Metagenome Family F086521

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086521
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	105 residues
Representative Sequence	MLSKLSLVLACGVLASSFSMSAQASPFSSVRPQPTAPVITLVRDGCGLGFHWAACGCIRNYTACPVVVAPVAPVVVVPQYAPPVVATPAVCPYGYYLGPYGRCLPY
Number of Associated Samples	93
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	84.55 %
% of genes near scaffold ends (potentially truncated)	28.18 %
% of genes from short scaffolds (< 2000 bps)	90.91 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (72.727 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil (11.818 % of family members)
Environment Ontology (ENVO)	Unclassified (23.636 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 5.97% β-sheet: 4.48% Coil/Unstructured: 89.55%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.22
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.22
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF02586	SRAP	1.82
PF13489	Methyltransf_23	1.82
PF01925	TauE	0.91
PF12200	DUF3597	0.91
PF06897	DUF1269	0.91
PF04960	Glutaminase	0.91
PF01594	AI-2E_transport	0.91
PF01894	UPF0047	0.91
PF13426	PAS_9	0.91
PF00583	Acetyltransf_1	0.91
PF12146	Hydrolase_4	0.91
PF01355	HIPIP	0.91
PF05099	TerB	0.91
PF09361	Phasin_2	0.91
PF01578	Cytochrom_C_asm	0.91
PF01921	tRNA-synt_1f	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	1.82
COG0432	Thiamin phosphate synthase YjbQ, UPF0047 family	Coenzyme transport and metabolism [H]	0.91
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.91
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.91
COG1384	Lysyl-tRNA synthetase, class I	Translation, ribosomal structure and biogenesis [J]	0.91
COG2066	Glutaminase	Amino acid transport and metabolism [E]	0.91
COG3793	Tellurite resistance protein TerB	Inorganic ion transport and metabolism [P]	0.91
COG4803	Uncharacterized membrane protein	Function unknown [S]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
All Organisms	root	All Organisms	27.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
cellular organisms	root	All Organisms → cellular organisms	27.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	27.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	21.82 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.91 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	20.00 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.91 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.91 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	16.36 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.91 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.91 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.91 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.64 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	1.82 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.91 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.91 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.91 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.91 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.91 %
Thalassobaculaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae	0.91 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.91 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.64 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.82 %
Nisaea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae → Nisaea	0.91 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	0.91 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.91 %
Xanthobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter	0.91 %
unclassified Burkholderiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae	0.91 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.91 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.91 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	2.73 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.82 %
Burkholderiaceae bacterium PBA	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium PBA	0.91 %
Bradyrhizobium arachidis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium arachidis	0.91 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.91 %
Xanthobacter tagetidis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter → Xanthobacter tagetidis	0.91 %
Nisaea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae → Nisaea	0.91 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	0.91 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.91 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.91 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
Bradyrhizobium sp. YR681	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. YR681	2.73 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.82 %
unclassified Rhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium	0.91 %
Burkholderiaceae bacterium PBA	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium PBA	0.91 %
Bradyrhizobium arachidis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium arachidis	0.91 %
Xanthobacter tagetidis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter → Xanthobacter tagetidis	0.91 %
Nisaea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae → Nisaea	0.91 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	0.91 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.91 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.91 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
Bradyrhizobium sp. YR681	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. YR681	2.73 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.82 %
Rhizobium sp. JGI 0001005-K05	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. JGI 0001005-K05	0.91 %
Burkholderiaceae bacterium PBA	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium PBA	0.91 %
Bradyrhizobium arachidis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium arachidis	0.91 %
Xanthobacter tagetidis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter → Xanthobacter tagetidis	0.91 %
Nisaea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae → Nisaea	0.91 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	0.91 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.91 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.91 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0688611	Not Available	693	Open in IMG/M
3300004479\|Ga0062595_100781861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium arachidis	783	Open in IMG/M
3300004479\|Ga0062595_101651460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. YR681	600	Open in IMG/M
3300004480\|Ga0062592_101090407	Not Available	738	Open in IMG/M
3300005330\|Ga0070690_100902953	Not Available	691	Open in IMG/M
3300005332\|Ga0066388_100040014	All Organisms → cellular organisms → Bacteria	4614	Open in IMG/M
3300005332\|Ga0066388_100708740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1612	Open in IMG/M
3300005332\|Ga0066388_107315548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium PBA	554	Open in IMG/M
3300005332\|Ga0066388_107331646	Not Available	554	Open in IMG/M
3300005335\|Ga0070666_10285836	Not Available	1173	Open in IMG/M
3300005341\|Ga0070691_10490089	Not Available	709	Open in IMG/M
3300005438\|Ga0070701_11095694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	560	Open in IMG/M
3300005455\|Ga0070663_101654711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. YR681	572	Open in IMG/M
3300005539\|Ga0068853_101811667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. JGI 0001005-K05	592	Open in IMG/M
3300005543\|Ga0070672_101050597	Not Available	723	Open in IMG/M
3300005616\|Ga0068852_100738300	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300005713\|Ga0066905_100999223	Not Available	738	Open in IMG/M
3300005764\|Ga0066903_100263047	Not Available	2680	Open in IMG/M
3300005764\|Ga0066903_102872342	Not Available	934	Open in IMG/M
3300005764\|Ga0066903_103122184	Not Available	896	Open in IMG/M
3300005764\|Ga0066903_106922301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. YR681	588	Open in IMG/M
3300009094\|Ga0111539_10232754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2145	Open in IMG/M
3300009100\|Ga0075418_11025116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	893	Open in IMG/M
3300009146\|Ga0105091_10732427	Not Available	521	Open in IMG/M
3300009792\|Ga0126374_11059896	Not Available	640	Open in IMG/M
3300009870\|Ga0131092_10902184	All Organisms → cellular organisms → Bacteria → Proteobacteria	725	Open in IMG/M
3300010046\|Ga0126384_10906179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	797	Open in IMG/M
3300010398\|Ga0126383_10164920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2085	Open in IMG/M
3300012477\|Ga0157336_1013924	Not Available	656	Open in IMG/M
3300012506\|Ga0157324_1012621	Not Available	751	Open in IMG/M
3300012902\|Ga0157291_10234395	Not Available	601	Open in IMG/M
3300012948\|Ga0126375_11945042	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300012961\|Ga0164302_10242213	Not Available	1140	Open in IMG/M
3300012987\|Ga0164307_10243386	Not Available	1251	Open in IMG/M
3300012988\|Ga0164306_11393352	Not Available	596	Open in IMG/M
3300014260\|Ga0075307_1094546	Not Available	617	Open in IMG/M
3300014317\|Ga0075343_1057450	Not Available	801	Open in IMG/M
3300014320\|Ga0075342_1023705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1410	Open in IMG/M
3300014320\|Ga0075342_1121030	Not Available	695	Open in IMG/M
3300014745\|Ga0157377_10557983	Not Available	810	Open in IMG/M
3300014968\|Ga0157379_12519638	Not Available	514	Open in IMG/M
3300014969\|Ga0157376_12220357	Not Available	588	Open in IMG/M
3300016294\|Ga0182041_11341613	Not Available	655	Open in IMG/M
3300016387\|Ga0182040_11273995	Not Available	620	Open in IMG/M
3300016404\|Ga0182037_10544450	Not Available	979	Open in IMG/M
3300017792\|Ga0163161_10823613	Not Available	782	Open in IMG/M
3300017792\|Ga0163161_12115999	Not Available	500	Open in IMG/M
3300017959\|Ga0187779_10180080	Not Available	1315	Open in IMG/M
3300017959\|Ga0187779_10501672	Not Available	803	Open in IMG/M
3300017973\|Ga0187780_10202421	Not Available	1384	Open in IMG/M
3300017974\|Ga0187777_10086939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae → Nisaea	2041	Open in IMG/M
3300017974\|Ga0187777_11165163	Not Available	563	Open in IMG/M
3300017974\|Ga0187777_11208985	Not Available	553	Open in IMG/M
3300017999\|Ga0187767_10174940	Not Available	661	Open in IMG/M
3300018058\|Ga0187766_10171509	Not Available	1357	Open in IMG/M
3300018469\|Ga0190270_10836973	Not Available	931	Open in IMG/M
3300018481\|Ga0190271_11293204	Not Available	850	Open in IMG/M
3300019356\|Ga0173481_10664510	Not Available	558	Open in IMG/M
3300019361\|Ga0173482_10070634	Not Available	1194	Open in IMG/M
3300025904\|Ga0207647_10208425	Not Available	1129	Open in IMG/M
3300025907\|Ga0207645_10220297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1251	Open in IMG/M
3300025908\|Ga0207643_10356995	Not Available	918	Open in IMG/M
3300025926\|Ga0207659_10775496	Not Available	823	Open in IMG/M
3300025933\|Ga0207706_10454802	Not Available	1107	Open in IMG/M
3300025940\|Ga0207691_10094193	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2680	Open in IMG/M
3300025953\|Ga0210068_1003192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter → Xanthobacter tagetidis	2023	Open in IMG/M
3300025959\|Ga0210116_1031708	Not Available	996	Open in IMG/M
3300026041\|Ga0207639_10666053	Not Available	964	Open in IMG/M
3300026067\|Ga0207678_10670845	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300026075\|Ga0207708_10477082	Not Available	1042	Open in IMG/M
3300026121\|Ga0207683_11877704	Not Available	548	Open in IMG/M
3300027523\|Ga0208890_1069842	Not Available	572	Open in IMG/M
3300027561\|Ga0209887_1097612	Not Available	596	Open in IMG/M
3300027695\|Ga0209966_1016793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1388	Open in IMG/M
3300028587\|Ga0247828_10083632	Not Available	1472	Open in IMG/M
3300028589\|Ga0247818_10703297	Not Available	701	Open in IMG/M
3300028592\|Ga0247822_10624611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	865	Open in IMG/M
3300028597\|Ga0247820_11187710	Not Available	550	Open in IMG/M
3300028792\|Ga0307504_10389902	Not Available	545	Open in IMG/M
3300031255\|Ga0315554_1027554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	2472	Open in IMG/M
3300031280\|Ga0307428_1026482	Not Available	1851	Open in IMG/M
3300031358\|Ga0307438_1084685	Not Available	950	Open in IMG/M
3300031360\|Ga0307444_1075645	Not Available	1065	Open in IMG/M
3300031537\|Ga0307419_10352947	Not Available	517	Open in IMG/M
3300031562\|Ga0310886_10046501	Not Available	1938	Open in IMG/M
3300031585\|Ga0315534_1245958	Not Available	618	Open in IMG/M
3300031652\|Ga0315553_10039496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2753	Open in IMG/M
3300031652\|Ga0315553_10116051	Not Available	1318	Open in IMG/M
3300031698\|Ga0315537_1058973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2047	Open in IMG/M
3300031740\|Ga0307468_100252455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1242	Open in IMG/M
3300031740\|Ga0307468_101139075	Not Available	698	Open in IMG/M
3300031854\|Ga0310904_10400242	Not Available	899	Open in IMG/M
3300031858\|Ga0310892_10457760	Not Available	842	Open in IMG/M
3300031890\|Ga0306925_10469062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1344	Open in IMG/M
3300031890\|Ga0306925_11766573	Not Available	594	Open in IMG/M
3300031910\|Ga0306923_11756927	Not Available	639	Open in IMG/M
3300031910\|Ga0306923_12325358	Not Available	534	Open in IMG/M
3300031943\|Ga0310885_10062464	Not Available	1587	Open in IMG/M
3300031944\|Ga0310884_10108801	Not Available	1370	Open in IMG/M
3300031946\|Ga0310910_10658908	Not Available	829	Open in IMG/M
3300032013\|Ga0310906_10488913	Not Available	831	Open in IMG/M
3300032062\|Ga0315551_10379784	Not Available	515	Open in IMG/M
3300032122\|Ga0310895_10148132	Not Available	1011	Open in IMG/M
3300032174\|Ga0307470_10151500	All Organisms → cellular organisms → Bacteria	1419	Open in IMG/M
3300032174\|Ga0307470_11884748	Not Available	508	Open in IMG/M
3300032180\|Ga0307471_101893455	Not Available	746	Open in IMG/M
3300032783\|Ga0335079_11747682	Not Available	607	Open in IMG/M
3300033433\|Ga0326726_10703606	Not Available	975	Open in IMG/M
3300033550\|Ga0247829_10623699	Not Available	897	Open in IMG/M
3300033551\|Ga0247830_11241188	Not Available	595	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.27%
Host-Associated	Host-Associated	21.82%
Engineered	Engineered	0.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.45%
Plants	Host-Associated → Plants	21.82%
Aquatic	Environmental → Aquatic	11.82%
Wastewater	Engineered → Wastewater	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	64.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.82%
Marine	Environmental → Aquatic → Marine	10.91%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.00%
Freshwater	Environmental → Aquatic → Freshwater	0.91%
Peat	Environmental → Terrestrial → Peat	0.91%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.82%
Loam	Environmental → Terrestrial → Soil → Loam	11.82%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	9.09%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.09%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.55%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.82%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.91%
Sand	Environmental → Terrestrial → Soil → Sand	0.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.91%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.91%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.82%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	11.82%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.82%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	9.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.09%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.18%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.64%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.73%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.82%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.91%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.91%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	11.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.18%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.18%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	7.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.36%
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	5.45%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.55%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	3.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.64%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	3.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.73%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.82%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.91%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.91%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.91%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.91%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.91%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009870	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Linkou plant	Engineered	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012477	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.3.yng.040610	Host-Associated	Open in IMG/M
3300012506	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.old.040610	Host-Associated	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300014260	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D1_rd	Environmental	Open in IMG/M
3300014317	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D1	Environmental	Open in IMG/M
3300014320	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025953	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025959	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300031255	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1603-70	Environmental	Open in IMG/M
3300031280	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-240	Environmental	Open in IMG/M
3300031358	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-110	Environmental	Open in IMG/M
3300031360	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - SW1603-40	Environmental	Open in IMG/M
3300031537	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1602-30	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031585	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1602-40	Environmental	Open in IMG/M
3300031652	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-40	Environmental	Open in IMG/M
3300031698	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1602-70	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032062	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1602-90	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_06886111	2228664021	Soil	MLSKLSLVLIGGVLASSFSVSAQASPFSLVRPQPAAAVFTLVRDGCGLGFHWAPCGCIRNYTVCPVVVAPVAPVVVVPQYAPPVVATPAVCPYGYYLGPYGRCLPY
Ga0062595_1007818611	3300004479	Soil	MLSKLSLVLIGGVLASSFSVSAQASPFSLVRPQPAAAVITLVRDGCGLGFHWAPCGCIRNYTVCPVVVAPVAPVVVVPQYAPPVVATPAVCPYGYYLGPYGRCLPY*
Ga0062595_1016514601	3300004479	Soil	MLNKLPLVVTCGVLASSFSMSVQASPFSPVQVQPAPPAITLVRDGCGIGFHMAPCGCIRNYTACPIIVAPPVVVAPQYAPPVVATPAVCPYGYYLGPYGRCLPY*
Ga0062592_1010904071	3300004480	Soil	MLSKLSLVLIGGVLASSFSVSAQASPFSLVRPQPAAAVITLVRDGCGLGFHWAPCGCIRNYTVCPVVVAPVAPVVVAPQYAPPVVATPAVCPYGYYLGPYGRCLPY*
Ga0070690_1009029532	3300005330	Switchgrass Rhizosphere	MLAKWSLVLTCGVLASSFSLAAQAFPFSSVRAQQTEAVIELVRDGCGLGFHMAPCGCIRNYTACPVIVAPVAPVVVAPQYAPPVVVTPGVCPYGYYLGPYGRCLPY*
Ga0066388_1000400142	3300005332	Tropical Forest Soil	MLSKLSLVLTCGVLASSFSMCAQASPFLSVRPQPTASGITLVRDGCGLGFHWAPCGCIRNYTACPVVVAPVAPVVVAPQYAPPVVVTPAACPYGYYLGPYGRCLPY*
Ga0066388_1007087402	3300005332	Tropical Forest Soil	MRSKLSLVLTCGVLASSFSMAAQAAPFSITLQQQPAPVVTRVRDGCGIGFHMAVCGCIRNYTACPVVVAPVAPVVVAPHYAPPVVATPAVCPYGYYLGPDGRCLPY*
Ga0066388_1073155481	3300005332	Tropical Forest Soil	MLSKLSLVLTCGVLASSFSMSAQASPIPSVNPQPTTAFITLVRNGCGWGFHMAVCGCIRNYTACPVVVAPVVVAPAAPVVVAPHYAPPVHYAPPVVATPAVCPHGYYLGPDGTCLPY*
Ga0066388_1073316462	3300005332	Tropical Forest Soil	MLSKLSLVLTCGVLASSFSMSAQASQFSSVGPQPAAEVITLVRDGCGLGFHWAACGCIRNYTACPVVVVPAAPVVVTPQYAPPVVATPAVCPYGYYLGPYGRCLPY*
Ga0070666_102858362	3300005335	Switchgrass Rhizosphere	MLAKWSLVLTCGVLASSFSLAAQAFPFSSVRAQQTEAVIELVRDGCGLGFHMAPCGCIRNYTACPVIVAPVAPVVVAPQYAPPVVVTPGPCPYGYYLGPYGRCLPY*
Ga0070691_104900892	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	AAQAFPFSSVRAQQTEAVIKLVRDGCGLGFHMAPCGCIRNYTACPVIVAPVAPVVVAPQYAPPVVVTPGVCPYGYYLGPYGRCLPY*
Ga0070701_110956942	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	CGVLASSFSMSVQASPFSPVQVQPAPPAITLVRDGCGIGFHMAPCGCIRNYTACPIIVAPPVVVAPQYAPPVVATPAVCPYGYYLGPYGRCLPY*
Ga0070663_1016547111	3300005455	Corn Rhizosphere	MISRLSLVLTCGVLASSFFIGAQASPFLSVRPHQTAAVVALVRDGCGLGFHMAPCGCIRNYTACPVIVAPVAPVVVAPQYAPPVVVTPGVCPYGYYLGPYGRCLPY*
Ga0068853_1018116671	3300005539	Corn Rhizosphere	MLAKWSLVLTCGVLASSFSLAAQAFPFSSVRAQQTEAVIELVRDGCGLGFHMAPCGCIRNYTACPVIVAPVAPVVVAPQYAPLVTPGPCPYGYYLGPYGRCLPY*
Ga0070672_1010505972	3300005543	Miscanthus Rhizosphere	MLAKWSLVLTCGVLASSFSLAAQAFPFSSVRAQQTEAVIKLVRDGCGLGFHMAPCGCIRNYTACPVIVAPVAPVVVAPQYAPPVVVTPGPCPYGYYLGPYGRCLPY*
Ga0068852_1007383002	3300005616	Corn Rhizosphere	MLSKLSLVLTCGVLASSFSMSAQASPLSSVRPQSTAAFITLVRDGCGLGFHWAPCGCIRNYTACPVVVVPAPVVVAPQYAPPVVVTPAVCPYGYYLGPYGR
Ga0066905_1009992232	3300005713	Tropical Forest Soil	MLSKLSLILTCGVLASSFSMTAQASPFSSVRPQQTAAVITLVREGCGLGFHLAACGCIRNWTACPVVVAPVTPAVVAPQYAPPVVA
Ga0066903_1002630473	3300005764	Tropical Forest Soil	MPSKLSLVLACGVLVSSFSTIARASPIPQIRQESTASVTLVRDGCGLGFHYAACGCIRNYTACPVIVAPVAPVVVAPTAPAAVVPHYAPPVVTTPAVCPYGYYLGPYGRCLPY*
Ga0066903_1028723422	3300005764	Tropical Forest Soil	MLSKLSLVLTCGVLASSFSMSAQASPIPSVNPQPTTAFITLVRNGCGWGFHMAVCGCIRNYTACRVVVAPVVVAPAAPVVVAPHYAPPVHYAPPVVATPAVCPHGYYLGPDGTCLPY*
Ga0066903_1031221843	3300005764	Tropical Forest Soil	MLSKLSLSLVLTCGVLAFSSMSAQASPIPSVRPQPAAVITLVRNGCGWGSHMAACGCIRNYTACPVVVAPVAPVVVAPHYAPVVVAPHHVVAPVVVA
Ga0066903_1069223011	3300005764	Tropical Forest Soil	MRSKLSLVLTCGVLASSFSMAAQAAPFSITLEQQPAPVVTRVRDGCGIGFHMAVCGCIRNYTACPVVVAPIAPVVVAPQYAPPVVATPAVCPYGYYLGPDGRCLPY*
Ga0111539_102327544	3300009094	Populus Rhizosphere	MLAKWLLVLTCGVLASSFSSGAQAFPFSSVRAQQTQAVIELVRDGCGLGFHMAPCGCIRNYTACPVIVAPVAPVVVAPQYAPPVVVTPGVCPYGYYLGPYGRCLPY*
Ga0075418_110251161	3300009100	Populus Rhizosphere	MLAKWSLVLTCVVLASSFSIGAQAFPFSSVRAQQTEAVIELVRDGCGLGFHMAPCGCIRNYTACPVIVAPVAPVVVAPQYAPPVVVTPRVCPYGTYLGPYGRCLPYQTP
Ga0105091_107324271	3300009146	Freshwater Sediment	MLAKWSLVLTCGVLASSFSTGAQAFPFSFVRAQQTEAVIELVRDGCGLGFHMAPCGCIRNYTACPVIVAPVAPVVVAPQYAPPVVVTPGACPYGYYLGPYGRCLPY*
Ga0126374_110598961	3300009792	Tropical Forest Soil	MRSKLSLVLTCGVLASSFSMAAQAAPFSITLEQQPAPVVTRVRDGCGIGFHMAVCGCIRNYTACPVVVAPIAPVVVAPRYAPPVVATPAVCPYGYYLGPDGRCLPY*
Ga0131092_109021842	3300009870	Activated Sludge	SLSMSVQASPLSPVPASSAASAITLVRDGCGIGFHMAPCGCIRNYTACPVIVAPPVVVAPQYAPPVVATPAVCPYGYYLGPYGRCLPY*
Ga0126384_109061792	3300010046	Tropical Forest Soil	MRSKLSLVLTCGVLASSFSMAAQAAPFSITLEQQPAPVVTRVRDGCGIGFHMAVCGCIRNYTACPVVVAPIAPVVVAPRYAPPVVATP
Ga0126383_101649203	3300010398	Tropical Forest Soil	MRSKLSLVLTCGVLASSFSMAAQAAPFSITLQQQPAPVVTRVRDGCGIGFHMAVCGCIRNYTACPVVVAPVEPVVVAPHYAPPVVATPAVCPYGYYLGPDGRCLPY*
Ga0157336_10139241	3300012477	Arabidopsis Rhizosphere	MLSKLSLVLTCGVLASSFSMSAHASSISPARPQPAPSSITLVRDGCGLGFHWAPCGCIRNYTACPVVVAPVAPVVVAPQYAPPVVVTPAVCPYGYY
Ga0157324_10126211	3300012506	Arabidopsis Rhizosphere	MLSKLSLVLTCGVLASSFSMSAHASSISPARPQPAPSSITLVRDGCGLGFHWAPCGCIRNYTACPVVVAPVAPVVVAPQYAPPVVVTPAV
Ga0157291_102343951	3300012902	Soil	SLVLTCGVLASSFFIGAQASPFLSVRPHQTAAVVALVRDGCGLGFHMAPCGCIRNYTACPVIVAPVAPVVVAPQYAPPVVVTPGVCPYGYYLGPYGRCLPY*
Ga0126375_119450421	3300012948	Tropical Forest Soil	MLSKLPLVLVCGVLGSSFSMDAQAFLFSSVRPQPTAPVITLVRDGCGLGFHWAPCGCIRNYTACPVVVAPVAPVVVAPQYAPPVVVTPAVCPYGYYLGPYGR
Ga0164302_102422132	3300012961	Soil	MLSKLSLVLTCGVLASSFSMSAQASPFLSFRPQPTAVIKLVRDGCGLGFHWAACGCIRNYTVCPVIVAPVAPVVVAPHYAPPVVATPAACPYGYYLGPAVMVATLFVICLLTFPTLKGAFVAPS*
Ga0164307_102433862	3300012987	Soil	MLSKLSLVLTCGVLASSFSMSAQASPFLSVRPQPTAVIKLVRDGCGLGFHWAACGGIRNYPACPVVVVPAPVVVAPQYAPPVVVTPAVCPYGYYL
Ga0164306_113933521	3300012988	Soil	MLSKLSLVLTCGVLASSFSISAQASPFLSVRPHPTAAVITLVRDGCGLGFHWAACGCIRNYTVCPVIVAPVAPVVVAPHYAPPVVATPAACPYGYYLGPYGRCLPY*
Ga0075307_10945461	3300014260	Natural And Restored Wetlands	MLSKLSLVLTCGVLASSMSAQAAPIYSVRLQPATTSITLVRDGCGLGFHWAPCGCIRNYSACPIVVTPAAPVVVAPEYAPPVVTRPIVCPYGYYLDQYGRCLLY*
Ga0075343_10574501	3300014317	Natural And Restored Wetlands	MLSKLSLVLTCGVLASSMSAQAAPIYSVRLQPATTSITLVRDGCGLGFHWAPCGCIRNYSACPIVVAPAAPVVVAPEYAPPVVTRPIVCPYGYYLDQYGRCLLY*
Ga0075342_10237053	3300014320	Natural And Restored Wetlands	MLSKLSLALTCGVLASSFSMSAQAAPISSVRLQPASTSTTLVRNGCGLGFHWAPCGCIRNYTACPVIVAPAAPVVVEPQYAPPVVTRPAVCPYGYYLDRYGRCLPY*
Ga0075342_11210301	3300014320	Natural And Restored Wetlands	SMGAEASPISPVRAQQVTAPVTLVRNGCGIGFHMAPCGCIRNYTACPVIVAPVAPVVVAPQYAPPVVATPAVCPYGYYLGPYGRCLPY*
Ga0157377_105579831	3300014745	Miscanthus Rhizosphere	MLAKWSLVLTCGVLASSFSLAAQAFPFSSVRAQQTEAVIKLVRDGCGLGFHMAPCGCIRNYTACPVIVAPVAPVVVAPQYAPPVVVTPGVCPYGYYLGPYGRCLPY*
Ga0157379_125196381	3300014968	Switchgrass Rhizosphere	RLSLVLTCGVLAFSFFIGAQASPFLSVRPHQTAAVVALVRDGCGLGFHMAPCGCIRNYTACPVIVAPVAPVVVAPQYAPPVVVTPGVCPYGYYLGPYGRCLPY*
Ga0157376_122203572	3300014969	Miscanthus Rhizosphere	MLAKWSLVLTCGVLASSFCMGTQASPISSVRPQQTEAVIELVRDGCGLGFHMAPCGCIRNYTACPVIVAPVAPVVVAPQYAPPVVVTPGVCPYGYYLGPYGRCLPY*
Ga0182041_113416131	3300016294	Soil	MLSKLSLVLTCGVLASSFSMSAQASPISSVNLKPTTAFITLVRNGCGWGFHRAVCGCIRHYTACPVVVAPVVVAPVAPVVVAPHYAPHVVVPHYAPPVVATPAVCPHGYYLGPDGTCLPY
Ga0182040_112739951	3300016387	Soil	MLSKLSLVLTCGVLASSFSMSAQASPISSVNLKPTTAFITLVRNGCGWGFHMAVCGCIRNYTACPVVVAPVVVAPVAPVVVAPHYAPHVVVPHYAPPVVATPAVCPHGYYLGPDGTCLPY
Ga0182037_105444501	3300016404	Soil	MLSKLSLVLTCSVLASSFSMSAQASPISSVNPQPTTAFITLVRNGCGWGFHMAVCGCIRNYTACPVVVAPVVVAPAAPVVVAPHYAPHVVVPHYAPPVVATPAVCPHGYYLGPDGTCLPY
Ga0163161_108236132	3300017792	Switchgrass Rhizosphere	MLAKWSLVLTCGVLASSFSLAAQAFPFSSVRAQQTEAVIELVRDGCGLGFYMAPCGCIRNYTACPVIVAPVAPVVVAPQYAPPVVVTPGPCPYGYYLGPYGRCLPY
Ga0163161_121159991	3300017792	Switchgrass Rhizosphere	MLSKLSLVLACGVLASSFSMSAQASPFSSVRPQPTAPVITLVRDGCGLGFHWAACGCIRNYTACPVVVVPVAPVVVAPLYAPSVVVTLAVCPYGYYLGPYGRCLPY
Ga0187779_101800803	3300017959	Tropical Peatland	MLSKLSLVLTCSVLASLFSMSAQASPISSVNPQPTTAFSTLVRDGCGWGFHMAVCGCIRNYTACPVVVAPVVVAPAGPVVVAPHYAPHVVVPHYAPPVVATPAVCPHGYYLGPDGTCLPY
Ga0187779_105016722	3300017959	Tropical Peatland	MLSKLSLVLTCGVLLSSFSINAQASPILSLQAQPAPTLVTRVRDGCGWGFHLAPCGCIRNYTACPVIVVPSAPVVVAPHYAPPVIARPAVCPYGYYLSPNGTCLPY
Ga0187780_102024211	3300017973	Tropical Peatland	MLSKLSLVLTCSVLASLFSMSAQASPISSVNPQPAAAVITLVRDGCGWGFHMAVCGCIRNYTACPVVVAPVVVAPVGPVVVAPHYAPHVVVPHYAPPVVATPAVCPHGYYLGPDGTCLPY
Ga0187777_100869393	3300017974	Tropical Peatland	MLSKLSLVLTCGVLLSSFSMNAQASPILSLQAQPAPALVTRVRDGCGWGFHLAPCGCIRNYTACPVIVVPSAPVVVAPHYAPPVIARPAVCPYGYYLSPNGTCLPY
Ga0187777_111651631	3300017974	Tropical Peatland	MLSKLSLVLTCGVLASLFSMSAQASPISSVNPQPAAAVITLVRDGCGWGFHMAVCGCIRNYTACPVVVAPVVVAPAGPVVVAPHYAPHVVVPHYAPPVVATPA
Ga0187777_112089851	3300017974	Tropical Peatland	MLSKLSSLLICGVLTLSFSMTAQASPILSLQTQPTPALVTRVRDGCGWGFHLAPCGCIRNYTACPVIVVPSSPVVVVPHYVPPVVARPAVCPYGYYLSANGTCLPY
Ga0187767_101749401	3300017999	Tropical Peatland	MLSKLSLVLTCSVLASLFSMSAQASPISSVNPQPTTAFITLVRDGCGWGFHMAVCGCIRNYTACPVVVAPVVVAPAGPVVVAPHYAPHVVVPHYAPPVVATPAVCPHGYYLGPDGTCLPY
Ga0187766_101715091	3300018058	Tropical Peatland	MLSKLSLVLTCSVLASLFSMSAQASPISSVNPQPAAAVITLVRDGCGWGFHMAVCGCIRNYTACPVVVAPVVVAPAGPVVVAPHYAPHVVVPHYAPPVVATPAVCPHGYYLGPDGTCLPY
Ga0190270_108369732	3300018469	Soil	LASSFSIGAQAFPFSSVRAQETEAVIELVRDGCGLGFHMAQCGCIRNYTACPVIVAPVAPVVVAPQYAPPVVVTPGVCPYGYYLGPYGRCLPY
Ga0190271_112932042	3300018481	Soil	MLAKWSLVLTCGVLASSFCMGTQASPISSVRPQQTEAVIELVRDGCGLGFHMAPCGCIRNYTACPVIVAPVAPVVVAPQYAPPVVVTPGVCPYGYYLGPYGRCLPY
Ga0173481_106645101	3300019356	Soil	MLSKLSLVLIGGVLASSFSVSAQASPFSLVRPQPAAAVITLVRDGCGLGFHGAPCGCIRNYTVCPVVVAPVAPVVVVPQYAPPVVATPAVCPYGYYLGPYGRCLPY
Ga0173482_100706342	3300019361	Soil	MLSKLSLVLIGGVLASSFSVSTQASPFSLVRPQPAAAVITLVRDGCGLGFHWAPCGCIRNYTVCPVVVAPVAPVAVVPQYAPPVVATPAVCPYGYYLGPYGRCLPY
Ga0207647_102084251	3300025904	Corn Rhizosphere	MLAKWSLVLTCGVLASSFSLAAQAFPFSSVRAQQTEAVIKLVRDGCGLGFHMAPCGCIRNYTACPVIVAPVAPVVVAPQYAPPVVVTPGVCPYGYYLGPYGRCLPY
Ga0207645_102202972	3300025907	Miscanthus Rhizosphere	MLAKWSLVLTCGVLASSFSLAAQAFPFSSVRAQQTEAVIKLVRDGCGLGFHMAPCGCIRNYTACPVIVAPVAPVVVAPQYAPLVTPGPCPYGYYLGPYGRCLPY
Ga0207643_103569951	3300025908	Miscanthus Rhizosphere	MLAKWSLVLTCGVLASSFSLAAQAFPFSSVRAQQTEAVIELVRDGCGLGFHMAPCGCIRNYTACPVIVAPVAPVVVAPQYAPPVVVTPGPCPYGYYLGPYGRCLPY
Ga0207659_107754962	3300025926	Miscanthus Rhizosphere	LLSMLAKWSLVLTCGVLASSFSLAAQAFPFSSVRAQQTEAVIELVRDGCGLGFHMAPCGCIRNYTACPVIVAPVAPVVVAPQYAPPVVVTPGPCPYGYYLGPYGRCLPY
Ga0207706_104548022	3300025933	Corn Rhizosphere	MISRLSLVLTCGVLASSFFIGAQASPFLSVRPHQTAAVVALVRDGCGLGFHMAPCGCIRNYTACPVIVAPVAPVVVAPQYAPPVVVTPGPCPYGYYLGPYGRCLPY
Ga0207691_100941933	3300025940	Miscanthus Rhizosphere	VLSKLSLVLTCGVLASSFSLAAQAFPFSSVRAQQTEAVIKLVRDGCGLGFHMAPCGCIRNYTACPVIVAPVAPVVVAPQYAPPVVVTPGPCPYGYYLGPYGRCLPY
Ga0210068_10031923	3300025953	Natural And Restored Wetlands	MLSKLSLVLTCGVLASSMSAQAAPIYSVRLQPATTSITLVRDGCGLGFHWAPCGCIRNYSACPIVVAPAAPVVVAPEYAPPVVTRPIVCPYGYYLDQYGRCLLY
Ga0210116_10317081	3300025959	Natural And Restored Wetlands	MLSKLSLVLTCGVLASSMSAQAAPIYSVRLQPATTSITLVRDGCGLGFHWAPCGCIRNYSACPIVVAPAAPVVVAPEYAPPVVTRPIVCPYGYYLDHY
Ga0207639_106660532	3300026041	Corn Rhizosphere	MISRLSLVLTCGVLASSFFIGAQASPFLSVRPHQTAAVVALVRDGCGLGFHMAPCGCIRNYTACPVIVAPVAPVVVAPQYAPPVVVTPGVCPYGYYLGPYGRCLPY
Ga0207678_106708451	3300026067	Corn Rhizosphere	MLAKWSLVLTCGVLASSFSLAAQAFPFSSVRAQQTEAVIELVRDGCGLGFHMAPCGCIRNYTACPVIVAPVAPVVVAPQYAPLVTPGPCPYGYYLGPYG
Ga0207708_104770822	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MLAKWSLVLTCGVLASSFSLAAQAFPFSSVRAQQTEAVIELVRDGCGLGFHMAPCGCIRNYTACPVIVAPVAPVVVAPQYAPLVTPGPCPYGYYLGPYGRCLPY
Ga0207683_118777041	3300026121	Miscanthus Rhizosphere	MLSKLSLVLTCGVLASSFSMSAQASPLSSVRPQSTAAFITLVRDGCGLGFHWAPCGCIRNYTACPVVVVPAPVVVAPQYAPPVVVTPAVCPYGYYLGPYG
Ga0208890_10698421	3300027523	Soil	MLSKLSLVLACGVLASSFSMSAQASPFSSVRPQPTAPVITLVRDGCGLGFHWAACGCIRNYTACPVVVAPVAPVVVVPQYAPPVVATPAVCPYGYYLGPYGRCLPY
Ga0209887_10976122	3300027561	Groundwater Sand	MLSKLSLVLACGVLASSFSISAQASPLSSVRPQPTASVITLVRDGCGLGFHWAPCGCIRNYTACPVVVAPVAPVVVVPQYAPPVVPAVCPYGYYLGPYGRCLPY
Ga0209966_10167932	3300027695	Arabidopsis Thaliana Rhizosphere	MLSKLSLVLIGGVLASSFSVSAQASPFSLVRPQPAAAVITLVRDGCGLGFHWAPCGCIRNYTVCPVVVAPVAPVVVVPQYAPPVVATPAVCPYGYYLGPYGRCLPY
Ga0247828_100836321	3300028587	Soil	MLSKLSFVLACGVLASSFSMNAQASLLSSVRPQPTAPVITLVREGCGLGFHMAVCGCIRNWTACPVVVVPVAPVVVAPQYAPPVVATPAVCPYGYYLGSYGRCLPY
Ga0247818_107032971	3300028589	Soil	MLTKLSLVLACGVLASSFSMSAQASPISSARPQPAAPVITWVRDGCGLGFHWAACGCIRNYTACPVVVPVAPVVVAPQYAPPVVVTPAVCPYGYYLGPYG
Ga0247822_106246112	3300028592	Soil	MLTKLSLVLACGVLASSFSMSAQASPFSSVRPQPSAPVITLVRDGCGLGFHWAACGCIRNYTACPVVVVPVAPVVVAPQYAPPVVVTPAVCPYGYYLGPYGRTSHMTRSAFRPSSYSPAAALSRRQQA
Ga0247820_111877102	3300028597	Soil	MLSKLSFVLACGVLASSFSMNAQASLLSSVRPQPTAPVITLVREGCGLGFHMAVCGCIRNWTACPVVVVPVAPVVVAPQYAPPVVATPAVCPYGYYLGPYG
Ga0307504_103899021	3300028792	Soil	MLSKLSLVLACGLLASSFSMNAQASPFSSVRPLPAAPVITLVRDGCGLGFHWAPCGCIRNYTACPVIVVPVAPVVVAPQYAPPVVVTPAVCPYGYYLGPYGRCLPY
Ga0315554_10275542	3300031255	Salt Marsh Sediment	MLGKLSLVLICGVLASSFLMSAQAAPISSVQLQPATTSVTLVRNGCGLGFHWAPCGCIRNYTACPVIVAPAAPVVVEPQYAPPVVRRPVVCPYGYYLDQYGRCLPY
Ga0307428_10264823	3300031280	Salt Marsh	MLSKLSLVLACAVLASSFSISAQASPISSVRPQPATAPITLVRNGCGLGFHWAPCGCIRNYTVCPVIVAPVAPVVVAPQYAPPVVARPAVCPYGYYLGPYGRCLPY
Ga0307438_10846852	3300031358	Salt Marsh	MLSKLSLVLACGVLASSFSIAAQASPMSSVRPQPATAPITLVRNGCGLGFHWAPCGCIRNYTVCPVIVAPVAPVVVAPQYAPPVVARPGACPYGYYLGPYGRCLPY
Ga0307444_10756452	3300031360	Salt Marsh	LSKLSLVLACGVLASSFSIAAQASPMSSVRPQPATAPITLVRNGCGLGFHWAPCGCIRNYTVCPVIVAPVAPVVVAPQYAPPVVARPGACPYGYYLGPYGRCLPY
Ga0307419_103529472	3300031537	Salt Marsh	MLSKLSLVLTCGVLASSFPMSAQAAPISSVRLQPAPTSITLVRNGCGLGFHWAPCGCIRNYTACPVIVAPAAPVVVEPQYAPPVVTRRAVCPYGYYLDQYGR
Ga0310886_100465015	3300031562	Soil	GAQASPFLSVRPHQTAAVVALVRDGCGLGFHMAPCGCIRNYTACPVIVAPVAPVVVAPQYAPPVVVTPGVCPYGYYLGPYGRCLPY
Ga0315534_12459581	3300031585	Salt Marsh Sediment	MLGKLLVLTCGLLTSSFSVSAQAASISSIGLEPATTSITFVRNGCGLGFHWAPCGCIRNYTVCPVIVAPAAPVVVEPQYPPPVVTRPVVCPYGYYLDQYGRCLPY
Ga0315553_100394966	3300031652	Salt Marsh Sediment	MLSKLSLVLACGVLASSFSIGAQASPMSSVRPQPATAPVTLVRNGCGLGFHWAPCGCIRNYTVCPVIVAPVAPVVVAPQYAPPVVARPAVCPYGYYLGPYGRCLPY
Ga0315553_101160512	3300031652	Salt Marsh Sediment	MLSKLSLVLACAVLASSFSISAQASPMSSVRPQPATAPITLVRNGCGLGFHWAPCGCIRNYTVCPVIVAPVAPVVVAPQYAPPVVARPAVCPYGYYLGPYGRCLPY
Ga0315537_10589732	3300031698	Salt Marsh Sediment	MLNKLSLSVACSVLAFSMSAQAAPTSSVRPQSATTSITLVRNGCGLGFHWAPCGCIRNYTACPVVVAPPAPVVVAPQYAPPVITRPAVCPYGYYLDQYGRCLPY
Ga0307468_1002524552	3300031740	Hardwood Forest Soil	MLTKLSLVLACGVLASSFSMSAQASPFSSARPQPAAPVITLVRDGCGLGFHWAACGCIRNYTACPVVVVPVAPVVVAPQYAPPVVVTPAVCPYGYYLGPYGRCLPY
Ga0307468_1011390751	3300031740	Hardwood Forest Soil	MLSKLSLVLGCGVLASSFSMNAQASPFSSVRPQPTGPVIALVRDGCGLGFHWAPCGCIRNYTACPVVVAPVAPVVVVPQYPPPVVPAVCPYGYYLGPYGRCLPY
Ga0310904_104002421	3300031854	Soil	LASSFSLAAQAFPFSSVRAQQTEAVIELVRDGCGLGFHMAPCGCIRNYTACPVIVAPVAPVVVAPQYAPLVTPGPCPYGYYLGPYGRCLPY
Ga0310892_104577601	3300031858	Soil	MLAKWSLVLTCGVLASSFSIGAQAFPFSSVRAQQTEAVIELVRDGCGLGFHMAPCGCIRNYTACPVIVAPVAPVVVAPQYAPPVVVTPGPCPYGYYLGPYGRCLPY
Ga0306925_104690622	3300031890	Soil	MLSKLSLVLTCSVLASSFSMSAQASPISSVNLKPTTAFITLVRNGCGWGFHMAVCGCIRNYTACPVVVAPVVVAPVAPVVVAPHYAPHVVVPHYAPPVAATPAVCPHGYYLGPDGTCLPY
Ga0306925_117665731	3300031890	Soil	MLSKLSFVLTCGVLASSFSMSTQASPISSVRPQPATAFITLVRNGCGLGFHWAACGCIRNYTVCPVVVAPVAPVVVAPQYAPPIVARPVVCPYGYISVRTVDACRTELARAHATKASASAGAFSM
Ga0306923_117569271	3300031910	Soil	MLSKLSLVLTCSVLASSFSMSAQASPISSVNLKPTTAFITLVRNGCGWGFHMAVCGCIRNYTACPVVVAPVVVAPVAPVVVAPHYAPHVVVPHYAPPVVATPAVCPHGYYLGPDGTCLPY
Ga0306923_123253581	3300031910	Soil	MLSKLSLVLTCSVLASSFSMSAQASPISSVNPQPTTAFITLVRNGCGWGFHMAACGCIRNYTACPVVVAPVVVAPAAPVVVAPHYAPHVVVPHYAPPVIATPAVCPHGYYLGPDGTCLPY
Ga0310885_100624643	3300031943	Soil	MLAKWSLVLTCGVLASSFSLAAQAFPFSSVRAQQTEAVIKLVRDGCGLGFHMAPCGCIRNYTACPVIVAPVAPVVVAPQYAPPVVVTPGPCPYGYYLGPYGRCLPY
Ga0310884_101088013	3300031944	Soil	MLAKWSLVLTCGVLASSFSLAAQAFPFSSVRAQQTEAVIELVRDGCGLGFHMAPCGCIRNYTACPVIVAPVAPVVVAPQYAPLVTP
Ga0310910_106589081	3300031946	Soil	MLSKLSLVLTCSVLASSFSMSAQASPISSVNPQPTTAFITLVRNGCGWGFHMAVCGCIRNYTACPVVVAPVVVAPVAPVVVAPHYAPHVVVPHYAPPVVATPAVCPHGYYLGPDGTCLPY
Ga0310906_104889133	3300032013	Soil	MLAKWSLVLTCGVLASSFSLAAQAFPFSSVRAQQTEAVIKLVRDGCGLGFHMAPCGCIRNYTACPVIVAPVAPVVVAPQYAPPVVV
Ga0315551_103797841	3300032062	Salt Marsh Sediment	MLSKLSLVLTCGVLASAFSMSAQAAPISSVRLQPTTTSITLVRNGCGLGFHWAPCGCIRNYTACPVVVAPPAPVVVAPQYAPPVITRPAVCPYGYYLDQYGRCLPY
Ga0310895_101481322	3300032122	Soil	MLAKWSLVLTCGVLASSFSLAAQAFPFSSVRAQQTEAVIELVRDGCGLGFHMAPCGCIRNYTACPVIVAPVAPVVVAPQYAPPVVVTPGPCPYGYSLGPYGRCLPY
Ga0307470_101515001	3300032174	Hardwood Forest Soil	MLSKLSLVLGCGVLASSFSMNAQASPFSSVRPQPTAPVIRLVRDGCGLGFHWAACGCIRNYTACPVVVVPVAPVVVAPLYAPSVVVTLAVCPYGYYLGPYGRCLPY
Ga0307470_118847481	3300032174	Hardwood Forest Soil	MLSKLSLVLACGVLASSFSMSAQASPFSSVRPQPTAPVITLVRDGCGLGFHWAACGCIRNYTACPVVVAPVAPVVVVPQYPPPVVPAVCPYGYYLGPYGRCLPY
Ga0307471_1018934551	3300032180	Hardwood Forest Soil	MLSKLSLVLACGVLASSFSMSAQASPFSSVRPQPTVPVITLVRDGCGLGFHWAACGCIRNYTACPVVVAPVAPVVVVPQYAPPVVATPAVCPYGYYLGPYGRCLPY
Ga0335079_117476821	3300032783	Soil	FPFPTAQGMFQEAYLRGVLSMLSKLSLVLTCGVLALSFSMNAQASPLLSVQRQPAPALVTPVRDGCGLGFHWAACGCIRNYTVCPVIIAPAAPVVVAPAAPVVVAPRYAPPAVTVPAVCPYGYYLGPYGRCLPY
Ga0326726_107036061	3300033433	Peat Soil	MLSKLSFVLACGVLASSFSMNTQASQFSSVRPQPTAPVITLVRDGCGLGFHWAPCGCIRNYTACPVIVAPVAPVVVAPQYAPPVVVTPAVCPYGYYLGPYGRCLPY
Ga0247829_106236993	3300033550	Soil	MLTKLSLVLACGVLASSFSMSAQASPISSARPQRAAPVITWVRDGCGLGFHWAACGCIRNYTACPVVVPVAPVVVAPQYAPPVVVTPAVCPYGYYLGPYGRCLPY
Ga0247830_112411882	3300033551	Soil	MLSKLSLVLACGVLASSFSMSVQASPFSSVRPQPTAPVITLVRDGCGLGFHWAACGCIRNYTACPVIVAPVAPVVVVPQYAPPVVATPAVCPYGYYLGPYGRCLPY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F086521

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences