Metagenome / Metatranscriptome Family F086525

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F086525
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	63 residues
Representative Sequence	MVVLAHHRAADDFEAIRARMEELRRERAEAVRGEPIGSPQPSSPSPSRPGAAADPGFVDASMD
Number of Associated Samples	72
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	5.45 %
% of genes near scaffold ends (potentially truncated)	40.91 %
% of genes from short scaffolds (< 2000 bps)	95.45 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (69.091 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (39.091 % of family members)
Environment Ontology (ENVO)	Unclassified (75.455 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.818 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.75% β-sheet: 0.00% Coil/Unstructured: 68.25%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF07978	NIPSNAP	27.27
PF13340	DUF4096	3.64
PF02148	zf-UBP	2.73
PF00444	Ribosomal_L36	2.73
PF07690	MFS_1	1.82
PF04909	Amidohydro_2	1.82
PF08241	Methyltransf_11	0.91
PF00487	FA_desaturase	0.91
PF00580	UvrD-helicase	0.91
PF00239	Resolvase	0.91
PF07508	Recombinase	0.91
PF13428	TPR_14	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0257	Ribosomal protein L36	Translation, ribosomal structure and biogenesis [J]	2.73
COG5207	Uncharacterized Zn-finger protein, UBP-type	General function prediction only [R]	2.73
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.82
COG0210	Superfamily I DNA or RNA helicase	Replication, recombination and repair [L]	0.91
COG1074	3Ã¢â‚¬â„¢-5Ã¢â‚¬â„¢ helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	Replication, recombination and repair [L]	0.91
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.91
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.91
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.91
COG3973	DNA helicase IV	Replication, recombination and repair [L]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.09 %
All Organisms	root	All Organisms	30.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.09 %
cellular organisms	root	All Organisms → cellular organisms	30.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.09 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	30.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.09 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	21.82 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.09 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	20.00 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.82 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.09 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	6.36 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.36 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.82 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.91 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.09 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.36 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.82 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.91 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.91 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.91 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.09 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.36 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.82 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.91 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.91 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	0.91 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.09 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.36 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.82 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.91 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.91 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.91 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.09 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.36 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.82 %
Mesorhizobium sp. LSJC280B00	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LSJC280B00	0.91 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.91 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.91 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.91 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_100914760	All Organisms → cellular organisms → Bacteria → Proteobacteria	1453	Open in IMG/M
3300005363\|Ga0008090_10077919	Not Available	892	Open in IMG/M
3300005468\|Ga0070707_102178079	Not Available	522	Open in IMG/M
3300009090\|Ga0099827_10736200	Not Available	853	Open in IMG/M
3300009143\|Ga0099792_10046259	Not Available	2100	Open in IMG/M
3300010048\|Ga0126373_12714513	Not Available	553	Open in IMG/M
3300010359\|Ga0126376_11034882	Not Available	824	Open in IMG/M
3300010360\|Ga0126372_10331119	Not Available	1355	Open in IMG/M
3300010360\|Ga0126372_10909966	Not Available	883	Open in IMG/M
3300010361\|Ga0126378_10470528	Not Available	1371	Open in IMG/M
3300010366\|Ga0126379_13223864	Not Available	546	Open in IMG/M
3300010376\|Ga0126381_100830014	Not Available	1328	Open in IMG/M
3300010376\|Ga0126381_103547289	Not Available	612	Open in IMG/M
3300010398\|Ga0126383_13285190	Not Available	528	Open in IMG/M
3300012202\|Ga0137363_10207750	Not Available	1574	Open in IMG/M
3300012202\|Ga0137363_11638565	Not Available	536	Open in IMG/M
3300012917\|Ga0137395_10475651	Not Available	899	Open in IMG/M
3300012923\|Ga0137359_10243694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1604	Open in IMG/M
3300012971\|Ga0126369_10749332	Not Available	1056	Open in IMG/M
3300012971\|Ga0126369_12123056	Not Available	649	Open in IMG/M
3300016270\|Ga0182036_10331268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1167	Open in IMG/M
3300016270\|Ga0182036_10366142	Not Available	1115	Open in IMG/M
3300016270\|Ga0182036_10763313	Not Available	786	Open in IMG/M
3300016319\|Ga0182033_10575176	Not Available	976	Open in IMG/M
3300016319\|Ga0182033_10660818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LSJC280B00	912	Open in IMG/M
3300016319\|Ga0182033_11889118	Not Available	543	Open in IMG/M
3300016341\|Ga0182035_10146616	Not Available	1806	Open in IMG/M
3300016341\|Ga0182035_10200738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1577	Open in IMG/M
3300016341\|Ga0182035_10557668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	985	Open in IMG/M
3300016357\|Ga0182032_11003854	Not Available	713	Open in IMG/M
3300016357\|Ga0182032_11466181	Not Available	592	Open in IMG/M
3300016371\|Ga0182034_10859252	Not Available	779	Open in IMG/M
3300016387\|Ga0182040_11474107	Not Available	577	Open in IMG/M
3300016404\|Ga0182037_11633628	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300016422\|Ga0182039_11023007	Not Available	742	Open in IMG/M
3300016422\|Ga0182039_12163810	Not Available	513	Open in IMG/M
3300016445\|Ga0182038_10895550	Not Available	782	Open in IMG/M
3300016445\|Ga0182038_11635099	Not Available	580	Open in IMG/M
3300017970\|Ga0187783_10146593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1739	Open in IMG/M
3300021432\|Ga0210384_11813483	Not Available	516	Open in IMG/M
3300021476\|Ga0187846_10086900	Not Available	1353	Open in IMG/M
3300021560\|Ga0126371_13527803	Not Available	528	Open in IMG/M
3300027903\|Ga0209488_10586071	Not Available	810	Open in IMG/M
3300031231\|Ga0170824_121791953	Not Available	1381	Open in IMG/M
3300031544\|Ga0318534_10659011	Not Available	593	Open in IMG/M
3300031545\|Ga0318541_10165857	Not Available	1216	Open in IMG/M
3300031546\|Ga0318538_10046957	Not Available	2094	Open in IMG/M
3300031546\|Ga0318538_10256485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	940	Open in IMG/M
3300031573\|Ga0310915_10030662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3355	Open in IMG/M
3300031573\|Ga0310915_10362863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1027	Open in IMG/M
3300031573\|Ga0310915_11018581	Not Available	577	Open in IMG/M
3300031573\|Ga0310915_11021021	Not Available	576	Open in IMG/M
3300031573\|Ga0310915_11134485	Not Available	542	Open in IMG/M
3300031640\|Ga0318555_10260485	Not Available	937	Open in IMG/M
3300031668\|Ga0318542_10349877	Not Available	760	Open in IMG/M
3300031680\|Ga0318574_10376344	Not Available	829	Open in IMG/M
3300031719\|Ga0306917_10452683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1005	Open in IMG/M
3300031719\|Ga0306917_11269236	Not Available	570	Open in IMG/M
3300031744\|Ga0306918_10988722	Not Available	654	Open in IMG/M
3300031754\|Ga0307475_10888537	Not Available	704	Open in IMG/M
3300031763\|Ga0318537_10369567	Not Available	529	Open in IMG/M
3300031764\|Ga0318535_10526524	Not Available	525	Open in IMG/M
3300031771\|Ga0318546_10245727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1231	Open in IMG/M
3300031779\|Ga0318566_10176897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1059	Open in IMG/M
3300031779\|Ga0318566_10385203	Not Available	691	Open in IMG/M
3300031781\|Ga0318547_10248950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1071	Open in IMG/M
3300031782\|Ga0318552_10439020	Not Available	666	Open in IMG/M
3300031793\|Ga0318548_10301696	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300031796\|Ga0318576_10175663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1004	Open in IMG/M
3300031798\|Ga0318523_10646318	Not Available	520	Open in IMG/M
3300031859\|Ga0318527_10333458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	646	Open in IMG/M
3300031879\|Ga0306919_10148418	Not Available	1708	Open in IMG/M
3300031879\|Ga0306919_10172953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1590	Open in IMG/M
3300031879\|Ga0306919_10479630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	958	Open in IMG/M
3300031890\|Ga0306925_10471747	All Organisms → cellular organisms → Bacteria → Acidobacteria	1339	Open in IMG/M
3300031890\|Ga0306925_11017462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	843	Open in IMG/M
3300031890\|Ga0306925_11130698	Not Available	789	Open in IMG/M
3300031890\|Ga0306925_12272112	Not Available	502	Open in IMG/M
3300031894\|Ga0318522_10113896	Not Available	1008	Open in IMG/M
3300031910\|Ga0306923_10798401	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300031910\|Ga0306923_11033762	Not Available	890	Open in IMG/M
3300031912\|Ga0306921_10199377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2345	Open in IMG/M
3300031912\|Ga0306921_10645658	Not Available	1220	Open in IMG/M
3300031912\|Ga0306921_11501533	Not Available	736	Open in IMG/M
3300031941\|Ga0310912_10700083	Not Available	785	Open in IMG/M
3300031942\|Ga0310916_10878390	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300031946\|Ga0310910_10202157	All Organisms → cellular organisms → Bacteria	1542	Open in IMG/M
3300031946\|Ga0310910_10703509	Not Available	798	Open in IMG/M
3300031946\|Ga0310910_10713848	Not Available	792	Open in IMG/M
3300031946\|Ga0310910_10774763	Not Available	756	Open in IMG/M
3300031947\|Ga0310909_10886298	Not Available	733	Open in IMG/M
3300031947\|Ga0310909_11344845	Not Available	573	Open in IMG/M
3300031954\|Ga0306926_11048491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	967	Open in IMG/M
3300031954\|Ga0306926_12755491	Not Available	532	Open in IMG/M
3300031959\|Ga0318530_10285227	Not Available	682	Open in IMG/M
3300032001\|Ga0306922_10347865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1590	Open in IMG/M
3300032001\|Ga0306922_10565696	All Organisms → cellular organisms → Bacteria → Acidobacteria	1207	Open in IMG/M
3300032001\|Ga0306922_10795109	Not Available	989	Open in IMG/M
3300032035\|Ga0310911_10425163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	769	Open in IMG/M
3300032051\|Ga0318532_10099079	Not Available	1027	Open in IMG/M
3300032055\|Ga0318575_10422592	Not Available	677	Open in IMG/M
3300032059\|Ga0318533_10138469	All Organisms → cellular organisms → Bacteria	1715	Open in IMG/M
3300032059\|Ga0318533_11090452	Not Available	585	Open in IMG/M
3300032065\|Ga0318513_10339659	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300032066\|Ga0318514_10188992	Not Available	1077	Open in IMG/M
3300032094\|Ga0318540_10374908	Not Available	687	Open in IMG/M
3300032261\|Ga0306920_100062716	All Organisms → cellular organisms → Bacteria	5425	Open in IMG/M
3300032261\|Ga0306920_100491090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1822	Open in IMG/M
3300032261\|Ga0306920_101932453	Not Available	829	Open in IMG/M
3300033289\|Ga0310914_10897814	Not Available	785	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.09%
Cave	Environmental → Terrestrial → Cave	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	96.36%
Loam	Environmental → Terrestrial → Soil → Loam	1.82%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.91%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	78.18%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.27%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.91%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.91%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	39.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	37.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.91%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.36%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.91%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.91%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.91%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.91%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.91%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1009147602	3300005332	Tropical Forest Soil	MVVLAHHRAADDFEAIRARMDELRRERTEAVSGEPIASPRPSSPSPSRPDAAANPGFVDASLD*
Ga0008090_100779191	3300005363	Tropical Rainforest Soil	MVVLAHNRAADDFEAIRARMEQLRRERAEAVRGEPIGSPQPSSPSPSRPGAAADPGFVDASMD*
Ga0070707_1021780791	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LPVMVVLAHRRAADDFETIRARVEELRRERAEALNGEPIASPQPSSPSPSRPGAAADPGFVDASMD*
Ga0099827_107362002	3300009090	Vadose Zone Soil	MLVLSHHCAADDFEAIRARMEELRRERAEAVRGEPIGSPQPSSPSPSRPGAAADPGFVDASMD*
Ga0099792_100462593	3300009143	Vadose Zone Soil	MLVLAHHCAADDFEAIRARMEELRRERAEAVRGEPIGSPQPSSPSPSRPGAAADPGFVDASMD*
Ga0126373_127145131	3300010048	Tropical Forest Soil	MIVLAHHSAADDFEAIRARMEELRRERAEAVIGSPQPSSPSPSRPGAAADPGFVDASMD*
Ga0126376_110348821	3300010359	Tropical Forest Soil	MVVLAHRPAADDFETIRARVEELRRERAEALNGEPIASPQPSSPSPSRPGAAADPGFVDPSID*
Ga0126372_103311191	3300010360	Tropical Forest Soil	SLRAADDFKTIRERMEQLRRERAEAVKGEPIASPQPSSPSPSGSRAAADPGFLDASID*
Ga0126372_109099662	3300010360	Tropical Forest Soil	MVVLTHNRAADDFEAIRARMEELRRERAEVVRGEPIGSPQPFSPSPSRPGAAADPGFVDASMD*
Ga0126378_104705282	3300010361	Tropical Forest Soil	MIFPASSASLPGMVVLTSLRAADDFKTIRERMEQLRRERAEAVKGEPIASPQPSSPSPSRARAAVDPGFLDASID*
Ga0126379_132238641	3300010366	Tropical Forest Soil	MVVLAHNRTADDFEAIRARMEQLRRERAEAVRGEPIGSPQPSSPSPSRPGAAADPGFVDASMD*
Ga0126381_1008300143	3300010376	Tropical Forest Soil	MVVLTSPRAADDFKTIRKRMEELRRERAEAVRGEPIASPQPSSPSRAAADPGFVDASID*
Ga0126381_1035472891	3300010376	Tropical Forest Soil	AHRPAADDFETIRARMEELRRERAEAVRGEPTASPQPPMPSPSCPGAAADPGFVDPSID*
Ga0126383_132851901	3300010398	Tropical Forest Soil	MVVLTSLRAADDFKTIRKRMEELRRERAEAVRGEPIASPQPSSPSRAAADPGFVDASID*
Ga0137363_102077503	3300012202	Vadose Zone Soil	MVVLAHHRAADDFEAIRARMDELRRERTEAVRGEPSASSQPSSPSPSRPGAAANPGFVDASLD*
Ga0137363_116385651	3300012202	Vadose Zone Soil	MLVLAHHCADDDFEAIRARMEELRRERAEAVRGEPIGSPQPSSPSPSRPGAAADPGFVDASMD*
Ga0137395_104756512	3300012917	Vadose Zone Soil	MLVRAHHCAADDFEAIRARMEELRRERAEAVRGEPIGSPQPSSPSPSRPGAAADPGFVDASMD*
Ga0137359_102436942	3300012923	Vadose Zone Soil	MIVLAHHCAADDFEAIRARMEELRRERAEAVRGEPIGSPQPSSPSPSRPGAAADPGFVDASMD*
Ga0126369_107493322	3300012971	Tropical Forest Soil	MVVLISPRAADDFKTIRKRMEELRRERAEAVRGEPIASPQPSLPSRAAADPGFVDASID*
Ga0126369_121230562	3300012971	Tropical Forest Soil	MVVLAHHRAADDFDAIRARMDELRRERTEAVSGEPIASPRPSSPSPSRPDAAANPGFVDASLD*
Ga0182036_103312682	3300016270	Soil	FFSAAPTIFPVMVVLAHHRAADDFEAIRARMEELRRERAEAVRGEPIGSPQPSSPSPSRPGAAADPGFVDASMD
Ga0182036_103661421	3300016270	Soil	MVWFFSAASTIFPVMVVLTHNRAADDFEAIRARMEQLRREQAEAVRGEPIGSPQPFSPSPSRPGAAADPGFVDASMD
Ga0182036_107633132	3300016270	Soil	VVLAHHRAADDFEAIRARMEELRRERAEAVRGEPIGSPQPSSPSPSHPGAAADPGFVDASMD
Ga0182033_105751763	3300016319	Soil	ADDFEAIRARMEELRRERAEAVRGEPIGSPQPSSPSPSHPGAAADPGFVDASMD
Ga0182033_106608183	3300016319	Soil	AHNRAADDFEAIRARMEQLRRERAEAVRGEPIGSPRPSSPSRPGAAADPGFVDASMD
Ga0182033_118891181	3300016319	Soil	LAHNRAADDFEAIRARMEQLRRERAEAVRGEPIGSPQPPSPSPSRPGAAADPGFVDASMD
Ga0182035_101466161	3300016341	Soil	MVVLAHNRAADDFEAIRARMEDLRRERAEAVRGEPIGSLQPSSPSPSRPGAAADPGFVDASMD
Ga0182035_102007384	3300016341	Soil	MVVLTSRRAADDFKTIRNRMEELRRERAEAVRSEPIASPQPSSPSLSRSRAAADPGFVDASID
Ga0182035_105576681	3300016341	Soil	DFDAIRARMDELRRERTEAVRGEPTASPQPSSPSPSRPGAAANPGFVDASMD
Ga0182032_110038541	3300016357	Soil	WFFSAASTIFPVMVVLTHNRAADDFEAIRARMEQLRREQAEAVRGEPIGSPQPSSPSPSRPGAAADPGFVDASMD
Ga0182032_114661812	3300016357	Soil	MVVLTHNRAADDFEAIRARMEQLRRERAEAVRGEPIGSPQPPSPSPSRPGAAADPGFVDASMD
Ga0182034_108592522	3300016371	Soil	SSAHNRAADDFEAIRARMEQLRRERAEAVRGEPIGSPRPSSPSRPGAAADPGFVDASMD
Ga0182040_114741071	3300016387	Soil	STIFPVMVVLTHNRAADDFEAIRARMEQLRREQAEAVRGEPIGSPQPFSPSPSRPGAAADPGFVDASMD
Ga0182037_116336281	3300016404	Soil	LLGMVVLTSPRAADDFKTIRKRMEELRRERAEAVRGEPIASPQPSSPSRAAADPGFVDASID
Ga0182039_110230072	3300016422	Soil	MVVLTSPLAADDFKTIRKRMEELRRERAEAVRGEPIPSPQPSSSSPSCSRAAADPDFVDASID
Ga0182039_121638101	3300016422	Soil	MVVLAHHRAADDFEAIRARMEELRRERAEAVRGEPIGSPQPSSPSPSCPGAAADPGFVNASMD
Ga0182038_108955501	3300016445	Soil	MVVLAHNHAADDFEAIRARMEQLRREQAEAVRGEPIGSPQPSSPSPSRPGAAADPGFVDASMD
Ga0182038_116350991	3300016445	Soil	FPVMVVLAHHRAADDFEAIRARMEELRRERAEAVRGEPIGSPQPSSPSPSHPGAAADPGFVDASMD
Ga0187783_101465931	3300017970	Tropical Peatland	MLPVMVVLAHHRAADDFKTIRARMEELRRERAEAVRGEPTASPQPSSPSPSRPGAVADSTFVDASMD
Ga0210384_118134831	3300021432	Soil	ISPVMLVLAHDCAADDFEAIRARMEELRRERAEAVRGEPIGSPQPSSPSPSRPGAAADPGFVDASMD
Ga0187846_100869002	3300021476	Biofilm	MLPVMVVLARQRAADDFETIRARMEELRRERAEAPRGEPIASPQPGSSSPSGHSAAADPGSVDASMD
Ga0126371_135278032	3300021560	Tropical Forest Soil	MVVLAHHRAADDFEAIRARMDELRRERTEAVSGEPIASPRPSSPSPSRPDAAANPGFVDASLD
Ga0209488_105860711	3300027903	Vadose Zone Soil	MLVLAHHCAADDFEAIRARMEELRRERAEAVRGEPIGSPQPSSPSPSRPGAAADPGFVDASMD
Ga0170824_1217919532	3300031231	Forest Soil	MLVLAHHCAADDFEAIRARMEELRRERAEAVRGEPIGSPQPSSPLPSRPGAAADPGFVDASMD
Ga0318534_106590111	3300031544	Soil	VLAHHRVADDFEAIRARMEELRRERAEAVIGSPQPSSPSPSRPGAAADPGFVDASMD
Ga0318541_101658571	3300031545	Soil	MVVLTSRRAADDFKTIRKRMEELRRERAEAVRGEPIASPQPSSPSRAAADPGFVDASID
Ga0318538_100469572	3300031546	Soil	MVVLAHHRAADDFEAIRARMEELRRERAEAVRGEPIGSPQPSSPSPSHPGAAADPGFVDASMD
Ga0318538_102564851	3300031546	Soil	MVVLTSPRAADDFKTIRKRMEELRRERAEAVRGEPIASPQPSSPSRAAADPGFVDASID
Ga0310915_100306623	3300031573	Soil	MVVLAHHRAADDFEAIRARMEELRRERAEAVRGEPIGSPQPSSPSPSRPGALADPGFVDASMD
Ga0310915_103628632	3300031573	Soil	MVVPTHYRAADDFDAIRARMDELRRERTEAVRGEPTASPQPSSPSPSRPGAAANPGFVDASMD
Ga0310915_110185811	3300031573	Soil	MIVLAHRRAADDFKAIRAQMEELRRERAEVVRGEPIGSPQPSSPSPSRPGAAADPGFVDASMD
Ga0310915_110210212	3300031573	Soil	MVVLAHHRAADDFEAIRARMEELRRERAEAVRGQPIGSPQPSSPSPSRPGAAADPGFVDASMD
Ga0310915_111344852	3300031573	Soil	AFFSAASTIFPVMVVLTHNRAADDFEAIRARMEQLRRERAEAVRGEPIGSPRPSSPSRPGAAADPGFVDASMD
Ga0318555_102604852	3300031640	Soil	MVVLAHHRAADDFEAIRARMEELRRERAEAVRGEPIGSPQPSSPSPSRPGAAADPGFVDASMD
Ga0318542_103498771	3300031668	Soil	FSAASTIFPVMVVLAHHRAADDFEAIRARMEELRRERAEAVRGQPIGSPQPSSPSPSRPGAAADPGFVDASMD
Ga0318574_103763442	3300031680	Soil	MVVLSHHRAADDFEAIRARMEELRRERAEAVRGEPIGSPQPSSPSPSRPGALADPGFVDASMD
Ga0306917_104526832	3300031719	Soil	MVVLAHNRAADDFEAIRARMEQLRRERAEAVRGEPIGSPQPPSPSPSRPGAAADPGFVDASMD
Ga0306917_112692361	3300031719	Soil	MVVLAHHRVADDFEAIRARMEELRRERAEAVIGSPQPSSPSPSRPGAAADPGFVDASMD
Ga0306918_109887222	3300031744	Soil	MLVLAHYRAADDFEAIRARMEDLRRERAEAVRGEPIGSLQPSSPSPSRPGAAADPGFVDASMD
Ga0307475_108885371	3300031754	Hardwood Forest Soil	LVFFSPASTIFPVMLVLAHHCAADDFEAIRARMEELRRERAEAVRGEPIGSPQPSSPSPSRPGAAADPGFVDASMD
Ga0318537_103695671	3300031763	Soil	MVVLSHHRAADDFEAIRARMEELRRERAEAVRGEPIGSPQPSSPSPSRPGAAADPGFVDASMD
Ga0318535_105265241	3300031764	Soil	IFFSAASTIFPVMVVLAHHRAADDFEAIRARMEELRRERAEVVRGEPIGSPQPSSPSPSRPGAAADPGFVDASMD
Ga0318546_102457272	3300031771	Soil	MVVPTHYRAADDFDGIRARMDELRRERTEAVRGEPTASPQPSSPSPSRPGAAANPGFVDASMD
Ga0318566_101768974	3300031779	Soil	LAHHSAADDFEAIRARMEELRRERAEAVIGSPQPSSPSPSRPGAAADPGFVDASMD
Ga0318566_103852031	3300031779	Soil	MVVLAHNRAADDFEAIRARMEELRRERAEAVIGSPQPSSPSPSRPGAAA
Ga0318547_102489501	3300031781	Soil	MVVLTHYRAADDFDAIRARMDELRRERTEAVRGEPTASPQPSSPSPSRPGAAANPGFVDASMD
Ga0318552_104390201	3300031782	Soil	MVVLAHNRAADDFEAIRARMEQLRREQAEAVRGEPIGSPQPSSPSPSRPGAAADPGFVDASMD
Ga0318548_103016961	3300031793	Soil	MIVLADDFEAIRARMEDLRRERAEAVRGEPIGSLQPSSPSPSRPGAAADPGFVDASMD
Ga0318576_101756631	3300031796	Soil	HHRAADDFEAIRARMEELRCERAEAVRGEPIGSPQPSSPSPSRPGAAADPGFVDASMD
Ga0318523_106463181	3300031798	Soil	MIVLAHRRAADDFEAIRARMEELRRERAEVVRGEPIGSPQPSSPSPCRPGAAADPGFVDASMD
Ga0318527_103334581	3300031859	Soil	MVVLSHHRAADDFEAIRARMEELRRERAEAVRGEPIGSLQPSSPSPSRPGAAADPGFVDASMD
Ga0306919_101484184	3300031879	Soil	MLVLAHHRAADDFEAIRARMEDLRRERAEAVRGEPIGSLQPSSPSPSRPGAAADPGFVDASMD
Ga0306919_101729531	3300031879	Soil	MIVLAHHSAADDFEAIRARMEELRRERAEAVIGSPQPSSPSPSRPGAAADPGFVDASMD
Ga0306919_104796302	3300031879	Soil	ILPVMVVPTHYRAADDFDAIRARMDELRRERTEAVRGEPTASPQPSSPSPSRPGAAANPGFVDASMD
Ga0306925_104717471	3300031890	Soil	MVVLTSPRAADDFKTIRKRMEELRRERAEAVRGEPIASPQPSSPTRAAADPGFVDASID
Ga0306925_110174622	3300031890	Soil	MVWFFSRPRLLYFPSWLSSAHNRAADDFEAIRARMEQLRRERAEAVRGEPIGSRQPSSPSPSRPGAAADPGFVDASMD
Ga0306925_111306982	3300031890	Soil	MIVLAHRRAADDFKAIRARMEELRRERAEVVRGEPIGSPQPSSPSPSRPGAAADPGFVDASMD
Ga0306925_122721121	3300031890	Soil	ADDFEAIRARMEQLRREQAEAVRGEPIGSPQPSSPSPSRPGAAADPGFVDASMD
Ga0318522_101138962	3300031894	Soil	MVVLTHNRAADDFEAIRARMEQLRREQAEAVRGEPIGSPQPSSPSPSRPGAAADPGFVDASMD
Ga0306923_107984011	3300031910	Soil	VMVVLAHHRAADDFEAIRARMEELRRERAEAVRGEPIGSLQPSSPSPSRPGAAADPGFVDASMD
Ga0306923_110337621	3300031910	Soil	MVVLTSPRAADDFKTIRKRVEELRRERAEAVRGGPIASPQPSSPSRAAADPGFVDASID
Ga0306921_101993771	3300031912	Soil	MIVLAHRRAADDFEAIRARMEELRRERAEVVRGEPIGSPQPSSPSPSRPGAAADPGFVDA
Ga0306921_106456583	3300031912	Soil	LSSAHNRAADDFEAIRARMEQLRRERAEAVRGEPIGSPRPSSPSRPGAAADPGFVDASMD
Ga0306921_115015331	3300031912	Soil	ASTIFPVMVVLAHHRAADDFEAIRARMEELRRERAEAVRGEPIGSPQPSSPSPSHPGAAADPGFVDASMD
Ga0310912_107000832	3300031941	Soil	IFPVMVVLAHHRAADDFEAIRARMEELRRERAEAVRGEPIGSPQPSSPSPSHPGAAADPGFVDASMD
Ga0310916_108783901	3300031942	Soil	MVVLAHHRAADDFEAIRARMEELRRERAEAVRGEPIGSPQPSSPSPSCPGAAADPGFVDASMD
Ga0310910_102021574	3300031946	Soil	FFSAAPTIFPVMVVLAHHRAADDFEAIRARMEELRRERAEAVRGEPIGSPQPSSPSPSRPGAAADPGFVDASVD
Ga0310910_107035091	3300031946	Soil	MVVLAHNRAADDFEAIRARMEQLRRERAEAVRGEPIGSRQPSSPSPSRPGAAADPGFVDASMD
Ga0310910_107138482	3300031946	Soil	MVWFFSRPRLLYFPSWLSSAHNRAADDFEAIRARMEQLRRERAEAVRGEPIGSPRPSSPSRPGAAADPGFVDASMD
Ga0310910_107747631	3300031946	Soil	MVWFFSAASTIFPVMVVLTHNRAADDFEAIRARMEQLRREQAEAVRGEPIGSPQPSSPSPSRPGAAADPGFVDASMD
Ga0310909_108862982	3300031947	Soil	MVVLAHHRAADDFEAIRARMEELRRERAEAVRGEPIGSPQPSSPSPSRPGAAADPGFVDASVD
Ga0310909_113448451	3300031947	Soil	HRAADDFEAIRARMEELRRERAEAVRGEPIGSPQPSSPSPSRPGAAADPGFVDASMD
Ga0306926_110484914	3300031954	Soil	ADDFEAIRARMEELRRERAEAVRGEPIGSPQPSSPSPSRPGAAADPGFVDASMD
Ga0306926_127554911	3300031954	Soil	HHRAADDFQAIRARMEELRRERAEAVRCEPIGSPQPSSPSPSRPGAAADPGFVDASMD
Ga0318530_102852271	3300031959	Soil	TIFPVMVVLAHNRAADDFEAIRARMEQLRREQAEAVRGEPIGPPQPSSPSPSRPGAAADPGFVDASMD
Ga0306922_103478651	3300032001	Soil	DFEAIRARMEQLRRERAEAVRGEPIGSPQPSSPSPSRPGAAADPGFVDASMD
Ga0306922_105656964	3300032001	Soil	RAADDFKTIRKRMEELRRERAEAVRGEPIASPQPSSPSRAAADPGFVDASID
Ga0306922_107951093	3300032001	Soil	VVLAHNRAADDFEAIRARMEQLRRERAEAVRGEPIGSPQPSSPSRPGAAADPGFVDASMD
Ga0310911_104251632	3300032035	Soil	ADDFDAIRARMDELRRERTEAVRGEPTASPQPSSPSPSRPGAAANPGFVDASMD
Ga0318532_100990791	3300032051	Soil	AASTIFPVMVVLSHHRAADDFEAIRARMEELRRERAEAVRGEPIGSPQPSSPSPSRPGAAADPGFVDASMD
Ga0318575_104225921	3300032055	Soil	MVVLAHHRAADDFEAIRARMEELRRERAEAVIGSPQPSSPSPSRPGAAADPGFVDASMD
Ga0318533_101384692	3300032059	Soil	MVVLAHHRAADDFKTIRTRMEELRRERTEALRGEPIASPQPSLPSPSRPGAAADPGFVDASMD
Ga0318533_110904522	3300032059	Soil	MVVLAHNRAADDFEAIRARMEQLRRERAEAVRGEPIGSPQPSSPSPSRPGALADPGFVDASMD
Ga0318513_103396593	3300032065	Soil	RRMIFFSAAPTIFPVMVVLAHHRAADDFEAIRARMEQLRRERAEAVRGEPIGSPQPSSPSPSRPGAAADPGFVDASMD
Ga0318514_101889922	3300032066	Soil	MVVLTSRRAADDFKTIRKRMEELRRERAEAVRGEPIASPQPSSPSRAAADPGFVDASMD
Ga0318540_103749082	3300032094	Soil	MVVLAHHRAADDFEAIRARMEQLRRERAEAVRGEPIGSPQPPSPSPSRPGAAADPGFVDASMD
Ga0306920_1000627168	3300032261	Soil	DDFEAIRARMEQLRREQAEAVRGEPIGSPQPSSPSPSRPGAAADPGFVDASMD
Ga0306920_1004910902	3300032261	Soil	MIVLAHRRAADDFEAIRARMEELRRERAEVVRGEPIGSPQPSSPSPSRPGAAADPGFVDASMD
Ga0306920_1019324532	3300032261	Soil	HHRAADDFEAIRARMEELRRERAEAVRGEPIGSLQPSSPSPSRPGAAADPGFVDASMD
Ga0310914_108978142	3300033289	Soil	SWLSSAHNRAADDFEAIRARMEQLRRERAEAVRGEPIGSPRPSSPSRPGAAADPGFVDASMD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086525

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences