Metagenome Family F086451

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086451
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	48 residues
Representative Sequence	VDSAEGMATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQLVEADQRF
Number of Associated Samples	63
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	88.00 %
% of genes near scaffold ends (potentially truncated)	86.36 %
% of genes from short scaffolds (< 2000 bps)	80.91 %
Associated GOLD sequencing projects	57
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (61.818 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (39.091 % of family members)
Environment Ontology (ENVO)	Unclassified (70.909 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.091 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.86% β-sheet: 0.00% Coil/Unstructured: 57.14%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF04392	ABC_sub_bind	32.73
PF01435	Peptidase_M48	4.55
PF00355	Rieske	1.82
PF09084	NMT1	0.91
PF00430	ATP-synt_B	0.91
PF07813	LTXXQ	0.91
PF04909	Amidohydro_2	0.91
PF13360	PQQ_2	0.91
PF02894	GFO_IDH_MocA_C	0.91
PF06411	HdeA	0.91
PF13365	Trypsin_2	0.91
PF00589	Phage_integrase	0.91
PF00565	SNase	0.91
PF03781	FGE-sulfatase	0.91
PF08867	FRG	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	32.73
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	3.64
COG0673	Predicted dehydrogenase	General function prediction only [R]	0.91
COG0711	FoF1-type ATP synthase, membrane subunit b or b'	Energy production and conversion [C]	0.91
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.91
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.91
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.82 %
Unclassified	root	N/A	38.18 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.82 %
Unclassified	root	N/A	38.18 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.82 %
Unclassified	root	N/A	38.18 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	40.00 %
Unclassified	root	N/A	38.18 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	4.55 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.18 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	32.73 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.73 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.82 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.91 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.18 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	16.36 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.73 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	1.82 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.91 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.91 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.18 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	12.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.73 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.82 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	1.82 %
Kiloniellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Kiloniellaceae	0.91 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.91 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.91 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.18 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	10.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.73 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.82 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1.82 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.91 %
Kiloniella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Kiloniellaceae → Kiloniella	0.91 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.91 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.18 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	4.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.73 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.82 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	1.82 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.82 %
Kiloniella laminariae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Kiloniellaceae → Kiloniella → Kiloniella laminariae	0.91 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.91 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.91 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.18 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	4.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.73 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.82 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.82 %
Bradyrhizobium sp. 40	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 40	0.91 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.91 %
Kiloniella laminariae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Kiloniellaceae → Kiloniella → Kiloniella laminariae	0.91 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.91 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.91 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_103360812	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300005332\|Ga0066388_103760586	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	774	Open in IMG/M
3300005332\|Ga0066388_105455888	Not Available	644	Open in IMG/M
3300005467\|Ga0070706_101070756	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300005713\|Ga0066905_102058439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	530	Open in IMG/M
3300005713\|Ga0066905_102215803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	512	Open in IMG/M
3300005713\|Ga0066905_102285408	All Organisms → cellular organisms → Bacteria → Proteobacteria	505	Open in IMG/M
3300005764\|Ga0066903_101151563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1435	Open in IMG/M
3300005764\|Ga0066903_101206283	All Organisms → cellular organisms → Bacteria → Proteobacteria	1405	Open in IMG/M
3300005764\|Ga0066903_103912162	Not Available	799	Open in IMG/M
3300005764\|Ga0066903_104830806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	716	Open in IMG/M
3300005764\|Ga0066903_107164484	Not Available	577	Open in IMG/M
3300005764\|Ga0066903_107164910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	577	Open in IMG/M
3300005764\|Ga0066903_107822126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	549	Open in IMG/M
3300005764\|Ga0066903_107897289	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300005764\|Ga0066903_108103807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	538	Open in IMG/M
3300005764\|Ga0066903_108308868	Not Available	530	Open in IMG/M
3300005764\|Ga0066903_108521338	All Organisms → cellular organisms → Bacteria → Proteobacteria	523	Open in IMG/M
3300009792\|Ga0126374_10158710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1381	Open in IMG/M
3300009792\|Ga0126374_10947940	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300010046\|Ga0126384_11589210	Not Available	615	Open in IMG/M
3300010047\|Ga0126382_11818270	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	573	Open in IMG/M
3300010362\|Ga0126377_13597214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	501	Open in IMG/M
3300010366\|Ga0126379_11610601	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300010398\|Ga0126383_12567136	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	593	Open in IMG/M
3300010398\|Ga0126383_13104634	Not Available	542	Open in IMG/M
3300012202\|Ga0137363_11539953	Not Available	556	Open in IMG/M
3300016270\|Ga0182036_11911825	Not Available	503	Open in IMG/M
3300016294\|Ga0182041_10047903	All Organisms → cellular organisms → Bacteria → Proteobacteria	2870	Open in IMG/M
3300016294\|Ga0182041_10333716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1269	Open in IMG/M
3300016357\|Ga0182032_10085338	All Organisms → cellular organisms → Bacteria → Proteobacteria	2183	Open in IMG/M
3300016357\|Ga0182032_11172051	Not Available	661	Open in IMG/M
3300016371\|Ga0182034_10092024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2146	Open in IMG/M
3300016387\|Ga0182040_10660785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	851	Open in IMG/M
3300016387\|Ga0182040_11390441	Not Available	594	Open in IMG/M
3300016404\|Ga0182037_10541157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 40	982	Open in IMG/M
3300016404\|Ga0182037_11928277	Not Available	529	Open in IMG/M
3300016422\|Ga0182039_10482047	Not Available	1068	Open in IMG/M
3300016445\|Ga0182038_10047770	All Organisms → cellular organisms → Bacteria → Proteobacteria	2836	Open in IMG/M
3300016445\|Ga0182038_10459450	Not Available	1079	Open in IMG/M
3300016445\|Ga0182038_11593229	Not Available	587	Open in IMG/M
3300021560\|Ga0126371_11377785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	837	Open in IMG/M
3300031545\|Ga0318541_10066228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1885	Open in IMG/M
3300031572\|Ga0318515_10148280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1250	Open in IMG/M
3300031572\|Ga0318515_10276573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	900	Open in IMG/M
3300031640\|Ga0318555_10051943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2082	Open in IMG/M
3300031719\|Ga0306917_10688785	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300031719\|Ga0306917_10771301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	754	Open in IMG/M
3300031719\|Ga0306917_10884079	Not Available	699	Open in IMG/M
3300031723\|Ga0318493_10141559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1238	Open in IMG/M
3300031744\|Ga0306918_10086682	All Organisms → cellular organisms → Bacteria → Proteobacteria	2193	Open in IMG/M
3300031744\|Ga0306918_10323342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1192	Open in IMG/M
3300031744\|Ga0306918_10827235	Not Available	722	Open in IMG/M
3300031744\|Ga0306918_11104489	Not Available	614	Open in IMG/M
3300031748\|Ga0318492_10089735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1498	Open in IMG/M
3300031771\|Ga0318546_11015590	Not Available	583	Open in IMG/M
3300031777\|Ga0318543_10119788	All Organisms → cellular organisms → Bacteria	1142	Open in IMG/M
3300031793\|Ga0318548_10501725	Not Available	593	Open in IMG/M
3300031796\|Ga0318576_10104824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1293	Open in IMG/M
3300031798\|Ga0318523_10679261	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300031819\|Ga0318568_10236416	All Organisms → cellular organisms → Bacteria	1130	Open in IMG/M
3300031821\|Ga0318567_10575995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	639	Open in IMG/M
3300031831\|Ga0318564_10476529	Not Available	543	Open in IMG/M
3300031831\|Ga0318564_10516553	Not Available	518	Open in IMG/M
3300031833\|Ga0310917_10594654	Not Available	751	Open in IMG/M
3300031879\|Ga0306919_10293061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Kiloniellaceae → Kiloniella → Kiloniella laminariae	1233	Open in IMG/M
3300031879\|Ga0306919_10325415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1170	Open in IMG/M
3300031890\|Ga0306925_11721580	Not Available	604	Open in IMG/M
3300031894\|Ga0318522_10106707	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300031896\|Ga0318551_10080216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1707	Open in IMG/M
3300031897\|Ga0318520_10214176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1140	Open in IMG/M
3300031897\|Ga0318520_10758488	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300031910\|Ga0306923_10330626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1739	Open in IMG/M
3300031910\|Ga0306923_10412343	Not Available	1536	Open in IMG/M
3300031912\|Ga0306921_10049081	All Organisms → cellular organisms → Bacteria	4785	Open in IMG/M
3300031912\|Ga0306921_10322470	All Organisms → cellular organisms → Bacteria	1808	Open in IMG/M
3300031941\|Ga0310912_10503286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	944	Open in IMG/M
3300031942\|Ga0310916_11206951	Not Available	625	Open in IMG/M
3300031942\|Ga0310916_11741275	Not Available	503	Open in IMG/M
3300031945\|Ga0310913_10315321	Not Available	1104	Open in IMG/M
3300031945\|Ga0310913_10984536	Not Available	591	Open in IMG/M
3300031945\|Ga0310913_11134646	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300031947\|Ga0310909_10454841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1074	Open in IMG/M
3300031947\|Ga0310909_10507668	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300032010\|Ga0318569_10227579	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300032035\|Ga0310911_10039852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2400	Open in IMG/M
3300032041\|Ga0318549_10032179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2072	Open in IMG/M
3300032042\|Ga0318545_10055219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1349	Open in IMG/M
3300032059\|Ga0318533_10260379	All Organisms → cellular organisms → Bacteria	1253	Open in IMG/M
3300032063\|Ga0318504_10086125	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1387	Open in IMG/M
3300032065\|Ga0318513_10038698	All Organisms → cellular organisms → Bacteria	2096	Open in IMG/M
3300032076\|Ga0306924_11620076	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300032076\|Ga0306924_12565634	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300032091\|Ga0318577_10012113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3422	Open in IMG/M
3300032094\|Ga0318540_10238149	Not Available	878	Open in IMG/M
3300033289\|Ga0310914_10285300	Not Available	1487	Open in IMG/M
3300033289\|Ga0310914_10510178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1087	Open in IMG/M
3300033289\|Ga0310914_10560679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1031	Open in IMG/M
3300033289\|Ga0310914_11897827	Not Available	500	Open in IMG/M
3300033290\|Ga0318519_10078327	Not Available	1733	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.73%
Loam	Environmental → Terrestrial → Soil → Loam	17.27%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	70.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.36%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	39.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	16.36%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.91%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1033608121	3300005332	Tropical Forest Soil	VDSVEGMATREAMSGHHNFRPGQQNKLVSEPPIAAPDEHAQFVEADQRFRAALG
Ga0066388_1037605863	3300005332	Tropical Forest Soil	MATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQLVEADQRFRAALGQAIAAGG
Ga0066388_1054558881	3300005332	Tropical Forest Soil	MATLETMSAHHNFRAGQQNKLVSEPPIAAPDEHAQLVEADQRFRAALGQAIAAGGERI
Ga0070706_1010707561	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VDSAEGMATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQLVEADQRFRAALGQ
Ga0066905_1010142921	3300005713	Tropical Forest Soil	VDSAEGMTTLEGMSSHHNFRPGQQNKLVSEPPIAAPDEHAQLVEADQR
Ga0066905_1020584391	3300005713	Tropical Forest Soil	VESAEGMATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQL
Ga0066905_1022158031	3300005713	Tropical Forest Soil	VDSAEGMATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQLVEADQRFRA
Ga0066905_1022854081	3300005713	Tropical Forest Soil	VDKVDSAEGMATLEAMSSHHNFRPGQQNKLVSEPPIAAPD
Ga0066903_1011515631	3300005764	Tropical Forest Soil	VDTAEGMATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQF
Ga0066903_1012062831	3300005764	Tropical Forest Soil	MATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQL
Ga0066903_1039121621	3300005764	Tropical Forest Soil	MATLEAMSRHHNFRSGQQNQLVSEPPIAAPDEHAQLVEADQRFQAALDVAIATGAKRGRTNVPR*
Ga0066903_1048308061	3300005764	Tropical Forest Soil	VDSADGMATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQFVEA
Ga0066903_1071644841	3300005764	Tropical Forest Soil	VDSAEGTATLGAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQLVEADQRFR
Ga0066903_1071649101	3300005764	Tropical Forest Soil	VDSAEGMATLETMSTHHNFRAGQQNKLVSEPPIAAPDEHAQFVEADQRFRAALGQAIAAG
Ga0066903_1078221261	3300005764	Tropical Forest Soil	MATLEAMSSHHNFRLGQQNKLVSEPPIAAPDEHAQFVEADQRFRAALGQAIAAG
Ga0066903_1078972892	3300005764	Tropical Forest Soil	MATLEAMSGHHNFRPGQQNKLVSEPPIAAPDEHAQLVEADQRFRAALG
Ga0066903_1081038071	3300005764	Tropical Forest Soil	VDSVEGMDTLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQFVEADQ
Ga0066903_1083088681	3300005764	Tropical Forest Soil	MATFEAMSSHHNFRSGQQNKLVSEPPIAAPDEHARLVEAD
Ga0066903_1085213382	3300005764	Tropical Forest Soil	MATLEAMSTHHNFRPGQQNKLVSERPIAAPDEHAQLVEADQRFRAALG
Ga0126374_101587103	3300009792	Tropical Forest Soil	MATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQLVEADQRFRAALGQAIA
Ga0126374_109479403	3300009792	Tropical Forest Soil	MATLEAMSSHRDFHPEQQSKLVAEPPVAAPDEHAQLLW*
Ga0126384_115892101	3300010046	Tropical Forest Soil	MATLEAMSSHRNFRPGERNKLVSEPPIAAPDEHAQLVEAD
Ga0126382_112558241	3300010047	Tropical Forest Soil	MATLEGMSSHHNFRPGQQNKLVSEPPIAAPDDHAHLVEA
Ga0126382_118182701	3300010047	Tropical Forest Soil	VDSAEGMATLEAMSSRYNFRPGQQNKLVSEPPIAAPDE
Ga0126370_101850083	3300010358	Tropical Forest Soil	PFPPGADKVDSAEGMATLEAMSSHRDFHPEQQSKLVAEPPVAAPDERAQLLW*
Ga0126372_106073892	3300010360	Tropical Forest Soil	AGPFPPGADKVDSAEGMATLEAMSSHRDFHPEQQSKLVAEPPVAAPDEHAQLLW*
Ga0126377_135972141	3300010362	Tropical Forest Soil	SAEGMATLEAMSSHRDFHPEQQSKLVAEPPVAAPDEHAQLLW*
Ga0126379_116106011	3300010366	Tropical Forest Soil	MATLEVMSSHHNFRPGQQNKLVSEPPIAAPDEHAQLVEADQR
Ga0126383_125671361	3300010398	Tropical Forest Soil	MARLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQLVEADQRF
Ga0126383_131046341	3300010398	Tropical Forest Soil	LEAMGSRRHDQGNELILEPPIAAPEEHARLVEADQRFQAALGQAIAAGDERHENCHS*
Ga0137363_115399531	3300012202	Vadose Zone Soil	MSSHHNFRPGQRNKLVSEPPIAAPDEHAQLVEADQRF
Ga0182036_102270943	3300016270	Soil	VDSADTMATLEAMSSHHNFRPGQQNKLVSEPPIAAPD
Ga0182036_119118251	3300016270	Soil	VDSAEGMGTLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQLVEADQRFRAA
Ga0182041_100479035	3300016294	Soil	VDSAEGMATPEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQLVEADQ
Ga0182041_103337161	3300016294	Soil	MATLEAMSGHHNFRPGQQNKLVSEPPIAAPDEHAQLVEADQRFRAALGQ
Ga0182041_116529091	3300016294	Soil	MSLPPGADKVDSAEGMATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQLVEADQR
Ga0182035_100492031	3300016341	Soil	MSLPPGADKVDSAEGMATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQL
Ga0182032_100853381	3300016357	Soil	VDSAEGMATPEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQLVEA
Ga0182032_111720511	3300016357	Soil	MATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQFVEADQRFRAAL
Ga0182034_100920241	3300016371	Soil	VDSAEGMATLEAMSSHHNFRPGQQNKLISEPPIAAPDEHAQFVEADQRFRAALGQ
Ga0182040_106607851	3300016387	Soil	MATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQLVEADRRFRAALGQAIAAGGERIEAGRCN
Ga0182040_113904412	3300016387	Soil	VDSAEGMGTLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQLVEA
Ga0182037_105411572	3300016404	Soil	VDSAEGMATLEAMSSHHNFRPGQQNKLVSEPPIAAP
Ga0182037_119282772	3300016404	Soil	VDSAEGMATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQLVEADQRF
Ga0182039_104820471	3300016422	Soil	VDSAEGMATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQLVEADQRFRAALGQAIAAGGERIE
Ga0182038_100477701	3300016445	Soil	VDSAEGMATPEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQLVEADQRFRAAL
Ga0182038_104594501	3300016445	Soil	MATLEAMSSHHNFRAGQQNKLVSEPPIAAPDEHAQLVEADQRFRAALGQAIAAGGERIEA
Ga0182038_115932292	3300016445	Soil	MSLPPGADKVDSAEGMATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQFVEADQRFRAALGQAIAAG
Ga0126371_113777852	3300021560	Tropical Forest Soil	MATLEAMGSRRHDQGNKLILEPPIAAPEEHARLVEADQRFQAALGQAIAAGDERHENCHS
Ga0318534_105394362	3300031544	Soil	VDSADTMATLEAMSSHHNFRPGQQNKLVSEPPIAAPDDHAHLVEAD
Ga0318541_100662281	3300031545	Soil	VDSAERMATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQFVE
Ga0318515_101482801	3300031572	Soil	MATLEAMSGHHNFRPGQQNKLVSEPPIAAPDEHAQLVEADQRFRAA
Ga0318515_102765732	3300031572	Soil	MATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQLVEADQR
Ga0318555_100519434	3300031640	Soil	VDSAEGMATLEAMTSHHNFRPGQQNNLVSEPPIAAPDEHAQLVEADQRFRAALGQAIAAG
Ga0306917_106887851	3300031719	Soil	VDSAEGMATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQLVEADQRFRAA
Ga0306917_107713012	3300031719	Soil	RSRQVRTKWTAAEGMATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQLVEADQR
Ga0306917_108840791	3300031719	Soil	VDSAEGMATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQLVEADQ
Ga0318493_101415591	3300031723	Soil	MATLEAMSGHHNFRPGQQNKLVSEPPIAAPDEHAQLVEDDQR
Ga0306918_100866821	3300031744	Soil	VDSAEGMATPEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQLVEADQRF
Ga0306918_103233423	3300031744	Soil	MAEGMATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQLV
Ga0306918_108272351	3300031744	Soil	MATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQLVEADQ
Ga0306918_111044891	3300031744	Soil	MATLEAMSSHHNFRAGQQNKLVSEPPIAAPDEHAHLVEADQRFQAALGQV
Ga0318492_100897351	3300031748	Soil	MATLEAMSGHHNFRPGQQNKLVSEPPIAAPDEHAQLVEADQRF
Ga0318546_110155903	3300031771	Soil	MATLEAMSGHHNFRPGQQNKLVSEPPIAAPDEHAQLVEADQRFRAALGQAIAAGGERIE
Ga0318543_101197881	3300031777	Soil	MATLEAMTSHHNFRPGQQNNLVSEPPIAAPDEHAQLVEADQRFRAALGHA
Ga0318548_105017251	3300031793	Soil	MSSHHNFRPGQQNKLVSEPPIAAPDEHAQLVEADQRFRTALGQAFAAGGERIE
Ga0318576_101048245	3300031796	Soil	VDSTEGMATLEAMSGHHNFRPGQQNKLVSEPPIAAPDEHAQLVEADQ
Ga0318523_106792612	3300031798	Soil	MAEGMATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHA
Ga0318568_102364162	3300031819	Soil	VDSAEGMATLEAMSSHHNFRPGQQNKFVSEPPIAAPDEHAQLVEADQRFRAALGQAIAAG
Ga0318567_105759952	3300031821	Soil	AEGMATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQLVEADQR
Ga0318564_104765291	3300031831	Soil	MATLEAMSGHHNFRPGQQNKLVSEPPIAAPDEHAQLVEA
Ga0318564_105165531	3300031831	Soil	VDSAEGMATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQLVEADQRFRAAL
Ga0310917_105946543	3300031833	Soil	MATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQLVEADQRFRAALGQAI
Ga0306919_100728761	3300031879	Soil	VDSADTMATLEAMSSHHNFRPGQQNKLVSEPPIAAPDD
Ga0306919_102930611	3300031879	Soil	VDSAEGMATPEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQL
Ga0306919_103254151	3300031879	Soil	SRQVRTKWTAAEGMATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQLVEADQR
Ga0306925_117215801	3300031890	Soil	VDSAEGMATLEAISSHHNFRPGQQNKLVSEPPIAAPDEHA
Ga0318522_101067072	3300031894	Soil	VDSAEGMATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQLV
Ga0318551_100802161	3300031896	Soil	MATLEAMSSHHNFRPGQRNKLVSESPIAAPEEHAP
Ga0318520_102141762	3300031897	Soil	MATLEAMSSHHNFRPGQQNKLVSEPPIAAPDDHAHLVEADQRFRAALGQAIADECARNRSGTHC
Ga0318520_107584882	3300031897	Soil	MATLEAMSSHHNFRPGQQNKLVSEPAIAAPDEHAQFVEADQRFRTALG
Ga0306923_103306263	3300031910	Soil	VDSAERMATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQFVEADQR
Ga0306923_104123432	3300031910	Soil	VDSAEGMATLEAMSSHHNFRQGQQNKLVSEPPIAAPDEHAQLVEADQ
Ga0306921_1004908111	3300031912	Soil	VDSAEGMATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEQAQLVEADQRFRTALGQAIAAGGE
Ga0306921_103224703	3300031912	Soil	MAMSSHHNFRPGQRNKLVSEPPIAPPDEHAQLVEADE
Ga0310912_105032861	3300031941	Soil	VDSAERMATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQF
Ga0310916_112069513	3300031942	Soil	VDSAEGMATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHALLVEADQRFRAALGQAIAAG
Ga0310916_117412751	3300031942	Soil	VDSAEGMATLEAISSHHNFRPGQQNKLVSEPPIAAPDEHAQFVEA
Ga0310913_103153211	3300031945	Soil	VDSAEGMATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEQAQLVEADQRFRT
Ga0310913_109845361	3300031945	Soil	VDSAEGMATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQFVEADQRFRAALGQAIAAGALSASRRSRP
Ga0310913_111346462	3300031945	Soil	VDSAEGMATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQFVEADQRFRAALGQAIAAGGERI
Ga0310909_104548412	3300031947	Soil	VDSAEGMATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEH
Ga0310909_105076681	3300031947	Soil	VDGAERLATLEAMSSHHSFRTGHQNKLVSEPPIAAPDDHAQLVEADRRFQA
Ga0318569_102275791	3300032010	Soil	VDSAEGMATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQLVEADQRFR
Ga0310911_100398524	3300032035	Soil	VDSAEGMATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQ
Ga0318549_100321791	3300032041	Soil	VDSAEGMATLEAMTSHHNFRPGQQNKLVSEPPIAAPDEHAQLVEAD
Ga0318545_100552193	3300032042	Soil	MATLEAMSGHHNFRPGQQNKLVSEPPIAAPDEHAQLVEADQ
Ga0318533_102603792	3300032059	Soil	VDSAEGMATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQLVEADQRFRAALGQA
Ga0318504_100861251	3300032063	Soil	MSSHHNFRPGQQNKLVSEPPIAAPDEHAQLIGFDQL
Ga0318513_100386984	3300032065	Soil	VDSAEGMATLEAMTSHHNFRPGQQNNLVSEPPIAAPDEHAQLVEADQRFRAALGHAIAAG
Ga0306924_102540744	3300032076	Soil	MSLPPGADKVDSAEGMATLEAMSSHHNFRPGQQNKLVSEPPIAAPD
Ga0306924_116200762	3300032076	Soil	VDSAEGMATLEAMSSHHNFRPGQQNKLVSEPPIAAADEH
Ga0306924_125656342	3300032076	Soil	VDSAEGMATLEAMSSHHNFRPGQQNKLISEPPIAAPDEHAQFVEADQRFRAALG
Ga0318577_1001211311	3300032091	Soil	MATLEAMSGHHNFRPGQQNKLVSEPPIAAPDEHAQLVEADQRFQAALGQA
Ga0318540_102381494	3300032094	Soil	MATLEAMSGHHNFRPGQQNKLVSEPPIAAPDEHAQLVEADQRFRAALGQAIAAGGER
Ga0310914_102853001	3300033289	Soil	MATLEAMSSHHNFRQGQQNKLVSEPPIAAPDEHAQ
Ga0310914_105101783	3300033289	Soil	VDSAEGMATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHALLVEA
Ga0310914_105606792	3300033289	Soil	QVRTKWTAAEGMATLEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQLVEADQR
Ga0310914_118978271	3300033289	Soil	MATLEAMSSHHNFRAGQQNKLVSEPPIAAPDEHAHLVEADQRFRAALGQAIAAG
Ga0318519_100783273	3300033290	Soil	VDSAEGMATPEAMSSHHNFRPGQQNKLVSEPPIAAPDEHAQLVEADQRFQAALGQAIAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F086451

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences