Metagenome Family F086429

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086429
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	46 residues
Representative Sequence	MREAVFDGPADAADALDASLDHLAAVDWASLGTAAHGEMLARLQR
Number of Associated Samples	76
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	96.26 %
% of genes near scaffold ends (potentially truncated)	95.45 %
% of genes from short scaffolds (< 2000 bps)	77.27 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (64.545 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (60.909 % of family members)
Environment Ontology (ENVO)	Unclassified (79.091 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (60.909 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.21% β-sheet: 0.00% Coil/Unstructured: 54.79%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF13561	adh_short_C2	11.82
PF00583	Acetyltransf_1	6.36
PF08922	DUF1905	6.36
PF00753	Lactamase_B	5.45
PF08281	Sigma70_r4_2	4.55
PF11391	DUF2798	3.64
PF13556	HTH_30	1.82
PF01636	APH	1.82
PF01638	HxlR	1.82
PF04909	Amidohydro_2	1.82
PF01070	FMN_dh	1.82
PF03466	LysR_substrate	1.82
PF00106	adh_short	0.91
PF04851	ResIII	0.91
PF04075	F420H2_quin_red	0.91
PF00282	Pyridoxal_deC	0.91
PF00903	Glyoxalase	0.91
PF02771	Acyl-CoA_dh_N	0.91
PF10094	DUF2332	0.91
PF01717	Meth_synt_2	0.91
PF02803	Thiolase_C	0.91
PF06500	FrsA-like	0.91
PF01799	Fer2_2	0.91
PF02687	FtsX	0.91
PF13365	Trypsin_2	0.91
PF13411	MerR_1	0.91
PF13490	zf-HC2	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	1.82
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	1.82
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.82
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	0.91
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.91
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	0.91
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.55 %
Unclassified	root	N/A	35.45 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.55 %
Unclassified	root	N/A	35.45 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.55 %
Unclassified	root	N/A	35.45 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	58.18 %
Unclassified	root	N/A	35.45 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	57.27 %
Unclassified	root	N/A	35.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.45 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	30.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.45 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	4.55 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	3.64 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	2.73 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.82 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.45 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	4.55 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	3.64 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	2.73 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.82 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.45 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	4.55 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.73 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	1.82 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.82 %
Hamadaea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Hamadaea	0.91 %
Rhodococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus	0.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.45 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	4.55 %
Streptomyces samsunensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces samsunensis	1.82 %
unclassified Nocardia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → unclassified Nocardia	1.82 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.82 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.91 %
Rhodococcus oryzae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus oryzae	0.91 %
Hamadaea tsunoensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Hamadaea → Hamadaea tsunoensis	0.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.45 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	4.55 %
Nocardia sp. NRRL S-836	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → unclassified Nocardia → Nocardia sp. NRRL S-836	1.82 %
Streptomyces samsunensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces samsunensis	1.82 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.82 %
Streptomyces sp. 8L	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. 8L	0.91 %
Rhodococcus oryzae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus oryzae	0.91 %
Hamadaea tsunoensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Hamadaea → Hamadaea tsunoensis	0.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004152\|Ga0062386_101319388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces samsunensis	600	Open in IMG/M
3300005332\|Ga0066388_100582462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1744	Open in IMG/M
3300010048\|Ga0126373_12322410	Not Available	597	Open in IMG/M
3300010048\|Ga0126373_12691822	Not Available	555	Open in IMG/M
3300010361\|Ga0126378_10872647	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300010366\|Ga0126379_10905409	Not Available	985	Open in IMG/M
3300010373\|Ga0134128_12356052	Not Available	587	Open in IMG/M
3300010373\|Ga0134128_12671771	Not Available	550	Open in IMG/M
3300010376\|Ga0126381_100043732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5442	Open in IMG/M
3300010376\|Ga0126381_100113994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3483	Open in IMG/M
3300010376\|Ga0126381_104545349	Not Available	535	Open in IMG/M
3300010396\|Ga0134126_11312326	Not Available	801	Open in IMG/M
3300010396\|Ga0134126_11598183	Not Available	717	Open in IMG/M
3300010396\|Ga0134126_12348065	Not Available	581	Open in IMG/M
3300012209\|Ga0137379_11028335	Not Available	729	Open in IMG/M
3300016270\|Ga0182036_10213412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1423	Open in IMG/M
3300016319\|Ga0182033_10245503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1451	Open in IMG/M
3300016319\|Ga0182033_12056326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	521	Open in IMG/M
3300016341\|Ga0182035_10966913	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300016357\|Ga0182032_11218358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → unclassified Nocardia → Nocardia sp. NRRL S-836	648	Open in IMG/M
3300016387\|Ga0182040_10071742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2247	Open in IMG/M
3300016387\|Ga0182040_10245208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Hamadaea → Hamadaea tsunoensis	1343	Open in IMG/M
3300016387\|Ga0182040_10350967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1144	Open in IMG/M
3300016404\|Ga0182037_11950040	Not Available	526	Open in IMG/M
3300017822\|Ga0187802_10337999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces samsunensis	590	Open in IMG/M
3300017926\|Ga0187807_1126526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	811	Open in IMG/M
3300021170\|Ga0210400_11072760	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300025929\|Ga0207664_11530767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	589	Open in IMG/M
3300027812\|Ga0209656_10003726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9854	Open in IMG/M
3300027812\|Ga0209656_10104278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1485	Open in IMG/M
3300031544\|Ga0318534_10285030	Not Available	952	Open in IMG/M
3300031545\|Ga0318541_10358184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	815	Open in IMG/M
3300031546\|Ga0318538_10067130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1793	Open in IMG/M
3300031549\|Ga0318571_10184719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	738	Open in IMG/M
3300031561\|Ga0318528_10341136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	804	Open in IMG/M
3300031564\|Ga0318573_10094554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1527	Open in IMG/M
3300031564\|Ga0318573_10647864	Not Available	568	Open in IMG/M
3300031572\|Ga0318515_10017377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3351	Open in IMG/M
3300031572\|Ga0318515_10169855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1165	Open in IMG/M
3300031573\|Ga0310915_10278353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1180	Open in IMG/M
3300031640\|Ga0318555_10092226	All Organisms → cellular organisms → Bacteria	1589	Open in IMG/M
3300031640\|Ga0318555_10373107	Not Available	773	Open in IMG/M
3300031679\|Ga0318561_10421432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	734	Open in IMG/M
3300031680\|Ga0318574_10012447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	3921	Open in IMG/M
3300031681\|Ga0318572_10031295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2769	Open in IMG/M
3300031682\|Ga0318560_10075652	All Organisms → cellular organisms → Bacteria	1707	Open in IMG/M
3300031682\|Ga0318560_10458827	Not Available	690	Open in IMG/M
3300031713\|Ga0318496_10301694	Not Available	884	Open in IMG/M
3300031719\|Ga0306917_10063210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2538	Open in IMG/M
3300031747\|Ga0318502_10193881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1173	Open in IMG/M
3300031751\|Ga0318494_10004008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6467	Open in IMG/M
3300031764\|Ga0318535_10010349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	3304	Open in IMG/M
3300031764\|Ga0318535_10206269	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300031765\|Ga0318554_10028510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2978	Open in IMG/M
3300031768\|Ga0318509_10598070	Not Available	614	Open in IMG/M
3300031769\|Ga0318526_10057008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1502	Open in IMG/M
3300031769\|Ga0318526_10161713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	912	Open in IMG/M
3300031769\|Ga0318526_10301739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	655	Open in IMG/M
3300031778\|Ga0318498_10212651	Not Available	876	Open in IMG/M
3300031778\|Ga0318498_10405615	Not Available	606	Open in IMG/M
3300031779\|Ga0318566_10007602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	4319	Open in IMG/M
3300031779\|Ga0318566_10042466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2137	Open in IMG/M
3300031781\|Ga0318547_10442219	Not Available	800	Open in IMG/M
3300031792\|Ga0318529_10139764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1110	Open in IMG/M
3300031794\|Ga0318503_10094567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	946	Open in IMG/M
3300031794\|Ga0318503_10235642	Not Available	594	Open in IMG/M
3300031795\|Ga0318557_10345866	Not Available	683	Open in IMG/M
3300031796\|Ga0318576_10095733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1350	Open in IMG/M
3300031798\|Ga0318523_10411543	Not Available	672	Open in IMG/M
3300031799\|Ga0318565_10018282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	3040	Open in IMG/M
3300031799\|Ga0318565_10024409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2685	Open in IMG/M
3300031799\|Ga0318565_10305935	Not Available	772	Open in IMG/M
3300031819\|Ga0318568_10684231	Not Available	638	Open in IMG/M
3300031833\|Ga0310917_11086819	Not Available	534	Open in IMG/M
3300031835\|Ga0318517_10153000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1031	Open in IMG/M
3300031835\|Ga0318517_10374810	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300031880\|Ga0318544_10339741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	583	Open in IMG/M
3300031890\|Ga0306925_10006080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11183	Open in IMG/M
3300031890\|Ga0306925_11109948	Not Available	799	Open in IMG/M
3300031890\|Ga0306925_12016313	Not Available	544	Open in IMG/M
3300031893\|Ga0318536_10173109	Not Available	1098	Open in IMG/M
3300031893\|Ga0318536_10349729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	748	Open in IMG/M
3300031894\|Ga0318522_10105177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1047	Open in IMG/M
3300031894\|Ga0318522_10232931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	698	Open in IMG/M
3300031897\|Ga0318520_10651964	Not Available	656	Open in IMG/M
3300031912\|Ga0306921_10760156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1110	Open in IMG/M
3300031942\|Ga0310916_10136132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	2014	Open in IMG/M
3300031946\|Ga0310910_10760950	Not Available	764	Open in IMG/M
3300031954\|Ga0306926_10764132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1167	Open in IMG/M
3300032001\|Ga0306922_11188832	Not Available	777	Open in IMG/M
3300032008\|Ga0318562_10071380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1937	Open in IMG/M
3300032008\|Ga0318562_10225335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1087	Open in IMG/M
3300032008\|Ga0318562_10306245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	923	Open in IMG/M
3300032009\|Ga0318563_10018966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3334	Open in IMG/M
3300032041\|Ga0318549_10274805	Not Available	759	Open in IMG/M
3300032051\|Ga0318532_10191746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → unclassified Nocardia → Nocardia sp. NRRL S-836	726	Open in IMG/M
3300032055\|Ga0318575_10426468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. 8L	673	Open in IMG/M
3300032060\|Ga0318505_10127938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1167	Open in IMG/M
3300032065\|Ga0318513_10469963	Not Available	615	Open in IMG/M
3300032066\|Ga0318514_10728353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus oryzae	527	Open in IMG/M
3300032068\|Ga0318553_10006839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4810	Open in IMG/M
3300032076\|Ga0306924_10136906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2797	Open in IMG/M
3300032076\|Ga0306924_10234959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2105	Open in IMG/M
3300032091\|Ga0318577_10310842	All Organisms → cellular organisms → Bacteria → Terrabacteria group	754	Open in IMG/M
3300032261\|Ga0306920_100038722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	6879	Open in IMG/M
3300032261\|Ga0306920_102735114	Not Available	673	Open in IMG/M
3300032261\|Ga0306920_104439575	Not Available	502	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.45%
Aquatic	Environmental → Aquatic	4.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.45%
Freshwater	Environmental → Aquatic → Freshwater	4.55%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	92.73%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.55%
Loam	Environmental → Terrestrial → Soil → Loam	1.82%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.91%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	80.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.73%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.73%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.82%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	60.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.27%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.55%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.73%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062386_1013193881	3300004152	Bog Forest Soil	VPETGFGSAAEAAGMLDASLDYLAATDWASLGTQAHGEMLARLQRAQAQLTAVN
Ga0066388_1005824622	3300005332	Tropical Forest Soil	MGAAAFGSAGEAADMLDASLDHLAATDWTALGTSAHAEMLVRLSRARRSSLR*
Ga0126373_123224101	3300010048	Tropical Forest Soil	MPEALFASTADAAGMLDASLDHLVATDWSSLGTAAHAQMLTQLQRAQAKLTAV
Ga0126373_126918222	3300010048	Tropical Forest Soil	MREAGSGSVSGAADALDAALDHLAAVDWASLGTQAHGELLARLGRVQTRLTAVHAAVLS
Ga0126378_108726472	3300010361	Tropical Forest Soil	MGAAAFGSAGEAADMLDASLDHLAATDWTALGTSAHAEMLVRLSRARRSSPR*
Ga0126379_106505611	3300010366	Tropical Forest Soil	VIQVQAAVFGSTGEAADWLDASLEHLAATDWAALGTTAHAEMLARLSCAQT*
Ga0126379_109054091	3300010366	Tropical Forest Soil	VIQLREARFGSAADAAALLDASLDHLATTDWASLGTQAHGEMLAL
Ga0134128_123560521	3300010373	Terrestrial Soil	MPEALFASPADAAGMLGASLDHLAATDWASLGTGAHGQMLALLQRAQ
Ga0134128_126717711	3300010373	Terrestrial Soil	VEVIQMPEALFASPADAAAMLGASLDHLAATDWASLGT
Ga0126381_1000437321	3300010376	Tropical Forest Soil	MREAVSGGPADAAGALDASLDHLAAVDWASLGTAAHAEM
Ga0126381_1001139946	3300010376	Tropical Forest Soil	VIQVPETAFASPAGAAGALDASLDHLAATDWASLGTAAHGEMLARLQRA
Ga0126381_1045453491	3300010376	Tropical Forest Soil	VIQVQAAVFTSAGEAAGMLDASLDHLAATDWASLGTVA
Ga0134126_113123262	3300010396	Terrestrial Soil	MPEALFASPADAAGMLGASLDHLAATDWASLGTGAHGQMLAQLQRAQ
Ga0134126_115981831	3300010396	Terrestrial Soil	MPEALFASPAEAAAMLEASLDHLAGTDWASLGTAAHGQML
Ga0134126_123480651	3300010396	Terrestrial Soil	MPEALFASPAEAASMLGASLDHLAGTDWASLGTAAHGQMLAQL
Ga0137379_110283351	3300012209	Vadose Zone Soil	VIQVREAGFGSAADAAGMLEASLDHLAATDWASLGTQAHGEMLARLQRAQARLTAVNAAVLA
Ga0182036_102134123	3300016270	Soil	VREAVFDGPADAADALDASLDHLAAVDWASLGTAAHGEML
Ga0182033_102455031	3300016319	Soil	VPETVFASPAGAADALDAALDHLAAVDWASLGTAAHAEMLARLQRA
Ga0182033_120563262	3300016319	Soil	MPDTAFASPAAAADSLDASLDHLAAVDWASLGTAAHGEMLARL
Ga0182035_109669132	3300016341	Soil	MQAADFASAGEAADMLDASLDHLAATDWTALGTAAHAEMLVRLSRAQTKL
Ga0182032_112183582	3300016357	Soil	MPDTAFASPAAAADSLDASLDHLAAVDWASLGTAAHG
Ga0182040_100717424	3300016387	Soil	MPDTAFASPAAAADSLDASLDHLAAVDWASLGTAAHGEMLARLQR
Ga0182040_102452083	3300016387	Soil	MPDATFGSAAEAADALDASLDHLAAVDWASLGTAAHAEMLARLQRAQ
Ga0182040_103509673	3300016387	Soil	VQAAVFGSADQAADWLDASLDHLAATDWAPLGTAAHAEILARLSRAQ
Ga0182037_119500402	3300016404	Soil	MPEMAFASAAEAAGALDASLDHLAAVDWPSLGTAAHGE
Ga0187802_103379991	3300017822	Freshwater Sediment	VIQVPGTAIGSAAEAAGLLDASLDYLAATDWASLGTQAHGEMLAQLQ
Ga0187807_11265263	3300017926	Freshwater Sediment	MCEAFGSAAEAAGMLDASLDHLAAMDWASLGTGAHGEMLARLQRTYAK
Ga0210400_110727602	3300021170	Soil	VPETGFGSVADAAGQLEASLDYLAATDWASLGTQAHGEMLA
Ga0207664_115307672	3300025929	Agricultural Soil	VPGTAIGSAAEAAGLLDASLDYLAATDWASLGTQAHGEMLA
Ga0209656_100037261	3300027812	Bog Forest Soil	MPGAGFANAAEAAGMLDASLDHLAAVDWASLGTQAHGEMLAQLQRAQAKLTVV
Ga0209656_101042781	3300027812	Bog Forest Soil	MRETAFGNPAEAAGMLDASLDHLAAVDWASLGTQAHGEMLAQLQRAQAKLTVVN
Ga0318534_102850301	3300031544	Soil	MPEAAFASAAEATGMLDASLGYLAGVDWAPLGTQAHGEMLARLQRAQAKLT
Ga0318541_103581841	3300031545	Soil	MPDATFGSAAEAADALDASLDHLAATDWASLGTAAHA
Ga0318538_100671301	3300031546	Soil	MREAVFDGPADAADALDASLDHLAAVDWASLGTAAHGEMLGRLQRAQ
Ga0318571_101847191	3300031549	Soil	MPDATFGSAAEAADALDASLDHLAAVDWASLGTAAHGEMLARLQRAQAKLT
Ga0318528_103411362	3300031561	Soil	VPETVFASPAGAADALDAALDHLAAVDWASLGTAAHAEMLA
Ga0318573_100945541	3300031564	Soil	VPETVFASPAGAADALDAALDHLAAVDWASLGTAAHAEMLARLQRAQ
Ga0318573_106478642	3300031564	Soil	MPEAAFAGAADAAGMLDASLDHLAAVDWASLGTAAHGEMLARLQRAQARL
Ga0318515_100173771	3300031572	Soil	MPDATFGSAAEAADALDASLDHLAAVDWASLGTAAH
Ga0318515_101698551	3300031572	Soil	MPEAAFASAAEATGMLDASLGYLAGVDWASLGTQAHGEMLGQLQ
Ga0310915_102783531	3300031573	Soil	MREAVFDGPAEAADALDASLDHLAAVDWASLGTAAHAEMLA
Ga0318555_100922263	3300031640	Soil	MPDTAFASAAEAAGALDASLDHLAAVDWASLGTQAHGEMLARLQRAQAKLTAVHA
Ga0318555_103731071	3300031640	Soil	VPDMAFAGAADAAGMLDASLDHLAAVDWPSLGTAAHG
Ga0318561_104214321	3300031679	Soil	VPETVFASPAGAADALDAALDHLAAVDWASLGTAAHAEMLARLQRAQAKLT
Ga0318574_100124471	3300031680	Soil	MPGATFASPAAAADSLDASLDHLAGVDWASLGTAAHAEMLA
Ga0318572_100312954	3300031681	Soil	MREAVFDGPADAADALDASLDHLAAVDWASLGTAA
Ga0318560_100756523	3300031682	Soil	VPETVFASPAGAADALDAALDHLAAVDWASLGTAAHAEMLARLQRAQAK
Ga0318560_104588271	3300031682	Soil	MPEAAFASAAEATGMLDASLGYLAGVDWAPLGTQAHGEMLGRLQRAQAKLTAVHA
Ga0318496_103016941	3300031713	Soil	VPEMAFAGVADAAGALDASLDHLAAVDWAPLGTAAHGEMLARLQRAQAKLTAVHAAVL
Ga0306917_100632104	3300031719	Soil	MREAVFDGPADAADALDASLDHLAAVDWASLGTAAHAE
Ga0318502_101938812	3300031747	Soil	VPETVFASPAGAADALDAALDHLAAVDWASLGTAAH
Ga0318494_100040088	3300031751	Soil	MPDATFGSAAEAADALDASLDHLAAVDWASLGTAAHGQMLARLQRAQ
Ga0318535_100103495	3300031764	Soil	MREAVFDGPADAADALDASLDHLAAVDWASLGTAAH
Ga0318535_102062692	3300031764	Soil	MQAAEFASAGEAADMLDASLDHLAATEWTALGTAAHAEMLVRLSRAQTKLTAVPIG
Ga0318554_100285104	3300031765	Soil	MREAVFDGPADAADALDASLDHLAAVDWASLGTAAHGQMLARLQ
Ga0318509_105980701	3300031768	Soil	MPDATFGSAAEAADALDASLDHLAATDWASLGTAAHAEMLA
Ga0318526_100570083	3300031769	Soil	VREAVFDGPADAADALDASLDHLAAVDWASLGTAAHAEMLAR
Ga0318526_101617131	3300031769	Soil	MPEALFASAAGAADALDASLDHLAAVDWASLGTQAHGEM
Ga0318526_103017391	3300031769	Soil	VPETVFASPAGAADALDAALDHLAAVDWASLGTAAHAEMLAR
Ga0318498_102126511	3300031778	Soil	MPEAAFAGAADAAGMLDASLDHLAPVDWASLGTAAHG
Ga0318498_104056151	3300031778	Soil	MPEAAFASAAEATGMLDASLGYLAGVDWAPLGTQAHGEMLGR
Ga0318566_100076021	3300031779	Soil	MREAVFDGPADAADALDASLDHLAAVDWASLGTAAHAEML
Ga0318566_100424661	3300031779	Soil	MREAVFDGPADAADALDASLDHLAAVDWASLGTAAHGQMLGRLQRAQARLTAASAAVLS
Ga0318547_104422192	3300031781	Soil	MREAVFDGPADAADALDASLDHLAAVDWASLGTAAHG
Ga0318529_101397642	3300031792	Soil	VREAVFDGPADAADALDASLDHLAAVDWASLGTAAHAEMLARLQRA
Ga0318503_100945673	3300031794	Soil	MREAVFDGPADAADALDASLDHLVAVDWASLGTAAHAEMLARLQRAQAR
Ga0318503_102356421	3300031794	Soil	MREAVFDGPADAADALDASLDHLAAVDWASLGTAAHGEMLGRLQRAQAR
Ga0318557_103458662	3300031795	Soil	MREAVFDGPADAADALDASLDHLAAVDWASLGTAAHGEM
Ga0318576_100957331	3300031796	Soil	MREAVFDGPAEAADALDASLDHLAAVDWASLGTAAHGQMLARLQRAQAKLTAA
Ga0318523_104115432	3300031798	Soil	MPEALFASAAGAADALDASLDHLAAVDWASLGTQAHGEMLARLQ
Ga0318565_100182821	3300031799	Soil	MREAVFDGPADAADALDASLDHLAAVDWASLGTAAHAEMLARLQRAQAKLTAA
Ga0318565_100244094	3300031799	Soil	MPDATFGSAAEAADALDASLDHLAAVDWASLGTAAHG
Ga0318565_103059352	3300031799	Soil	MPDATFSGAAEAADALDASLDHLAATDWASLGTAAHGEMLARLAAQ
Ga0318568_106842311	3300031819	Soil	MREAVFDGPADAAGMLDASLDHLAAVDWASLGTAAHGEMLARLQRAQAKLTAVH
Ga0310917_104560413	3300031833	Soil	VQAAVFGSAGEAADWLDASLEHLAATDWAALGTTAHAEMLARLSRAQTKL
Ga0310917_110868191	3300031833	Soil	MPEAAFASAAEATGMLDASLGYLAGVDWAPLGTAAHGEMLGQLQRAQAKLTAVHAAVLGA
Ga0318517_101530002	3300031835	Soil	MPDATFGSAAEAADALDASLDHLAAVDWASLGTAAHGQM
Ga0318517_103748102	3300031835	Soil	MQAADFASAGEAADMLDASLDHLAATDWMALGTAAHAEMLVRLSRAQTK
Ga0318544_103397411	3300031880	Soil	VPETVFASPAGAADALDAALDHLAAVDWASLGTAAHAEML
Ga0306925_100060801	3300031890	Soil	MPDATFGSAAEAADALDASLDHLAAVDWASLGTAAHAEMLARLQRAQA
Ga0306925_111099482	3300031890	Soil	MPDAFGSAAEAATTLGASLDHLATVDWASLGTAAHGEMLACLQRAQTKLTAVN
Ga0306925_120163131	3300031890	Soil	MPEAAFASAAEATGMLDASLGYLAGVDWAPLGTQAHGEMLAR
Ga0318536_101731092	3300031893	Soil	MREAVFDGPAEAADALDASLDHLAAVDWASLGTAAHGQMLARLQRAQAKLTAANAAF
Ga0318536_103497292	3300031893	Soil	VPETVFASPAGAADALDAALDHLAAVDWASLGTAAHAEM
Ga0318522_101051772	3300031894	Soil	MREAVFDGPADAADALDASLDHLAAVDWASLGTAAHAEMLARLQ
Ga0318522_102329311	3300031894	Soil	MPDATFGSAAEAADALDASLDHLAAVDWASLGTAAHAEMLG
Ga0318520_106519642	3300031897	Soil	VLEAAEMLDASLDRLAGVDWASLGTAAHGEMLACLQRAQTKLTAVNAAVSFVCA
Ga0306921_107601561	3300031912	Soil	VREAVFDGPADAADALDASLDHLAAVDWAPLGTAAHGEMLARLQRAQ
Ga0310916_101361324	3300031942	Soil	MREAVFDGPADAADALDASLDHLAAVDWASLGTAAHGEML
Ga0310910_107609501	3300031946	Soil	VREAVFDGPADAADALDASLDHLAAVDWASLGTAAHGEMLGRLQRAQ
Ga0306926_107641321	3300031954	Soil	VREAVFDGPADAADALDASLDHLAAVDWASLGTAAH
Ga0306922_111888322	3300032001	Soil	MREAGFGSAADAAAMLDASLDHLAATDWPSLGTQAHGEMLALLQRAQ
Ga0318562_100713802	3300032008	Soil	VPDMAFAGAADAAGMLDASLDHLAAVDWPSLGTAAHGEMLVRLQRAQAKLTAVH
Ga0318562_102253351	3300032008	Soil	MPDTAFASPAAAADSLDASLDHLAAVDWASLGTAAHGEM
Ga0318562_103062451	3300032008	Soil	MPEALFAGAAGAAGALDASLDHLAAVDWASLGTAAHGEM
Ga0318563_100189665	3300032009	Soil	MREAVFDGPADAADALDASLDHLAAVDWASLGTAAHAEM
Ga0318549_102748052	3300032041	Soil	MPEAAFASAAEATGMLDASLGYLAGVDWASLGTQAHGEMLGQLQRAQAKLTAVHA
Ga0318532_101917462	3300032051	Soil	MREAVFDGPADAADALDASLDHLAAVDWASLGTAAHGEMLG
Ga0318575_104264682	3300032055	Soil	MPDATFGSAAEAADALDASLDHLAAVDWASLGTAAHGEMLARLQRAQ
Ga0318505_101279382	3300032060	Soil	VREAVFDGPADAADALDASLDHLAAVDWASLGTAAHGEMLGRLQRAQAK
Ga0318513_104699631	3300032065	Soil	VPDMAFAGAADAAGMLDASLDHLATTDWPSLGTAAHGEMLARLQRAQARL
Ga0318514_107283532	3300032066	Soil	VREAVFDGPADAADALDASLDHLAAVDWAPLGTAAHGEMLARLQRAQAKLTAVHAAVL
Ga0318553_100068395	3300032068	Soil	MREAVFDGPADAADALDASLDHLAAVDWASLGTAAHGEMLGRLQRAQARLTAAS
Ga0306924_101369064	3300032076	Soil	MREAVFDGPADAADALDASLDHLAAVDWASLGTAAHGEMLARLQR
Ga0306924_102349593	3300032076	Soil	VREAVFDGPADAADALDASLDHLAAVDWASLGTAAHAEMLARLQRAQAKLTAV
Ga0318577_103108421	3300032091	Soil	MPDASFASPAAAADSLDASLDHLAGVDWASLGTAAHAEMLARLQRA
Ga0306920_1000387221	3300032261	Soil	MREAVFDGPADAADALDASLDHLAAVDWASLGTAAHGEMLAR
Ga0306920_1027351142	3300032261	Soil	VPEMAFAGVADAAGALDASLDHLAAVDWAPLGTAAHGEMLARLQRAQAK
Ga0306920_1044395752	3300032261	Soil	VLEAADMLDASLDHLAAVDWASLGTQAHGEMLVRLQRAQAKLTTVHAAVLS
Ga0335074_114651682	3300032895	Soil	MPAASASFASTGEAADWLDAALDHLAAADWASLGTAAHGEMLGRLQRAQAKL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F086429

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences