NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F086417

Metagenome / Metatranscriptome Family F086417

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Overview Alignments Structure & Topology Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F086417
Family Type Metagenome / Metatranscriptome
Number of Sequences 110
Average Sequence Length 39 residues
Representative Sequence VHLMHPILIFTMGQVRQRNGVKPPETRVLDVKYVVRNQTD
Number of Associated Samples 69
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 77.27 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 98.18 %
Associated GOLD sequencing projects 69
AlphaFold2 3D model prediction Yes
3D model pTM-score0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (99.091 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere
(45.454 % of family members)
Environment Ontology (ENVO) Unclassified
(83.636 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant surface
(80.909 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 39.71%    Coil/Unstructured: 60.29%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A99.09 %
All OrganismsrootAll Organisms0.91 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005330|Ga0070690_101710677Not Available512Open in IMG/M
3300005335|Ga0070666_10486755Not Available893Open in IMG/M
3300005617|Ga0068859_102551493Not Available562Open in IMG/M
3300005618|Ga0068864_101980527Not Available588Open in IMG/M
3300005618|Ga0068864_102383716Not Available535Open in IMG/M
3300005841|Ga0068863_101721709Not Available636Open in IMG/M
3300005841|Ga0068863_101904606Not Available604Open in IMG/M
3300005841|Ga0068863_102326783Not Available545Open in IMG/M
3300005842|Ga0068858_102310151Not Available531Open in IMG/M
3300005843|Ga0068860_101902821Not Available616Open in IMG/M
3300005843|Ga0068860_102365518Not Available551Open in IMG/M
3300005843|Ga0068860_102433761Not Available543Open in IMG/M
3300010371|Ga0134125_12717850Not Available538Open in IMG/M
3300010399|Ga0134127_11395407Not Available771Open in IMG/M
3300014325|Ga0163163_11993143Not Available640Open in IMG/M
3300015280|Ga0182100_1081605Not Available541Open in IMG/M
3300015284|Ga0182101_1072424Not Available564Open in IMG/M
3300015310|Ga0182162_1071779Not Available627Open in IMG/M
3300015310|Ga0182162_1096768Not Available562Open in IMG/M
3300015310|Ga0182162_1102507Not Available550Open in IMG/M
3300015310|Ga0182162_1116587Not Available524Open in IMG/M
3300015310|Ga0182162_1120831Not Available517Open in IMG/M
3300015311|Ga0182182_1038712Not Available750Open in IMG/M
3300015311|Ga0182182_1087429Not Available569Open in IMG/M
3300015311|Ga0182182_1121686Not Available504Open in IMG/M
3300015315|Ga0182120_1107855Not Available557Open in IMG/M
3300015316|Ga0182121_1128047Not Available531Open in IMG/M
3300015317|Ga0182136_1070833Not Available654Open in IMG/M
3300015318|Ga0182181_1100587Not Available529Open in IMG/M
3300015327|Ga0182114_1131765Not Available549Open in IMG/M
3300015327|Ga0182114_1137022Not Available540Open in IMG/M
3300015329|Ga0182135_1126834Not Available546Open in IMG/M
3300015332|Ga0182117_1007188All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum1508Open in IMG/M
3300015332|Ga0182117_1151600Not Available528Open in IMG/M
3300015334|Ga0182132_1068949Not Available724Open in IMG/M
3300015334|Ga0182132_1169788Not Available502Open in IMG/M
3300015336|Ga0182150_1144742Not Available533Open in IMG/M
3300015337|Ga0182151_1139135Not Available542Open in IMG/M
3300015338|Ga0182137_1077414Not Available716Open in IMG/M
3300015340|Ga0182133_1131941Not Available592Open in IMG/M
3300015340|Ga0182133_1176044Not Available522Open in IMG/M
3300015348|Ga0182115_1195432Not Available648Open in IMG/M
3300015348|Ga0182115_1239925Not Available578Open in IMG/M
3300015349|Ga0182185_1199102Not Available606Open in IMG/M
3300015349|Ga0182185_1231153Not Available562Open in IMG/M
3300015352|Ga0182169_1204770Not Available645Open in IMG/M
3300015353|Ga0182179_1110051Not Available832Open in IMG/M
3300015353|Ga0182179_1199259Not Available637Open in IMG/M
3300015353|Ga0182179_1305211Not Available518Open in IMG/M
3300015354|Ga0182167_1310147Not Available558Open in IMG/M
3300015354|Ga0182167_1367679Not Available500Open in IMG/M
3300017414|Ga0182195_1159238Not Available576Open in IMG/M
3300017422|Ga0182201_1055101Not Available700Open in IMG/M
3300017435|Ga0182194_1024456Not Available988Open in IMG/M
3300017435|Ga0182194_1107274Not Available577Open in IMG/M
3300017439|Ga0182200_1078592Not Available652Open in IMG/M
3300017439|Ga0182200_1144459Not Available526Open in IMG/M
3300017439|Ga0182200_1156616Not Available511Open in IMG/M
3300017691|Ga0182212_1068423Not Available786Open in IMG/M
3300017692|Ga0182210_1137515Not Available539Open in IMG/M
3300017693|Ga0182216_1130946Not Available624Open in IMG/M
3300017694|Ga0182211_1046472Not Available991Open in IMG/M
3300025930|Ga0207701_10994388Not Available699Open in IMG/M
3300025931|Ga0207644_10901111Not Available741Open in IMG/M
3300028049|Ga0268322_1008897Not Available893Open in IMG/M
3300028049|Ga0268322_1010344Not Available858Open in IMG/M
3300028054|Ga0268306_1000194Not Available2341Open in IMG/M
3300028054|Ga0268306_1005444Not Available887Open in IMG/M
3300028054|Ga0268306_1024444Not Available567Open in IMG/M
3300028056|Ga0268330_1017778Not Available776Open in IMG/M
3300028056|Ga0268330_1029244Not Available660Open in IMG/M
3300028056|Ga0268330_1037663Not Available605Open in IMG/M
3300028056|Ga0268330_1038173Not Available602Open in IMG/M
3300028056|Ga0268330_1042391Not Available580Open in IMG/M
3300028056|Ga0268330_1061425Not Available506Open in IMG/M
3300028057|Ga0268352_1041048Not Available517Open in IMG/M
3300028057|Ga0268352_1041611Not Available514Open in IMG/M
3300028058|Ga0268332_1050395Not Available596Open in IMG/M
3300028058|Ga0268332_1063187Not Available548Open in IMG/M
3300028058|Ga0268332_1072276Not Available520Open in IMG/M
3300028064|Ga0268340_1037066Not Available683Open in IMG/M
3300028139|Ga0268355_1003991Not Available803Open in IMG/M
3300028141|Ga0268326_1008570Not Available585Open in IMG/M
3300028142|Ga0268347_1019342Not Available604Open in IMG/M
3300028142|Ga0268347_1027933Not Available540Open in IMG/M
3300028142|Ga0268347_1031357Not Available520Open in IMG/M
3300028143|Ga0268348_1007686Not Available734Open in IMG/M
3300028151|Ga0268308_1026856Not Available543Open in IMG/M
3300028154|Ga0268341_1007962Not Available765Open in IMG/M
3300028253|Ga0268316_1023240Not Available514Open in IMG/M
3300028256|Ga0268304_1000204Not Available2177Open in IMG/M
3300028256|Ga0268304_1000343Not Available1796Open in IMG/M
3300028262|Ga0268310_1008417Not Available901Open in IMG/M
3300028262|Ga0268310_1009227Not Available876Open in IMG/M
3300028262|Ga0268310_1010904Not Available833Open in IMG/M
3300028262|Ga0268310_1016522Not Available735Open in IMG/M
3300028379|Ga0268266_10996810Not Available811Open in IMG/M
3300028467|Ga0268333_1010141Not Available558Open in IMG/M
3300028469|Ga0268337_1010524Not Available607Open in IMG/M
3300028470|Ga0268307_1009830Not Available668Open in IMG/M
3300028470|Ga0268307_1018869Not Available548Open in IMG/M
3300028472|Ga0268315_1010611Not Available676Open in IMG/M
3300028523|Ga0268313_1000617Not Available1360Open in IMG/M
3300028525|Ga0268305_103566Not Available735Open in IMG/M
3300028526|Ga0268339_1015363Not Available553Open in IMG/M
3300028527|Ga0268335_1017450Not Available515Open in IMG/M
3300028529|Ga0268311_1026340Not Available523Open in IMG/M
3300032464|Ga0214492_1032026Not Available1007Open in IMG/M
3300032689|Ga0214497_1101501Not Available623Open in IMG/M
3300033530|Ga0314760_1186356Not Available502Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Switchgrass PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere45.45%
PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere38.18%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere9.09%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.73%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.82%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.91%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.91%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.91%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300015280Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015284Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015310Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015311Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015315Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015316Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015317Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015318Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015327Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015329Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015332Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015334Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015336Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015337Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015338Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015340Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015348Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015349Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015352Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015353Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015354Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017414Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017422Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017435Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017439Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017691Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017692Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017693Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017694Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028049Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_26JUN2017_LD1Host-AssociatedOpen in IMG/M
3300028054Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_15MAY2017_LD1Host-AssociatedOpen in IMG/M
3300028056Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_17JUL2017_LD1Host-AssociatedOpen in IMG/M
3300028057Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_18SEP2017_LD1Host-AssociatedOpen in IMG/M
3300028058Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_07AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028064Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_28AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028139Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_18SEP2017_LD1Host-AssociatedOpen in IMG/M
3300028141Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_17JUL2017_LD1Host-AssociatedOpen in IMG/M
3300028142Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_28AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028143Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_18SEP2017_LD1Host-AssociatedOpen in IMG/M
3300028151Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_05JUN2017_LD1Host-AssociatedOpen in IMG/M
3300028154Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_28AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028253Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_26JUN2017_LD1Host-AssociatedOpen in IMG/M
3300028256Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_15MAY2017_LD1Host-AssociatedOpen in IMG/M
3300028262Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_05JUN2017_LD1Host-AssociatedOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028467Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_07AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028469Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_07AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028470Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_15MAY2017_LD1Host-AssociatedOpen in IMG/M
3300028472Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_05JUN2017_LD1Host-AssociatedOpen in IMG/M
3300028523Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_05JUN2017_LD1Host-AssociatedOpen in IMG/M
3300028525Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_15MAY2017_LD1Host-AssociatedOpen in IMG/M
3300028526Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_07AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028527Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_07AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028529Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_05JUN2017_LD1Host-AssociatedOpen in IMG/M
3300032464Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032689Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_12JUL2016_LR2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300033530Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_28AUG2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0070690_10171067723300005330Switchgrass RhizosphereMHPILIFTMGQVRQQNGVKPPETRVLEVKYVVRNQRDVVEH
Ga0070666_1048675513300005335Switchgrass RhizosphereHLMHPILIFTMGQVRQRNGVKPPETRVLDVKYVVRNQTDVLEH*
Ga0068859_10255149313300005617Switchgrass RhizosphereVHLMHPILIFTMGQVGQRNGVKPPETRVLDVKYVVRNQTDI
Ga0068864_10198052713300005618Switchgrass RhizosphereMYLMHPILNFRMGQVRQRNGVKPLETRVLDIKYVVRNQTDVLEH
Ga0068864_10238371623300005618Switchgrass RhizosphereMHLMHPILIFTMGQVRQRNGVKPPETRVLDVKYVVRN
Ga0068863_10172170923300005841Switchgrass RhizosphereLHLMHPILNFRMGQVRQRNGVKPPETRVLDIKYVVRN
Ga0068863_10190460623300005841Switchgrass RhizosphereVHMMHPILIFTMGQVRQRNGVKPPETRVLDVKYMV
Ga0068863_10232678313300005841Switchgrass RhizosphereVHLMHSILIFTMGQVRQRNGVKPPETRVLDIKYVV
Ga0068858_10231015113300005842Switchgrass RhizosphereVHLMHPILNFTMGQVRQRNGVKPPETRVLDIKYVVRNQ
Ga0068860_10190282123300005843Switchgrass RhizosphereVHLMHPILIFTMGQVQQRNGVKPPETRVLDVKYVVRNQ
Ga0068860_10236551823300005843Switchgrass RhizosphereVHLMHPILIFTMGQVRQRNGMKPPETRVLDIKYVVRNQPD
Ga0068860_10243376113300005843Switchgrass RhizosphereVHSMHPILIFTMGQVWQRNGMKPPETRVLDVKYVVRNQTDI
Ga0134125_1271785013300010371Terrestrial SoilVHLIYPILIFTMGQVQQRNGVKPPETRVLDVKYVV
Ga0134127_1139540713300010399Terrestrial SoilHPILIFTMGQVRQRNGVKPPETRVLDVKYVVRNQTDVLEH*
Ga0163163_1199314313300014325Switchgrass RhizosphereVHLMHPILIFTMGQVRQRNGVKPPETRVLDVKYVVRNQTD
Ga0182100_108160513300015280Switchgrass PhyllosphereVHLMHPILIFTMGQVRQRNGVKPPKTRVFDLKLWIGH
Ga0182101_107242413300015284Switchgrass PhyllosphereVHLMHPILIFTMGQVRQRNGVKPHKTRVLNVKYVVRNQ
Ga0182162_107177923300015310Switchgrass PhyllosphereMHPILIFTMGHVRQRNGVKPPETRVLEVKYVVRNQRDVVEHRNGV
Ga0182162_109676813300015310Switchgrass PhyllosphereMHPILIFTMGQVRQRNGVKPPETRVLDVKYVVRNQTDVLEH
Ga0182162_110250713300015310Switchgrass PhyllosphereVHLMHPILIFTMGQVRQRNGVKPPETRVLEIKYVVRNQSD
Ga0182162_111658713300015310Switchgrass PhyllosphereVHLMYPILIFTMGQVWQRNGVKPPETRVLDVKYVVRNQTD
Ga0182162_112083113300015310Switchgrass PhyllosphereMHLMHPILNFRMGQVRQRNGVKPPETRVSDIKYVVRNQTD
Ga0182182_103871223300015311Switchgrass PhyllosphereRHKLVHLMHLILIFTMGQVRQRNGVKPPETRVLDVKYVMRNQTDV*
Ga0182182_108742913300015311Switchgrass PhyllosphereVHLMRPILIFTMGQVRQLNGVKPPETRVLDVKYVVRNQTD
Ga0182182_112168613300015311Switchgrass PhyllosphereVHLKHPILIFTMGQVRQRSGVKPLETRVLDVKYVVR
Ga0182120_110785513300015315Switchgrass PhyllosphereMHLMHPILNFTMGQVRQRNGVKPPETRVLDIKYVVRNQTDVV
Ga0182121_112804723300015316Switchgrass PhyllosphereVHLMHPILIFKMGQVRQRNGVKPPETRVLDIKYVVRN
Ga0182136_107083323300015317Switchgrass PhyllosphereMHPILIFTMGHVRQRNGVKPPETRVLEVKYVVRNQRDVVEHR
Ga0182181_110058713300015318Switchgrass PhyllosphereMHLMHPILIFTMGQVRQRNSVKPPETRDLDVKYVV
Ga0182114_113176513300015327Switchgrass PhyllosphereVHLMHSILIFTMGQVRQRNGVKPPETRVLEVKYAVRNQRNV
Ga0182114_113702213300015327Switchgrass PhyllosphereMYLMHPILNFRMGQVRQRNGVKPLETRVLDIKYVVRNQT
Ga0182135_112683433300015329Switchgrass PhyllosphereVHLMHPILIFTMGQVQQRNGMKPPETRVLDVKYVVRNQTDVLE
Ga0182117_100718823300015332Switchgrass PhyllosphereVHLMQPILIFTMAQVRQRNGMKLPETRVLDVKYVV*
Ga0182117_115160013300015332Switchgrass PhyllosphereVHLMHPILNFRMGQVRQRNGVKPPETRVLDIKYVVRNQTDV
Ga0182132_106894923300015334Switchgrass PhyllosphereMHPILIFTMGQVRQRNGVKPPETRVLDVKYVVRNH
Ga0182132_116978823300015334Switchgrass PhyllosphereVHLMHSILIFTMGQVRQRNGVKPPETRVLDVKYVVRNQTDVLE
Ga0182150_114474213300015336Switchgrass PhyllosphereVHSMHPILIFTMGQVWQRNGMKPPETRVLDVKYVVR
Ga0182151_113913513300015337Switchgrass PhyllosphereMHLMHPILNFTMGQVRQRNGVKPPETRVLDIKYVVRNQT
Ga0182137_107741413300015338Switchgrass PhyllosphereMHPILIFTMGQVRQRNGVKPPKTRILDVKYVVRNQTNVV
Ga0182133_113194113300015340Switchgrass PhyllosphereVHLMHPILIFTMGQVQQRNGVKPPETRVLDVKYVV
Ga0182133_117604413300015340Switchgrass PhyllosphereVHLMHPILNFTMGQVRQRNGVKPPETRVLDIKYVVRNQTDV
Ga0182115_119543213300015348Switchgrass PhyllosphereMHPILIFTMGQVRQRNGVKPPETRVLDIKYVVRNQPDVLEH*
Ga0182115_123992513300015348Switchgrass PhyllosphereIFTMGQVRQRNGVKPPETRVLDVKYVVRNQTDVLEH*
Ga0182185_119910213300015349Switchgrass PhyllosphereVHLMHPIFIFTMGQVRQRNGVKPPETRVIDVKYVVRNQTDVLEH
Ga0182185_123115313300015349Switchgrass PhyllosphereMRPILIFTMGQVRQRNGVKQPETRVLEVKYVVRNQRDVVEH
Ga0182169_120477023300015352Switchgrass PhyllosphereMHPMLIFTMGQVRQRNGVKPLETRVLDIKYVVQNQMDILE
Ga0182179_111005123300015353Switchgrass PhyllosphereMHLMHPILIFTMGQVRQRNGVKPPETRILDVNYVVRN
Ga0182179_119925913300015353Switchgrass PhyllosphereVHLMHPILIFTMGQVWQRNGVKPPETRVLDIKYVVRNQTDVLEHRN
Ga0182179_130521113300015353Switchgrass PhyllosphereMHLMHPILIFTMGQVRQRNGVKPPETRVLEVKYVVRNQRDV
Ga0182167_131014713300015354Switchgrass PhyllosphereVHLMHPILIFIMGQVWQRNGVKPPETRVLDIKYVVRNQTDVVEQ
Ga0182167_136767913300015354Switchgrass PhyllosphereMRLMHPILIFTMGQVRQRNGVKPPETRVLDVKYGVRNQM
Ga0182195_115923813300017414Switchgrass PhyllosphereVHLMHLILIFTMGQVRQRNGVKPPETRVLDVKYVV
Ga0182201_105510113300017422Switchgrass PhyllosphereMHPILIFTLGQVRQRNGVKPPETQVLDVKYVVRNQMNVV
Ga0182194_102445613300017435Switchgrass PhyllosphereVHLMHPILIFTMGHVRQRNGVKPPETRVLDIKYVVRNQPDVLEH
Ga0182194_110727413300017435Switchgrass PhyllosphereVHMMHPILIFTMGQVRQRNGVKPPETRVLDVKYMVRNQ
Ga0182200_107859223300017439Switchgrass PhyllosphereMHPILIFTKGQVRQXNGVKPPETRVLDVKYVVRNQTDILE
Ga0182200_114445913300017439Switchgrass PhyllosphereVHLMHPILIFTMGQVRQRNGVKPPKTRNLDVKYVVRNQTDIV
Ga0182200_115661613300017439Switchgrass PhyllosphereMYLMHPILNFRMGQVRQRNGVKPLETRVLDIKYVVR
Ga0182212_106842313300017691Switchgrass PhyllosphereHPILIFTMGQVRQRNGVKPPETRVLDIKYVVRNQPDVLEH
Ga0182210_113751513300017692Switchgrass PhyllosphereVHLMHPILIFTMGQVRQRNGVKPPETRVLDVKYVVRNQTDIL
Ga0182216_113094613300017693Switchgrass PhyllosphereMHLILIFTMGHVRQRNGVKPPKTRVLDVKYVVRNQTDILEHQ
Ga0182211_104647213300017694Switchgrass PhyllosphereRHKLVHLMNPILIFTMGQVWQRNGMKPPETRVFEVKYVVRNKTDHV
Ga0207701_1099438813300025930Corn, Switchgrass And Miscanthus RhizosphereVHLMHPILIFTMGQVRQRNGVKPPKTRVLDVKYVVRNQTDV
Ga0207644_1090111113300025931Switchgrass RhizosphereMHLMHPIQIFTMGQVRQRNDMKRPETRILDVKYVVRNQTDV
Ga0268322_100889713300028049PhyllosphereVHLMHPILIFTMGQVHQQNGMKPPETRVLDVKFVVRNQMGVLEH
Ga0268322_101034423300028049PhyllosphereIFTMGQVRQRNGVKPPETRVLDVKYVVRNQTDILEH
Ga0268306_100019413300028054PhyllosphereVHLMHPILIFTMGQVRQRNGVKPPETRVLDVKYVVRNHMDILE
Ga0268306_100544413300028054PhyllosphereVHLMHPILIFTMGQVRQRNGVKPPETRVLEVKYVVRNRRDVVE
Ga0268306_102444413300028054PhyllosphereMHLMHPILIFTMGQVRQRNGVKPPETRILDVNYVVRNQM
Ga0268330_101777813300028056PhyllosphereLMHPILIFTMGQVRQRNGVKPPETRVLDVKYVVRNQTDVLEH
Ga0268330_102924413300028056PhyllosphereMHLMHPILIFTMGQVRQRNGVKPPKTRILDIKYVVRNQTDV
Ga0268330_103766313300028056PhyllosphereVHLMHPILIFTMGQVRQRNGVKPPETRVLDIKYVVRN
Ga0268330_103817313300028056PhyllosphereMHLMHPILIFTMGQVRQRNGVKPPETRVLDVKYVVRNQTDVL
Ga0268330_104239113300028056PhyllosphereVHLMHPILIFTMGQVRQRNGVKPPETRVLEAKYVVRNQRD
Ga0268330_106142513300028056PhyllosphereVHLMHPILIFTMGQVHQQNGMKPPETRVLDVKFVVR
Ga0268352_104104813300028057PhyllosphereVHLMHPILIFTMGQVRQRNGVKPPETRVLDAKYVV
Ga0268352_104161113300028057PhyllospherePILIFTMGQVRQRNGVKPPETRVLDVKYVVRNQTDVLEH
Ga0268332_105039513300028058PhyllosphereVHMMHPILIFTMGQVRQQNSVKPPETRVLEVKYVVRNQRDV
Ga0268332_106318713300028058PhyllosphereVHLIHPILIFTMGQVRQRNGVKPPETRVLDLKYVVQNQ
Ga0268332_107227613300028058PhyllosphereVHLMHPILIFTMGQVRQRNAVKPPETRVLDVKYVVRNQTDIV
Ga0268340_103706613300028064PhyllosphereVHLMRPILIFTMGQVRQLNGVKPPETRVLEVKYVVRNQRDV
Ga0268355_100399113300028139PhyllosphereMHPILIFTMGQVHQQNGMKPPETRVLDVKFVVRNQMDI
Ga0268326_100857013300028141PhyllosphereVHLMHPILIFTMGQVRQRNGVKPPETRVLDVKYVVRNQTDV
Ga0268347_101934213300028142PhyllosphereVHLMHPILIFTMGQVRQRNGVKPPETRVLDIKYVVQNQTD
Ga0268347_102793313300028142PhyllosphereMHLMHPILIFTMGQVRQRNGVKPPKTRILDVNYVV
Ga0268347_103135713300028142PhyllosphereVHLIHPILNFRMGQVRQRNGVKPPETRVLDIKYVVRN
Ga0268348_100768613300028143PhyllosphereMRLMHPILIFTMGQVRQRNGVKPPETRVLDIKYVVRNQTDVLEHR
Ga0268308_102685613300028151PhyllospherePILIFTMGLVRQQNGVKPAETRILDVNYVVRNQTDIVEH
Ga0268341_100796213300028154PhyllosphereVHLMHPIFIFTMGQVRQRNGVKPPETRVLDVKYVVRNQT
Ga0268316_102324013300028253PhyllosphereMHLMHPILNFRMGQVRQRNGVKPPETRVSDIKYVVRNQTDIVE
Ga0268304_100020463300028256PhyllosphereVHLMHLILIFTMGQVRQRNGVKPPETRVLNIKYVVRNQP
Ga0268304_100034323300028256PhyllosphereVHLMHPLLIFTMGQVRQRNGVKPPETRVLDVKYVVRNQT
Ga0268310_100841713300028262PhyllosphereVHLMHPILIFTMGHVRQRNGVKQPETRILDVKYVLRNQTDV
Ga0268310_100922713300028262PhyllosphereVHLMHLILIFTMGQVWQRNGVKPPETRVLDVKYVVQNQTYVVE
Ga0268310_101090423300028262PhyllosphereVHLMHPILIFTMGQVRQRNGVKPHETRVLDVKYVVRNQTDILEH
Ga0268310_101652213300028262PhyllosphereVHLMHPILNFTMGQVRQRNGVKPPETRVLDIKYVVRNQTDVVDHR
Ga0268266_1099681013300028379Switchgrass RhizosphereMNPILIFTMGQVWQRNGMKPPETRVFEVKYVVRNKTDH
Ga0268333_101014113300028467PhyllosphereVHLMHPILIFTMGQVWQRNCVKPPETRVLDVKYVVRNQTDILEHRN
Ga0268337_101052413300028469PhyllosphereVHLMHLILIFTMGQVRQRNGVKPPETRVLDVKYVMRNQMDV
Ga0268307_100983023300028470PhyllosphereLMHLMHPILIFTMGQVRQRNGVKPPETRVLDVKYVVRNQTDVLEH
Ga0268307_101886923300028470PhyllosphereVHLMHLILIFTMDQVRQRNGVKPPETRVLDIKYVVRNQ
Ga0268315_101061123300028472PhyllosphereMHLMHPILNFRMGQVRQGNGVKPSETRVLDIKYVVRNQ
Ga0268313_100061723300028523PhyllosphereVHLMHPILIFTMGQARQRNGVKPPETRVLDIKYVVRNQPDVLEH
Ga0268305_10356613300028525PhyllosphereMHLMHPILIFTMGQVRQRNGVKPPETRVLDVKYVVR
Ga0268339_101536313300028526PhyllosphereVHLMHPILIFPMGQVRQRSDVKPPETQVLDVKYVV
Ga0268335_101745013300028527PhyllosphereMRLMHPILIFTMGQVRQRNGVKPPETRVLDVKYGVRNQMDVLE
Ga0268311_102634013300028529PhyllosphereVHLMHPILIFTMGQVRQRNGVKPPETRVLDVKYVVRNQT
Ga0214492_103202613300032464Switchgrass PhyllosphereVHLMHPILIFTMGHVRQRNGVKPPETRVLDIKYVVRN
Ga0214497_110150113300032689Switchgrass PhyllosphereVHLMHPILIFIMGQVRQRNGVKRPETRILDEKFVVR
Ga0314760_118635613300033530Switchgrass PhyllosphereVHLMHPILIFTMGQVRQRNGVKPPETRVLDIKYVVRNQP

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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