Metagenome / Metatranscriptome Family F086670

Basic Information
Family ID	F086670
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	100 residues
Representative Sequence	IGLVVAFIVFKFGTQLSKAVSDAYKNYQTWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGTPATKHATNN
Number of Associated Samples	75
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	97.27 %
% of genes from short scaffolds (< 2000 bps)	76.36 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Archaea (96.364 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (50.000 % of family members)
Environment Ontology (ENVO)	Unclassified (44.545 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (53.636 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 81.00% β-sheet: 0.00% Coil/Unstructured: 19.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF07678	TED_complement	12.73
PF02538	Hydantoinase_B	10.00
PF00801	PKD	1.82
PF08241	Methyltransf_11	0.91
PF01497	Peripla_BP_2	0.91
PF13692	Glyco_trans_1_4	0.91
PF16916	ZT_dimer	0.91
PF08818	DUF1801	0.91
PF13249	SQHop_cyclase_N	0.91
PF00162	PGK	0.91
PF01230	HIT	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0146	N-methylhydantoinase B/oxoprolinase/acetone carboxylase, alpha subunit	Amino acid transport and metabolism [E]	20.00
COG0126	3-phosphoglycerate kinase	Carbohydrate transport and metabolism [G]	0.91
COG0614	ABC-type Fe3+-hydroxamate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.91
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.91
COG4558	ABC-type hemin transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.91
COG4592	ABC-type Fe2+-enterobactin transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.91
COG4594	ABC-type Fe3+-citrate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.91
COG4607	ABC-type enterochelin transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.91
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.91
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.91

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.36 %
Unclassified	root	N/A	3.64 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.36 %
Unclassified	root	N/A	3.64 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	96.36 %
Unclassified	root	N/A	3.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	3.64 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.91 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	3.64 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	0.91 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	3.64 %
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	0.91 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	3.64 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.91 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10118793	All Organisms → cellular organisms → Archaea	757	Open in IMG/M
3300002560\|JGI25383J37093_10006025	All Organisms → cellular organisms → Archaea	3859	Open in IMG/M
3300002560\|JGI25383J37093_10188876	All Organisms → cellular organisms → Archaea	542	Open in IMG/M
3300002561\|JGI25384J37096_10241671	All Organisms → cellular organisms → Archaea	527	Open in IMG/M
3300002562\|JGI25382J37095_10153251	All Organisms → cellular organisms → Archaea	749	Open in IMG/M
3300002562\|JGI25382J37095_10278323	All Organisms → cellular organisms → Archaea	503	Open in IMG/M
3300002908\|JGI25382J43887_10058673	All Organisms → cellular organisms → Archaea	2086	Open in IMG/M
3300002912\|JGI25386J43895_10170513	All Organisms → cellular organisms → Archaea	546	Open in IMG/M
3300002912\|JGI25386J43895_10179344	All Organisms → cellular organisms → Archaea	532	Open in IMG/M
3300005171\|Ga0066677_10146533	All Organisms → cellular organisms → Archaea	1290	Open in IMG/M
3300005174\|Ga0066680_10453880	All Organisms → cellular organisms → Archaea	809	Open in IMG/M
3300005174\|Ga0066680_10764843	All Organisms → cellular organisms → Archaea	585	Open in IMG/M
3300005178\|Ga0066688_10722704	All Organisms → cellular organisms → Archaea	630	Open in IMG/M
3300005181\|Ga0066678_10970593	All Organisms → cellular organisms → Archaea	552	Open in IMG/M
3300005445\|Ga0070708_101790404	All Organisms → cellular organisms → Archaea	570	Open in IMG/M
3300005446\|Ga0066686_11122142	All Organisms → cellular organisms → Archaea	504	Open in IMG/M
3300005518\|Ga0070699_101658804	All Organisms → cellular organisms → Archaea	585	Open in IMG/M
3300005536\|Ga0070697_101922821	All Organisms → cellular organisms → Archaea	529	Open in IMG/M
3300005555\|Ga0066692_10989245	All Organisms → cellular organisms → Archaea	515	Open in IMG/M
3300005556\|Ga0066707_10030529	Not Available	2977	Open in IMG/M
3300005556\|Ga0066707_11001389	All Organisms → cellular organisms → Archaea	509	Open in IMG/M
3300005557\|Ga0066704_10475650	All Organisms → cellular organisms → Archaea	825	Open in IMG/M
3300005568\|Ga0066703_10247462	All Organisms → cellular organisms → Archaea	1082	Open in IMG/M
3300005586\|Ga0066691_10662533	All Organisms → cellular organisms → Archaea	618	Open in IMG/M
3300005586\|Ga0066691_10866748	All Organisms → cellular organisms → Archaea	531	Open in IMG/M
3300007255\|Ga0099791_10328414	All Organisms → cellular organisms → Archaea	731	Open in IMG/M
3300007255\|Ga0099791_10498854	All Organisms → cellular organisms → Archaea	591	Open in IMG/M
3300007255\|Ga0099791_10654150	All Organisms → cellular organisms → Archaea	516	Open in IMG/M
3300007258\|Ga0099793_10003519	All Organisms → cellular organisms → Archaea	5440	Open in IMG/M
3300007258\|Ga0099793_10690199	All Organisms → cellular organisms → Archaea	515	Open in IMG/M
3300007265\|Ga0099794_10090178	All Organisms → cellular organisms → Archaea	1521	Open in IMG/M
3300009012\|Ga0066710_100184395	All Organisms → cellular organisms → Archaea	2952	Open in IMG/M
3300009012\|Ga0066710_101164783	All Organisms → cellular organisms → Archaea	1194	Open in IMG/M
3300009012\|Ga0066710_103465909	All Organisms → cellular organisms → Archaea	598	Open in IMG/M
3300009038\|Ga0099829_10362982	All Organisms → cellular organisms → Archaea	1194	Open in IMG/M
3300009038\|Ga0099829_11020133	All Organisms → cellular organisms → Archaea	686	Open in IMG/M
3300009088\|Ga0099830_10973087	All Organisms → cellular organisms → Archaea	702	Open in IMG/M
3300009088\|Ga0099830_11110033	All Organisms → cellular organisms → Archaea	656	Open in IMG/M
3300009089\|Ga0099828_10499744	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1096	Open in IMG/M
3300009090\|Ga0099827_10054620	All Organisms → cellular organisms → Archaea	3020	Open in IMG/M
3300009090\|Ga0099827_10056676	All Organisms → cellular organisms → Archaea	2970	Open in IMG/M
3300009090\|Ga0099827_10147933	All Organisms → cellular organisms → Archaea	1920	Open in IMG/M
3300009137\|Ga0066709_101569805	All Organisms → cellular organisms → Archaea	944	Open in IMG/M
3300009137\|Ga0066709_102469612	All Organisms → cellular organisms → Archaea	702	Open in IMG/M
3300009137\|Ga0066709_102883640	All Organisms → cellular organisms → Archaea	635	Open in IMG/M
3300010087\|Ga0127492_1059887	All Organisms → cellular organisms → Archaea	635	Open in IMG/M
3300010096\|Ga0127473_1107716	All Organisms → cellular organisms → Archaea	528	Open in IMG/M
3300010304\|Ga0134088_10602542	All Organisms → cellular organisms → Archaea	546	Open in IMG/M
3300010336\|Ga0134071_10004062	All Organisms → cellular organisms → Archaea	5528	Open in IMG/M
3300010336\|Ga0134071_10769541	All Organisms → cellular organisms → Archaea	513	Open in IMG/M
3300011271\|Ga0137393_11332883	All Organisms → cellular organisms → Archaea	607	Open in IMG/M
3300011271\|Ga0137393_11705716	All Organisms → cellular organisms → Archaea	519	Open in IMG/M
3300012096\|Ga0137389_10266257	All Organisms → cellular organisms → Archaea	1443	Open in IMG/M
3300012096\|Ga0137389_10913443	All Organisms → cellular organisms → Archaea	753	Open in IMG/M
3300012189\|Ga0137388_11645323	All Organisms → cellular organisms → Archaea	577	Open in IMG/M
3300012199\|Ga0137383_10027978	All Organisms → cellular organisms → Archaea	3946	Open in IMG/M
3300012199\|Ga0137383_10037172	All Organisms → cellular organisms → Archaea	3448	Open in IMG/M
3300012203\|Ga0137399_10103190	All Organisms → cellular organisms → Archaea	2209	Open in IMG/M
3300012203\|Ga0137399_10174173	All Organisms → cellular organisms → Archaea	1733	Open in IMG/M
3300012205\|Ga0137362_11225704	All Organisms → cellular organisms → Archaea	635	Open in IMG/M
3300012206\|Ga0137380_10197700	All Organisms → cellular organisms → Archaea	1824	Open in IMG/M
3300012207\|Ga0137381_10004982	All Organisms → cellular organisms → Archaea	9673	Open in IMG/M
3300012207\|Ga0137381_10039431	All Organisms → cellular organisms → Archaea	3855	Open in IMG/M
3300012209\|Ga0137379_10035717	All Organisms → cellular organisms → Archaea	4793	Open in IMG/M
3300012209\|Ga0137379_10114057	All Organisms → cellular organisms → Archaea	2600	Open in IMG/M
3300012209\|Ga0137379_11743774	All Organisms → cellular organisms → Archaea	518	Open in IMG/M
3300012210\|Ga0137378_10914234	All Organisms → cellular organisms → Archaea	791	Open in IMG/M
3300012210\|Ga0137378_11148784	All Organisms → cellular organisms → Archaea	692	Open in IMG/M
3300012211\|Ga0137377_10106125	All Organisms → cellular organisms → Archaea	2665	Open in IMG/M
3300012211\|Ga0137377_10157832	All Organisms → cellular organisms → Archaea	2174	Open in IMG/M
3300012349\|Ga0137387_10221549	All Organisms → cellular organisms → Archaea	1360	Open in IMG/M
3300012351\|Ga0137386_10812328	All Organisms → cellular organisms → Archaea	672	Open in IMG/M
3300012356\|Ga0137371_10057668	All Organisms → cellular organisms → Archaea	3007	Open in IMG/M
3300012359\|Ga0137385_10057909	All Organisms → cellular organisms → Archaea	3456	Open in IMG/M
3300012361\|Ga0137360_11678049	All Organisms → cellular organisms → Archaea	541	Open in IMG/M
3300012362\|Ga0137361_11473655	All Organisms → cellular organisms → Archaea	603	Open in IMG/M
3300012363\|Ga0137390_11454269	All Organisms → cellular organisms → Archaea	628	Open in IMG/M
3300012389\|Ga0134040_1165912	All Organisms → cellular organisms → Archaea	671	Open in IMG/M
3300012918\|Ga0137396_10365565	All Organisms → cellular organisms → Archaea	1068	Open in IMG/M
3300012925\|Ga0137419_10156736	All Organisms → cellular organisms → Archaea	1649	Open in IMG/M
3300012925\|Ga0137419_11790298	All Organisms → cellular organisms → Archaea	525	Open in IMG/M
3300012927\|Ga0137416_10039044	All Organisms → cellular organisms → Archaea → Euryarchaeota	3240	Open in IMG/M
3300012927\|Ga0137416_11425071	All Organisms → cellular organisms → Archaea	628	Open in IMG/M
3300012972\|Ga0134077_10164460	All Organisms → cellular organisms → Archaea	890	Open in IMG/M
3300015241\|Ga0137418_10186855	All Organisms → cellular organisms → Archaea	1800	Open in IMG/M
3300017659\|Ga0134083_10243062	All Organisms → cellular organisms → Archaea	751	Open in IMG/M
3300018468\|Ga0066662_11054077	All Organisms → cellular organisms → Archaea	809	Open in IMG/M
3300018468\|Ga0066662_11568175	All Organisms → cellular organisms → Archaea	686	Open in IMG/M
3300021307\|Ga0179585_1184031	All Organisms → cellular organisms → Archaea	539	Open in IMG/M
3300025922\|Ga0207646_11400162	All Organisms → cellular organisms → Archaea	608	Open in IMG/M
3300026297\|Ga0209237_1253601	All Organisms → cellular organisms → Archaea	540	Open in IMG/M
3300026298\|Ga0209236_1001631	All Organisms → cellular organisms → Archaea	13553	Open in IMG/M
3300026298\|Ga0209236_1016672	All Organisms → cellular organisms → Archaea	4198	Open in IMG/M
3300026298\|Ga0209236_1296929	All Organisms → cellular organisms → Archaea	522	Open in IMG/M
3300026318\|Ga0209471_1005559	All Organisms → cellular organisms → Archaea	6886	Open in IMG/M
3300026326\|Ga0209801_1307330	All Organisms → cellular organisms → Archaea	563	Open in IMG/M
3300026333\|Ga0209158_1151314	All Organisms → cellular organisms → Archaea	848	Open in IMG/M
3300026524\|Ga0209690_1295883	All Organisms → cellular organisms → Archaea	513	Open in IMG/M
3300026529\|Ga0209806_1274198	All Organisms → cellular organisms → Archaea	567	Open in IMG/M
3300026537\|Ga0209157_1267439	All Organisms → cellular organisms → Archaea	650	Open in IMG/M
3300026540\|Ga0209376_1287538	All Organisms → cellular organisms → Archaea	662	Open in IMG/M
3300026547\|Ga0209156_10291729	All Organisms → cellular organisms → Archaea	739	Open in IMG/M
3300027655\|Ga0209388_1154860	All Organisms → cellular organisms → Archaea	647	Open in IMG/M
3300027671\|Ga0209588_1066178	All Organisms → cellular organisms → Archaea	1168	Open in IMG/M
3300027846\|Ga0209180_10524843	All Organisms → cellular organisms → Archaea	661	Open in IMG/M
3300028536\|Ga0137415_10893489	All Organisms → cellular organisms → Archaea	698	Open in IMG/M
3300028673\|Ga0257175_1103887	All Organisms → cellular organisms → Archaea	558	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	95.45%
Loam	Environmental → Terrestrial → Soil → Loam	4.55%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	57.27%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	37.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.64%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.91%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.91%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	50.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	19.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	18.18%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	7.27%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010087	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010096	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012389	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021307	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_101187931	3300002558	Grasslands Soil	LAKAVSDAYKNYQTYVPLLAYIFQIIAIVILYSVSSGIATQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDNSSGTKHSTNN*
JGI25383J37093_100060251	3300002560	Grasslands Soil	IANIVVFMIGLVVAFIVFKFGTQLSKAVSDAYKNYQTWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGSPATKHATNN*
JGI25383J37093_101888761	3300002560	Grasslands Soil	VVIEAVVLGFPGISQNISGSTISIANIVVFMIGLVVALIVFKFGTQLSKAVSDAYKNYQAWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVIXMVHALEGPSASKHSTNN*
JGI25384J37096_102416711	3300002561	Grasslands Soil	KAVSDAYKNYQTYVPLLAYIFQIIAIVILYSVSSGIATQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGQSATKHSTNN*
JGI25382J37095_101532511	3300002562	Grasslands Soil	IVFKFGTQLAKAVSDAYKNYQTYVPLLAYIFQIIAIVILYSVSSGIATQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDNSSGTKHSTNN*
JGI25382J37095_102783231	3300002562	Grasslands Soil	NISGSSISIANIAVFMIGLVVALIVFKFGTQLAKAVSDAYKNYQTYVPLLAYIFQIIAIVILYNVSNGIATQYFTSAPWAYPLIFLLIALMPTLKVVVNLVHNLEGSSGTKHSQNN*
JGI25382J43887_100586731	3300002908	Grasslands Soil	SKAVSDAYKNYQTYVPLLAYIFQIIAIVILYSVSSGIATQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGQSATKHSTNN*
JGI25386J43895_101705131	3300002912	Grasslands Soil	ISIANIAVFMIGLVVAFIVFKFGTQLSKAVSDAYKNYQTWVPLLAYIFQIIAIVILYSVSSGIATQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDNSSGTKHSTNN*
JGI25386J43895_101793442	3300002912	Grasslands Soil	MIGLVVALIVFKFGTQLSKAVSDAYKNYQAWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVINMVHALEGPSASKHSTNN*
Ga0066677_101465331	3300005171	Soil	NIVVFMIGLVVALIVFKFGTQLSKAVSDAYKNYQAWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVINMVHALEGPSASKHSTNN*
Ga0066680_104538801	3300005174	Soil	ISIANIAVFMIGLVVAFIVFKFGTQLSKAVSDAYKNYQTWVPLLAYIFQIIAIVILYSVSSGIATQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHAFDGQSATKHSTNN*
Ga0066680_107648431	3300005174	Soil	AVVLGFPGITQNISGSTISIANIAVFMIGLVVAFIVFKFGTQLAKAVSDAYKNYQTWVPLLAYIFQIIAIVILYSVSSGIATQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDNSSGTKHSTNN*
Ga0066688_107227041	3300005178	Soil	AYKNYQAWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVINMVHALEGPSATKHSTNN*
Ga0066678_109705931	3300005181	Soil	YQAWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVINMVHALEGPSASKHSTNN*
Ga0070708_1017904041	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	KAVSDAYKNYQTWVPLLAYIFQIIAIVILYSVSSGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALEGPSATKHSTNN*
Ga0066686_111221421	3300005446	Soil	FGTQLAKAVSDAYKNYQAWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVINMVHALEGPSASKHSTNN*
Ga0070699_1016588041	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	IEAVVLGFPGISQNITGSTISIANIVVFMIGLVVAFVVFKFGTQLSKAVSDAYKNYQTWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGSPATKHATNN*
Ga0070697_1019228211	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	GISQNITGSTISIANIVVFMIGLVVAFIVFKFGTQLSKAVSDAYKNYQTWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGTSTAKHTTNN
Ga0066692_109892451	3300005555	Soil	KAVSDAYKNYQTWVPLLAYIFQIIAIVILYSVSNGIATQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALEGPSATKHSTNN*
Ga0066707_100305294	3300005556	Soil	YQAWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVINMVHALEGPSATKHSTNN*
Ga0066707_110013891	3300005556	Soil	VSDAYKNYQAWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVINMVHALEGPSASKHSTNN*
Ga0066704_104756502	3300005557	Soil	GSTISIANIVVFMIGLVVAFIVFKFGTQLSKAVSDAYKNYQTWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGTPTAKHATNN*
Ga0066703_102474622	3300005568	Soil	VFMIGLVVALIVFKFGTQLAKAVSDAYKNYQTYVPLLAYIFQIIAIVILYNVSSGIATQYFTSAPWAYPLIFLLIALMPTLKVVVNLVHNLEGSSATKHSQNN*
Ga0066691_106625332	3300005586	Soil	ANIVVFMIGLVVALIVFKFGTQLSKAVSDAYKNYQTYVPLLAYIFQIIAIVILYSVSSGIATQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDNSSGTKHSTNN*
Ga0066691_108667481	3300005586	Soil	NISGSSISIANIAVFMIGLVVALIVFKFGTQLAKAVSDAYKNYQTYVPLLAYIFQIIAIVILYNVSSGIATQYFTSAPWAYPLIFLLIALMPTLKVVVNLVHNLEGSSATKHSQNN*
Ga0099791_103284141	3300007255	Vadose Zone Soil	ISIASIAVFLIGLVVAFIVFKFGTQLSKAVSDAYKNYQTWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGASTTKHSTNN*
Ga0099791_104988541	3300007255	Vadose Zone Soil	IGLVVAFIVFKFGTQLSKAVSDAYKNYQTWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGTPTAKHATNN*
Ga0099791_106541501	3300007255	Vadose Zone Soil	STISIANIAVFMIGLVVALIVFKFGTQLSKAVSDAYKSYQTWVPLLAYIFQIIAIVILYSVSSGIATQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGQTATKHTTNN*
Ga0099793_100035196	3300007258	Vadose Zone Soil	IASIVVFMIGLVVAFIVFKFGTQLSKAVSDAYKNYQTWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGSSTTKHTTNN*
Ga0099793_106901991	3300007258	Vadose Zone Soil	ALIVFKFGTQLAKAVSDAYKNYQTYVPLLAYIFQIIAIVILYSVSSGIATQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGASTTKHSTNN*
Ga0099794_100901782	3300007265	Vadose Zone Soil	LSKAVSDAYKSYQTWVPLLAYIFQIIAIVILYSVSSGIATQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGQTATKHTTNN*
Ga0066710_1001843951	3300009012	Grasslands Soil	NIAVFMIGLVVAFIVFKFGTQLAKAVSDAYKNYQTWVPLLAYIFQIIAIVILYSVSSGIATQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDNSSGTKHSTNN
Ga0066710_1011647832	3300009012	Grasslands Soil	IGLVVALIVFKFGTQLSKAVSDAYKNYQAWVPLLAYIFQITAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVINMVHALEGPSASKHSTNN
Ga0066710_1034659091	3300009012	Grasslands Soil	KFGTQLAKAVSDAYKNYQAWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVINMVHALEGPSASKHSTNN
Ga0099829_103629822	3300009038	Vadose Zone Soil	SDAYKNYQTWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGTPTAKHATNN*
Ga0099829_110201331	3300009038	Vadose Zone Soil	GISGTQISIASLAVFIIGLVVTFIVLKFGTQISTTVHENFKAYRAWTPVLAYFFQILAIVILYSVSSGIASPYFSSAPWAYPLIFLLLALIPTLKVVTNVVHALEGQTHKTSQN*
Ga0099830_109730871	3300009088	Vadose Zone Soil	VSDAYKNYETWVPLLAYIFQIIAIVILYSVSSGIATQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGQTATKHTTNN*
Ga0099830_111100331	3300009088	Vadose Zone Soil	KFGTQLSKAVSDAYKNYQTWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGTPTTKHATNN*
Ga0099828_101431262	3300009089	Vadose Zone Soil	LLAYIFQIIAIVILYSVSSGIATQYFTSAPWAYPLIFLLIALLPTLRVVINLVHALDGQSATKHTTNN*
Ga0099828_104997442	3300009089	Vadose Zone Soil	QLSKAVSDAYKNYETWVPLLAYIFQIIAIVILYSVSSGIATQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDNSSGTKHSTNN*
Ga0099827_100546201	3300009090	Vadose Zone Soil	TISIANIVVFMIGLVVAFIVFKFGTQLSKAVSDAYKNYQTWVPLLAYIFQIIAIVILYSVSNGIATQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGTPTAKHSTNN*
Ga0099827_100566761	3300009090	Vadose Zone Soil	NIVVFMIGLVVAFIVFKFGTQLSKAVSDAYKNYQTWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGTPATKHATNN*
Ga0099827_101479331	3300009090	Vadose Zone Soil	LLAYIFQIIAIVILYSVSSGIATQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDNSSGTKHSTNN*
Ga0066709_1015698052	3300009137	Grasslands Soil	IGLVVALIVFKFGTQLSKAVSDAYKNYQAWVPLLAYIFQITAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVINMVHALEGPSASKHSTNN*
Ga0066709_1024696121	3300009137	Grasslands Soil	VLGFPGISQNISGSTISIANIVVFMIGLVVALIVFKFGTQLAKAVSDAYKNYQAWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVINMVHALEGPSASKHSTNN*
Ga0066709_1028836401	3300009137	Grasslands Soil	IVFKFGTQLSKAVSDAYKNYQAWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVINMVHALEGPSASKHSTNN*
Ga0127492_10598871	3300010087	Grasslands Soil	VVIEAVVLGFPGISQNISGSTISIANIVVFMIGLVVALIVFKFGTQLSKAVSDAYKNYQAWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVINMVHALEGPSATKHSTNN*
Ga0127473_11077161	3300010096	Grasslands Soil	SGRNISIANIVVFMIGLVVALIVFKFGTQLAKSVSDAYKNYQAWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVINMVHALEGPSASKHSTNN*
Ga0134088_106025421	3300010304	Grasslands Soil	KFGTQLAKAVSDAYKNYQAWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVINMVHALEGPSASKHSTNN*
Ga0134071_100040625	3300010336	Grasslands Soil	VVLGFPGISQNISGSTISIANIVVFMIGLVVALIVFKFGTQLSKAVSDAYKNYQTWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALEGPSATKHSTNN*
Ga0134071_107695411	3300010336	Grasslands Soil	VVALIVFKFGIQLSKAVSDAYKNYQAWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVINMVHALEGPSASKHSTNN*
Ga0137393_113328831	3300011271	Vadose Zone Soil	IVFKFGTQLSKAVSDAYKNYQTWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGTPTAKHAANN*
Ga0137393_117057161	3300011271	Vadose Zone Soil	TQLSKAVSDAYKNYETWVPLLAYIFQIIAIVILYSVSSGIATQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDNSSGTKHSTNN*
Ga0137389_102662572	3300012096	Vadose Zone Soil	FKFGTQLSKAVSDAYKNYQTYVPLLAYIFQIIAIVILYSVSSGIATQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGSPATKHATNN*
Ga0137389_109134432	3300012096	Vadose Zone Soil	IGLVVAFIVLKFGTQLATATSEAYKAYKNWTPLVAYFFEIVAIAILYSVSSSVASPYFTSAPWAYPLIFLMIALIPTLKVVVNLVHALEGHPTQHSN*
Ga0137389_113430252	3300012096	Vadose Zone Soil	PLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGTPTAKHATNN*
Ga0137388_116453231	3300012189	Vadose Zone Soil	SDAYKNYQTYVPLLAYIFQIIAIVILYSVSSGIATQYFTSAPWAYPLIFLLIALLPTLRVVINLVHALDGQSATKHTTNN*
Ga0137383_100279781	3300012199	Vadose Zone Soil	VFKFGTQLSKAVSDAYKNYQTWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGTPATKHATNN*
Ga0137383_100371724	3300012199	Vadose Zone Soil	KAVSDAYKNYQTWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGTPTAKHATNN*
Ga0137399_101031902	3300012203	Vadose Zone Soil	GLVVALIVFKFGTQLSKAVSDAYKNYQTWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHAIEGPSATKHSTNN*
Ga0137399_101741731	3300012203	Vadose Zone Soil	NISGSTISIANVAVFCIGLVVALIVFKFGTQLSRAVSDAYKNYQSWVPLLAYIFQIIAIVILYNVSSGIASPSFASAPWAYPLIFLLIALIPTTKVVVNIVHALEGSTPAKHSQNN*
Ga0137362_112257042	3300012205	Vadose Zone Soil	GFPGIGQNISGSTISIANIAVFMIGLVVALIVFKFGTQLSKAVSDAYKNYQTYVPLLAYIFQIIAIVILYSVSSGIATQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGASTTKHSTNN*
Ga0137380_100343415	3300012206	Vadose Zone Soil	VPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGTPTAKHATNN*
Ga0137380_101977002	3300012206	Vadose Zone Soil	KFGTQLSKAVSDAYKNYQTYVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVINLVHALEGPSASKHSTNN*
Ga0137381_100049821	3300012207	Vadose Zone Soil	IGLVVAFIVFKFGTQLAKAVSDAYKNYQTWVPLLAYIFQIIAIVILYSVSSGIATQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDNSSGTKHSTNN*
Ga0137381_100394311	3300012207	Vadose Zone Soil	ISIANIVVFMIGLVVAFIVFKFGTQLSKAVSDAYKNYQTWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGTPATKHATNN*
Ga0137379_100357171	3300012209	Vadose Zone Soil	ITGSTISIANIVVFMIGLVVAFIVFKFGTQLSKAVSDAYKNYQTWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGTPTAKHATNN*
Ga0137379_101140571	3300012209	Vadose Zone Soil	NYQTYVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVINLVHALEGPSASKHSTNN*
Ga0137379_117437741	3300012209	Vadose Zone Soil	ITGSTISIANIVVFMIGLVVAFIVFKFGTQLSKAVSDAYKNYQTWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGTSTTKHSTNN*
Ga0137378_109142341	3300012210	Vadose Zone Soil	ISIANIVVFMIGLVVAFIVFKFGTQLSKAVSDAYKNYETWVPLLAYIFQIIAIVILYSVSNGIANQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGQSATKHSTNN*
Ga0137378_111487841	3300012210	Vadose Zone Soil	VFMIGLVVAFIVFKFGTQLSKAVSDAYKNYQTWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGTPTAKHATNN*
Ga0137377_101061254	3300012211	Vadose Zone Soil	VAFIVFKFGTQLSKAVSDAYKNYQTWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGTPTAKHATNN*
Ga0137377_101578323	3300012211	Vadose Zone Soil	IGLVVAFIVFKFGTQLSKAVSDAYKNYQTWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGTPATKHATNN*
Ga0137387_102215491	3300012349	Vadose Zone Soil	GLVVAFIVFKFGTQLSKAVSDAYKNYQTYVPLLAYIFQIIAIVILYSVSSGIATQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHAFDGQSATKHSTNN*
Ga0137386_108123281	3300012351	Vadose Zone Soil	KFGTQLSKAVSDAYKSYQTYVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPPIFLLIALLPTLRVVVNLVHALDNSSGTKHSTNN*
Ga0137371_100576683	3300012356	Vadose Zone Soil	VVLGFPGISQNISGSTISIANIVVFMIGLVVALIVFKFGTQLSKAVSDAYKNYQAWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVINMVHALEGPSASKHSTNN*
Ga0137385_100579093	3300012359	Vadose Zone Soil	WVPLLAYIFQIIAIVILYSVSSGIATQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDNTSGTKHSTNN*
Ga0137360_116780491	3300012361	Vadose Zone Soil	QTYVPLLAYIFQIIAIVILYSVSSGIATQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGASTTKHSTNN*
Ga0137361_114736551	3300012362	Vadose Zone Soil	ISIANIVVFMIGLVVAFVVFKFGTQLSKAVSDAYKNYQTWVPLLAYIFQVIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHAIEGPSATKHSTNN*
Ga0137390_114542691	3300012363	Vadose Zone Soil	FPGISNNITGSTISIANIAVFMIGLVVAFIVFKFGTQLSKAVSDAYKNYQTWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRCVVNLVHALDGTPTAKHATNN*
Ga0134040_11659121	3300012389	Grasslands Soil	VIEAVVLGFPGISQNISGSTISIANIVVFMIGLVVALIVFKFGTQLSKAVSDAYKNYQAWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVINMVHALEGPSASKHSTNN*
Ga0137396_103655652	3300012918	Vadose Zone Soil	FLIGLVVALIVFKFGTQLSKAVSDAYKNYQTYVPLLAYIFQIIAIVILYSVSNGIATQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGSSPAKHTTNN*
Ga0137419_101567361	3300012925	Vadose Zone Soil	QNISGSTISIANVAVFCIGLVVALIVFKFGTQLSRAVSDAYKNYQSWVPLLAYIFQIIAIVILYNVSSGIASPSFASAPWAYPLIFLLIALIPTLRVVVNIVHALEGSPTPKHSQNN*
Ga0137419_117902981	3300012925	Vadose Zone Soil	SIANIAVFMIGLVVALIVFKFGTQLSKAVSDAYKNYQTWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHAIEGPSATKHSTNN*
Ga0137416_100390441	3300012927	Vadose Zone Soil	QTWVPLLAYIFQIIAIVILYSVSSGIATQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGQTATKHTTNN*
Ga0137416_114250712	3300012927	Vadose Zone Soil	FGTQLSKAVSDAYKNYQTWVPLLAYIFQIIAIVILYSVSSSIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGSSTTKHSTNN*
Ga0134077_101644601	3300012972	Grasslands Soil	YKNYQAWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVINMVHALEGPSASKHSTNN*
Ga0137418_101868552	3300015241	Vadose Zone Soil	GFPGIGQNISGSTISIANVAVFCIGLVVALIVFKFGTQLSRAVSDAYKNYQSWVPLLAYIFQIIAIVILYNVSSGIASPSFASAPWAYPLIFLLIALIPTLRVVVNIVHALEGSPTPKHSQNN*
Ga0134083_102430621	3300017659	Grasslands Soil	IEAVVLGFPGISQNISGSTISIANIVVFMIGLVVALIVFKFGTQLAKAVSDAYKNYQAWVPLLAYIFQIIAIVILYSVSNGIAIQYFTSAPWAYPLIFLLIALLPTLRVVINMVHALEGPSASKHSTNN
Ga0066662_110540772	3300018468	Grasslands Soil	GTQLSKAVSDAYKNYQTWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVINMVHALEGPSASKHSTNN
Ga0066662_115681751	3300018468	Grasslands Soil	GFPGITQNISGSTISIANIAVFMIGLVVAFIVFKFGTQLSKAVSDAYKNYETWVPLLAYIFQIIAIVILYSVSNGIATQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDNSSGTKHSTNN
Ga0179585_11840311	3300021307	Vadose Zone Soil	QNITGSTISIASIAVFLIGLVVAFIVFKFGTQLSKAVSDAYKNYQTWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGTPTAKHATNN
Ga0207646_114001621	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MIGLVVAFIVFKFGTQLSKAVSDAYKNYQTWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGSPATKHATNN
Ga0209237_12536011	3300026297	Grasslands Soil	AFIVFKFGTQLSKAVSDAYKNYQTYVPLLAYIFQIIAIVILYSVSSGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDNSSGTKHSTNN
Ga0209236_10016311	3300026298	Grasslands Soil	IVVFMIGLVVALIVFKFGTQLSKAVSDAYKNYQAWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVINMVHALEGPSASKHSTNN
Ga0209236_10166724	3300026298	Grasslands Soil	TQLAKAVSDAYKNYQTYVPLLAYIFQIIAIVILYSVSSGIATQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDNSSGTKHSTNN
Ga0209236_12969291	3300026298	Grasslands Soil	AVSDAYKNYQTWVPLLAYIFQIIAIVILYSVSSGIATQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDNSSGTKHSTNN
Ga0209471_10055598	3300026318	Soil	ISGSSISIANIAVFMIGLVVALIVFKFGTQLAKAVSDAYKNYQTYVPLLAYIFQIIAIVILYNVSSGIATQYFTSAPWAYPLIFLLIALMPTLKVVVNLVHNLEGSSATKHSQNN
Ga0209801_13073301	3300026326	Soil	VIIEAVVLGFPGIGQPISGSTISIANIAVFMIGLVVALIVFKFGTQLSKAVSDAYKNYQAWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVINMVHALEGPSATKHSTNN
Ga0209158_11513141	3300026333	Soil	IANIAVFMIGLVVAFIVFKFGTQLAKAVSDAYKNYQTWVPLLAYIFQIIAIVILYSVSSGIATQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDNSSGTKHSTNN
Ga0209690_12958831	3300026524	Soil	SGSTISIANIAVFMIGLVVALIVFKFGTQLSKAVSDAYKNYQTYVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVINLVHALEGPSASKHSTNN
Ga0209806_12741981	3300026529	Soil	IAVFMIGLVVALIVFKFGTQLAKAVSDAYKNYQTYVPLLAYIFQIIAIVILYNVSSGIATQYFTSAPWAYPLIFLLIALMPTLKVVVNLVHNLEGSSATKHSQNN
Ga0209157_12674391	3300026537	Soil	IVFKYGTQLSKAVSDAYKNYQTWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALEGPSATKHSTNN
Ga0209376_12875381	3300026540	Soil	VSDAYKNYQAWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVINMVHALEGPSASKHSTNN
Ga0209156_102917293	3300026547	Soil	YQAWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVINMVHALEGPSASKHSTNN
Ga0209388_11548601	3300027655	Vadose Zone Soil	QTWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGASTTKHSTNN
Ga0209588_10661782	3300027671	Vadose Zone Soil	IGLVVALIVFKFGTQLSKAVSDAYKSYQTWVPLLAYIFQIIAIVILYSVSSGIATQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGQTATKHTTNN
Ga0209180_105248431	3300027846	Vadose Zone Soil	SDAYKNYQTWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGTPTAKHATNN
Ga0137415_108934891	3300028536	Vadose Zone Soil	GLVVAFIVFKFGTQLSKAVSDAYKNYQTWVPLLAYIFQIIAIVILYSVSSSIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGSSTTKHSTNN
Ga0257175_11038871	3300028673	Soil	GISQNITGSTISIANIVVFMIGLVVAFIVFKFGTQLSKAVSDAYKNYQTWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGASTTKHSTNN

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086670

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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