Open in IMG/M
3300004114\|Ga0062593_102739521	All Organisms → cellular organisms → Bacteria → Acidobacteria	562	Open in IMG/M
3300004157\|Ga0062590_102130457	All Organisms → cellular organisms → Bacteria → Acidobacteria	585	Open in IMG/M
3300004157\|Ga0062590_102596032	All Organisms → cellular organisms → Bacteria → Acidobacteria	538	Open in IMG/M
3300004463\|Ga0063356_106524525	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300005331\|Ga0070670_101628807	All Organisms → cellular organisms → Bacteria → Acidobacteria	593	Open in IMG/M
3300005334\|Ga0068869_101535173	All Organisms → cellular organisms → Bacteria → Acidobacteria	592	Open in IMG/M
3300005338\|Ga0068868_100370484	All Organisms → cellular organisms → Bacteria → Acidobacteria	1230	Open in IMG/M
3300005344\|Ga0070661_100867852	All Organisms → cellular organisms → Bacteria → Acidobacteria	743	Open in IMG/M
3300005354\|Ga0070675_100757703	All Organisms → cellular organisms → Bacteria → Acidobacteria	886	Open in IMG/M
3300005356\|Ga0070674_101351159	All Organisms → cellular organisms → Bacteria → Acidobacteria	637	Open in IMG/M
3300005438\|Ga0070701_10048824	All Organisms → cellular organisms → Bacteria	2186	Open in IMG/M
3300005438\|Ga0070701_11206730	All Organisms → cellular organisms → Bacteria → Acidobacteria	537	Open in IMG/M
3300005439\|Ga0070711_100120944	All Organisms → cellular organisms → Bacteria	1936	Open in IMG/M
3300005441\|Ga0070700_100527736	All Organisms → cellular organisms → Bacteria → Acidobacteria	913	Open in IMG/M
3300005456\|Ga0070678_100140042	All Organisms → cellular organisms → Bacteria	1935	Open in IMG/M
3300005466\|Ga0070685_10136475	All Organisms → cellular organisms → Bacteria	1540	Open in IMG/M
3300005530\|Ga0070679_101715694	All Organisms → cellular organisms → Bacteria → Acidobacteria	576	Open in IMG/M
3300005535\|Ga0070684_101622075	All Organisms → cellular organisms → Bacteria → Acidobacteria	610	Open in IMG/M
3300005564\|Ga0070664_102143475	All Organisms → cellular organisms → Bacteria → Acidobacteria	530	Open in IMG/M
3300005578\|Ga0068854_101559306	All Organisms → cellular organisms → Bacteria → Acidobacteria	601	Open in IMG/M
3300005615\|Ga0070702_101725324	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M
3300005616\|Ga0068852_100853187	All Organisms → cellular organisms → Bacteria → Acidobacteria	926	Open in IMG/M
3300005617\|Ga0068859_100590657	All Organisms → cellular organisms → Bacteria → Proteobacteria	1204	Open in IMG/M
3300005618\|Ga0068864_100482109	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300005719\|Ga0068861_102327116	All Organisms → cellular organisms → Bacteria → Acidobacteria	538	Open in IMG/M
3300005840\|Ga0068870_10591402	All Organisms → cellular organisms → Bacteria → Acidobacteria	753	Open in IMG/M
3300005842\|Ga0068858_100354614	All Organisms → cellular organisms → Bacteria → Acidobacteria	1405	Open in IMG/M
3300005842\|Ga0068858_102549098	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300005843\|Ga0068860_100697674	All Organisms → cellular organisms → Bacteria → Acidobacteria	1025	Open in IMG/M
3300005843\|Ga0068860_101364838	All Organisms → cellular organisms → Bacteria → Acidobacteria	730	Open in IMG/M
3300005843\|Ga0068860_101669825	All Organisms → cellular organisms → Bacteria → Acidobacteria	659	Open in IMG/M
3300006237\|Ga0097621_100500293	All Organisms → cellular organisms → Bacteria → Acidobacteria	1101	Open in IMG/M
3300006853\|Ga0075420_101596499	All Organisms → cellular organisms → Bacteria → Acidobacteria	559	Open in IMG/M
3300006880\|Ga0075429_101531567	All Organisms → cellular organisms → Bacteria → Acidobacteria	580	Open in IMG/M
3300009098\|Ga0105245_10473446	All Organisms → cellular organisms → Bacteria → Proteobacteria	1265	Open in IMG/M
3300009098\|Ga0105245_10577838	All Organisms → cellular organisms → Bacteria → Acidobacteria	1148	Open in IMG/M
3300009098\|Ga0105245_11300771	All Organisms → cellular organisms → Bacteria → Acidobacteria	776	Open in IMG/M
3300009156\|Ga0111538_13203428	All Organisms → cellular organisms → Bacteria → Acidobacteria	570	Open in IMG/M
3300009176\|Ga0105242_13132722	All Organisms → cellular organisms → Bacteria → Acidobacteria	513	Open in IMG/M
3300009553\|Ga0105249_10042336	All Organisms → cellular organisms → Bacteria	4141	Open in IMG/M
3300010371\|Ga0134125_12585187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	552	Open in IMG/M
3300010379\|Ga0136449_103728516	All Organisms → cellular organisms → Bacteria → Acidobacteria	575	Open in IMG/M
3300010399\|Ga0134127_13125857	All Organisms → cellular organisms → Bacteria → Acidobacteria	540	Open in IMG/M
3300010399\|Ga0134127_13649379	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300010403\|Ga0134123_12445756	All Organisms → cellular organisms → Bacteria → Acidobacteria	588	Open in IMG/M
3300011119\|Ga0105246_10611474	All Organisms → cellular organisms → Bacteria → Acidobacteria	943	Open in IMG/M
3300011428\|Ga0137456_1143220	All Organisms → cellular organisms → Bacteria → Acidobacteria	640	Open in IMG/M
3300011430\|Ga0137423_1088310	All Organisms → cellular organisms → Bacteria → Acidobacteria	922	Open in IMG/M
3300012172\|Ga0137320_1020643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1307	Open in IMG/M
3300012212\|Ga0150985_107672896	All Organisms → cellular organisms → Bacteria → Acidobacteria	577	Open in IMG/M
3300012212\|Ga0150985_122688697	All Organisms → cellular organisms → Bacteria → Acidobacteria	688	Open in IMG/M
3300012354\|Ga0137366_10603989	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300012469\|Ga0150984_119811401	All Organisms → cellular organisms → Bacteria	2643	Open in IMG/M
3300012901\|Ga0157288_10425168	All Organisms → cellular organisms → Bacteria → Acidobacteria	503	Open in IMG/M
3300013308\|Ga0157375_13415198	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300014325\|Ga0163163_10605935	All Organisms → cellular organisms → Bacteria → Acidobacteria	1158	Open in IMG/M
3300014325\|Ga0163163_10985978	All Organisms → cellular organisms → Bacteria → Acidobacteria	906	Open in IMG/M
3300014325\|Ga0163163_12475642	All Organisms → cellular organisms → Bacteria → Acidobacteria	577	Open in IMG/M
3300014875\|Ga0180083_1047394	All Organisms → cellular organisms → Bacteria → Acidobacteria	878	Open in IMG/M
3300014968\|Ga0157379_11957605	All Organisms → cellular organisms → Bacteria → Acidobacteria	578	Open in IMG/M
3300014968\|Ga0157379_12258262	All Organisms → cellular organisms → Bacteria → Acidobacteria	541	Open in IMG/M
3300014969\|Ga0157376_11111169	All Organisms → cellular organisms → Bacteria → Acidobacteria	816	Open in IMG/M
3300014969\|Ga0157376_12813541	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300015371\|Ga0132258_12789584	All Organisms → cellular organisms → Bacteria → Acidobacteria	1217	Open in IMG/M
3300015372\|Ga0132256_103809367	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300017792\|Ga0163161_11457639	All Organisms → cellular organisms → Bacteria → Acidobacteria	600	Open in IMG/M
3300017965\|Ga0190266_10531533	All Organisms → cellular organisms → Bacteria → Acidobacteria	694	Open in IMG/M
3300018047\|Ga0187859_10104731	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1489	Open in IMG/M
3300018064\|Ga0187773_10630376	All Organisms → cellular organisms → Bacteria → Acidobacteria	659	Open in IMG/M
3300018481\|Ga0190271_13883095	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300018482\|Ga0066669_11497302	All Organisms → cellular organisms → Bacteria → Acidobacteria	613	Open in IMG/M
3300019997\|Ga0193711_1049681	All Organisms → cellular organisms → Bacteria → Acidobacteria	503	Open in IMG/M
3300021078\|Ga0210381_10090027	All Organisms → cellular organisms → Bacteria → Acidobacteria	983	Open in IMG/M
3300023261\|Ga0247796_1009153	All Organisms → cellular organisms → Bacteria → Acidobacteria	1397	Open in IMG/M
3300025817\|Ga0210144_1135417	All Organisms → cellular organisms → Bacteria → Acidobacteria	707	Open in IMG/M
3300025899\|Ga0207642_10294948	All Organisms → cellular organisms → Bacteria → Acidobacteria	938	Open in IMG/M
3300025920\|Ga0207649_10416251	All Organisms → cellular organisms → Bacteria → Acidobacteria	1008	Open in IMG/M
3300025925\|Ga0207650_10371048	All Organisms → cellular organisms → Bacteria → Acidobacteria	1180	Open in IMG/M
3300025926\|Ga0207659_10544706	All Organisms → cellular organisms → Bacteria → Acidobacteria	986	Open in IMG/M
3300025933\|Ga0207706_11544688	All Organisms → cellular organisms → Bacteria → Acidobacteria	540	Open in IMG/M
3300025936\|Ga0207670_11628436	All Organisms → cellular organisms → Bacteria → Acidobacteria	549	Open in IMG/M
3300025940\|Ga0207691_11516371	All Organisms → cellular organisms → Bacteria → Acidobacteria	547	Open in IMG/M
3300025941\|Ga0207711_10976507	All Organisms → cellular organisms → Bacteria → Acidobacteria	786	Open in IMG/M
3300025945\|Ga0207679_11595790	All Organisms → cellular organisms → Bacteria → Acidobacteria	598	Open in IMG/M
3300025960\|Ga0207651_10550042	All Organisms → cellular organisms → Bacteria → Acidobacteria	1004	Open in IMG/M
3300025981\|Ga0207640_10094625	All Organisms → cellular organisms → Bacteria	2078	Open in IMG/M
3300025981\|Ga0207640_11174522	All Organisms → cellular organisms → Bacteria → Acidobacteria	681	Open in IMG/M
3300026023\|Ga0207677_10544819	All Organisms → cellular organisms → Bacteria → Acidobacteria	1010	Open in IMG/M
3300026023\|Ga0207677_11156538	All Organisms → cellular organisms → Bacteria → Acidobacteria	707	Open in IMG/M
3300026035\|Ga0207703_10857768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	869	Open in IMG/M
3300026088\|Ga0207641_10382121	All Organisms → cellular organisms → Bacteria	1349	Open in IMG/M
3300026089\|Ga0207648_10522061	All Organisms → cellular organisms → Bacteria → Acidobacteria	1088	Open in IMG/M
3300026089\|Ga0207648_11002032	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300026118\|Ga0207675_101477722	All Organisms → cellular organisms → Bacteria → Acidobacteria	700	Open in IMG/M
3300026118\|Ga0207675_102485597	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300031226\|Ga0307497_10075502	All Organisms → cellular organisms → Bacteria	1253	Open in IMG/M
3300031538\|Ga0310888_10478819	All Organisms → cellular organisms → Bacteria → Acidobacteria	742	Open in IMG/M
3300031547\|Ga0310887_10408869	All Organisms → cellular organisms → Bacteria → Acidobacteria	801	Open in IMG/M
3300031562\|Ga0310886_10382580	All Organisms → cellular organisms → Bacteria → Acidobacteria	826	Open in IMG/M
3300031908\|Ga0310900_11385762	All Organisms → cellular organisms → Bacteria → Acidobacteria	590	Open in IMG/M
3300031938\|Ga0308175_101764106	All Organisms → cellular organisms → Bacteria → Acidobacteria	693	Open in IMG/M
3300032075\|Ga0310890_10801403	All Organisms → cellular organisms → Bacteria → Acidobacteria	746	Open in IMG/M
3300032122\|Ga0310895_10159199	All Organisms → cellular organisms → Bacteria → Acidobacteria	983	Open in IMG/M
3300032770\|Ga0335085_12395876	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300032828\|Ga0335080_10885589	All Organisms → cellular organisms → Bacteria → Acidobacteria	917	Open in IMG/M
3300032893\|Ga0335069_11300150	All Organisms → cellular organisms → Bacteria → Acidobacteria	791	Open in IMG/M
3300032955\|Ga0335076_10573866	All Organisms → cellular organisms → Bacteria → Acidobacteria	1010	Open in IMG/M
3300033501\|Ga0326732_1052611	All Organisms → cellular organisms → Bacteria → Acidobacteria	672	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	56.76%
Environmental	Environmental	43.24%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	56.76%
Terrestrial	Environmental → Terrestrial	36.04%
Aquatic	Environmental → Aquatic	7.21%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	35.14%
Rhizoplane	Host-Associated → Plants → Rhizoplane	27.03%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.13%
Sediment	Environmental → Aquatic → Sediment	3.60%
Roots	Host-Associated → Plants → Roots	3.60%
Freshwater	Environmental → Aquatic → Freshwater	1.80%
Marine	Environmental → Aquatic → Marine	1.80%
Peat	Environmental → Terrestrial → Peat	0.90%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	23.42%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	22.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.51%
Soil	Host-Associated → Plants → Rhizosphere → Soil	12.61%
Loam	Environmental → Terrestrial → Soil → Loam	8.11%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.60%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	3.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.70%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.90%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.90%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.90%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.90%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	23.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	12.61%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.11%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.31%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.60%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.60%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	3.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.70%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.80%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.90%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.90%
Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment	0.90%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.90%
Mine Drainage	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage	0.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	10.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	7.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.50%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.60%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.60%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	2.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.70%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.80%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.80%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.80%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.90%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.90%
Marine Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine Estuarine	0.90%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.90%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.90%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.90%
Ore Pile And Mine Drainage Contaminated Soil	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage → Ore Pile And Mine Drainage Contaminated Soil	0.90%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.90%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.90%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.90%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
3300001372	YB-Back-sed	Environmental	Open in IMG/M
3300003465	Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P5 sample	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011428	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT615_2	Environmental	Open in IMG/M
3300011430	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2	Environmental	Open in IMG/M
3300012172	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT366_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014875	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_1_16_10D	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019997	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300023261	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S166-409R-6	Environmental	Open in IMG/M
3300025817	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033501	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF12FN SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Iowa-Corn-GraphCirc_03209680	2140918013	Soil	DPTVFAKPVEFRFTLKRVPAEQQILEYSCLEGERSRQHFTEEDGGNKQRVQ
YBBDRAFT_11839001	3300001372	Marine Estuarine	DPNTILYEATVTDPTVFVKPVEFRFTLKRVPAAQQILEYSCLEGERSRQHFTEEDGGTKRRVVR*
P52013CM_10964262	3300003465	Ore Pile And Mine Drainage Contaminated Soil	GSLTGAEPVEYRFTLKRVPAEQQMLEYSCHEGERSRQHFTEEDGGKQQRTR*
Ga0062593_1027395211	3300004114	Soil	PTVFVKPVQMRFTLKRVPKEQQILEYSCLEGERSLQHYTEEDGGTKQRAR*
Ga0062590_1021304572	3300004157	Soil	TDPTVFVKPVEMRFTLKRVPAEQQILEYSCLEGERSLQHYTEEDGGKKVRVK*
Ga0062590_1025960322	3300004157	Soil	LVDAGTILYEATVTDPTVFVKPIQMRFTLKRVPPEQQILEYSCLEGERSLQHYTDEDGGTKRRVK*
Ga0063356_1065245252	3300004463	Arabidopsis Thaliana Rhizosphere	TILYEATITDPTVFVKPVEMRFTLKRVPADQQILEYSCLEGERSLQNYTEEDGGKKVRVK
Ga0070670_1016288072	3300005331	Switchgrass Rhizosphere	VTDPTVFVKPVEMRFTLKRVPAEQQILEYSCLEGERSRQHFTEEDGGKQQRVR*
Ga0068869_1015351732	3300005334	Miscanthus Rhizosphere	ILYEATITDPTVFIKPVEMRFTLKRVPADQQILEYSCLEGERSLQHYTEEDGGKKARVK*
Ga0068868_1003704843	3300005338	Miscanthus Rhizosphere	YEATVTDATVFLKPIQFRFTLKRVPAEQQILEYSCLEGERSRQHFTEEDGGNKQRAK*
Ga0070661_1008678521	3300005344	Corn Rhizosphere	YEATITDPTVFIKPFEMRFTLKRVPADQQILEYSCLEGERSLQHYTEEDGGKKARVK*
Ga0070675_1007577032	3300005354	Miscanthus Rhizosphere	DTILYEASISDPTVFVKPVQMRFTLKRVPKEQQILEYSCLEGERSLQHYTEEDGGTKQRAR*
Ga0070674_1013511591	3300005356	Miscanthus Rhizosphere	VFVKPVQMRFTLKRVPAEQQILEYSCLEGERSLQHYTEEDGGKKRRVK*
Ga0070701_100488243	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	ITDPTVFVKPVEMRFTLKRVPAEQQILEYSCLEGERSLQHYTDEDGGKKRRVK*
Ga0070701_112067301	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	TVSDPTVFVKPIQMRFTLKRVPKEQQILEYSCLEGERSLQHYTQEDGGTKQRAR*
Ga0070711_1001209441	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	RFTLLDRDTMQYDATVTDPTVFVKPVEMRFTLKRVPPEQQILEYSCLEGERSLQHYTEEDGGRKRRER*
Ga0070700_1005277361	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	YEATVTDPTVFVKPIEMRFTLKRVPQEQQILEYSCLEGERSLQHYTDEDGGKKRRAK*
Ga0070678_1001400423	3300005456	Miscanthus Rhizosphere	DPTVFVKPIEFRFTLKRVPADQQILEYSCLEGERSLQHYTNEDGGKKQRAK*
Ga0070685_101364753	3300005466	Switchgrass Rhizosphere	RDTILYEATVTDPTVFVKPVEMRFTLKRVPPEQQILEYSCLEGERSLQHYTNEDGGKKQRAK*
Ga0070679_1017156942	3300005530	Corn Rhizosphere	DTILYEATVTDPTVFVKPVEMRFTLKRVPAEQQILEYSCLEGERSLQHYTDEDGGKKRRVK*
Ga0070684_1016220752	3300005535	Corn Rhizosphere	EATVTDPTVFVKPVEMRFTLKRVPAEQQILEYSCLEGERSLEHYTEEDGGRKRRQR*
Ga0070664_1021434751	3300005564	Corn Rhizosphere	TVTDPTVFVKPVEMRFTLKRVPAEQQILEYSCLEGERSRQHFTEEDGGKQQRVR*
Ga0068854_1015593062	3300005578	Corn Rhizosphere	QYEATITDPTVFVRPVQMRFTLKRVPAEQQILEYSCLEGERSLQHYTDEDGGKKRRQP*
Ga0070702_1017253241	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	VFVKPVEMRFTLKRVPPEQQILEYSCLEGERSLQHYTSEDGGKKPRAK*
Ga0068852_1008531871	3300005616	Corn Rhizosphere	VFVKPVEMRFTLKRVPAEQQILEYSCLEGERSLQHYTEEDGGKKLRTK*
Ga0068859_1005906573	3300005617	Switchgrass Rhizosphere	IQYEATVTDPTVFVKPIEFRFTLKRVPSEQQILEYSCLEGERSLQHYTNEDGGKKQRAK*
Ga0068864_1004821093	3300005618	Switchgrass Rhizosphere	PTVFVRPVQMRFTLKRVPAEQQILEYSCLEGERSLQHYTEEDGGKKRRAQ*
Ga0068861_1023271162	3300005719	Switchgrass Rhizosphere	FVKPIEMRFTLKRVPAEQQILEYSCLEGERSLQHYTEEDGGKKVRVK*
Ga0068870_105914021	3300005840	Miscanthus Rhizosphere	TDPTVFVKPVEMRFTLKRVPAEQQILEYSCLEGERSLQHYTDEDGGKKRRVK*
Ga0068858_1003546143	3300005842	Switchgrass Rhizosphere	ATVTDATVFLKPIQFRFTLKRVPAEQQILEYSCLEGERSRQHFTEEDGGNKQRAK*
Ga0068858_1025490982	3300005842	Switchgrass Rhizosphere	DTILYEATVTDPTVFVKPVQMRFTLKRVPAEQQILEYSCLEGERSLQHYTDEDGGKKRRAK*
Ga0068860_1006976741	3300005843	Switchgrass Rhizosphere	TIQYEATITDPTVFVRPVQMRFTLKRVPAEQQILEYSCLEGERSLQHYTDEDGGRKRRAQ
Ga0068860_1013648381	3300005843	Switchgrass Rhizosphere	TVFVKPVQMRFTLKRVPPEQQILEYSCLEGERSLQHYTDEDGGKKKREK*
Ga0068860_1016698252	3300005843	Switchgrass Rhizosphere	DTILYEATITDPTVFVKPVEMRFTLKRVPAEQQILEYSCLEGERSLQHYTDEDGGKKRRVK*
Ga0097621_1005002933	3300006237	Miscanthus Rhizosphere	PTVFVKPVQMRFTLKRVPAEQQILEYSCLEGERSLQHYTEEDGGKKQRVK*
Ga0075420_1015964991	3300006853	Populus Rhizosphere	ITDPTVFVKPVQMRFTLKRVPAEQQILEYSCLEGERSLQHYTEEDGGRKERVK*
Ga0075429_1015315671	3300006880	Populus Rhizosphere	YEATITDPTVFVKPVEMRFTLKRVPAEQQILEYSCLEGERSLQHYTDEDGGKKRRVK*
Ga0105245_104734461	3300009098	Miscanthus Rhizosphere	LMDRDTILYEATVTDPTVFVKPVQMRFTLKRVPAEQQILEYSCLEGERSLQHYTDEDGGRKRRAK*
Ga0105245_105778381	3300009098	Miscanthus Rhizosphere	VFVRPVQMRFTLKRLPAEQQILEYSCLEGERSLQHYTDEDGGKKRRQQ*
Ga0105245_113007712	3300009098	Miscanthus Rhizosphere	TLTDPDTILYEATVSDPTVFVKPIQMRFTLKRVPKEQQILEYSCLEGERSLQHYTQEDGGRKQRAK*
Ga0111538_132034282	3300009156	Populus Rhizosphere	VFVKPIEFRFTLKRVPAEQQILEYSCLEGERSLQHYTDEDGGKKRRAK*
Ga0105242_131327221	3300009176	Miscanthus Rhizosphere	TDSTVFVRPIQMRFTLKRVPADQQILEYSCLEGERSLQHYTDEDGGKKRRAK*
Ga0105249_100423364	3300009553	Switchgrass Rhizosphere	DPTVFVKPVQMRFTLKRVPKEQQILEYSCLEGERSLQHYTKEDGGTKQRAR*
Ga0134125_125851871	3300010371	Terrestrial Soil	TVTDPTVFVKPVEMRFTLKRVPPEQQILEYSCLEGERSLQHYTSEDGGKKSRAK*
Ga0136449_1037285161	3300010379	Peatlands Soil	ILYEANISDPTVFVKPVQMRFTLKRVPAEQQILEYSCLEGERSLQHYTEEDGGRKQRAK*
Ga0134127_131258571	3300010399	Terrestrial Soil	RDTISYQATVTDPTVFVKPIEMRFTLKRVPPEQQILEYSCLEGERSLQHYTSEDGGKKSRAK*
Ga0134127_136493792	3300010399	Terrestrial Soil	ITDPTVFVKPVEMRFTLKRVPAEQQILEYSCLEGERSLQHYTEEDGGKKVRVK*
Ga0134123_124457562	3300010403	Terrestrial Soil	PTVFVKPVEMRFTLKRVPAEQQILEYSCLEGERSLQHYTEEDGGKKARVK*
Ga0105246_106114742	3300011119	Miscanthus Rhizosphere	VDHDTIEYEAPITDPTVFVRPVQMRFTLKRVPAEQQILEYSCLEGERSLQHYTDEDGGKKRRQQ*
Ga0137456_11432201	3300011428	Soil	PTVFVKPVEFRFTLKRVPAEQQILEYSCLEGERSRQHFTEDDGGKKQRAAR*
Ga0137423_10883102	3300011430	Soil	ERFRLLDRDTILYEATVTDPTVFVKPIEMRFTLKRVPAEQQILEYSCLEGERSLQHFTDEDGGKKRRVK*
Ga0137320_10206431	3300012172	Soil	PTVFVKPVEMRFTLKRVPAEQQILEYSCLEGERSLQHYTEEDGGKKQRVR*
Ga0150985_1076728962	3300012212	Avena Fatua Rhizosphere	ATITDPTVFVTPVQMRFTLKRVPAEQQILEYSCLEGERSLQHYTEEDGGRKRREQ*
Ga0150985_1226886971	3300012212	Avena Fatua Rhizosphere	VTDPTVFVKPVQMRFTLKRVPPEQQILEYSCLEGERSLQHYTEEDGGRKRREK*
Ga0137366_106039891	3300012354	Vadose Zone Soil	MTRPSRIFANLVEMRFTLKRVPPEQQILEYSCLEGERSLQHYTEEDGGKKRRVR*
Ga0150984_1198114011	3300012469	Avena Fatua Rhizosphere	FSLVDRDTIQYDATITDRTVFVTPVQMRFTLKRIPAEQQILEYSCLEGERSLQHYTEEDGGRKRREQ*
Ga0157288_104251681	3300012901	Soil	LYEATITDPTVFVKPVEMRFTLKRVPAEQQILEYSCLEGERSLQHYTEEDGGKKLRVK*
Ga0157375_134151981	3300013308	Miscanthus Rhizosphere	TLMDRDTILYEATVTDPTVFVKPVQMRFTLKRVPAEQQILEYSCLEGERSLQHYTEEDGGKKRRVK*
Ga0163163_106059351	3300014325	Switchgrass Rhizosphere	ILYEATITDPTVFTKPVEMRFTLKRVPADQQILEYSCLEGERSLQHYTEDDGGKKVRVK*
Ga0163163_109859782	3300014325	Switchgrass Rhizosphere	DTILYEATVTDPTVFVKPVQMRFTLKRVPAEQQILEYSCLEGERSLQHYTEEDGGKKQRVK*
Ga0163163_124756421	3300014325	Switchgrass Rhizosphere	TIVYEATISDPTVFVKPVEMRFTLKRVPADQQILEYSCLEGERSLQHYTEEDGGRKLRVK
Ga0180083_10473941	3300014875	Soil	DPTVFVKPIEMRFTLKRVPPEQQILEYSCLEGERSLQHYTEEDGGKKQRVR*
Ga0157379_119576052	3300014968	Switchgrass Rhizosphere	DPDTILYEATVSDPTVFVKPIQMRFTLKRVPKEQQILEYSCLEGERSLQHYTQEDGGRKQRAK*
Ga0157379_122582621	3300014968	Switchgrass Rhizosphere	TIADPTVFVRPVQMRFTLKRVPAEQQILEYSCLEGERSLQHYTDEDGGRKRRAR*
Ga0157376_111111691	3300014969	Miscanthus Rhizosphere	TILYEATVTDPTVFVKPIQMRFTLKRVPAEQQILEYSCLEGERSLQHYTEEDGGKKQRVK
Ga0157376_128135411	3300014969	Miscanthus Rhizosphere	ILYEATITDPTVFVKPVEMRFTLKRVPAEQQILEYSCLEGERSLQHYTEEDGGKKLRTK*
Ga0132258_127895841	3300015371	Arabidopsis Rhizosphere	RFTLIDRDRILYEATVSDPTVFVKPIQMRFTLKRVPAEQQILEYSCLEGERSLQHYTDEDGGRKRRVK*
Ga0132256_1038093671	3300015372	Arabidopsis Rhizosphere	TILYEATVTDLTVFVKPVEMRFTLKRVPAEQQILEYSCLEGERSLQHYTNEDGGKKRRAR
Ga0163161_114576391	3300017792	Switchgrass Rhizosphere	FRLLDRETIQYEATVTDPTVFVKPIEFRFTLKRVPSEQQILEYSCLEGERSLQHYTNEDGGKKQRAK
Ga0190266_105315331	3300017965	Soil	EATVTDPTVFVKPIEMRFTLKRVPQEQQILEYSCLEGERSLQHYTDEDGGKKRRAK
Ga0187859_101047311	3300018047	Peatland	DPTVFVKPVQMRFTLKRVPAEQQILEYSCLEGERSLQHYTEEDGGRKQRSR
Ga0187773_106303762	3300018064	Tropical Peatland	LYEATVTDPTVFVKPLQMRFSLKRVPAEQQILEYSCLEGERSLQHYTDEDGGKKRRAR
Ga0190271_138830951	3300018481	Soil	TILYEATVTDRTVFVKPVEFRFTLKRVPAEQQILEYSCLEGERSRQHFTEEDGGNQQRVP
Ga0066669_114973022	3300018482	Grasslands Soil	MDPTVFVKPVQMRFTLKRVPAEQQILEYSCLEGERSLQHYTEEDGGKKARVK
Ga0193711_10496812	3300019997	Soil	RFTLVDRDTILYQATVTDPTVFVEPVEMRFTLKRVPPEQQILEYSCLEGERSLQHYTEEDGGKKQRVR
Ga0210381_100900271	3300021078	Groundwater Sediment	ADTILYEATVTDPPVFVKPVQMRFTLKRVPPEQQILEYSCLEGERSLQHYTAEDGGKKRREK
Ga0247796_10091533	3300023261	Soil	LLDRDTILYEATVTDPTVFVTPIEMRFTLKRVPQEQQILEYSCLEGERSLQHYTDEDGGKKRRAK
Ga0210144_11354171	3300025817	Natural And Restored Wetlands	ATITDPTVFVKPVEMRFTLKRVPAEQQILEYSCLEGERSLQHYTEEDGGTKPRAQ
Ga0207642_102949482	3300025899	Miscanthus Rhizosphere	EATITDPTVFVRPVQMRFTLKRVPAEQQILEYSCLEGERSLQHYTDEDGGKKRRQQ
Ga0207649_104162512	3300025920	Corn Rhizosphere	TILYEATVTDPTVFVKPIEFRFTLKRVPADQQILEYSCLEGERSLQHYTDEDGGKKRRQQ
Ga0207650_103710481	3300025925	Switchgrass Rhizosphere	ATITDPTVFIKPVEMRFTLKRVPADQQILEYSCLEGERSLQHYTEEDGGKKVRVK
Ga0207659_105447062	3300025926	Miscanthus Rhizosphere	TDPDTILYEASISDPTVFVKPVQMRFTLKRVPKEQQILEYSCLEGERSLQHYTEEDGGTKQRAR
Ga0207706_115446882	3300025933	Corn Rhizosphere	ATVTDPTVFVKPIEFRFTLKRVPSEQQILEYSCLEGERSLQHYTNEDGGKKQRAK
Ga0207670_116284362	3300025936	Switchgrass Rhizosphere	TILYEATITDPTVFVKPVEMRFTLKRVPAEQQILEYSCLEGERSLQHYTEEDGGKKLRTK
Ga0207691_115163712	3300025940	Miscanthus Rhizosphere	FTLVDRDTILYEATVTDPTVFVKPIEMRFTLKRVPPEQQILEYSCLEGERSLQHYTEEDGGKKQRVR
Ga0207711_109765071	3300025941	Switchgrass Rhizosphere	DTILYEATVTDPTVFVKPVQMRFTLKRVPPEQQILEYSCLEGERSLQHYTDEDGGKKRRA
Ga0207679_115957902	3300025945	Corn Rhizosphere	DTIVYEATISDPTVFVKPVEMRFTLKRVPADQQILEYSCLEGERSLQHYTEEDGGRKLRV
Ga0207651_105500422	3300025960	Switchgrass Rhizosphere	PTVFVKPVQMRFTLKRVPAEQQILEYSCLEGERSLQHYTEEDGGKKRRVK
Ga0207640_100946251	3300025981	Corn Rhizosphere	TVFVKPIEFRFTLKRVPSEQQILEYSCLEGERSLQHYTNEDGGKKQRAK
Ga0207640_111745221	3300025981	Corn Rhizosphere	TIQYEATITDPTVFVRPVQMRFTLKRVPAEQQILEYSCLEGERSLQHYTDEDGGKKRRQP
Ga0207677_105448192	3300026023	Miscanthus Rhizosphere	FVKPVQMRFTLKRVPAEQQILEYSCLEGERSLQHYTEEDGGTKQRAR
Ga0207677_111565382	3300026023	Miscanthus Rhizosphere	DPTVFVKPIEFRFTLKRVPADQQILEYSCLEGERSLQHYTNEDGGKKQRAK
Ga0207703_108577682	3300026035	Switchgrass Rhizosphere	VFTKPVEMRFTLKRVPAEQQILEYSCLEGERSLQHYTEEDGGKKVRVK
Ga0207641_103821213	3300026088	Switchgrass Rhizosphere	ATVTDPTVFVTPIEFRFTLKRVPAEQQILEYSCLEGERSLQHYTAEDGGRKRRAK
Ga0207648_105220612	3300026089	Miscanthus Rhizosphere	LYEATITDPTVFVKPVEMRFTLKRVPAEQQILEYSCLEGERSLQHYTEEDGGKKVRVK
Ga0207648_110020321	3300026089	Miscanthus Rhizosphere	YEATVTDATVFLKPIQFRFTLKRVPAEQQILEYSCLEGERSRQHFTEEDGGNKQRAK
Ga0207675_1014777221	3300026118	Switchgrass Rhizosphere	YEATVTDPTVFVKPVEMRFTLKRVPAEQQILEYSCLEGERSLQHYTEEDGGKKVRVK
Ga0207675_1024855971	3300026118	Switchgrass Rhizosphere	ITDPTVFVKPVEMRFTLKRVPADQQILEYSCLEGERSLQHYTEEDGGKKVRVK
Ga0307497_100755023	3300031226	Soil	ITDPTVFVKPVEMRFTLKRVPAEQQILEYSCLEGERSLQHYTDEDGGKKRRVK
Ga0310888_104788192	3300031538	Soil	ITDPTVFVKPVEMKFTLKRVPAEQQILEYSCLEGERSLQHYTDEDGGKKRRVK
Ga0310887_104088691	3300031547	Soil	EATITDPTVFVKPVEMRFTLKRVPAEQQILEYSCLEGERSLQHYTDEDGGKKRRVK
Ga0310886_103825801	3300031562	Soil	ADRDTILYEATVTDPTVFAKPVEFRFTLKRVPAEQQILEYSCLEGERSLQHYTDEDGGKKRRVK
Ga0310900_113857622	3300031908	Soil	QYEATITDPTVFVRPVQMRFTLKRVPAEQQILEYSCLEGERSLQHYTDEDGGKKRRQQ
Ga0308175_1017641062	3300031938	Soil	RLLDPDTILYEATVTDPTVFVKPIEMRFTLKRVPREQQILEYSCLEGERSLQHYTDEDGGKKRRAK
Ga0310890_108014031	3300032075	Soil	VFVRPVQMRFTLKRVPAEQQILEYSCLEGERSLQHYTDEDGGKKRRQQ
Ga0310895_101591991	3300032122	Soil	YEATVTDPTVFVKPIEFRFTLKRVPAEQQILEYSCLEGERSLQHYTDEDGGKKRRVK
Ga0335085_123958761	3300032770	Soil	LLDRDTILYEATVTDPTVFVKPVEMRFTLKRVPPEQQILEYSCLEGERSLQHYTEEDGGRKQRQR
Ga0335080_108855891	3300032828	Soil	QYDATITDPTVFVRPVQMRFTLKRVPAEQQILEYSCLEGERSLQHYTDEDGGRKRRAR
Ga0335069_113001501	3300032893	Soil	ILYEASISDPTVFVKPVQMRFTLKRVPAEQQILEYSCLEGERSLQHYTEEDGGRKQRAR
Ga0335076_105738661	3300032955	Soil	FTLVDVDTILYEATVTDPTVFVKPVEMRFTLKRVPAAQQILEYSCLEGERSLQHYTDEDGGKKQRVK
Ga0326732_10526112	3300033501	Peat Soil	DPTVFVKPVEMRFTLKRVPPEQQILEYSCLEGERSLQHYTSEDGGKKSRAK

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F086345

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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