Metagenome Family F086449

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086449
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	56 residues
Representative Sequence	MDSAWVHKIAMRDMSLQGTELASALAYAEGEGWLADSPRKGWISLTRKGEVIAKAK
Number of Associated Samples	56
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	28.44 %
% of genes near scaffold ends (potentially truncated)	47.27 %
% of genes from short scaffolds (< 2000 bps)	88.18 %
Associated GOLD sequencing projects	48
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (69.091 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (33.636 % of family members)
Environment Ontology (ENVO)	Unclassified (47.273 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (79.091 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.71% β-sheet: 7.14% Coil/Unstructured: 57.14%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF00156	Pribosyltran	7.27
PF00589	Phage_integrase	1.82
PF04488	Gly_transf_sug	1.82
PF02617	ClpS	1.82
PF13481	AAA_25	0.91
PF04392	ABC_sub_bind	0.91
PF00571	CBS	0.91
PF04430	DUF498	0.91
PF06147	DUF968	0.91
PF04542	Sigma70_r2	0.91
PF04226	Transgly_assoc	0.91
PF00144	Beta-lactamase	0.91
PF00119	ATP-synt_A	0.91
PF01497	Peripla_BP_2	0.91
PF13406	SLT_2	0.91
PF04828	GFA	0.91
PF13899	Thioredoxin_7	0.91
PF01613	Flavin_Reduct	0.91
PF02518	HATPase_c	0.91
PF03330	DPBB_1	0.91
PF01391	Collagen	0.91
PF13827	DUF4189	0.91
PF00216	Bac_DNA_binding	0.91
PF12244	DUF3606	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG2127	ATP-dependent Clp protease adapter protein ClpS	Posttranslational modification, protein turnover, chaperones [O]	1.82
COG3774	Mannosyltransferase OCH1 or related enzyme	Cell wall/membrane/envelope biogenesis [M]	1.82
COG0356	FoF1-type ATP synthase, membrane subunit a	Energy production and conversion [C]	0.91
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.91
COG0614	ABC-type Fe3+-hydroxamate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.91
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.91
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.91
COG1504	Uncharacterized conserved protein, DUF498 domain	Function unknown [S]	0.91
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.91
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.91
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.91
COG1853	FMN reductase RutF, DIM6/NTAB family	Energy production and conversion [C]	0.91
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.91
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.91
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.91
COG3737	Uncharacterized protein, contains Mth938-like domain	Function unknown [S]	0.91
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.91
COG4558	ABC-type hemin transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.91
COG4592	ABC-type Fe2+-enterobactin transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.91
COG4594	ABC-type Fe3+-citrate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.91
COG4607	ABC-type enterochelin transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.91
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.09 %
All Organisms	root	All Organisms	30.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.09 %
cellular organisms	root	All Organisms → cellular organisms	30.00 %
Viruses	superkingdom	All Organisms → Viruses	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.09 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	30.00 %
Viruses	superkingdom	All Organisms → Viruses	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.09 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	18.18 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.91 %
Viruses	superkingdom	All Organisms → Viruses	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.09 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	17.27 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.91 %
Viruses	superkingdom	All Organisms → Viruses	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.09 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.91 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.91 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.91 %
Viruses	superkingdom	All Organisms → Viruses	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.09 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.82 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.91 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.91 %
Viruses	superkingdom	All Organisms → Viruses	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.09 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.82 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.91 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.91 %
Viruses	superkingdom	All Organisms → Viruses	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003505\|JGIcombinedJ51221_10387416	Not Available	568	Open in IMG/M
3300004633\|Ga0066395_10018981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2701	Open in IMG/M
3300005187\|Ga0066675_10074287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2173	Open in IMG/M
3300005332\|Ga0066388_100056305	All Organisms → cellular organisms → Bacteria	4108	Open in IMG/M
3300005332\|Ga0066388_100083562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3580	Open in IMG/M
3300005332\|Ga0066388_101659821	Not Available	1128	Open in IMG/M
3300005332\|Ga0066388_101714150	Not Available	1112	Open in IMG/M
3300005332\|Ga0066388_104975432	Not Available	675	Open in IMG/M
3300005332\|Ga0066388_105064024	All Organisms → Viruses	669	Open in IMG/M
3300005332\|Ga0066388_105261952	Not Available	656	Open in IMG/M
3300005332\|Ga0066388_105658551	Not Available	632	Open in IMG/M
3300005332\|Ga0066388_107730372	Not Available	539	Open in IMG/M
3300005439\|Ga0070711_100840734	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300005468\|Ga0070707_102227519	Not Available	515	Open in IMG/M
3300005764\|Ga0066903_100741269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1742	Open in IMG/M
3300005764\|Ga0066903_100841152	All Organisms → cellular organisms → Bacteria	1649	Open in IMG/M
3300005764\|Ga0066903_101157936	Not Available	1432	Open in IMG/M
3300005764\|Ga0066903_101564332	Not Available	1248	Open in IMG/M
3300005764\|Ga0066903_103040301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	908	Open in IMG/M
3300005764\|Ga0066903_104738678	Not Available	724	Open in IMG/M
3300005764\|Ga0066903_104806417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	718	Open in IMG/M
3300005764\|Ga0066903_106285916	Not Available	620	Open in IMG/M
3300005764\|Ga0066903_107052910	Not Available	582	Open in IMG/M
3300005764\|Ga0066903_107119486	Not Available	579	Open in IMG/M
3300005764\|Ga0066903_107207208	Not Available	575	Open in IMG/M
3300006102\|Ga0075015_100502150	Not Available	699	Open in IMG/M
3300006162\|Ga0075030_100534283	Not Available	932	Open in IMG/M
3300009792\|Ga0126374_10387241	Not Available	972	Open in IMG/M
3300009792\|Ga0126374_10703921	Not Available	760	Open in IMG/M
3300009792\|Ga0126374_11887877	Not Available	502	Open in IMG/M
3300010046\|Ga0126384_12099804	Not Available	542	Open in IMG/M
3300010048\|Ga0126373_11122623	Not Available	852	Open in IMG/M
3300010048\|Ga0126373_12079072	Not Available	630	Open in IMG/M
3300010358\|Ga0126370_10931282	Not Available	787	Open in IMG/M
3300010360\|Ga0126372_10604381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1053	Open in IMG/M
3300010360\|Ga0126372_10861148	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300010360\|Ga0126372_11960738	Not Available	631	Open in IMG/M
3300010361\|Ga0126378_10770804	Not Available	1072	Open in IMG/M
3300010366\|Ga0126379_10258951	Not Available	1719	Open in IMG/M
3300010366\|Ga0126379_11722312	Not Available	731	Open in IMG/M
3300010376\|Ga0126381_102850041	All Organisms → cellular organisms → Bacteria → Terrabacteria group	689	Open in IMG/M
3300010376\|Ga0126381_103206384	Not Available	647	Open in IMG/M
3300010398\|Ga0126383_11804941	Not Available	700	Open in IMG/M
3300012211\|Ga0137377_10091104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2880	Open in IMG/M
3300012948\|Ga0126375_11909308	Not Available	522	Open in IMG/M
3300012971\|Ga0126369_10279534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1659	Open in IMG/M
3300012971\|Ga0126369_11551191	Not Available	752	Open in IMG/M
3300016270\|Ga0182036_10349430	Not Available	1139	Open in IMG/M
3300016294\|Ga0182041_11662986	Not Available	590	Open in IMG/M
3300016294\|Ga0182041_11959459	Not Available	545	Open in IMG/M
3300016319\|Ga0182033_11046209	Not Available	727	Open in IMG/M
3300016319\|Ga0182033_11455647	Not Available	618	Open in IMG/M
3300016341\|Ga0182035_10622035	Not Available	935	Open in IMG/M
3300016357\|Ga0182032_11307250	Not Available	626	Open in IMG/M
3300016357\|Ga0182032_11692834	Not Available	551	Open in IMG/M
3300016371\|Ga0182034_10615242	Not Available	918	Open in IMG/M
3300016371\|Ga0182034_11436981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	603	Open in IMG/M
3300016387\|Ga0182040_10730091	Not Available	812	Open in IMG/M
3300016387\|Ga0182040_10929007	Not Available	723	Open in IMG/M
3300016422\|Ga0182039_10114950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2017	Open in IMG/M
3300016422\|Ga0182039_10632542	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300016422\|Ga0182039_12089700	Not Available	522	Open in IMG/M
3300016445\|Ga0182038_10413860	Not Available	1133	Open in IMG/M
3300016445\|Ga0182038_10717009	Not Available	872	Open in IMG/M
3300018086\|Ga0187769_10046331	Not Available	3005	Open in IMG/M
3300020580\|Ga0210403_10160278	Not Available	1841	Open in IMG/M
3300021560\|Ga0126371_10063037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3582	Open in IMG/M
3300021560\|Ga0126371_10147091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2413	Open in IMG/M
3300021560\|Ga0126371_11149273	Not Available	914	Open in IMG/M
3300021560\|Ga0126371_11155281	Not Available	912	Open in IMG/M
3300021560\|Ga0126371_11212903	Not Available	891	Open in IMG/M
3300025922\|Ga0207646_11762992	Not Available	530	Open in IMG/M
3300031231\|Ga0170824_108928498	All Organisms → cellular organisms → Bacteria	1769	Open in IMG/M
3300031544\|Ga0318534_10815467	Not Available	524	Open in IMG/M
3300031545\|Ga0318541_10145478	Not Available	1298	Open in IMG/M
3300031545\|Ga0318541_10416060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	751	Open in IMG/M
3300031573\|Ga0310915_10140666	Not Available	1663	Open in IMG/M
3300031679\|Ga0318561_10100805	Not Available	1517	Open in IMG/M
3300031719\|Ga0306917_10041351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3044	Open in IMG/M
3300031719\|Ga0306917_10774038	Not Available	753	Open in IMG/M
3300031719\|Ga0306917_11178892	Not Available	595	Open in IMG/M
3300031753\|Ga0307477_10604908	Not Available	739	Open in IMG/M
3300031796\|Ga0318576_10261168	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300031833\|Ga0310917_11015368	Not Available	556	Open in IMG/M
3300031890\|Ga0306925_10087679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3302	Open in IMG/M
3300031890\|Ga0306925_10610158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1151	Open in IMG/M
3300031890\|Ga0306925_10729214	Not Available	1035	Open in IMG/M
3300031894\|Ga0318522_10150347	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300031897\|Ga0318520_10530375	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300031910\|Ga0306923_10413553	Not Available	1533	Open in IMG/M
3300031910\|Ga0306923_10499348	Not Available	1376	Open in IMG/M
3300031910\|Ga0306923_10514341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1353	Open in IMG/M
3300031910\|Ga0306923_10658900	Not Available	1169	Open in IMG/M
3300031910\|Ga0306923_10990065	Not Available	914	Open in IMG/M
3300031912\|Ga0306921_10459972	Not Available	1482	Open in IMG/M
3300031912\|Ga0306921_11409545	Not Available	766	Open in IMG/M
3300031954\|Ga0306926_10589390	Not Available	1359	Open in IMG/M
3300031954\|Ga0306926_11425528	Not Available	802	Open in IMG/M
3300032001\|Ga0306922_10780667	Not Available	1000	Open in IMG/M
3300032001\|Ga0306922_11557921	Not Available	659	Open in IMG/M
3300032035\|Ga0310911_10325840	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300032035\|Ga0310911_10451297	Not Available	745	Open in IMG/M
3300032041\|Ga0318549_10115435	All Organisms → cellular organisms → Bacteria	1180	Open in IMG/M
3300032059\|Ga0318533_10074167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2309	Open in IMG/M
3300032059\|Ga0318533_11109260	Not Available	579	Open in IMG/M
3300032076\|Ga0306924_10544360	All Organisms → cellular organisms → Bacteria → Proteobacteria	1318	Open in IMG/M
3300032076\|Ga0306924_10962839	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300032261\|Ga0306920_104412353	Not Available	504	Open in IMG/M
3300033289\|Ga0310914_10526885	Not Available	1068	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.18%
Aquatic	Environmental → Aquatic	1.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.18%
Sediment	Environmental → Aquatic → Sediment	1.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.64%
Loam	Environmental → Terrestrial → Soil → Loam	23.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.82%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.91%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	50.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	20.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.91%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	21.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	20.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.55%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.73%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.91%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.91%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ51221_103874162	3300003505	Forest Soil	MDSAWVHKIAVRDMSLQGTALASALAYAEGEGWLADSPRKGWISLTRMG
Ga0066395_100189812	3300004633	Tropical Forest Soil	MASDWIHDMAVRDMSLEGTELASAIAYAEAEGWLADTPTRKGCISLTRRGEAMAKAK*
Ga0066675_100742871	3300005187	Soil	MASAWVDKIAVRDMALHGTALASALAYAEGEGWLTDSPRKGWVSLTRAGEVIAKQK*
Ga0066388_1000563051	3300005332	Tropical Forest Soil	AWVHKIAMRDMGLQGTDLASAIAYAEAEGWLADIPTRKDCISLTRTGEVIAKAKYFN*
Ga0066388_1000835628	3300005332	Tropical Forest Soil	WIHTIALRDVSLQDTALASALAYAEGVGWLVDSPRKGWVSVTRAGAFVALVK*
Ga0066388_1016598212	3300005332	Tropical Forest Soil	MDSAWVDKIAVRDMWLHGMQLASAIAYAEAEGWIIDSRTRKGWISLTRAGEVIAKAK*
Ga0066388_1017141502	3300005332	Tropical Forest Soil	MDSAWVDKIAVRDMWLHGMQLASAIAYAEAEGWLTDSRTRKGWISLTRTGETVAKLR*
Ga0066388_1049754322	3300005332	Tropical Forest Soil	KIAMRDMGLQGTDLASAIAYAEAEGWLADIPTRKDCISLTRTGEVIAKAK*
Ga0066388_1050640241	3300005332	Tropical Forest Soil	VRDMWLHGTQLASAIAYAEGEGWLADIPTRKGCISLTRAGEVVARVK*
Ga0066388_1052619521	3300005332	Tropical Forest Soil	AWVDKIAVRDMWLHGMQLASAIAYAEAEGWLTDSRTRKGWISLTRTGEAVAKLR*
Ga0066388_1056585511	3300005332	Tropical Forest Soil	ALVAAGADSRTPMASAWVHKIAMRDMGLQGTDLASAIAYAEGEGWLADIPTRKDCISLTRTGEVIAKAK*
Ga0066388_1077303721	3300005332	Tropical Forest Soil	RAPMDSAWVHKIAMRDMSLQGTELASAIAYAEGEGWLADSPRKGWISLTRKGEVIARAK*
Ga0070711_1008407341	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MASAWVDKIAVREMSLHGTALASAIAYAEAEGWLADIPTRKNCISLTRAGEVIAKQK*
Ga0070707_1022275192	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VHNIAVRDISLQGTDLASALAYAEGDGWLADSPRKGGLSLTRAGEVVAKAK*
Ga0066903_1007412694	3300005764	Tropical Forest Soil	AWVDKIAVRDMELHGTALASAIAYAEAEGWLIDSPRRGWVSLTGASEVIARGMTVDS*
Ga0066903_1008411523	3300005764	Tropical Forest Soil	AGADSRTPMDSAWVDKIAVREVSLHGTALASALAYAEGEGWLADIPTRKGCISLTRAGELVAKAKLR*
Ga0066903_1011579362	3300005764	Tropical Forest Soil	MDSAWVDKIAVRDVSLHCTGLASAIAYAEVEGWLADSPRRGWVSLTRAGEVIARVK*
Ga0066903_1015643322	3300005764	Tropical Forest Soil	MASNWVHDMAARDMSLEGTALASAIAYAEGESWLADVPTRKGCTSLTRAGEIIARVK*
Ga0066903_1030403012	3300005764	Tropical Forest Soil	MASAWVDKIAVREMSLHGTALASALAYAEGEGWLADIPARKDCISLTRAGEVIAKQK*
Ga0066903_1035732441	3300005764	Tropical Forest Soil	WVHNIAARDMSLQGVDLASAIAYAEAERWLADSRTRQGWVYLTRTGEVMAKAK*
Ga0066903_1047386782	3300005764	Tropical Forest Soil	MDSAWMDKIALRDVSLYGTQLASALAYAEGEGRLVDSPRKGWVSLTPAGKSVARVK*
Ga0066903_1048064172	3300005764	Tropical Forest Soil	MDSAWVHKIAMRDMSLQGTELASAIAYAEGEGWLADSPRKGWISLTRKGEVIARAK*
Ga0066903_1062859161	3300005764	Tropical Forest Soil	VRDMALRGTQLASAIAYAEAEGWLADSPRTGWISLTRAGEVIARQKMVG*
Ga0066903_1070529101	3300005764	Tropical Forest Soil	AVRDMSLEGTELASAIAYAEAEGWLADTPTRKGCISLTRTGEAMAKAK*
Ga0066903_1071194861	3300005764	Tropical Forest Soil	MDSAWVRKIAMKDMSLQGTELASALAYAEAEGWLADSPRKGWISLTRKGEVIAKAK*
Ga0066903_1072072081	3300005764	Tropical Forest Soil	AKLRAPMASDWVHDIAVRDVWLEGTALASVIAYAEGEGWLIDSPRKGWVFLTRAGEVIARIK*
Ga0075015_1005021502	3300006102	Watersheds	MDSAWVHKIAVRDMSLQGTALASALAYAEGEGWLADSPRKGWISLTRMGEVVAKAN*
Ga0075030_1005342832	3300006162	Watersheds	MDSAWVHKIAVRDVSLQGTALASALAYAEGEGWLADSPRKGWISLTRMGEVVAKVN*
Ga0126374_103872411	3300009792	Tropical Forest Soil	MANDWVHSIAVRDVSLEGTALASVIAYAEGEGWLADSPRTGWVSLTRAGEVIARVK*
Ga0126374_107039212	3300009792	Tropical Forest Soil	MTRAWVDKIAVRDMALHGTALASALAYAEGEGWLADIPTRKDCISLTRTGEVIAKAK*
Ga0126374_118878772	3300009792	Tropical Forest Soil	MDSAWVHKIAMRDMSLQGTELASALAYAEGEGWLADSPRKGWISLTRKGEVIARAT*
Ga0126384_120998041	3300010046	Tropical Forest Soil	MARAWVDKIAVREMSLHGTALASALAYAEGEGWLADIPTRKDCISLTRAGEVIAKQK*
Ga0126373_111226232	3300010048	Tropical Forest Soil	MDSAWVRKIAMKDMSLQGTELASALAYAEGEGWLADSPRKGWMSLTRKGEVIAKAK*
Ga0126373_120790721	3300010048	Tropical Forest Soil	MASAWVDKIAVREMSLHGTALASALAYAEGEGWLADIPTRKDCISLTRAGEVIAKQK*
Ga0126370_109312821	3300010358	Tropical Forest Soil	MDSAWVRKIAMKDMSLQGTELASALAYAEGEGWLADSPRKGWISLTRKGEVIAKAK*
Ga0126372_106043812	3300010360	Tropical Forest Soil	MDSAWVRKIAMKDVSLQGTELASALAYAEGEGWLADSPRKGWISLTRKGEVIAKAK*
Ga0126372_108611482	3300010360	Tropical Forest Soil	MASDWIHDMAVRDMSLEGTELASAIAYAEAEGWLADTPTRKGCISLTRTGEAMAKAK*
Ga0126372_119607381	3300010360	Tropical Forest Soil	MDSAWVDKIAVRELSLHGTALASALAYAEGEGWLADIPTRKDCISLTRTGEVIAKAK*
Ga0126378_107708042	3300010361	Tropical Forest Soil	MDSAWVDKIAVRDMWLHGMQLASAIAYAEAEGWIIDSRTRKGWISLTRAGEVIAKKKLI*
Ga0126379_102589514	3300010366	Tropical Forest Soil	MARAWVDKIALREMSLHGTALASALAYAEGEGWLADIPTRKDCISLTRAGEVIAKQK*
Ga0126379_117223121	3300010366	Tropical Forest Soil	MDSAWADEIDMELHGTGLASAIAYAEGEGWLADIPTRKDCISLTRTGEVIAEAKLP*
Ga0126381_1028500412	3300010376	Tropical Forest Soil	TPMDSAWVDKIAVREMSLHGTGLASAIAYAEGEGWLADIPTRKGCISLTRAGELVAKAKLR*
Ga0126381_1032063842	3300010376	Tropical Forest Soil	MASAWVDKIAVRDMGLQGTDLASAIAYAEAEGWLADIPTRKDCISLTRAGEVIAKQK*
Ga0126383_118049411	3300010398	Tropical Forest Soil	MDSAWVDKIAVRDMALDGTALASALAYAEAEGWLIDSPRKGWVSLTRAGEVIA
Ga0137377_100911041	3300012211	Vadose Zone Soil	VAAGAKPRAPMDSAWIDEIAVRDVSLHGTQLASALAYAEGEGWLVDRPRKGWVSLTRAGEVVARVK*
Ga0126375_119093081	3300012948	Tropical Forest Soil	MDSAWVRKIAMKDMSLQGTELASALAYAEGEGWLADSPRKGWISLTRKGEVIARAK*
Ga0126369_102795343	3300012971	Tropical Forest Soil	MASAWVDKIAVRDVALHGTALASAIAYAEGEGWLADIPTRKDCISLTRKGEVVAKLP*
Ga0126369_115511912	3300012971	Tropical Forest Soil	MDNAWVRKIAMKDMSLQGTELASALAYAEGEGWLADSPRKGWISLTRKGEVIAKAK*
Ga0182036_103494303	3300016270	Soil	DKIAVRDMWLHGMQLASAIAYAEAEGWLTDTPTIKGCVSLTRAGEVVAKTAAIARGG
Ga0182041_116629861	3300016294	Soil	VHKIAMRDMSLQGTELASALAYAEGEGWLADSRTRKGWISLTRTGEAVAKLR
Ga0182041_119594592	3300016294	Soil	SDWVHKMALRDMSLQGTDLASAIAYAEGEGWLADIPTRKGCISLTRAGEVVARAK
Ga0182033_110462092	3300016319	Soil	MASDWIDKIAVREMALHGTALASAIAYAKAEGWLTDSPREGWISLTHAGEVIARQK
Ga0182033_114556472	3300016319	Soil	VGKIAVREMSLQCTELASAIAYAEAEGWLADSRRKGCISLTRAGEVIARIK
Ga0182035_106220351	3300016341	Soil	SAWVDKIAVRDASLHGTGLASALAYAEAEGWLIDSPRKGWRSVTRAGEVIARVK
Ga0182032_113072501	3300016357	Soil	NTRAPMANIWVHSLGMTDLALEETDLAAALAYAEGEGWLADSPRKGWISLTRTGEVVAKA
Ga0182032_116928341	3300016357	Soil	RTPMASDWVHDMAARDMSLEGTALTSAIAYAEGESWLADVPTRKGCTSLTRAGEIIAKVK
Ga0182034_106152422	3300016371	Soil	MARAWVNNIAVRDISLWETELASAIAYAEGEGWLTDSPRKGWVSLTRAGEVVARAK
Ga0182034_114369811	3300016371	Soil	KIAVRDMWLHGMQLASAIAYAEAEGWLTDTPTIKGCVSLTRAGEVVAKTAAIARGG
Ga0182040_107300912	3300016387	Soil	VAAGADSRTPMDSAWVDKIAVRDMALQGTELASAIAYAEAEGWLVDTPTRKGCISLTRAGEIIARAK
Ga0182040_109290072	3300016387	Soil	ASDWVHKMALRDMSLQGTDLASAIAYAEGEGWLADIPTRKGCISLTRAGEVVARAK
Ga0182039_101149502	3300016422	Soil	MASDWIHDMAVRDMSLEGTELASAIGYAEAEGWLADTPTRKGCISLTRTGEAMAKAK
Ga0182039_106325422	3300016422	Soil	MDSAWVDKIAVRDMALQGTELASAIAYAEAEGWLIDSPRKGWVSLTRAGEVIARVK
Ga0182039_120897001	3300016422	Soil	MASDWIDKIAVREMALHGTALASAVAYAEAEGWLTDSPREGWISLTHAGEVIARQK
Ga0182038_104138601	3300016445	Soil	VRDMALHGTALASALAYAEAEGWLIDSPRPGWISLTRAGEVIARVK
Ga0182038_107170092	3300016445	Soil	MDSAWVHKIAMRDMSLQGTELASALAYAEGEGWLADSPRKGWISLTRKGEVIARAK
Ga0187769_100463315	3300018086	Tropical Peatland	MDSAWIDKIAMRDVSLHGTQLASALAYAEGEGWLVDSPRKGRVALTRAGEVVARVK
Ga0210403_101602782	3300020580	Soil	MDSAWVHKIAVRDMSLQGTALASALAYAEGEGWLADSPRKGWISLTRMGEVVARLIDLNC
Ga0126371_100630373	3300021560	Tropical Forest Soil	MANDWVHSIAVRDVSLEGTALASVIAYAEGEGWLADSPRTGWVSLTRAGEVIARVK
Ga0126371_101470912	3300021560	Tropical Forest Soil	MARAWVDKIAVREMSLHGTALASALAYAEGEGWLADIPTRKDCISLTRAGEVIAKQK
Ga0126371_111492731	3300021560	Tropical Forest Soil	MASAWVDKIAVREMSLHGTALASALAYAEGEGWLADIPARKDCISLTRAGEVIAKQK
Ga0126371_111552811	3300021560	Tropical Forest Soil	SAWVDKIAVREMSLHGTALASALAYAEGEGWLADIPTRKDCISLTRAGEVIAKQK
Ga0126371_112129031	3300021560	Tropical Forest Soil	MTRAWVDKIAVRDMALHGTALASALAYAEGEGWLADIPTRKDCISLTRTGEVIAKAK
Ga0207646_117629921	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MASDWVHNIAVRDISLQGTDLASALAYAEGDGWLADSPRKGGLSLTRAGEVVAKAK
Ga0170824_1089284981	3300031231	Forest Soil	PRAPMDSAWIDEIAVRDVSLHGTQLASALAYAEGEGWLVDSPRKGWVSLTHAGEVVARVK
Ga0318534_108154672	3300031544	Soil	VAAGANCRAPMDSAWVHKIAMRDMSLQGTELASALAYAEGEGWLADSPRKGWISLTRKGEVIAKAK
Ga0318541_101454783	3300031545	Soil	MDSAWVHKIAMRDMSLQGTELASALAYAEGEGWLADSPRKGWISLTRKGEVIAKAK
Ga0318541_104160602	3300031545	Soil	MASDWIHDMAVRDMSLEGTELASAIAYAEAEGWLADTPTRKGCISLTRTGEAMAKAK
Ga0310915_101406661	3300031573	Soil	MDRAWVDKIAVREMSLQCTELASAIAYAEAEGWLADSPRKGWISFTRAGEVIARVK
Ga0318561_101008051	3300031679	Soil	AVRDMSLEGTELASAIAYAEAEGWLADTPTRKGCISLTRTGEAMAKAK
Ga0306917_100413514	3300031719	Soil	MAVRDMSLEGTELASAIAYAEAEGWLADTPTRKGCISLTRTGEAMAKAK
Ga0306917_107740382	3300031719	Soil	VRDMALQGTELASAIAYAEAEGWLIDSPRKGWVSLTRAGEVIARVK
Ga0306917_111788922	3300031719	Soil	MASDWVHKMALRDMSLQGTDLASAIAYAEGEGWLADLPTRKGWIFLTRTGEVVAQANDS
Ga0307477_106049081	3300031753	Hardwood Forest Soil	MASAWVDKIAMREMSLHGTALASAIAYAEAEGWLADIPTRKDCISLTRAGEVIAKQK
Ga0318576_102611682	3300031796	Soil	MDSAWVHEIAMRDMSLRGTELASALAYAEGEGWLADSPRKGWISLTRKGEVIAKAK
Ga0310917_110153681	3300031833	Soil	MANIWVHSLGMTDLALEETDLAAALAYAEGEGWLADSPRKGWISLTRTGEVVAK
Ga0306925_100876793	3300031890	Soil	MDSAWVDKIAVRDMALQGTELASAIAYAEAEGWLVDTPTRKGCISLTRAGEIIARAK
Ga0306925_106101583	3300031890	Soil	MNGDWVHEIALRDLSLHVTKLASAIAYAEGEGWFADSPRRKDWICLTRAGE
Ga0306925_107292141	3300031890	Soil	MANIWVHSLGMTDLALEETDLAAALAYAEGEGWLADSPRKGWISLTRTGEVVAKAK
Ga0318522_101503472	3300031894	Soil	MASDWIHDMAVRDMSLEGTELASAIAYAEAEGWLADTPTRKGCISLTRTGEA
Ga0318520_105303751	3300031897	Soil	MASDWIHDMAVRDMSLEGTELASAIAYAEAEGWIADTPTRKGCISLTRTGEAM
Ga0306923_104135534	3300031910	Soil	MASTWIHTIALRDVSLQDTALASALAYAEGVGWLVDSPRKGWVSVTRAGAFV
Ga0306923_104993482	3300031910	Soil	MASAWVHKIAMREMSLQGTELASAIAYAEGEGWLADIPTRKDCISLTRTGEVIAKARNNN
Ga0306923_105143411	3300031910	Soil	RDVSLQDTALASALAYAEGVGWLVDSPRKGWVSVTRAGAFVARVK
Ga0306923_106589001	3300031910	Soil	DSAWVHEIAMRDMSLRGTELASALAYAEGEGWLADSPRKGWISLTRKGEVIAKAK
Ga0306923_109900653	3300031910	Soil	MDSAWVDKIAVRDMELHGTALASAIAYAEAEGWLADSARKGWVSLTRAGEVIARVK
Ga0306921_104599723	3300031912	Soil	ALVAAGANSRTPMGSAWVHEIAMRDMSLQGTELASALAYAEGEGWLADSPRKGWISLTRKGEVIAKAK
Ga0306921_114095452	3300031912	Soil	AAGANSRAPMDSAWVDKIAVRDMWLHGMQLASAIAYAEAEGWLTDSRTRKGWISLTRTGEAVAMLP
Ga0306926_105893902	3300031954	Soil	MDSAWVHNIAVRDVSLEGTAPASAIAYAEAEWLADSPRKGWVSLTRPGEVIAKAK
Ga0306926_114255282	3300031954	Soil	MDSAWVDKIAVRDMELHGTALASAIAYAEAEGWLADSARKGWVSLTRA
Ga0306922_107806673	3300032001	Soil	WVHDIALRDMSLQGTNLASALAYAEEAGWLVDSARKGWVSLTCAGEVVARLK
Ga0306922_115579212	3300032001	Soil	MDSAWVGKIAVREMSLQCTELASAIAYAEAEGWLADSPRKGWISLTRAGGVIARAK
Ga0310911_103258403	3300032035	Soil	MRDLSLQSTNLASAIAYAEAEGWLVDSPRPGWVSLTRAGEVVARVK
Ga0310911_104512972	3300032035	Soil	MDSAWVDKIAVRDMWLHGMQLASAIAYAEAEGWLTDSRTRKGWISLTRTGEAVAKLR
Ga0318549_101154351	3300032041	Soil	MDSAWVHKIAMRDMSLQGTELASALAYAEGEGWLADSPRKGWISLTRKGEVIAKAKDFN
Ga0318533_100741671	3300032059	Soil	GSAWVHEIAMRDMSLQGTELASALAYAEGEGWLADSPRKGWISLTRKGEVIAKAK
Ga0318533_111092601	3300032059	Soil	PMDSAWVHKIAMRDMSLQGTELASALAYAEGEGWLADSPRKAWISLTRKGEVIAKAK
Ga0306924_105443601	3300032076	Soil	GANSRTPMASDWIHDMAVRDMSLEGTELASAIGYAEAEGWLADTPTRKGCISLTRTGEAMAKAK
Ga0306924_109628392	3300032076	Soil	MDSAWVHKIAMRDMSLQGTELASALAYAEGEGWLADSPRKGWISLTRKGEVIAK
Ga0306920_1044123531	3300032261	Soil	MDKAWVDKIAVRDMELRGTALASAIAYAEGEGWLADIPTRKGWLSLTRTGEV
Ga0310914_105268851	3300033289	Soil	AVRDASLHGTGLASALAYAEAEGWLIDSPRKGWRSVTRAGEVIARAK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F086449

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences