Metagenome Family F086455

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086455
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	87 residues
Representative Sequence	VSASKERWNEQEAILLLQRAGKLVQEIETSGTRMPHSEREHYHARLVAAHDARDMAAYRIALEGYVEGARLAYRKATGRQRKREEG
Number of Associated Samples	32
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	64.22 %
% of genes near scaffold ends (potentially truncated)	36.36 %
% of genes from short scaffolds (< 2000 bps)	90.91 %
Associated GOLD sequencing projects	27
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (80.909 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (64.546 % of family members)
Environment Ontology (ENVO)	Unclassified (67.273 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (67.273 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.65% β-sheet: 0.00% Coil/Unstructured: 40.35%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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SCOP family	SCOP domain	Representative PDB	TM-score
f.24.1.1: Cytochrome c oxidase subunit I-like	d3s8ga_	3s8g	0.75149
a.202.1.1: Superantigen MAM	d2icwg_	2icw	0.73664
e.81.1.1: CRISPR associated protein CasA/Cse1	d4an8a_	4an8	0.68278
a.168.1.1: SopE-like GEF domain	d2joka_	2jok	0.67115
f.13.1.0: automated matches	d4jq6a_	4jq6	0.66847

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF07366	SnoaL	1.82
PF06197	DUF998	0.91
PF13545	HTH_Crp_2	0.91
PF13614	AAA_31	0.91
PF08240	ADH_N	0.91
PF05406	WGR	0.91
PF07452	CHRD	0.91
PF13474	SnoaL_3	0.91
PF13515	FUSC_2	0.91
PF13148	DUF3987	0.91
PF00561	Abhydrolase_1	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG3371	Uncharacterized membrane protein	Function unknown [S]	0.91
COG3831	WGR domain, predicted DNA-binding domain in MolR	Transcription [K]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.91 %
All Organisms	root	All Organisms	19.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.91 %
cellular organisms	root	All Organisms → cellular organisms	19.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.91 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	19.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.91 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	17.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.91 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11.82 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.91 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	6.36 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	1.82 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.91 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.91 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	6.36 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples	1.82 %
Actinobacteria bacterium 13_1_20CM_3_68_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	0.91 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.91 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	6.36 %
uncultured Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	1.82 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.91 %
Actinobacteria bacterium 13_1_20CM_3_68_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.91 %
unclassified Rubrobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae	1.82 %
uncultured Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	1.82 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples	0.91 %
Rubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter	0.91 %
Agromyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agromyces	0.91 %
Actinobacteria bacterium 13_1_20CM_3_68_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.91 %
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1.82 %
uncultured Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	1.82 %
Agromyces bauzanensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agromyces → Agromyces bauzanensis	0.91 %
Rubrobacter aplysinae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter aplysinae	0.91 %
uncultured Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	0.91 %
Actinobacteria bacterium 13_1_20CM_3_68_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_118969523	Not Available	620	Open in IMG/M
3300004016\|Ga0058689_10042824	Not Available	817	Open in IMG/M
3300005562\|Ga0058697_10102630	Not Available	1188	Open in IMG/M
3300005562\|Ga0058697_10109447	Not Available	1157	Open in IMG/M
3300005562\|Ga0058697_10188082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	927	Open in IMG/M
3300005562\|Ga0058697_10226695	Not Available	859	Open in IMG/M
3300005562\|Ga0058697_10255581	Not Available	818	Open in IMG/M
3300005562\|Ga0058697_10466567	Not Available	638	Open in IMG/M
3300005562\|Ga0058697_10692108	Not Available	541	Open in IMG/M
3300009789\|Ga0126307_10097203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	2331	Open in IMG/M
3300009789\|Ga0126307_10262103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter aplysinae	1389	Open in IMG/M
3300009789\|Ga0126307_10343255	Not Available	1202	Open in IMG/M
3300009789\|Ga0126307_10443712	Not Available	1047	Open in IMG/M
3300009789\|Ga0126307_10602830	Not Available	887	Open in IMG/M
3300009789\|Ga0126307_10670755	Not Available	837	Open in IMG/M
3300009789\|Ga0126307_10779215	All Organisms → cellular organisms → Bacteria → Terrabacteria group	772	Open in IMG/M
3300009789\|Ga0126307_11240345	Not Available	604	Open in IMG/M
3300009789\|Ga0126307_11695544	Not Available	514	Open in IMG/M
3300009840\|Ga0126313_10391856	Not Available	1101	Open in IMG/M
3300009840\|Ga0126313_10516346	Not Available	958	Open in IMG/M
3300009840\|Ga0126313_10562888	Not Available	916	Open in IMG/M
3300009840\|Ga0126313_10755794	Not Available	789	Open in IMG/M
3300009840\|Ga0126313_11679594	Not Available	530	Open in IMG/M
3300009840\|Ga0126313_11841110	Not Available	507	Open in IMG/M
3300010036\|Ga0126305_10245721	Not Available	1149	Open in IMG/M
3300010036\|Ga0126305_10407334	Not Available	897	Open in IMG/M
3300010036\|Ga0126305_10596385	Not Available	742	Open in IMG/M
3300010036\|Ga0126305_10840206	Not Available	625	Open in IMG/M
3300010036\|Ga0126305_10911035	Not Available	601	Open in IMG/M
3300010037\|Ga0126304_10078899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2051	Open in IMG/M
3300010037\|Ga0126304_10334679	Not Available	1006	Open in IMG/M
3300010037\|Ga0126304_10387646	Not Available	932	Open in IMG/M
3300010037\|Ga0126304_10395911	Not Available	922	Open in IMG/M
3300010037\|Ga0126304_10429459	Not Available	884	Open in IMG/M
3300010037\|Ga0126304_10600820	All Organisms → cellular organisms → Bacteria → Terrabacteria group	741	Open in IMG/M
3300010037\|Ga0126304_10761709	Not Available	656	Open in IMG/M
3300010038\|Ga0126315_10344344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	928	Open in IMG/M
3300010038\|Ga0126315_10391723	Not Available	872	Open in IMG/M
3300010038\|Ga0126315_10601455	Not Available	710	Open in IMG/M
3300010038\|Ga0126315_10924277	Not Available	581	Open in IMG/M
3300010039\|Ga0126309_10036088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	2286	Open in IMG/M
3300010039\|Ga0126309_10050912	Not Available	1979	Open in IMG/M
3300010039\|Ga0126309_10076985	Not Available	1666	Open in IMG/M
3300010039\|Ga0126309_10120155	Not Available	1378	Open in IMG/M
3300010039\|Ga0126309_10621552	Not Available	683	Open in IMG/M
3300010039\|Ga0126309_10633014	Not Available	678	Open in IMG/M
3300010039\|Ga0126309_10976813	Not Available	567	Open in IMG/M
3300010040\|Ga0126308_10389190	Not Available	929	Open in IMG/M
3300010040\|Ga0126308_10392900	All Organisms → cellular organisms → Bacteria → Terrabacteria group	924	Open in IMG/M
3300010040\|Ga0126308_10440527	Not Available	874	Open in IMG/M
3300010040\|Ga0126308_10440698	Not Available	874	Open in IMG/M
3300010040\|Ga0126308_10470435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	846	Open in IMG/M
3300010040\|Ga0126308_11011680	Not Available	583	Open in IMG/M
3300010041\|Ga0126312_10430145	Not Available	940	Open in IMG/M
3300010041\|Ga0126312_10845609	Not Available	665	Open in IMG/M
3300010041\|Ga0126312_11246205	Not Available	549	Open in IMG/M
3300010041\|Ga0126312_11330474	Not Available	532	Open in IMG/M
3300010042\|Ga0126314_10003324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8217	Open in IMG/M
3300010042\|Ga0126314_10201661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1402	Open in IMG/M
3300010042\|Ga0126314_10324695	Not Available	1101	Open in IMG/M
3300010042\|Ga0126314_10338410	Not Available	1078	Open in IMG/M
3300010042\|Ga0126314_10518649	Not Available	866	Open in IMG/M
3300010042\|Ga0126314_11496242	Not Available	507	Open in IMG/M
3300010044\|Ga0126310_10276988	Not Available	1144	Open in IMG/M
3300010044\|Ga0126310_10277288	Not Available	1144	Open in IMG/M
3300010044\|Ga0126310_10282105	Not Available	1135	Open in IMG/M
3300010044\|Ga0126310_10774227	Not Available	735	Open in IMG/M
3300010044\|Ga0126310_10816368	Not Available	719	Open in IMG/M
3300010044\|Ga0126310_11473441	Not Available	557	Open in IMG/M
3300010044\|Ga0126310_11828250	Not Available	507	Open in IMG/M
3300010045\|Ga0126311_10064777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2402	Open in IMG/M
3300010045\|Ga0126311_10072444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	2289	Open in IMG/M
3300010045\|Ga0126311_10075858	Not Available	2243	Open in IMG/M
3300010045\|Ga0126311_10104763	Not Available	1948	Open in IMG/M
3300010045\|Ga0126311_10463837	Not Available	985	Open in IMG/M
3300010045\|Ga0126311_11774960	Not Available	522	Open in IMG/M
3300010166\|Ga0126306_10080489	All Organisms → cellular organisms → Bacteria	2320	Open in IMG/M
3300010166\|Ga0126306_10255495	Not Available	1338	Open in IMG/M
3300010166\|Ga0126306_11116488	Not Available	646	Open in IMG/M
3300010395\|Ga0058701_10656652	Not Available	578	Open in IMG/M
3300014487\|Ga0182000_10186617	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300014487\|Ga0182000_10219192	Not Available	742	Open in IMG/M
3300014488\|Ga0182001_10007179	Not Available	2315	Open in IMG/M
3300014488\|Ga0182001_10024121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agromyces → Agromyces bauzanensis	1452	Open in IMG/M
3300014488\|Ga0182001_10040930	Not Available	1203	Open in IMG/M
3300014488\|Ga0182001_10193651	Not Available	737	Open in IMG/M
3300014488\|Ga0182001_10249790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	685	Open in IMG/M
3300014488\|Ga0182001_10486033	Not Available	564	Open in IMG/M
3300018465\|Ga0190269_10444656	Not Available	820	Open in IMG/M
3300018465\|Ga0190269_10958008	Not Available	640	Open in IMG/M
3300018468\|Ga0066662_11444242	Not Available	714	Open in IMG/M
3300018468\|Ga0066662_13013808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	501	Open in IMG/M
3300019767\|Ga0190267_10768325	Not Available	634	Open in IMG/M
3300021388\|Ga0213875_10083075	Not Available	1494	Open in IMG/M
3300027750\|Ga0209461_10172311	Not Available	538	Open in IMG/M
3300027766\|Ga0209796_10052270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1230	Open in IMG/M
3300027766\|Ga0209796_10127118	Not Available	793	Open in IMG/M
3300027766\|Ga0209796_10189390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	651	Open in IMG/M
3300027809\|Ga0209574_10192115	Not Available	648	Open in IMG/M
3300030496\|Ga0268240_10026690	Not Available	1134	Open in IMG/M
3300030510\|Ga0268243_1082313	Not Available	731	Open in IMG/M
3300030510\|Ga0268243_1084881	Not Available	722	Open in IMG/M
3300030513\|Ga0268242_1051071	Not Available	779	Open in IMG/M
3300030513\|Ga0268242_1120952	Not Available	559	Open in IMG/M
3300030515\|Ga0268254_10227328	Not Available	612	Open in IMG/M
3300032002\|Ga0307416_103030694	Not Available	562	Open in IMG/M
3300032159\|Ga0268251_10142534	Not Available	896	Open in IMG/M
3300032159\|Ga0268251_10354435	Not Available	623	Open in IMG/M
3300034377\|Ga0334931_178528	Not Available	517	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.73%
Host-Associated	Host-Associated	17.27%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.73%
Plants	Host-Associated → Plants	17.27%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.73%
Phylloplane	Host-Associated → Plants → Phylloplane	13.64%
Phyllosphere	Host-Associated → Plants → Phyllosphere	1.82%
Roots	Host-Associated → Plants → Roots	0.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.82%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	13.64%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	1.82%
Loam	Environmental → Terrestrial → Soil → Loam	0.91%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	79.09%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	13.64%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.82%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	1.82%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.91%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.91%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	64.55%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	13.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.73%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.82%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	1.82%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.91%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004016	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz	Host-Associated	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010395	Agave microbial communities from Guanajuato, Mexico - Or.Ma.e	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300027750	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027766	Agave microbial communities from Guanajuato, Mexico - Or.Sf.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027809	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300030513	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG (v2)	Environmental	Open in IMG/M
3300030515	Agave microbial communities from Guanajuato, Mexico - Or.Sf.rz (v2)	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300034377	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 27HNS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1189695231	3300002568	Soil	VSGLEQRWNEPEAILLLQRAGKLVAGIEASGARMPQSDRELYHARLVTAHDTQDMAAYRIALEGYVEGARRAYRKTKGGATARGRMK*
Ga0058689_100428242	3300004016	Agave	VLLQRAGKLVEVLEAAGVRMPQSEREQYHARLLAAHDAQDMAAYRIALKAYTETAREAYRKAKKGVKHEER*
Ga0058697_101026301	3300005562	Agave	MKTDTTPAQRYGRKGVSASEEQWNELEAVLLLQRAGKLVQEIESSGTRMPRSDRKLYHARLVAAHDAQDVAAYRVALEGYVEGARLAYRKATGRQRKREEG*
Ga0058697_101094472	3300005562	Agave	VSASEERWSEQEAIVLLQRAGKLVEVLEAAGVRMPQSEREQYHARLLAAHDAQDMAAYRIALKAYTETAREAYRKAKKGVKHEER*
Ga0058697_101880822	3300005562	Agave	VGATKERWNEQEAILLLQGAAKLVQEIETSGTRMPHSEREQYHARLVAAHDARDMAAYRIALEGYAQGARKAYRKMKPGRRKREEG*
Ga0058697_102266952	3300005562	Agave	VSASKEQWNELEAVLLLQRAGKLVQEIESSGTRMAHSDRKLYHARLVAAHDAQDVAAYRVALEGYVEGAR
Ga0058697_102555812	3300005562	Agave	VSASKERWNEQEAILLLQRAVKLVQEIETSGTRMPHSEREHYHARLVAAHDAHDMAAYRIALEGYAEGARKAYRKTKGGEAKA*
Ga0058697_104665672	3300005562	Agave	VGATNERWNEQEAILLLQGAAKLVQEIETSGTRMPHSEREQYHARLVAAHDARDMAAYRIALEGYAQGARKAYRKMKPGRRKHEEG*
Ga0058697_106921081	3300005562	Agave	VSASKERWNEQEAILLLQRAAKSVQEIETSGARMPLSEREQYHARLVAAHDAHDMAAYRIALEGYVEGARLA
Ga0126307_100972031	3300009789	Serpentine Soil	MLLLNRYGRKSVSASKELWNEQEAILLLERAAKSVQVIETSGTRMPQSEREQYHARLVAAHDARDMAAYRIALEGYAEGARKAYRKTKGVRRKREDKPRRKPCDL*
Ga0126307_102621033	3300009789	Serpentine Soil	VSASQERWSEQEAIVLLQRAGKLVEVLEAAGVRMPQSEREQYHARLLAAHDAQDMAAYRIALKAYTETAREAYRKAKKGVKHEER*
Ga0126307_103432552	3300009789	Serpentine Soil	VSASKERWNEQEAILLLQRAGKLVQEIETSGTRMPQSEREHYHARLVAAHDAHDMAAYRIALEGYVEGARLAYRKATGRQRKREEG*
Ga0126307_104437121	3300009789	Serpentine Soil	LKNDASAQRYGSKGVSPSEEWWNEPEAILLLERTGKLVQAIESLGKRMPQSARKLYHAHLVAAHDAQDMAAYRIALEEYAEGARKAHRTPKGE*
Ga0126307_106028301	3300009789	Serpentine Soil	MKTDTTPAQRYGRKGVSASEEQWNELEAVLLLQRAGKLVQEIETSGTRMAHSDRKLYHARLVAAHDAQDVAAYRVALEGYVEGARLAYRKATGRQRKREEG*
Ga0126307_106707551	3300009789	Serpentine Soil	LQRSAKLVQEIETSGTRMPQSEREQYHARLVAAHDARDMAAYRIALEGYAEGARLAYRKATGRQRKREEG*
Ga0126307_107792151	3300009789	Serpentine Soil	PAQRYGTKSVSASKERWDELEAILLLQRAGKLVEEIESSGTRMLHSDRKLYHARLVAAHDAQDVAAYRIALEGYVEGARLTYRKATGRQRKREDG*
Ga0126307_112403451	3300009789	Serpentine Soil	MSATEEWWNEPEAVLLLQRAGKLVQAIETSGKPMAQSARELYHARLLAAHDAQDMAAYRIALEQYAEGARKARRKPKGEQRKREEG*
Ga0126307_116955441	3300009789	Serpentine Soil	VSASEEQWNELEAVLLLQRAGKLVQEIESSGTRMPHSDRELYHARLVAAHDAQDVAAYRIALEGYVEGARLSYRKATGRQRKREEG*
Ga0126313_103918561	3300009840	Serpentine Soil	VSAFKEPWNEQEAILLLQRAAKSVQEIETSGTRMPHSERERYHARLVAAHDARDMAAYRIALEGYAEGARKAYRKTKGERQKREQG*
Ga0126313_105163461	3300009840	Serpentine Soil	SASKERWNEQEAILLLQRAAKVVQEIETSGTRMPHSEREHYHARLVAAHDAHDMAAYRIALEGYVEGARLAYRKATGRQRKREEG*
Ga0126313_105628881	3300009840	Serpentine Soil	MKTDTTPAQRYGRKGVSASEEQWNELEAVLLLQRAGKLVQEIESSGTRMAHSDRKLYHARLVAAHDAQDVAAYRVALEGYVEGARLAYRKATGRQRKREEG*
Ga0126313_107557941	3300009840	Serpentine Soil	KSVSASKERWNEQEAILLLQRAAKSVQVIETSGTRMPQSEREQYHARLVAAHDARDMAAYRIALEGYAEGARKAYRKRKGVRRKREEG*
Ga0126313_116795941	3300009840	Serpentine Soil	VSASKEPWNEQEAILLLQRAAKSVQEIETSGTRMPHSEREQYHARLVAAHDARDMAAYRIALEGYAEGARKAYRKTKGVR
Ga0126313_118411101	3300009840	Serpentine Soil	VSASKERWNEEEAILLLQRAAKSVQVIETSGTRMPHSERERYHTRLVAAHDARDMAAYRIALEGYAEGARKAYRKTKGVRRKHEEG*
Ga0126305_102457211	3300010036	Serpentine Soil	VSASKELWNEQEAILLLQRAAKSVQEIETSGTRMPHSEREQYHARLVAAHDARDMAAYRIALEGYAEGARLAYRKATGRQRKREEG*
Ga0126305_104073341	3300010036	Serpentine Soil	MLNDRGKKGMSASEEWWNEPEAVLLLQRAGKLVQAIETSGKPMAQSARELYHARLLAAHDAQDMAAYRIALDEYVEGARKAHREPKGEQRKREEG*
Ga0126305_105963851	3300010036	Serpentine Soil	VSASKERWNEQEAILLLQRAAKLVQEIETSGTQMPHSERERYHARLVAAHDARDMAAYRIALEGYAEGARKAYRKTKGVRRKREEG*
Ga0126305_108402061	3300010036	Serpentine Soil	MLLLNRYGRKSVSASKELWNEQEAILLLERAAKSVQVIETSGTRMPQSEREQYHARLVAAHDARDMAAYRIALEGYAEGARKAYRKTKGVRRKRE
Ga0126305_109110351	3300010036	Serpentine Soil	VSASKERWDELEAILLLQRAAKSVQEIETSGTRMPQSEREQYHARLVAAHDARDMAAYRIALEGYAQGARKAYRKTKG
Ga0126304_100788991	3300010037	Serpentine Soil	VSASKERWNEQEAILLLERAAKSVQVIETSGTRMPQSEREQYHARLVAAHDARDMAAYRIALEGYAEGARKAY
Ga0126304_103346791	3300010037	Serpentine Soil	VNASQERWSEQEAIVLLQRAGKLVEVLEAAGVRMPQSEREQCHARLLAAHDAQDMAAYRIALKAYTETAREAYRKAKKGVKHEER*
Ga0126304_103876461	3300010037	Serpentine Soil	RKRGRKSVSASKERWNEQEAILLLQRAAKSVQVIETSGTRMPHSEREQYHARLVAAHDARDMAAYRIALEGYAEGARLAYRKATGRQRKREEG*
Ga0126304_103959112	3300010037	Serpentine Soil	VSASKERWNEQEAILLLQRAAKLVQEIETSGTQMPHSERERYHARLVAAPDAHDMAAYRIALEGYAEGARKAYRKTKGVRRKREEG*
Ga0126304_104294591	3300010037	Serpentine Soil	MSATEEWWNEPEAVLLLQRAGKLVQAIETSGKPMAQSARELYHARLLAAHDAQDMAAYRIALEEYVEGARKAHHKLKGERKREEG*
Ga0126304_106008201	3300010037	Serpentine Soil	MSATEEWWNEPEAVLLLQRAGKLVQAIESLGKPMAQSARELYHARLVAAHDAQDVAAYRIALEGYVEGARLSYRKATGRQRKRQEG*
Ga0126304_107617092	3300010037	Serpentine Soil	VSASKERWNEEEAILLLQRSAKLVQEIETSGTQMPQSEREQYHARLVAAHDARDMAAYRIALEGYAEGARKAYRKTKGVRRKREEG*
Ga0126315_103443441	3300010038	Serpentine Soil	VSAFKEPWNEQEAILLLQRAAKSVQEIETSGTRMPHSERERYHARLVAAHDARDMAAYRIALEGYAEGARKAYRKTKGVRRKREEG*
Ga0126315_103917231	3300010038	Serpentine Soil	VSASKERWNELEAILLLQRSAKLVQEIETSGTRMPQSEREQYHARLVAAHDARDMAAYRIALEGYAEGARKAYRKTKGVRRKREEG*
Ga0126315_106014551	3300010038	Serpentine Soil	VSASKERWNEQEAILLLQRAGKLVQVIETSGTRMPQSEREHYHARLVAAHDARDMAAYRIALEGYAEGARLAYRKATGRQRKREEG*
Ga0126315_109242771	3300010038	Serpentine Soil	VSASKERWNEQEAILLLQRSAKLVQEIETSGTRMPQSEREQYHARLVAAHDARDMAAYRIALEGYAEGARKAYRKRKGVRRKREEG*
Ga0126309_100360884	3300010039	Serpentine Soil	VSASEQRWNELEAVLLLQRAGKLVQEIESSGTRMPHRDRKLYHDRLVAAHDAQDVAAYRSALNGYVAGARLSYRKATGRQRKREEG*
Ga0126309_100509122	3300010039	Serpentine Soil	VSASEEQWNELEAVLLLQRAGKLVQAIESSGTRMPHSDRKLYHARLVAAHDAQDVAAYRSAVEGYVEGARMSYRKATGRQGKREEG*
Ga0126309_100769852	3300010039	Serpentine Soil	VSASKERWNEQEAILLLQRAAKSVQVIETSGTRMPHSEREQYHARLVAAHDARDMAAYRIALEGYAEGARKAYRKTKGVRRKREEE*
Ga0126309_101201554	3300010039	Serpentine Soil	VSASEERWSEQEAIVLLQRAGKLVEVLEAAGVRMPQSEREQCHARLLAAHDAQDMAAYRIALKAYTETAREAYRKAKKGVKHEER*
Ga0126309_106215521	3300010039	Serpentine Soil	VGATKERWNEQEAILLLQGAAKLVQEIETSGTRMPQSEREQYHARLVAAHDARDMAAYRIALEGYAQGARKAYRKMKPGRRKREEG*
Ga0126309_106330141	3300010039	Serpentine Soil	RVKSKKEMRTDTTPAQRYGRKGVSTSEEQWNELEAVLLLQRAGKLVQEIESSGTRMPHSDRELYHARLVAAHDAQDVAAYRIALEGYVEGARLSYRKATGRQRKREEG*
Ga0126309_109768131	3300010039	Serpentine Soil	MKTDTTPAQRYGRKGVSASEEQWNELEAVLLLQRAGKLVQEIETSGTRMSHSDRKLYHARLVAAHDAQDVAAYRVALEGYVEGARLAYRKATGRQRKREEG*
Ga0126308_103891901	3300010040	Serpentine Soil	EKKGTKSVSASKERWNEQEAILLLRRAAKLVQVIETSGTQMPHSEREQYHARLVAAHDARDMAAYRIALEGYAEGARLAYRKATGRQRKREEG*
Ga0126308_103929002	3300010040	Serpentine Soil	MSATEEWWNEPEAVLLLQRAGKLVQAIETSGKPMAQSARELYHARLLAAHDAQDMAAYRIALEQYAEGARKARRKPKGERKREEG*
Ga0126308_104405271	3300010040	Serpentine Soil	TDTTPAQRYGRKGVSASEEQWNELEAVLLLQRAGKLVQEIETSGTRMLHSDRKLYHARLVAAHDAQDVAAYRVALEGYVEGARLAYRKATGRQRKREEG*
Ga0126308_104406981	3300010040	Serpentine Soil	VSASKEPWNEQEAILLLQRAAKSVQEIETSGTRMPHSEREQYHARLVAAHDARDMAAYRIALEGYAEGARKAYRKTKGVRRKREEG*
Ga0126308_104704352	3300010040	Serpentine Soil	VSASQERWSEQEAIVLLQRAGKLVEVLEAAGVRMPQSEREQCHARLLAAHDAQDMAAYRIALKGYTETAREAYRKAKKGVKHEER*
Ga0126308_110116801	3300010040	Serpentine Soil	KERWNEQEAILLLQGAAKLVQEFETPGTRMPHSEREQYHARLVAAHDARDMAAYRIALEGYAQGARKAYRKMKPGRRKREEG*
Ga0126312_100682151	3300010041	Serpentine Soil	VSASEEQWNELEAVLLLQRAGKLVQEIESSGTRMAHSDRKLYHARLVAAHDAQDVAAYRVALEGYVE
Ga0126312_104301453	3300010041	Serpentine Soil	VSASQERWSEQEAIVLLQRAGKLVEVLEAAGVRMPQSEREQYHARLLAAHDAQDMAAYRIALKGYTETAREAYRKAKKGVKYEER*
Ga0126312_108456091	3300010041	Serpentine Soil	KEPWNEQEAILLLQRAAKSVQEIETSGTRMPHSERERYHARLVAAHDARDMAAYRIALEGYAEGARKAYRKTKGVRRKREEE*
Ga0126312_112462051	3300010041	Serpentine Soil	VSASKERWNEQEAILLLQRSAKLVQEIETSGTQMPHSEREHYHARLVAAHDAQDMAAYRIALEGYAEGARKAYRKTKGVRRKREEG*
Ga0126312_113304741	3300010041	Serpentine Soil	VSASKERWNEQEAILLLQRAAKLVQEIETSGTRMPQSEREQYHARLVAAHDAHDMAAYRIALEGYAEGARKAYRKTK
Ga0126314_100033241	3300010042	Serpentine Soil	VSASKERWNEQEAILLLQRAAKVVQEIETSGTRMPHSEREHYHARLVAAHDAHDMAAYRIALEGYVEGARLAYRKATGRQRKREEG*
Ga0126314_102016612	3300010042	Serpentine Soil	VSASKEPWNEQEAILLLRRAAKLVQVIETSGTQMPHSEREQYHARLVAAHDARDMAAYRIALEGYAEGARLAYRKATGRQRKREEG*
Ga0126314_103246951	3300010042	Serpentine Soil	VSASKERWNEQEAILLLQRSAKLVHEIETSGTQMPHSEREQYHACLVAAHDAQDMAAYRIALEGYAEGARKAYRKTKGVRRKREEG*
Ga0126314_103384101	3300010042	Serpentine Soil	ERWSEQEAIVLLQRAGKLVEVLEAAGVRMPQSEREQYHARLLAAHDAQDMAAYRIALKAYTETAREAYRKAKKGVKHEER*
Ga0126314_105186492	3300010042	Serpentine Soil	MLLLNRYGRKSVSASKERWNEQEAILLLQRAGKLVQEIETSGTRMPHSEREHYHARLVAAHDAHDMAAYRIALEGYVEGARL
Ga0126314_114962421	3300010042	Serpentine Soil	VSASKERWNEQEAILLLQRAGKLVQEIETSGTRMPQSEREHYHARLVAAHDAHDMAAYRIALEGYVEGAR
Ga0126310_102769882	3300010044	Serpentine Soil	VSASKEPWNEQEAILLLQRAAKSVQEIETSGTRMPHSERERYHARLVAAHDARDMAAYRIALEGYAEGARKAYRKTKGERQKREQG*
Ga0126310_102772882	3300010044	Serpentine Soil	VSASKERWDELEAILLLQRAAKSVQEIETSGTRMPQSEREQYHARLVAAHDARDMAAYRIALEGYAQGARKAYRK
Ga0126310_102821051	3300010044	Serpentine Soil	VSASQERWSEQEAIVLLQRAGKLVKVFETAGVRMPQSEREQCHARLLAAHDAQDMAAYRIALKAYTETAREAYRKAKKGVKHEQR*
Ga0126310_107742271	3300010044	Serpentine Soil	VSASEEQWNELEAVLLLQRAGKLVEEIESSGTRMPHSDRKLYHARLVAAHDAQDMAAYRIALEGYVEGARMSYRKATGRQQKREEG*
Ga0126310_108163681	3300010044	Serpentine Soil	TTPAQRYGRKGVSASEEQWNELEAVLLLQRAGKLVQEIETSGTRMLHSDRKLYHARLVAAHDAQDVAAYRVALEGYVEGARLAYRKATGRQRKREEG*
Ga0126310_114734411	3300010044	Serpentine Soil	MKTDTTPAQRYGRKGVSASEEQWNELEAVLLLQRAGKLVQEIESSGTRMPHSNRKLYHARLVAAHDAHDMAAYRVALEGYVEGARLAYRKATGRQRKREEG*
Ga0126310_118282502	3300010044	Serpentine Soil	MSATEEWWNEPEAVLLLERAGKLVQAIETSGKPMPQSARELYHARLVAAHDAQDIAAYRFALEEYVEGARKAHRKRKGGAKA*
Ga0126311_100647771	3300010045	Serpentine Soil	VSASKERWDELEAILLLQRAAKSVQEIETSGTRMPQSEREQYHARLVAAHDARDMAAYRIALEGYAQGARKAYRKTKGVRRKREEG*
Ga0126311_100724441	3300010045	Serpentine Soil	VSASKERWNEQEAILLLQRVAKSVQVIETSGTRMPHSEREQYHARLVAAHDAHDMAAYRIALEGYAEGARKAYRKTKGVRRKREEG*
Ga0126311_100758583	3300010045	Serpentine Soil	VNASQERWSEQEAIVLLQRAGKLVEVLEAAGVRMPQSEREQYHARLLAAHDAQDMAAYRIALKAYTETAREAYRKAKKGVKHEER*
Ga0126311_101047632	3300010045	Serpentine Soil	MKTDTTPAQRYGRKGVSTSEEQWNELEAVLLLQRAGRLVQEIESSGTRMLHSDRKLYHARLVAAHDAQDMAAYRIALEGYVEGARMSYRKATVRQQKREEG*
Ga0126311_104638371	3300010045	Serpentine Soil	CVQRVKSKNGIKNDALAQRYGRKCVSAFKEPWNEQEAILLLQRAAKSVQEIETSGTRMPHSERERYHARLVAAHDARDMAAYRIALEGYAEGARKAYRKTKGERQKREQG*
Ga0126311_117749601	3300010045	Serpentine Soil	VSYYAPTKHQQYGRKSVGATKERWNEQEAILLLQGAAKLVQEIETSGTRMPHSEREQYHARLVAAHDARDMAAYRIALEGYAQGARKAYRKMKPGRRKREEG*
Ga0126306_100804892	3300010166	Serpentine Soil	MSASEEWWNEPEAVLLLQRAGKLVQAIETSGKPMAQSARELYHARLLAAHDAQDMAAYRIALDEYVEGARKAHREPKGEQRKREEG*
Ga0126306_102554952	3300010166	Serpentine Soil	VSASQERWSEQEAIVLLQRAGKLVEVLEAAGVRMPQSEREQCHARLLAAHDAQDMAAYRIALKAYTETAREAYRKAKKGVKHEER*
Ga0126306_111164881	3300010166	Serpentine Soil	VSASEEQWNELEAVLLLQRAGKLVQEIESSGTRMPHSDRELYHARLVAAHDAQDVAAYRVALEGYVEGVRLAYRKATGR
Ga0058701_106566521	3300010395	Agave	NEQEAILLLQGAAKLVQEIETSGTRMPHSEREKYHARLVAAHDAHDMAAYRIALEGYVEGARLAYRKATGRQRKREEG*
Ga0182000_101866172	3300014487	Soil	MKTDTTPAQPYGRKGVSASEEQWNELEAVLLLQRAGKLVQEIESSGTRMPHSDRKLYHARLVAAHDAQDVAAYRVALEGYVEGARLAYRKATGRQRKREEG*
Ga0182000_102191921	3300014487	Soil	VSASEEQWNELEAVLLLQRAGKLVQEIESSGTRMAHSDRKLYHARLVAAHDAQDVTAYRVALEGYVEGARLAYRKATGRQRKREEG*
Ga0182001_100071795	3300014488	Soil	VSASQERWSEQEAIVLLQRAGKLVEVLEAAGVRMPQSEREQYHARLLAAHDAQDMAAYRIALKGYTETAREAYRKAKKGVKHEER*
Ga0182001_100241211	3300014488	Soil	MKSDTPTQRHGRKGVSASEQRWNELEAVLLLQRAGKLVHEIESSGKRMPHRDRKLYHARLVAAHDAQDVAAYRSALEGYVEGARMSYRKATGRQHKREEG*
Ga0182001_100409301	3300014488	Soil	VSASKEPWNEQEAILLLQRAAKLVQEIETSGTRMPHSEREQYHARLVAAHDARDVAAYRIALEGYAEGARKAYRKTKG
Ga0182001_101936512	3300014488	Soil	VGATKERWNEQEAILLLQGAAKLVHGIETSGTRMPHSEREQYHARLVAAHDARDMAAYRIALEGYAQGARKAYRKMKPGRRKREEG*
Ga0182001_102497902	3300014488	Soil	GVSASEEQWNELEAVLLLQRAGKLVQEIESSGTRMPHSEREHYHARLVAAHDAHDMAAYRIALEGYVEGARLAYRKATGRQRKREEG*
Ga0182001_104860331	3300014488	Soil	MKTDTTPAQRYGRKGVSASEEQWNELEAVLLLQRAGKLVQEIESSGTRMPHSDRKLYHARLVAAHDAQDVAAYRVALEGYVE
Ga0190269_104446562	3300018465	Soil	MKTDTTPAQRYGRKGVSASEEQWNELEAVLLLQRAGKLVQEIESSGTRMPHSDRKLYHARLVAAHDAQDVAAYRVALEGYVEGARLAYRKATGRQRKREEG
Ga0190269_109580081	3300018465	Soil	TQQYGRKSVGATNERWNEQEAILLLQGAAKLVQEIETSGTRMPHSEREQYHARLVAAHDARDMAAYRIALEGYAQGARKAYRKTKGVRRKREEG
Ga0066662_114442422	3300018468	Grasslands Soil	NELEAVVLLERTGKLVKGLEATGARMAQSKRERYHARLVAAHDARDMAAYRIALKEYGEGAREAYRKAKGGRQRRLD
Ga0066662_130138081	3300018468	Grasslands Soil	VSASKERWNEPEAILLLQRTGKLVEGLEASGARMAQSNRERYHARLVAAHDAQDMAAYRIALKEYREGAREAYRKAKGGRQRRLD
Ga0190267_107683251	3300019767	Soil	MKTDTTPAQRYGRKGVSASEEQWNELEAVLLLQRAGKLVQEIESSGTRMPHSDRKLYHARLVAAHDAQDVTAYRVALEGYVEGARLAYRKATGRQRKREEG
Ga0213875_100830751	3300021388	Plant Roots	RGGVRAPNERWNEEEAIVLLQDVGTLVVRLEATGARMSQEEREQCHARLLTAHDAKDMTAYRNALEGYAEEARKAYRKAKGRRRPN
Ga0209461_101723111	3300027750	Agave	MSTSEERWSEQEAIVLLQRAGKLVKVFETAGVRMPQSEREQYHARLLAAHDAQDMAAYRIALKAYTETAREAYRKAKKGVKHEER
Ga0209796_100522702	3300027766	Agave	VSASKERWNEQEAILLLQRAAKSVQEIETSGARMPHSEREHYHARLVAAHDAHDMAAYRIALEGYVEGARLAYRKATGRQRKREEG
Ga0209796_101271182	3300027766	Agave	VSVPEDRWNEPEAIVLLQRAGKLVDGLEATGARMPQGTRELCHARLVAAHDARDMAAYRIALKGYAEEARKAYRKAKGKRRKREEG
Ga0209796_101893901	3300027766	Agave	KSVSASKERWNEEEAILLLQRAAKSVQEIETSGTRMPHSEREQYHARLVAAHDAHDMAAYRIALEGYAQGARKAYRKMKPGRRKREEG
Ga0209574_101921151	3300027809	Agave	VSASQERWSEQEAIVLLQRAGKLVEVLEAAGVRMPQSEREQYHARLLAAHDAQDMAAYRIALKAYTETAREAYRKAKKGVKHEER
Ga0268240_100266902	3300030496	Soil	VSASEEQWNELEAVLLLQRAGKLVQEIESSGTRMPHSDRKLYHARLVAAHDAQDVAAYRVALEGYVEGARLAYRKATGRQRKREEG
Ga0268243_10823131	3300030510	Soil	VGATNERWNEQEAILLLQGAAKLVQEIETSGTRMPHSEREQYHARLVAAHDARDMAAYRIALEGYAQGARKAYRKMKPGRRKREEG
Ga0268243_10848811	3300030510	Soil	VSASKERWNEQEAILLLQRAAKSVQEIETSGARMPLSEREHYHARLVAAHDAHDMAAYRIALEGYVEGARLAYRKATGRQRKREEG
Ga0268242_10510711	3300030513	Soil	VSASQERWSEQEAIVLLQRAGKLVEVLEAAGVRMPQSEREQYHARLLAAHDAQDMAAYRIALKGYTETAREAYRKAKKGVKHEER
Ga0268242_11209521	3300030513	Soil	VSASKERWNEQEAILLLQRAAKSVQEIETSGTRMPHSEREQYHARLVAAHDAHDMAAYRIALEGYAQGARKAYRKMKPGRRKREEG
Ga0268254_102273281	3300030515	Agave	AILLLQRAAKSVQEIETSGARMPHSEREHYHARLVAAHDAHDMAAYRIALEGYVEGARLAYRKATGRQRKREEG
Ga0307416_1030306941	3300032002	Rhizosphere	VSASKERWNEQEAILLLQRAAKLVQEIETSGTRMPHSEREHYHARLVAAHDARDMAAYRIALEGYAEGARKAYRKTKGVRRKREEG
Ga0268251_101425342	3300032159	Agave	VSASEERWSEQEAIVLLQRAGKLVEVLEAAGVRMPQSEREQYHARLLAAHDAQDMAAYRIALKAYTETAREAYRKAKKGVKHEER
Ga0268251_103544351	3300032159	Agave	METDTTPAQPYGRKGVSASEEQWNELEAVLLLQRAGKLVQEIESSGTRMPHSDRKLYHARLVAAHDAQDVAAYRVALEGYVEGARLAYRKATGRQRKREEG
Ga0334931_178528_131_391	3300034377	Sub-Biocrust Soil	VSASKERWNEQEAILLLQRAGKLVQEIETSGTRMPHSEREHYHARLVAAHDARDMAAYRIALEGYVEGARLAYRKATGRQRKREEG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F086455

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences