Metagenome Family F086519

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086519
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	42 residues
Representative Sequence	MMADRSLGLVFWRVLDALDYWLTLTRLRILDALCGEGVEITADE
Number of Associated Samples	64
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	52.73 %
% of genes near scaffold ends (potentially truncated)	40.00 %
% of genes from short scaffolds (< 2000 bps)	93.64 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (41.818 % of family members)
Environment Ontology (ENVO)	Unclassified (54.545 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.364 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.17% β-sheet: 0.00% Coil/Unstructured: 45.83%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF02586	SRAP	2.73
PF13404	HTH_AsnC-type	0.91
PF04964	Flp_Fap	0.91
PF00486	Trans_reg_C	0.91
PF12587	DUF3761	0.91
PF01695	IstB_IS21	0.91
PF04392	ABC_sub_bind	0.91
PF06627	DUF1153	0.91
PF14534	DUF4440	0.91
PF00872	Transposase_mut	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	2.73
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.91
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.91
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.91
COG3847	Flp pilus assembly protein, pilin Flp	Extracellular structures [W]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	27.27 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	21.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	27.27 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	13.64 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	27.27 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	7.27 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4.55 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.91 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	27.27 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.27 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	3.64 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.91 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.91 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	27.27 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.27 %
Undibacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Undibacterium	3.64 %
Polynucleobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter	0.91 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.91 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	27.27 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.27 %
unclassified Undibacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Undibacterium → unclassified Undibacterium	3.64 %
Polynucleobacter paneuropaeus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter → Polynucleobacter paneuropaeus	0.91 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.91 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	27.27 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.27 %
Undibacterium sp. KW1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Undibacterium → unclassified Undibacterium → Undibacterium sp. KW1	3.64 %
Polynucleobacter paneuropaeus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter → Polynucleobacter paneuropaeus	0.91 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.91 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2040502001\|FACENC_GAMC6GA01AIFIZ	Not Available	516	Open in IMG/M
3300005332\|Ga0066388_102637407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	916	Open in IMG/M
3300005332\|Ga0066388_102805778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	890	Open in IMG/M
3300005332\|Ga0066388_102844720	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	884	Open in IMG/M
3300005332\|Ga0066388_105709338	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	630	Open in IMG/M
3300005439\|Ga0070711_101542641	Not Available	580	Open in IMG/M
3300005439\|Ga0070711_101921118	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	520	Open in IMG/M
3300005764\|Ga0066903_100763397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1720	Open in IMG/M
3300005764\|Ga0066903_100874640	Not Available	1621	Open in IMG/M
3300005764\|Ga0066903_101320134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1349	Open in IMG/M
3300005764\|Ga0066903_105503481	Not Available	668	Open in IMG/M
3300009098\|Ga0105245_11091689	Not Available	844	Open in IMG/M
3300010046\|Ga0126384_10320770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1281	Open in IMG/M
3300010046\|Ga0126384_11256008	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	685	Open in IMG/M
3300010046\|Ga0126384_11822944	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	578	Open in IMG/M
3300010048\|Ga0126373_12045959	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	635	Open in IMG/M
3300010048\|Ga0126373_12873159	Not Available	537	Open in IMG/M
3300010048\|Ga0126373_13287336	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	503	Open in IMG/M
3300010358\|Ga0126370_10665321	Not Available	909	Open in IMG/M
3300010359\|Ga0126376_11443369	Not Available	714	Open in IMG/M
3300010360\|Ga0126372_11882781	Not Available	643	Open in IMG/M
3300010361\|Ga0126378_10858478	Not Available	1015	Open in IMG/M
3300010361\|Ga0126378_11521969	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	759	Open in IMG/M
3300010361\|Ga0126378_11543144	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	753	Open in IMG/M
3300010361\|Ga0126378_12872690	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	550	Open in IMG/M
3300010376\|Ga0126381_100312253	All Organisms → cellular organisms → Bacteria → Proteobacteria	2157	Open in IMG/M
3300010376\|Ga0126381_100832040	Not Available	1326	Open in IMG/M
3300010376\|Ga0126381_101090318	Not Available	1153	Open in IMG/M
3300010376\|Ga0126381_101504278	Not Available	973	Open in IMG/M
3300010376\|Ga0126381_103473106	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	619	Open in IMG/M
3300010376\|Ga0126381_105022052	Not Available	507	Open in IMG/M
3300010398\|Ga0126383_11009152	Not Available	921	Open in IMG/M
3300012971\|Ga0126369_11104213	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	882	Open in IMG/M
3300016270\|Ga0182036_10408847	Not Available	1059	Open in IMG/M
3300016270\|Ga0182036_10764967	Not Available	785	Open in IMG/M
3300016294\|Ga0182041_10138042	Not Available	1860	Open in IMG/M
3300016294\|Ga0182041_10175962	Not Available	1680	Open in IMG/M
3300016357\|Ga0182032_10589995	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	923	Open in IMG/M
3300016357\|Ga0182032_11574812	Not Available	571	Open in IMG/M
3300016357\|Ga0182032_11733425	Not Available	545	Open in IMG/M
3300016371\|Ga0182034_11251202	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	646	Open in IMG/M
3300016404\|Ga0182037_10570839	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	957	Open in IMG/M
3300016422\|Ga0182039_10009825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5500	Open in IMG/M
3300016422\|Ga0182039_10698741	Not Available	894	Open in IMG/M
3300016422\|Ga0182039_11785640	Not Available	563	Open in IMG/M
3300020579\|Ga0210407_10960083	Not Available	653	Open in IMG/M
3300020579\|Ga0210407_11385285	Not Available	522	Open in IMG/M
3300020580\|Ga0210403_10157028	Not Available	1861	Open in IMG/M
3300020580\|Ga0210403_11477876	Not Available	512	Open in IMG/M
3300021168\|Ga0210406_11316121	Not Available	520	Open in IMG/M
3300021178\|Ga0210408_10658152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Undibacterium → unclassified Undibacterium → Undibacterium sp. KW1	827	Open in IMG/M
3300021405\|Ga0210387_10241557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Undibacterium → unclassified Undibacterium → Undibacterium sp. KW1	1578	Open in IMG/M
3300021476\|Ga0187846_10000073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	58100	Open in IMG/M
3300021560\|Ga0126371_10381294	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1549	Open in IMG/M
3300021560\|Ga0126371_10725559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1141	Open in IMG/M
3300021560\|Ga0126371_11093854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter → Polynucleobacter paneuropaeus	936	Open in IMG/M
3300021560\|Ga0126371_11212521	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	891	Open in IMG/M
3300031057\|Ga0170834_106565743	Not Available	671	Open in IMG/M
3300031057\|Ga0170834_107719290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Undibacterium → unclassified Undibacterium → Undibacterium sp. KW1	647	Open in IMG/M
3300031128\|Ga0170823_12419960	Not Available	530	Open in IMG/M
3300031231\|Ga0170824_112306328	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	789	Open in IMG/M
3300031543\|Ga0318516_10023950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3156	Open in IMG/M
3300031543\|Ga0318516_10234538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1061	Open in IMG/M
3300031543\|Ga0318516_10596425	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	631	Open in IMG/M
3300031543\|Ga0318516_10844485	Not Available	516	Open in IMG/M
3300031545\|Ga0318541_10008054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4604	Open in IMG/M
3300031545\|Ga0318541_10132377	Not Available	1360	Open in IMG/M
3300031545\|Ga0318541_10180565	Not Available	1165	Open in IMG/M
3300031561\|Ga0318528_10171123	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1160	Open in IMG/M
3300031572\|Ga0318515_10215926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1029	Open in IMG/M
3300031680\|Ga0318574_10397289	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	805	Open in IMG/M
3300031680\|Ga0318574_10434265	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	768	Open in IMG/M
3300031682\|Ga0318560_10503958	Not Available	656	Open in IMG/M
3300031713\|Ga0318496_10159100	Not Available	1235	Open in IMG/M
3300031713\|Ga0318496_10208519	Not Available	1075	Open in IMG/M
3300031719\|Ga0306917_10232566	Not Available	1407	Open in IMG/M
3300031719\|Ga0306917_11208060	All Organisms → cellular organisms → Bacteria → Proteobacteria	587	Open in IMG/M
3300031736\|Ga0318501_10149580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Undibacterium → unclassified Undibacterium → Undibacterium sp. KW1	1200	Open in IMG/M
3300031736\|Ga0318501_10691330	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	562	Open in IMG/M
3300031747\|Ga0318502_10130799	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1418	Open in IMG/M
3300031768\|Ga0318509_10249324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	991	Open in IMG/M
3300031770\|Ga0318521_10776997	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	583	Open in IMG/M
3300031771\|Ga0318546_10299387	Not Available	1113	Open in IMG/M
3300031795\|Ga0318557_10250728	Not Available	811	Open in IMG/M
3300031805\|Ga0318497_10428846	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	740	Open in IMG/M
3300031821\|Ga0318567_10396606	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	782	Open in IMG/M
3300031890\|Ga0306925_11295685	Not Available	724	Open in IMG/M
3300031910\|Ga0306923_10757341	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1076	Open in IMG/M
3300031910\|Ga0306923_12329127	Not Available	533	Open in IMG/M
3300031912\|Ga0306921_11141415	Not Available	871	Open in IMG/M
3300031912\|Ga0306921_12046656	Not Available	608	Open in IMG/M
3300031941\|Ga0310912_10030466	All Organisms → cellular organisms → Bacteria → Proteobacteria	3660	Open in IMG/M
3300031941\|Ga0310912_10894251	Not Available	684	Open in IMG/M
3300031942\|Ga0310916_10774512	Not Available	809	Open in IMG/M
3300031942\|Ga0310916_10895856	Not Available	744	Open in IMG/M
3300031942\|Ga0310916_11322004	Not Available	593	Open in IMG/M
3300031959\|Ga0318530_10149470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	948	Open in IMG/M
3300032039\|Ga0318559_10476156	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	583	Open in IMG/M
3300032041\|Ga0318549_10552721	Not Available	517	Open in IMG/M
3300032043\|Ga0318556_10320793	Not Available	810	Open in IMG/M
3300032044\|Ga0318558_10382486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	700	Open in IMG/M
3300032051\|Ga0318532_10124470	Not Available	913	Open in IMG/M
3300032054\|Ga0318570_10492616	Not Available	559	Open in IMG/M
3300032059\|Ga0318533_10039051	Not Available	3117	Open in IMG/M
3300032059\|Ga0318533_10485844	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300032063\|Ga0318504_10293567	Not Available	769	Open in IMG/M
3300032076\|Ga0306924_10297274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1853	Open in IMG/M
3300032180\|Ga0307471_104206472	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	508	Open in IMG/M
3300032261\|Ga0306920_102620513	Not Available	691	Open in IMG/M
3300033289\|Ga0310914_11718881	Not Available	531	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.09%
Host-Associated	Host-Associated	0.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.09%
Plants	Host-Associated → Plants	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.18%
Cave	Environmental → Terrestrial → Cave	0.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	89.09%
Loam	Environmental → Terrestrial → Soil → Loam	9.09%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	65.45%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.82%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	41.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	22.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.27%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.64%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.91%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.91%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2040502001	Soil microbial communities from sample at FACE Site 2 North Carolina CO2+	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACENCE_5953800	2040502001	Soil	VFWRVLDALDYWFTLTRLRILDALCGAAVEITADE
Ga0066388_1026374071	3300005332	Tropical Forest Soil	MADGFLALVFWRVLDALDYWLALTQLRILDALCGAELETPADE*
Ga0066388_1028057781	3300005332	Tropical Forest Soil	RKARRSMMADGLLVLVFWRVLDALDYRLTLTRLRILDALW*
Ga0066388_1028447202	3300005332	Tropical Forest Soil	MMADRFLGLVFWRVLDALDYWLTLTRLRILDALCGEGVEITADE*
Ga0066388_1057093381	3300005332	Tropical Forest Soil	DRPLGLVFWRVLDALDCWLTLTRLRILDALCGEGVEVTFRE*
Ga0070711_1015426411	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MMMADRPLGLVFWRVLDALDYWLTLTRLRILDGLCGAELMTPADE*
Ga0070711_1019211181	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MMAGRPLGLVFWRVLDALGYWLTLARLRILDALCGDGVEIIGDD*
Ga0066903_1007633973	3300005764	Tropical Forest Soil	MPNRSLGLVFWRVLDALDYWITLTRLRILDALCGEGVEITSGE*
Ga0066903_1008746402	3300005764	Tropical Forest Soil	MMAVRIVLWRVLDALDYWLTVTRLRILDALCGEGLEVTFRE*
Ga0066903_1013201343	3300005764	Tropical Forest Soil	MMADRPFGLIFWRVLDALDYWLTLMRLRTLDALCGAELRTPADE*
Ga0066903_1055034812	3300005764	Tropical Forest Soil	MMADRSLGLVFWRVLDALDYWLTLTRLRILDALCREGVGITADE*
Ga0105245_110916891	3300009098	Miscanthus Rhizosphere	MMTDRPFGLVFWRVLDALDYWLTLTRLRILDALCGEGVEITADE*
Ga0126384_103207702	3300010046	Tropical Forest Soil	MPNRSLGLVFWRVLDALDYWLTLTRLRILDALCGEGVEITADE*
Ga0126384_112560082	3300010046	Tropical Forest Soil	MMADRPLGLVFWRMLDAFDYWLTLTRLRILDALCGEALEITAGD*
Ga0126384_118229442	3300010046	Tropical Forest Soil	MMAVKSLGLVFWRVLDVLDYWLTLTRLRILDALYGEGVEITARD*
Ga0126373_120459592	3300010048	Tropical Forest Soil	MMANRPLGLVFWRVLDALDYWLTLTQLRILDALCGEGVEIITDE*
Ga0126373_128731591	3300010048	Tropical Forest Soil	MMADRHLGLIFWRVLDALDYRLTLMRLRTLDALCGAELRKPADE*
Ga0126373_132873361	3300010048	Tropical Forest Soil	MMADRFLGLVFWRVLDALDYWLTLTRLRILDALCGEGVDIIADE*
Ga0126370_106653213	3300010358	Tropical Forest Soil	LVFWRVLDALDYWLTLTRLRILDGLCGAELMTPADE*
Ga0126376_114433691	3300010359	Tropical Forest Soil	MMADKFLRLVFWRVLDALDYWLTLTQLRILDALCGEGVEITTDE*
Ga0126372_118827811	3300010360	Tropical Forest Soil	LGLVFWRVLDALNHWLTLTRLRILDALCGEGVEITSGE*
Ga0126378_108584783	3300010361	Tropical Forest Soil	MMANRSLGLVFWWVLDALDYWLTLTQLRILDALCGERVEITTDE*
Ga0126378_115219692	3300010361	Tropical Forest Soil	MMANRPLGLVFWRVLDALDYWLTLTQLRILDALCGGDNY*
Ga0126378_115431441	3300010361	Tropical Forest Soil	MMADRPLGLLFWRVLDALEYWQTLTQLRILDALCGEGVEITTDE*
Ga0126378_128726901	3300010361	Tropical Forest Soil	MMADRSLGLVFWRVLDALDYWFTLTRLRILDALCGEGVEIKSGE*
Ga0126381_1003122531	3300010376	Tropical Forest Soil	MMADKPLELVFWRVLDAPDYWLTLTRLRILDALCGEGVEITANE*
Ga0126381_1008320402	3300010376	Tropical Forest Soil	MMADRPLRLVFWRVLDALEYWFILTQLRILDALCGEGIEIITDE*
Ga0126381_1010903183	3300010376	Tropical Forest Soil	MMADRPFGLVFWRVLDALDYWLTLTRLRILDGLCGAELMTPADE*
Ga0126381_1015042782	3300010376	Tropical Forest Soil	MMADKPLGLVFWQLLDALDYWLTLTRLRILDAPCGERLEITAGD*
Ga0126381_1034731061	3300010376	Tropical Forest Soil	MMADRPLGLLFWRVLDALEYWLTLTQLRILDALCGEGVEITTDE*
Ga0126381_1050220521	3300010376	Tropical Forest Soil	MMADKPLGLVFWRVLDALDYWLTLTRLRIQDALCREGVGITADE*
Ga0126383_110091521	3300010398	Tropical Forest Soil	MMADRPFGLIFWRVLDALDYWLTLMRLRTLDALCG
Ga0126369_111042133	3300012971	Tropical Forest Soil	MMADRSLGLVFWRVLDALDYWLTLTRLRILDALCGEGVEITADE*
Ga0182036_104088471	3300016270	Soil	MADRSLSLRLVFWRVLDALDYWLTLTQLRILDALCVEELKITADE
Ga0182036_107649671	3300016270	Soil	MMDDKSRRLVFWWVLDALDYWFTLTRLRILDALCCEG
Ga0182041_101380421	3300016294	Soil	MMDDKFRGLVFWRVLDALDYWLTVTRLRILDALCGEGAEIKTDE
Ga0182041_101759621	3300016294	Soil	MMADKSLGLVCWRVRDALDYWLTLTQLRILDALCGEG
Ga0182032_105899952	3300016357	Soil	MIANRSLGLVFWRVLVDYWLTLTQLRILDALCGEGIEITPDE
Ga0182032_115748122	3300016357	Soil	MMADRPFGLVFWRVLDALDYWLTLTRLRILDGLCGEKLMTPADE
Ga0182032_117334251	3300016357	Soil	MMDDKSRGLVFWRVLDALDYWLTLTQLRILDTLCGERVEITTDD
Ga0182034_112512022	3300016371	Soil	MMAVRIVLWRVLDALDYWLTLTRLRILDALCGEGVEITFRE
Ga0182037_105708392	3300016404	Soil	MMADKSLGLVFWRVLDALDYWLTLAQLRILDALCDEGIEMTTDE
Ga0182039_100098251	3300016422	Soil	MMADKSLGLVFWRVLDSLDYWLTLTQLRILDALCGEG
Ga0182039_106987412	3300016422	Soil	VSNPPLQRLPSMMADKSLRLVFWRVIDALDYWLTLAQLRILDALCGDGVEITTDD
Ga0182039_117856401	3300016422	Soil	NRSLGLVFWRVLDALDFWFTLAQLRMLDALCGEGLEITADD
Ga0210407_109600831	3300020579	Soil	MMADRPLGLVFWRVFDALDYWLTLTRLRILDALCGEGVEITADE
Ga0210407_113852851	3300020579	Soil	MMAHRPLGLVFWRVLDALDYWFTLTRLRILDALCGAAVQITADE
Ga0210403_101570284	3300020580	Soil	MMADRPLGLVFWRVLDALDYWLTLTRLRILDALCGEAVEINAD
Ga0210403_114778762	3300020580	Soil	MMADRPLWLGFWQVLDALDYWLTLTRLRLLDPLCAEGLEITADE
Ga0210406_113161212	3300021168	Soil	MMADRPLGFVFWRVLDALDYWLTLTRLRVLDALCGEGIEITADG
Ga0210408_106581521	3300021178	Soil	MMADGSLGRIFWRVLDVLDYWLTLTRLRILDALCGTELQTPGD
Ga0210387_102415574	3300021405	Soil	MMADRPLGLVFWRVLDALDYWLTLTRLRILDALCGAELQTPADE
Ga0187846_1000007332	3300021476	Biofilm	MMADRSLGLVFWRVLDALDYWLTLTRLRILDALCGAELHTPADE
Ga0126371_103812942	3300021560	Tropical Forest Soil	MMADGALGIVFWRVLDALDYWLTLTQLRILDALCGKGVEITTGD
Ga0126371_107255594	3300021560	Tropical Forest Soil	MMADRFLGLVSWRVLDALDYWLTLTRLRILDALCG
Ga0126371_110938541	3300021560	Tropical Forest Soil	LGLVLWRVLDALDYWLILTRLRVLDALCGEGVEIIADD
Ga0126371_112125211	3300021560	Tropical Forest Soil	MMAVRIVLWRVLDALDYWLTVTRLRILDALGGEGLEVTFRE
Ga0170834_1065657431	3300031057	Forest Soil	SMMANESIGLIFWRVLDVLDYWLTLTRLRILDALCGTELPGDE
Ga0170834_1077192902	3300031057	Forest Soil	MMADRPLGLVFWRVLDALDYWLTLTRLRILDALCGEGVEINADE
Ga0170823_124199601	3300031128	Forest Soil	LMMADGSLGLIFWRVLDVLDYWLTLTRLRILDALCGAELPTPADE
Ga0170824_1123063282	3300031231	Forest Soil	MMADRPLGLVFWRVLDALDYWLTLTRLRILDALCGEGVEVTADE
Ga0318516_100239501	3300031543	Soil	MADKSLGLVCWRVRDALDYWLTLTQLRILDALCGEGVEITTDE
Ga0318516_102345382	3300031543	Soil	MMDDKFRGLVFWRVLDALDYWLTVTRLRILDALCGEGVEIKTDE
Ga0318516_105964252	3300031543	Soil	MMADKSLGLVFWRVLDALDCWLTLTRLRILDAICGAELETPADD
Ga0318516_108444852	3300031543	Soil	MMADRPLGLVFWRVLDALDYWLTLTQLRILDVLCGEGVEITADE
Ga0318541_100080543	3300031545	Soil	MMADKSLGLVFWRVLDSLDYWLTLTQLRILDALCGEGVEITTDE
Ga0318541_101323772	3300031545	Soil	MMADKSLGLVCWRVRDALDYWLTLTQLRILDALCGEGVEITTD
Ga0318541_101805653	3300031545	Soil	MMDDKSRRLVFWWVLDALDYWFTLTRLRILDALCCEGV
Ga0318528_101711232	3300031561	Soil	MMDDKSRGLVFWRVLDALDYWLTLTQLRILDALCGRGVEITTDE
Ga0318515_102159261	3300031572	Soil	QSSTNSARSMTDDKSLGLVFWRVLDALDYWLTLTQLRILDALCGEGVEITTD
Ga0318574_103972893	3300031680	Soil	MMADKSLGLVFWRVLDALDCWLTLTGLRILDAICGAELET
Ga0318574_104342651	3300031680	Soil	MMDDKSRRLVFWWVLDALDYWFTLTRLRILDALCCEGVEITTDE
Ga0318560_105039582	3300031682	Soil	MMDDKSRGLVFWRVLDALDYWLTLTQLRILDALCGRGVE
Ga0318496_101591002	3300031713	Soil	MMADKSLGLVFWRVLDSLDYWLTLTQLRILDALCGEGVEITTD
Ga0318496_102085191	3300031713	Soil	MMDDKSRGLVFWRVLDALDYWLTLTQLRILDALCGRGVEI
Ga0306917_102325662	3300031719	Soil	MMADKSLGLVFWRVLDALDYWLTLAQLRILDALCDEGIEMT
Ga0306917_112080602	3300031719	Soil	MMADRSLRLVFWRVLDALDYWLTLTQLRILDALCGEGVGITADE
Ga0318501_101495803	3300031736	Soil	MMADKSLGLVCWRVRDALDYWLTLTQLRILDALCGEGVEITTDE
Ga0318501_106913301	3300031736	Soil	LVFWWVLDALDYWFTLTRLRILDALCCEGVEITTDE
Ga0318502_101307992	3300031747	Soil	MMADKSLGLVFWRVLDALDCWLTLTGLRILDAICGAELETPADD
Ga0318509_102493244	3300031768	Soil	RRLVFWWVLDALDYWFTLTRLRILDALCCEGVEITTDE
Ga0318521_107769972	3300031770	Soil	MMAVRIVLWRVLDYWLTLTRLRILDALCGEGVEITFRE
Ga0318546_102993873	3300031771	Soil	MMADRPLGLVFWRVLDALDYWLTLTQLRILDVLCGEGVE
Ga0318557_102507283	3300031795	Soil	VFWRVLDSLDYWLTLTQLRILDALCGEGVEITTDE
Ga0318497_104288463	3300031805	Soil	VLWRVLDALDYWLTLTRLRILDALCGEGVEITFRE
Ga0318567_103966062	3300031821	Soil	SMMDDKFRGLVFWRVLDALDYWLTVTRLRILDALCGEGVEIKTDE
Ga0306925_112956852	3300031890	Soil	MADRSLSLRLVFWRVLDALDYWLTLTRLRILDALCGAELQTPADE
Ga0306923_107573413	3300031910	Soil	MIAVWIVLWRVLDALDYWLTLTRLRILDALCGEGVEITFRE
Ga0306923_123291271	3300031910	Soil	MMADKSLRLVFWRVIDALDYWLTLAQLRILDALCGDGVEITTDD
Ga0306921_111414151	3300031912	Soil	MMADRSLRLVFWRVLDALDYWLTLTQLRILDALCGAGVGITADE
Ga0306921_120466561	3300031912	Soil	MMVDKSLGLVFWRVLDALDYWLTLTQLRILDTLCGERVEITTDD
Ga0310912_100304663	3300031941	Soil	MADKSLGLVFWRVLDALDCWLTLTRLRILDAICGAELETPADD
Ga0310912_108942512	3300031941	Soil	MIANRSLGLVFWRVLVDYWLTLTQLRILDALCGEGLEITT
Ga0310916_107745121	3300031942	Soil	MADKSLGLVFWRVLDALDYWLTLAQLRILDALCDEGIEM
Ga0310916_108958561	3300031942	Soil	MMADRSLRLVFWRVLDALDYWLTLTQLRILDALCGEGVG
Ga0310916_113220041	3300031942	Soil	MIANRSLGLVFWRVLVDYWLTLTQLRILDALCGEGLE
Ga0318530_101494703	3300031959	Soil	PSMMADKSLGLVFWRVLDSLDYWLTLTQLRILDALCGEGVEITTDE
Ga0318559_104761561	3300032039	Soil	FRGLVFWRVLDALDYWLTVTRLRILDALCGEGVEIKTDE
Ga0318549_105527212	3300032041	Soil	MMTYRSPELVFWRVLDALDYWLTLTRLRILDVLCGAG
Ga0318556_103207931	3300032043	Soil	MADKSLGLVFWRVLDSLDYWLTLTQLRILDALCGEGVEITTD
Ga0318558_103824861	3300032044	Soil	DKSLGLVFWRVLDALDYWLTLTQLRILDALCVEELKITADE
Ga0318532_101244703	3300032051	Soil	LLPRRVLTPSLRRLPSMMADKSLGLVFWRVLDSLDYWLTLTQLRILDALCGEGVEITTDE
Ga0318570_104926161	3300032054	Soil	SARSMTDDKSLGLVFWRVLDALDYWLTLTQLRILDALCVEELKITADE
Ga0318533_100390516	3300032059	Soil	MADRPLGLVFWRVLDALDYWLTLTQLRILDVLCGEGVEITADE
Ga0318533_104858441	3300032059	Soil	MIANRSLGLVFWRVLVDYWLTLTQLRILDALCGEGIEITTDE
Ga0318504_102935671	3300032063	Soil	MADKSLGLVCWRVRDALDYWLTLTQLRILDALCGEGVEITTD
Ga0306924_102972745	3300032076	Soil	LIDMADRSLSLRLVFWRVLDALDYWLTLTRLRILDALCGAELQTPADE
Ga0307471_1042064721	3300032180	Hardwood Forest Soil	MMANCPFGLVFWRVLDALDYWFTLTRLRILDALCGEGLEITADQ
Ga0306920_1026205132	3300032261	Soil	MMADKSLRLVFWWVIDALDYWLTLAQLRILDALCGDGVEITTDD
Ga0310914_117188811	3300033289	Soil	MIANRSLGLVFWRVLVDYWLTLTQLRILDALCGEGME

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F086519

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences