NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F086437

Metagenome / Metatranscriptome Family F086437

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Overview Alignments Structure & Topology Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F086437
Family Type Metagenome / Metatranscriptome
Number of Sequences 110
Average Sequence Length 65 residues
Representative Sequence MHRGLPSVVSIESVGLGSSESEFGTSVNSTVLAWASEKSPSGSWMSSYVPSASDVVSICNAIVGI
Number of Associated Samples 65
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 43.27 %
% of genes near scaffold ends (potentially truncated) 22.73 %
% of genes from short scaffolds (< 2000 bps) 94.55 %
Associated GOLD sequencing projects 64
AlphaFold2 3D model prediction Yes
3D model pTM-score0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (98.182 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere
(73.636 % of family members)
Environment Ontology (ENVO) Unclassified
(92.727 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant surface
(89.091 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 30.11%    β-sheet: 0.00%    Coil/Unstructured: 69.89%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.22
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A98.18 %
All OrganismsrootAll Organisms1.82 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005347|Ga0070668_102269596Not Available502Open in IMG/M
3300005843|Ga0068860_102035926Not Available596Open in IMG/M
3300005843|Ga0068860_102104014Not Available586Open in IMG/M
3300009981|Ga0105133_126086Not Available540Open in IMG/M
3300010399|Ga0134127_11918020Not Available670Open in IMG/M
3300010399|Ga0134127_13338712Not Available525Open in IMG/M
3300015270|Ga0182183_1009223Not Available988Open in IMG/M
3300015297|Ga0182104_1060341Not Available644Open in IMG/M
3300015301|Ga0182184_1032795Not Available734Open in IMG/M
3300015306|Ga0182180_1094977Not Available503Open in IMG/M
3300015309|Ga0182098_1018197Not Available948Open in IMG/M
3300015310|Ga0182162_1084378Not Available592Open in IMG/M
3300015310|Ga0182162_1084833Not Available590Open in IMG/M
3300015312|Ga0182168_1081564Not Available616Open in IMG/M
3300015312|Ga0182168_1112872Not Available543Open in IMG/M
3300015313|Ga0182164_1057562Not Available698Open in IMG/M
3300015313|Ga0182164_1082093Not Available614Open in IMG/M
3300015316|Ga0182121_1007389Not Available1390Open in IMG/M
3300015316|Ga0182121_1138109Not Available514Open in IMG/M
3300015317|Ga0182136_1072436Not Available649Open in IMG/M
3300015317|Ga0182136_1141444Not Available502Open in IMG/M
3300015324|Ga0182134_1049154Not Available760Open in IMG/M
3300015324|Ga0182134_1149420Not Available500Open in IMG/M
3300015327|Ga0182114_1045878Not Available821Open in IMG/M
3300015327|Ga0182114_1069602Not Available707Open in IMG/M
3300015327|Ga0182114_1075310Not Available686Open in IMG/M
3300015328|Ga0182153_1005400Not Available1464Open in IMG/M
3300015329|Ga0182135_1034336Not Available874Open in IMG/M
3300015329|Ga0182135_1116414Not Available565Open in IMG/M
3300015330|Ga0182152_1056081Not Available742Open in IMG/M
3300015330|Ga0182152_1132766Not Available535Open in IMG/M
3300015330|Ga0182152_1134788Not Available532Open in IMG/M
3300015331|Ga0182131_1003331All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum1704Open in IMG/M
3300015331|Ga0182131_1011640Not Available1222Open in IMG/M
3300015331|Ga0182131_1133086Not Available537Open in IMG/M
3300015333|Ga0182147_1077516Not Available691Open in IMG/M
3300015333|Ga0182147_1168028Not Available504Open in IMG/M
3300015334|Ga0182132_1011357Not Available1296Open in IMG/M
3300015334|Ga0182132_1027159Not Available998Open in IMG/M
3300015336|Ga0182150_1073516Not Available694Open in IMG/M
3300015336|Ga0182150_1128385Not Available560Open in IMG/M
3300015338|Ga0182137_1058351Not Available797Open in IMG/M
3300015338|Ga0182137_1159968Not Available528Open in IMG/M
3300015339|Ga0182149_1030916Not Available969Open in IMG/M
3300015339|Ga0182149_1172535Not Available504Open in IMG/M
3300015340|Ga0182133_1048747All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum872Open in IMG/M
3300015340|Ga0182133_1090028Not Available693Open in IMG/M
3300015348|Ga0182115_1044030Not Available1280Open in IMG/M
3300015348|Ga0182115_1051007Not Available1211Open in IMG/M
3300015348|Ga0182115_1052136Not Available1200Open in IMG/M
3300015348|Ga0182115_1134990Not Available787Open in IMG/M
3300015348|Ga0182115_1155877Not Available731Open in IMG/M
3300015348|Ga0182115_1166000Not Available708Open in IMG/M
3300015349|Ga0182185_1092318Not Available861Open in IMG/M
3300015350|Ga0182163_1089243Not Available925Open in IMG/M
3300015350|Ga0182163_1292174Not Available510Open in IMG/M
3300015352|Ga0182169_1205440Not Available643Open in IMG/M
3300015353|Ga0182179_1138505Not Available753Open in IMG/M
3300015353|Ga0182179_1145903Not Available735Open in IMG/M
3300015353|Ga0182179_1179596Not Available668Open in IMG/M
3300015353|Ga0182179_1197259Not Available640Open in IMG/M
3300017408|Ga0182197_1036384Not Available862Open in IMG/M
3300017408|Ga0182197_1064379Not Available697Open in IMG/M
3300017414|Ga0182195_1118701Not Available647Open in IMG/M
3300017421|Ga0182213_1102813Not Available793Open in IMG/M
3300017421|Ga0182213_1134843Not Available692Open in IMG/M
3300017421|Ga0182213_1228384Not Available533Open in IMG/M
3300017422|Ga0182201_1027020Not Available877Open in IMG/M
3300017422|Ga0182201_1108655Not Available557Open in IMG/M
3300017422|Ga0182201_1145156Not Available502Open in IMG/M
3300017432|Ga0182196_1030121Not Available876Open in IMG/M
3300017432|Ga0182196_1095819Not Available597Open in IMG/M
3300017432|Ga0182196_1137811Not Available526Open in IMG/M
3300017439|Ga0182200_1086500Not Available631Open in IMG/M
3300017445|Ga0182198_1085909Not Available700Open in IMG/M
3300017447|Ga0182215_1037269Not Available1022Open in IMG/M
3300017693|Ga0182216_1125439Not Available635Open in IMG/M
3300017693|Ga0182216_1161861Not Available574Open in IMG/M
3300020023|Ga0182178_1010295Not Available661Open in IMG/M
3300025903|Ga0207680_11102280Not Available567Open in IMG/M
3300025972|Ga0207668_12083925Not Available511Open in IMG/M
3300026118|Ga0207675_100703107Not Available1020Open in IMG/M
3300028053|Ga0268346_1003550Not Available1056Open in IMG/M
3300028056|Ga0268330_1062171Not Available504Open in IMG/M
3300028058|Ga0268332_1041355Not Available639Open in IMG/M
3300028062|Ga0268342_1005061Not Available1015Open in IMG/M
3300028064|Ga0268340_1018967Not Available846Open in IMG/M
3300028064|Ga0268340_1050336Not Available615Open in IMG/M
3300028064|Ga0268340_1071493Not Available540Open in IMG/M
3300028142|Ga0268347_1003545Not Available984Open in IMG/M
3300028142|Ga0268347_1016776Not Available631Open in IMG/M
3300028151|Ga0268308_1010834Not Available724Open in IMG/M
3300028153|Ga0268320_1027054Not Available521Open in IMG/M
3300028154|Ga0268341_1006086Not Available828Open in IMG/M
3300028154|Ga0268341_1032452Not Available500Open in IMG/M
3300028253|Ga0268316_1003525Not Available886Open in IMG/M
3300028473|Ga0268319_1008962Not Available682Open in IMG/M
3300028474|Ga0268331_1028926Not Available500Open in IMG/M
3300028476|Ga0268329_1009030Not Available714Open in IMG/M
3300028523|Ga0268313_1007488Not Available670Open in IMG/M
3300032465|Ga0214493_1142014Not Available559Open in IMG/M
3300032502|Ga0214490_1092061Not Available694Open in IMG/M
3300032502|Ga0214490_1156557Not Available513Open in IMG/M
3300032889|Ga0314751_1041776Not Available927Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Switchgrass PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere73.64%
PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere18.18%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.73%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.73%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.82%
Switchgrass AssociatedHost-Associated → Plants → Unclassified → Unclassified → Unclassified → Switchgrass Associated0.91%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300009981Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_208 metaGHost-AssociatedOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300015270Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015280Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015297Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015301Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015306Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015309Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015310Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015312Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015313Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015316Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015317Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015320Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015324Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015327Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015328Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015329Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015330Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015331Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015333Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015334Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015336Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015338Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015339Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015340Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015348Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015349Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015350Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015352Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015353Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017408Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017414Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017421Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017422Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017432Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017439Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017445Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017447Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017693Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300020023Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_22AUG2016_LD2 MGHost-AssociatedOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028053Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_28AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028056Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_17JUL2017_LD1Host-AssociatedOpen in IMG/M
3300028058Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_07AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028062Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_28AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028064Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_28AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028142Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_28AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028151Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_05JUN2017_LD1Host-AssociatedOpen in IMG/M
3300028152Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_07AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028153Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_26JUN2017_LD1Host-AssociatedOpen in IMG/M
3300028154Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_28AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028253Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_26JUN2017_LD1Host-AssociatedOpen in IMG/M
3300028473Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_26JUN2017_LD1Host-AssociatedOpen in IMG/M
3300028474Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_17JUL2017_LD1Host-AssociatedOpen in IMG/M
3300028476Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_17JUL2017_LD1Host-AssociatedOpen in IMG/M
3300028523Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_05JUN2017_LD1Host-AssociatedOpen in IMG/M
3300028526Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_07AUG2017_LD1Host-AssociatedOpen in IMG/M
3300032465Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032502Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032889Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_07AUG2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0070668_10226959613300005347Switchgrass RhizosphereMHRGLPVLMSTELVVFSSSESEFGALVNSMLVRALEKFPSGSWMSSYVSSANDVSICNAVNVN*
Ga0068860_10203592623300005843Switchgrass RhizosphereMLRDLPVLKSIESVVFGSSESEFGASVNSTLA*ASEKTTSGSWIISYVPSANDVSICNAVKVN*
Ga0068860_10210401413300005843Switchgrass RhizosphereNNRIMHQALPGVVFIKSVG*GSSELEFRASVISTVLT*ASEKSPSGSWMSSYVPSANDVVSICNAIIGN*
Ga0105133_12608613300009981Switchgrass AssociatedLPVVVFMGSVGWGSSELGFGTSVSSTILA*ASEISPFGS*MSSYVPSASGVGSICNAEVGN*
Ga0134127_1191802013300010399Terrestrial SoilMHQGLPIVVSIESADFGSSESEFGALVNSTTLA*ASEKSPSGS*MNLYVLSANDVVSICNAVVGN*
Ga0134127_1333871213300010399Terrestrial SoilMHMGLPLATSMKLVDLGSSESEFGASVNSTLA*ASEEKSPSGSWVNSYLSSANDISICNPVKVN*
Ga0182183_100922313300015270Switchgrass PhyllosphereMHRGLPAVVSMESVGFGSFESEFGTSVNSITLAWASEISPSGSWINSYVPSAHGVISI*
Ga0182100_102102313300015280Switchgrass PhyllosphereMYRSLPVLMSKESVDFGSSESEFGASVSSMTIVLASELSPPDS*MSSYVPYANGVIFI*NAIVGKNSMVLYFSIAFLH*
Ga0182104_106034113300015297Switchgrass PhyllosphereMHRDLPLVTSIKSVDFGPNESEFGASVSSIILVSASEKSPSGSWINSYISSANGVISICNAVNIN*
Ga0182184_103279513300015301Switchgrass PhyllosphereMHRGLPVVESIKSVDFGSSELEFGASINSTMSVGVLEKSPSVSWMSSYVALTNDVVSICNAIIGI*
Ga0182180_109497713300015306Switchgrass PhyllosphereSESEFGTSVNSTTLAWASEISPSSSWMSSYVPSASDVVSI*NAIVGNSEVLEYSFPSL*
Ga0182098_101819713300015309Switchgrass PhyllosphereMHRVLPVLVSIESVDFGSSESKFGTSVSSATLTLASEISPSGSWINLYVPSANGVISI*
Ga0182162_108437813300015310Switchgrass PhyllosphereESVGFGSSEIEFGTSVISVVLA*ASEKSLSGSWMSSYVPSASEGDSIWNAVVEISKVLEYSFPSLKSCKPIK*
Ga0182162_108483313300015310Switchgrass PhyllosphereMLQGLPVLMSMELVDLGSSESKFGASVKLTMLA*ASEKTPSSS*INSYVPSTNDVVSICNAVNVN*
Ga0182168_108156413300015312Switchgrass PhyllosphereMYRGLPVLLSIESVDFGSSESEFGASVSSTTLAWASEISPSGSWINSYVPSTNGVISICNAIVGKK*
Ga0182168_111287213300015312Switchgrass PhyllosphereMHGGLPAVVSIELVGFDSYESEFGTSVNSTILAWASEISSSGSWISSYVPSASEVASI*
Ga0182164_105756213300015313Switchgrass PhyllosphereMHRDLPSVVSIESVDFGSSESEFGTSVISTVLA*ASEKSPSGSWMSSYVPSASDVVSICNAVVGI*
Ga0182164_108209313300015313Switchgrass PhyllosphereMHRVLPVVVSMGSVGFGSFESEFGTSVNSTTLAWASEISPSGSWMSSYVPSASGVASIGNAIVENSEVFEYSFPSL*
Ga0182121_100738913300015316Switchgrass PhyllosphereMYRGLPVLMSIKSIDFGSSESEFEASVSSTTLAWASEISPSGSWLSSYVPSTNGVISICNAIVGKKIRYYT*
Ga0182121_113810913300015316Switchgrass PhyllosphereMHRGLPSVVSIESVGLGSSESEFGTSVNSTVLAWASEKSPSGSWMSSYVPSASDVVSICNAIVGI*
Ga0182136_107243613300015317Switchgrass PhyllosphereVESMGSLAFGSSESGFGTSVNSTTLAWVSEISPSGSWMSLYVLSASDVASI*NAIVGISEVLEYSFPSL*
Ga0182136_114144413300015317Switchgrass PhyllosphereMHRGLPLVMSDESVDFNSSESGFKTSIKLAVLTWASEKFPSGSWMSSYVPSANDVVSICNAMIGN*
Ga0182165_110943413300015320Switchgrass PhyllosphereVD*GSSKLEFGASVNSTVLI*ASNKSSSGFLMNSYVPSANEVVSICNAIFEILVKCLSIAFLHYRVENQ*
Ga0182134_104915413300015324Switchgrass PhyllosphereMHRGLPVELSIESVGWGSSELELGASVISTKLAWASERSPSGSWISSYVPSAIDVVSICNAIVGN*
Ga0182134_114942013300015324Switchgrass PhyllosphereMHQGLPISVSIELVG*GSSELEFGALVNSTVLA*ASENSPSGSWICSYVPSANNVVSICNAIFGI*
Ga0182114_104587813300015327Switchgrass PhyllosphereESVGWGSSELELGASVISTKLAWASERSPSGSWISSYVPSAIDIVSICNAIVGN*
Ga0182114_106960213300015327Switchgrass PhyllosphereMCRGLPVLMSIESVDFGSSETEFGASVSSAILAWASEKFPSESWINSYVPSANGVISDRWVGGGAG*
Ga0182114_107531013300015327Switchgrass PhyllosphereMHWVLPVVVSIESVDFGFSESEFGTSVNSVALAWASEISPFGSGMSSYVPSANGVTAI*
Ga0182153_100540033300015328Switchgrass PhyllosphereMYRGWPILVSIESVDFGSSESEFEASVSSTTLAWASEISPSGSWISSYVPSTNGVISICNAIVGKK*
Ga0182135_103433613300015329Switchgrass PhyllosphereMSIELVDFESSESEFGASINSTMLA*ASEKSPSSS*ISSYVPSANDVISICDAVNVN*
Ga0182135_111641413300015329Switchgrass PhyllospherePAVVFIELVGFDSSESEFGTSVNSTILVWASEISSSGSWISSYVPSASEVASI*
Ga0182152_105608123300015330Switchgrass PhyllosphereHRGLPSMASIGSVGFGSSESEFGTSVNSIILAWASEKSPSGPWMSSYVPSASEVVSI*
Ga0182152_113276613300015330Switchgrass PhyllosphereVVSTESVDFGSSESEFGASINSTTSVGVLEKYPSVFWMSSYVPSANDVVSICNAIIGI*
Ga0182152_113478813300015330Switchgrass PhyllosphereMHRGLPVVVSIESVGFGSSESKFGTSVNSAMLAWASEIYPSGSWISSYVPSASGVTSI*
Ga0182131_100333113300015331Switchgrass PhyllosphereMYRGWPILVSIESVDFGSSESEFEASVSSTTLAWASEISPSGSWISSYVPSTNGVISICNAIVGKKIRYYT*
Ga0182131_101164013300015331Switchgrass PhyllosphereMHRGLPLVASIELVGFGSSELEFGTSVNSTILAWASEISPSGSWISSYVPSASEVASI*
Ga0182131_113308613300015331Switchgrass PhyllosphereMHRGLPLVGSEKSVGFGSSESKFVTSVNSTALTWASEKSPSGSWMSSYVPSANDVVFICNAIIGI*
Ga0182147_107751613300015333Switchgrass PhyllosphereILVSIESVDFGSSESEFEASVSSTTLAWASEISPSGSWISSYVPSTNGVISICNAIVGKKIRYYT*V*
Ga0182147_116802813300015333Switchgrass PhyllosphereMHQGLPVSVSIELVS*GSSELEFGASVNFTVLI*ASEISPSISWTSSYVPSANDIVSIYNAISGN*
Ga0182132_101135713300015334Switchgrass PhyllosphereVDFGSSESEFGASVSSTILARASEKSPTGSWMSSYVPSASEVVSICNAEVGN*
Ga0182132_102715913300015334Switchgrass PhyllosphereMHWGLPLVKSIELVDWGSSESEYGASVSSTMLP*ASEKSPSGSWMSSYIPSANGVTSICNAMIGN*
Ga0182150_107351613300015336Switchgrass PhyllosphereKSVDLGSSESEFEVSANSTILA*ASEKSPSGSWMSSYVPSANDVVSICNAVIGN*
Ga0182150_112838513300015336Switchgrass PhyllosphereMHRGLPLVVSIKSVSFGSSESEFGTSVNYAMLD*ALEKSPSDSWMSSYVPSANDVVSICNAIIGI*
Ga0182137_105835123300015338Switchgrass PhyllosphereHRGLPVVVSIGSVNWGSSESRFGISVNSAELTWASEEKSPSGSWMISLVLSASGVTSI*
Ga0182137_115996813300015338Switchgrass PhyllosphereNNRIMYRGLPVVVSMESIDFGSFESEFGTSVSSTMLAWASEISPPGSWISSYVPSVAG*
Ga0182149_103091613300015339Switchgrass PhyllosphereMSIELVDFESSESEFGASINSTMLA*ALEKSPSSS*ISSYVPSANDVISICNAVIVN*
Ga0182149_117253513300015339Switchgrass PhyllosphereMLQGLPVLMSMELVDLGSSESKFGASVKLTMLA*ASEKTTSGS*ISSYIPSTNDVSICNVVKVN*
Ga0182133_104874713300015340Switchgrass PhyllosphereMHRGLPIEVSIKSVDFGSSEFEFGASVISTVLARALEKSPSGSWMSSYVPSANNVVYICNATIGN*
Ga0182133_109002813300015340Switchgrass PhyllosphereMHRGLPLVESIESVDFGSSESEFGASVNSTILA*ALEKSPSGS*MSSYVPLANDVISICNAVDVN*
Ga0182115_104403033300015348Switchgrass PhyllosphereMYRGWPILVSIESVDFGSSESEFEASVSSTTLAWASEISPSGSWLSSYVPSTNGVISICNAIVGKK*
Ga0182115_105100713300015348Switchgrass PhyllosphereMHRGLLLVTSIKSVDFDSSESTFGTSVNSVTLVWASEIFLSSSWISSYVPSTSDIISICNAVVELVKCLSIAFLH*
Ga0182115_105213623300015348Switchgrass PhyllosphereMHRVLPVVVSIKSIDFGSSELEFGASVSSTTLAWASEISPSDSWISSYVLSANGVISI*
Ga0182115_113499013300015348Switchgrass PhyllosphereMHQGLPVSVSIESVS*GSSELEFGASVNFTLLI*ASEISPSISWTSSYVPSANDVVSICNAISGN*
Ga0182115_115587713300015348Switchgrass PhyllosphereMHQGLPSVVSIESVGFNSSESEFGTSVNSRILA*AQEIFPSGSWMSSYVPSASGVTSI*NAKIGNSEVLEYSFPSL*
Ga0182115_116600013300015348Switchgrass PhyllosphereIMHRGLPLVVSIKSVNFGSSELEFGASINSTMSVGVLEKSPSVSWMSSYVPLTNDVVSICNAIIGI*
Ga0182185_109231823300015349Switchgrass PhyllosphereMYRGLPVLLSIESVDFGSSESEFGASVSSTTLVWASEISPFGCWISSYVPSTNGVISICNAIVGKK*
Ga0182185_113810523300015349Switchgrass PhyllosphereGSSESEFGASVSSTILA*ASEKSPSGSWVSSYVPSANGMTSI*NAIFGKNLVKCLSIAFLHYKVVFKPIK*
Ga0182163_108924313300015350Switchgrass PhyllosphereMHWGLPIAVSIESVGFNSSETEFGTSVNSVTLAWASEISPSGSWMSSYVPSANGVTSI*
Ga0182163_129217413300015350Switchgrass PhyllosphereMHQGLPVLMSMELVDLGSSESKFGASVELTMLA*ASEKTTSRS*ISSYIPSTNDVSICNVVKVN*
Ga0182169_120544013300015352Switchgrass PhyllosphereMYQGLLVLMSIESVDFGSSESEFGNSVSSTLLACASEKSPTESWISSYVPSANGVTYI*NAIVKIVRYST*V*
Ga0182179_113850513300015353Switchgrass PhyllosphereMHRGLPSVVSIESVGFGSSESEFGTSVNSTILAWASEKSPSGSWISLYVPSASDVVSICNAVVGI*
Ga0182179_114590313300015353Switchgrass PhyllosphereMHWGLPAVVFMGSVGWGSSELGFGTSVSSTILA*ASEISASGS*MSSYVPSASGVGSICNAEVEN*
Ga0182179_117959613300015353Switchgrass PhyllosphereMHQGWPISVSIELVG*GSSELEFGALVNSTVLA*ASENSPSGSWICSYVPSANNVVSICNAIFGI*
Ga0182179_119725913300015353Switchgrass PhyllosphereMHRGLPGVVLMKSVNLGSSESEFGASFNSTLLAWASEKFSSGSLMSSYVPSANKVVSICNAIFGI*
Ga0182197_103638413300017408Switchgrass PhyllosphereMHRGLPAVVSIESIGFGSSESEFGTSVNSTILAWASEISPSGSWMSSYVPSANDVVSICNAVIGN
Ga0182197_106437913300017408Switchgrass PhyllosphereMHRGLPVSVFIELVDLGSSELEFGASANSTVLARALEKSLSGSWVSSYISSANDVVSICNAMIGN
Ga0182195_111870113300017414Switchgrass PhyllosphereMLQGLPVLMSMELVDLGSSESKFGASVKLTMLAXASEKTPSSSXINSYVPSANDVIFICNAVNVN
Ga0182213_110281323300017421Switchgrass PhyllosphereMHGVLPVVVSMGSVGFGSFESEFGTSVNSTTLAWASEISPSGSWMSSYVPSASGVASIGNAIVENSEVFEYSFPSL
Ga0182213_113484313300017421Switchgrass PhyllosphereMHQSLSIVVSIESVDFGSSESEFGALVNSTTLAXASKISPSGSWMSSYVPSTSDIVSICNAVLEISEVLKYSFPSLKSCYPIK
Ga0182213_122838413300017421Switchgrass PhyllosphereMHRDLPSVVSIESVGFGSSESEFGTSVNSTILAWASEISPSGSWISSYVPSASEVASIXDATIXVSEVLEYSFPSL
Ga0182201_102702013300017422Switchgrass PhyllosphereMHWGLPSVVSIESVGFGSSELEFGTSVNSTVLAWASEKSPSGSWINSYVPSVSGVTFI
Ga0182201_106323613300017422Switchgrass PhyllosphereEFETLVNSVTLAWASEISPSGSWISSYVPSASDVISIXNAVVGISEVLEYSFHSLKSCNSTNQTI
Ga0182201_110865513300017422Switchgrass PhyllospherePVDFGSSESRFGIAVNSAVLTXASEKSPSGSWMSSYVPSANDVVFICNAIIGI
Ga0182201_114515623300017422Switchgrass PhyllosphereMHRGLPSMVSIESVGFDSSESRFETLINSATLAWTSEISPSDSWMSSYVPSTSDIVSICNAVVGFSVVLKYSFPSLKSCYPIM
Ga0182196_103012123300017432Switchgrass PhyllosphereMHRGLPLMASIESVSVSSFELMFGTSINSAMLSWASEISSSGSWMSSYVPLTSDIISICNAVVGFSVVLKYSFPSLKSCYPIK
Ga0182196_109581923300017432Switchgrass PhyllosphereMHRGLPSVVSIELVGFDSSESEFGTSVNSATLAWTSEISPSGSWIRSYVLSANDVVSICNAMVGK
Ga0182196_113781113300017432Switchgrass PhyllosphereMHRGLPSVVSIESVGCGSSESEFGTLVNSVTLAWASEISPSGSWISSYVPSASDVISI
Ga0182200_108650013300017439Switchgrass PhyllosphereNRIMHRGLPSVVSIGLVYFNSSESEFGTSVNSTTLTWTLEKIPFYSGMSLYILSTSDIISICNAVVGISEVLK
Ga0182198_108590913300017445Switchgrass PhyllosphereMHRGLPLVASMGSLAFGSSESEFGTSVNSATLAWTSEISTSGSWMSLYVPSASDVVSIXNAVVGIS
Ga0182215_103726923300017447Switchgrass PhyllosphereLVVMSMGSVSFGSSESEFGTSVNSTILAWTSEISPSGSWISSYVPSTNGVISI
Ga0182216_112543913300017693Switchgrass PhyllosphereSIESVDFGSSESEFGASVSSTTLAWASEISPSGSWISSYVPSTNGVISICNAIVGKKIRYYT
Ga0182216_116186113300017693Switchgrass PhyllosphereMHQVLLVVVSIESVDFGSSESKFGTSVSLATLAXASEISPSGSWINSYVPSANGVISIXNAIVEN
Ga0182178_101029513300020023Switchgrass PhyllosphereMHRGLPLVVSIKSVNFGSSELEFGASINSTTLAGAPEKSSSGSWMSSYVLSANEVVSICNAIFEI
Ga0207680_1110228013300025903Switchgrass RhizosphereMHRGLPSVESMGSLAFGSSESGFGTSVNSATLAWASEISLSGSWMSSYVPFASDVVSICNAVVGISEVLEYSFPSL
Ga0207668_1208392513300025972Switchgrass RhizosphereMHRGLPSVVSIELVGFDSSESEFGTSVNSATLAWTSEISPSGSWMSSYVPFASDVVSICNAVVGISEVLE
Ga0207675_10070310733300026118Switchgrass RhizosphereMCLGLPVLMSIESVDFGSSEMEFGASVSSTILAWASEKSPSESWMSSYVPFANGVISI
Ga0268346_100355013300028053PhyllosphereMYRGWPILVSIESVDFGSSESEFEASVSSTTLAWASEISPSGSWISSYVPSTNGVISICNAIVGKKIRYYT
Ga0268330_106217113300028056PhyllosphereMHRVLPVLVSIESVDFGSSELKFETSVSSATLTLASEISPSGSWINLYVPSANGVISI
Ga0268332_104135513300028058PhyllosphereMHRGLPSVVSIKSVGFGSSGSGFGTLVNSATLAWTSEISPSGYWMSSYVPSTSDIISICNAVVEISEVLEYSFRSL
Ga0268342_100506113300028062PhyllosphereMHQGLPVLKSIESVVFGSSESEFGASVKLMMLASASEKTTSGSXINSYVPSTNDV
Ga0268340_101896723300028064PhyllosphereWPILVSIESVDFGSSESEFEASVSSTTLAWASEISPSGSWISSYVPSTNGVISICNAIVGKKIRYYT
Ga0268340_105033613300028064PhyllosphereMHRGLPVLVFIESVDFGSFKSEFGASVSSIVLAWASEESPSGSWISSYVPSANGVISL
Ga0268340_107149313300028064PhyllosphereMHRGLPLVVSIKSVNFGSSELEFGASINSTTLAGAPEKSSSGSWMSSYVLSANEVVSICNAI
Ga0268347_100354513300028142PhyllosphereMGNMHRGLPSVVSIESVGFGSSESEFGTSVISAVLAXASEKSPSGSWMSSYVASANDVVSICNAVVGKLVKCLSIAFLH
Ga0268347_101677613300028142PhyllosphereSIESVGFGSSESKFGTSVNSATLAWALEISPSGSWISSYVPSASGVISIXNAIVGISEVLEYSFPSL
Ga0268308_101083413300028151PhyllosphereMHRGLPSVVSIELVGFDSSESEFGTLVNSATFTWTSEISPSGFWISSYVLFANDVVSICNAMVGK
Ga0268336_101607213300028152PhyllosphereRGLPSVVSIESVGFGSSESEFGTSVISAVLAXASEKSPSGSWMSSYVASANDVVSICNAVVGKLVKCLSIAFLH
Ga0268320_102705413300028153PhyllosphereMSMKSVDFGSSESEFGASVMLTVLTXASDKSPFGSWMSSYVPSASEVVSICNAEVGN
Ga0268341_100608613300028154PhyllosphereVSIESVDFGSSESEFEASVSSTTLAWASEISPSGSWISSYVPSTNGVISICNAIVGKKIRYYT
Ga0268341_103245213300028154PhyllosphereMSKESVDFGSSEFKFGALVSSTILAWASEKSPSGSWINSYVPSANGVISIXNEKVGR
Ga0268316_100352513300028253PhyllosphereMHRGLPSVASRELVSFGPSESGFGTSVNSAMLAWTSEKSSSGSWMSLYIPFASDIVSICNAAVGISEVLKYSFPSLKSCYPIK
Ga0268319_100896213300028473PhyllosphereRGWPILVSIESVDFGSSESEFEASVSSTTLAWASEISPSGSWISSYVPSTNGVISICNAIVGKKIRYYT
Ga0268331_102892613300028474PhyllosphereAVSIESVGFNSSESEFGTSVNSVMLAWASEISPSGSWMSSYVPSANGVTSI
Ga0268329_100903013300028476PhyllosphereMHQGWPISVSIELVGXGSSELEFGALVNSTVLAXASENSPSGSWICSYVPSANNVVSICNAIFGI
Ga0268313_100748813300028523PhyllosphereMYRGWPILVSIESVDFGSSESEFEASVSSTTLAWASEISPSGSWISSYVPSTNGVISICNAIVGKKLRYYT
Ga0268339_100654313300028526PhyllosphereVSIESVDFGSSESEFEASVSSTTLAWAFEKSPSGSWVISYVPSTSGVTSIXNALFGKLVKCLSIAFLHLKVGIYPNKQSTKRI
Ga0214493_114201413300032465Switchgrass PhyllosphereMHRVLPVVVSMGSVGFGSSESEFGTLVNSTILARASEISLSGFWMSSYVLSTNGVIS
Ga0214490_109206113300032502Switchgrass PhyllosphereMHRGLPVVMSIESVDFGSSESKFGASVNSTTLAWVSEKSPSGSWISSYVPSANDVVSICNAIVGN
Ga0214490_115655713300032502Switchgrass PhyllosphereMHRGLPVVVSIESVGFGSSESEFGTSVNSTVLAWASEKSPSGSWINSYVPSVSGVNFI
Ga0314751_104177613300032889Switchgrass PhyllosphereMHRGLPSMASIGSLAFGSSEFGFETSVNSATLAWASEISPSSSWMSLYVPSASEVVSLDDEPI

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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