Metagenome / Metatranscriptome Family F086695

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F086695
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	73 residues
Representative Sequence	AVHRSRDERAWWRQAGIDPIKVARRLWKETRGMGQQQSERPASPRPHAAAASPDPKNEDIDATATPQEEPRLPDVPG
Number of Associated Samples	67
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	97.27 %
% of genes from short scaffolds (< 2000 bps)	87.27 %
Associated GOLD sequencing projects	61
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (98.182 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (30.000 % of family members)
Environment Ontology (ENVO)	Unclassified (57.273 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (67.273 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.81% β-sheet: 0.00% Coil/Unstructured: 76.19%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF00202	Aminotran_3	0.91
PF12708	Pectate_lyase_3	0.91
PF04404	ERF	0.91
PF13489	Methyltransf_23	0.91
PF01370	Epimerase	0.91
PF13524	Glyco_trans_1_2	0.91
PF13365	Trypsin_2	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.18 %
Unclassified	root	N/A	1.82 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.18 %
Unclassified	root	N/A	1.82 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.18 %
Unclassified	root	N/A	1.82 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	95.45 %
Unclassified	root	N/A	1.82 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.91 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	72.73 %
Unclassified	root	N/A	1.82 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.91 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	59.09 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.82 %
Unclassified	root	N/A	1.82 %
Candidatus Melainabacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	53.64 %
Unclassified	root	N/A	1.82 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.91 %
unclassified Candidatus Melainabacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → unclassified Candidatus Melainabacteria	0.91 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	52.73 %
Unclassified	root	N/A	1.82 %
Candidatus Melainabacteria bacterium GWA2_34_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → unclassified Candidatus Melainabacteria → Candidatus Melainabacteria bacterium GWA2_34_9	0.91 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.91 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.91 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_101216315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	582	Open in IMG/M
3300000955\|JGI1027J12803_103163414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	815	Open in IMG/M
3300004633\|Ga0066395_10676794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	611	Open in IMG/M
3300005332\|Ga0066388_100137150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3003	Open in IMG/M
3300005332\|Ga0066388_104429659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	715	Open in IMG/M
3300005332\|Ga0066388_104729433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	693	Open in IMG/M
3300005332\|Ga0066388_106202959	All Organisms → cellular organisms → Bacteria → Proteobacteria	603	Open in IMG/M
3300005332\|Ga0066388_108489316	All Organisms → cellular organisms → Bacteria → Proteobacteria	511	Open in IMG/M
3300005363\|Ga0008090_15458149	All Organisms → cellular organisms → Bacteria → Proteobacteria	508	Open in IMG/M
3300005447\|Ga0066689_10723012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	622	Open in IMG/M
3300005451\|Ga0066681_10569211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	699	Open in IMG/M
3300005764\|Ga0066903_100036756	All Organisms → cellular organisms → Bacteria	5682	Open in IMG/M
3300005764\|Ga0066903_100399920	All Organisms → cellular organisms → Bacteria → Proteobacteria	2259	Open in IMG/M
3300005764\|Ga0066903_100637762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1858	Open in IMG/M
3300005764\|Ga0066903_100641308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1854	Open in IMG/M
3300005764\|Ga0066903_102793100	All Organisms → cellular organisms → Bacteria → Proteobacteria	947	Open in IMG/M
3300005764\|Ga0066903_103280721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	874	Open in IMG/M
3300005764\|Ga0066903_103442420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	853	Open in IMG/M
3300005764\|Ga0066903_104411227	All Organisms → cellular organisms → Bacteria → Proteobacteria	751	Open in IMG/M
3300005764\|Ga0066903_104681131	All Organisms → cellular organisms → Bacteria → Proteobacteria	728	Open in IMG/M
3300005764\|Ga0066903_104877220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	713	Open in IMG/M
3300006904\|Ga0075424_101404277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	742	Open in IMG/M
3300010048\|Ga0126373_12023537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	638	Open in IMG/M
3300010048\|Ga0126373_13253830	All Organisms → cellular organisms → Bacteria → Proteobacteria	506	Open in IMG/M
3300010358\|Ga0126370_11584894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	626	Open in IMG/M
3300010358\|Ga0126370_12213086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	542	Open in IMG/M
3300010360\|Ga0126372_10922346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	878	Open in IMG/M
3300010360\|Ga0126372_12514963	All Organisms → cellular organisms → Bacteria → Proteobacteria	566	Open in IMG/M
3300010360\|Ga0126372_12626551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	555	Open in IMG/M
3300010361\|Ga0126378_11879251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	681	Open in IMG/M
3300010361\|Ga0126378_12677582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	570	Open in IMG/M
3300010361\|Ga0126378_12711259	All Organisms → cellular organisms → Bacteria → Proteobacteria	566	Open in IMG/M
3300010362\|Ga0126377_10499984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1247	Open in IMG/M
3300010366\|Ga0126379_12156849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	659	Open in IMG/M
3300010376\|Ga0126381_103791351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	591	Open in IMG/M
3300010376\|Ga0126381_105046841	All Organisms → cellular organisms → Bacteria → Proteobacteria	506	Open in IMG/M
3300010397\|Ga0134124_12559277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	553	Open in IMG/M
3300010398\|Ga0126383_11059675	All Organisms → cellular organisms → Bacteria → Proteobacteria	900	Open in IMG/M
3300010398\|Ga0126383_12197024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	638	Open in IMG/M
3300010398\|Ga0126383_13085401	All Organisms → cellular organisms → Bacteria → Proteobacteria	544	Open in IMG/M
3300012199\|Ga0137383_10986043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	614	Open in IMG/M
3300012363\|Ga0137390_11467981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	624	Open in IMG/M
3300012951\|Ga0164300_10024913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2124	Open in IMG/M
3300012971\|Ga0126369_10156926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2147	Open in IMG/M
3300016270\|Ga0182036_10037543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2945	Open in IMG/M
3300016270\|Ga0182036_11003991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	688	Open in IMG/M
3300016270\|Ga0182036_11500438	All Organisms → cellular organisms → Bacteria → Proteobacteria	566	Open in IMG/M
3300016270\|Ga0182036_11544442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	558	Open in IMG/M
3300016294\|Ga0182041_10174381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → unclassified Candidatus Melainabacteria → Candidatus Melainabacteria bacterium GWA2_34_9	1686	Open in IMG/M
3300016319\|Ga0182033_10921396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	775	Open in IMG/M
3300016357\|Ga0182032_10144543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1751	Open in IMG/M
3300016357\|Ga0182032_10502942	All Organisms → cellular organisms → Bacteria → Proteobacteria	997	Open in IMG/M
3300016371\|Ga0182034_10291860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1303	Open in IMG/M
3300016371\|Ga0182034_10856447	All Organisms → cellular organisms → Bacteria → Proteobacteria	780	Open in IMG/M
3300016371\|Ga0182034_11487508	All Organisms → cellular organisms → Bacteria → Proteobacteria	593	Open in IMG/M
3300016404\|Ga0182037_10652743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	897	Open in IMG/M
3300016404\|Ga0182037_11688689	All Organisms → cellular organisms → Bacteria → Proteobacteria	564	Open in IMG/M
3300016422\|Ga0182039_10053359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2765	Open in IMG/M
3300018482\|Ga0066669_11717259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	577	Open in IMG/M
3300021560\|Ga0126371_10718182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1147	Open in IMG/M
3300021560\|Ga0126371_13753272	All Organisms → cellular organisms → Bacteria → Proteobacteria	512	Open in IMG/M
3300031543\|Ga0318516_10394120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	798	Open in IMG/M
3300031549\|Ga0318571_10296042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	607	Open in IMG/M
3300031640\|Ga0318555_10150388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1246	Open in IMG/M
3300031668\|Ga0318542_10513852	All Organisms → cellular organisms → Bacteria → Proteobacteria	623	Open in IMG/M
3300031682\|Ga0318560_10393100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	750	Open in IMG/M
3300031682\|Ga0318560_10608567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	592	Open in IMG/M
3300031713\|Ga0318496_10533947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	648	Open in IMG/M
3300031719\|Ga0306917_10541429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	915	Open in IMG/M
3300031719\|Ga0306917_11076851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	626	Open in IMG/M
3300031723\|Ga0318493_10280197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	896	Open in IMG/M
3300031724\|Ga0318500_10015796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2775	Open in IMG/M
3300031724\|Ga0318500_10304679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	781	Open in IMG/M
3300031736\|Ga0318501_10108500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1393	Open in IMG/M
3300031744\|Ga0306918_11293966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	561	Open in IMG/M
3300031748\|Ga0318492_10033548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2320	Open in IMG/M
3300031764\|Ga0318535_10385737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	626	Open in IMG/M
3300031764\|Ga0318535_10442343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	579	Open in IMG/M
3300031770\|Ga0318521_10812948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	570	Open in IMG/M
3300031780\|Ga0318508_1221208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	543	Open in IMG/M
3300031798\|Ga0318523_10643807	All Organisms → cellular organisms → Bacteria → Proteobacteria	521	Open in IMG/M
3300031819\|Ga0318568_10468062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	786	Open in IMG/M
3300031833\|Ga0310917_10413194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	917	Open in IMG/M
3300031879\|Ga0306919_10482588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	955	Open in IMG/M
3300031879\|Ga0306919_11147408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	591	Open in IMG/M
3300031890\|Ga0306925_11681004	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300031897\|Ga0318520_10320668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	936	Open in IMG/M
3300031910\|Ga0306923_10166723	All Organisms → cellular organisms → Bacteria → Proteobacteria	2516	Open in IMG/M
3300031910\|Ga0306923_11701412	All Organisms → cellular organisms → Bacteria → Proteobacteria	652	Open in IMG/M
3300031941\|Ga0310912_11068623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	617	Open in IMG/M
3300031945\|Ga0310913_10444753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	920	Open in IMG/M
3300031954\|Ga0306926_10475228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1538	Open in IMG/M
3300031954\|Ga0306926_10682514	All Organisms → cellular organisms → Bacteria → Proteobacteria	1247	Open in IMG/M
3300032010\|Ga0318569_10504371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	564	Open in IMG/M
3300032043\|Ga0318556_10170376	All Organisms → cellular organisms → Bacteria → Proteobacteria	1128	Open in IMG/M
3300032044\|Ga0318558_10309693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	781	Open in IMG/M
3300032055\|Ga0318575_10063209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1729	Open in IMG/M
3300032055\|Ga0318575_10641698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	538	Open in IMG/M
3300032059\|Ga0318533_10056608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2621	Open in IMG/M
3300032059\|Ga0318533_10654875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	771	Open in IMG/M
3300032063\|Ga0318504_10588002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	534	Open in IMG/M
3300032067\|Ga0318524_10434619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	686	Open in IMG/M
3300032076\|Ga0306924_11106108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	863	Open in IMG/M
3300032076\|Ga0306924_11154110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	841	Open in IMG/M
3300032094\|Ga0318540_10420063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	646	Open in IMG/M
3300032261\|Ga0306920_100185345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3105	Open in IMG/M
3300032261\|Ga0306920_100624264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1593	Open in IMG/M
3300033290\|Ga0318519_10398115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	820	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.09%
Host-Associated	Host-Associated	0.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.09%
Plants	Host-Associated → Plants	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.09%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.55%
Loam	Environmental → Terrestrial → Soil → Loam	14.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	57.27%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.55%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.55%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	30.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	18.18%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	14.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.64%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.91%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.91%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.91%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.91%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1012163152	3300000955	Soil	RAVHRSRNERAWWSQAGIDPIKVARRLWKATRGLGPRRSKRAALPQPHAAAASLDPSPKNEEISASATPQEKTRLPDVPG*
JGI1027J12803_1031634142	3300000955	Soil	AHRSRDEHAWWRQAGIDPIKVARRLWKATHGRAQRRSQGRALPQPHGAATSSDPTAIKGGDISATATTQEKTRLPDLTG*
Ga0066395_106767941	3300004633	Tropical Forest Soil	AVHRSRDERAWWRQAGIDPIKVARRLWRETRGMGQQQSERTASLRPHAAAPSPNPKNEDIDATATPQEEPRLPDVAG*
Ga0066388_1001371506	3300005332	Tropical Forest Soil	QAGIDPIKVARRLWKETRGLGQRRSRRPVSPRPHDAGASSHPILKNEDITATAETQEETRLPDVPG*
Ga0066388_1044296592	3300005332	Tropical Forest Soil	HRSRDERAWWRQAGLDPIKVARRLWKATRGIGQQRSQRAALPRPHAAAASSDPTPKNEETSATAVTQEETRLPDLLG*
Ga0066388_1047294332	3300005332	Tropical Forest Soil	HRSRDERAWWRQAGIDPIKVASRLWKATHGMGQRGSRRLASAPPHEAVATSDPCRKGEGVSAGATTQEKAGLPDLRG*
Ga0066388_1062029591	3300005332	Tropical Forest Soil	RDERGWWRQADIDPIKVARRLWKETHGMGPRRSRQEISPRPQGAAASSDPRSEDISATATTQEESRLPDLSGEDEKRLDARGIDNDDVET*
Ga0066388_1084893161	3300005332	Tropical Forest Soil	RDERAWWRQTGVDPIQVARKLWKETRGIGQRRSHRAALPRPHDAATSPNPKNEEVSVTATPQEEAPLPDLPGNEGPERLDARGS*
Ga0008090_154581491	3300005363	Tropical Rainforest Soil	HRAVHRSRDERGWWRQAGIDPIKVARRLWKATRGLGQRRSQRPPLPRPHGAAASSDTNNEEISVTATPQEETRLPDLAG*
Ga0066689_107230122	3300005447	Soil	GIDPIKVARRLWKETRGMRPRRSQQAVLPPPHGAAASSDPKNEDITATATTHEETRLPDLPG*
Ga0066681_105692112	3300005451	Soil	DEGAWWRQAGIDPIQVARRLWKATHGRGQRRSQPQPHGAATSSDPTPIKGGDIGATARTQDETRLPDLPE*
Ga0066903_1000367561	3300005764	Tropical Forest Soil	WRQAGIDPIKVARRLWNETHEMGQRRSQRTALPRPHGAGPYADSKNEEISTATTPQEETRLPDLPG*
Ga0066903_1003999201	3300005764	Tropical Forest Soil	ERVWWTEAGIDPIKVARRLWKATRGLDRRSQRAALPRPHGATAPSDPIAKNEDISATATTQEESRLSYLPG*
Ga0066903_1006377624	3300005764	Tropical Forest Soil	DERAWWRQAGIDPIKVARRLWRKTRGMGQQQCERTASPRPHAAADPKNEDIDATATPKEEPRLPDVLG*
Ga0066903_1006413081	3300005764	Tropical Forest Soil	RLWKETHGMGRRLSGRAPLPRPHDAAAPSDPIPKNEDIGATATTQEEARLPDLPG*
Ga0066903_1027931002	3300005764	Tropical Forest Soil	GIDPIKVARRLWRQTRGMGQQQSERTASPRPHAAAPSPDPKNEEIDATATPQEEPRLPDVAG*
Ga0066903_1032807211	3300005764	Tropical Forest Soil	WWRQAGIDPIKIARRLWRDTRGLGQWRSPRAPLPRRHGAAASTDATPKTEEIDATATPQEELRLPDVPG*
Ga0066903_1034424201	3300005764	Tropical Forest Soil	DPIKVARRLWRETRGMGQQQSERPASPRPHAAAPSPDPKNEEIDATATPQEEPRLPDVPG
Ga0066903_1044112272	3300005764	Tropical Forest Soil	WWRQAGIDPIKVARRLWKETHGIGRRRPQRPALRRPHGVASSSDPKNEDMSAAVTLQEEARLSDLPD*
Ga0066903_1046811312	3300005764	Tropical Forest Soil	AGIDPIKVARRLWKETRGMGQRPSQRPALPRQHDAAASSDPKNEDSSATATPQEEARLLDLRG*
Ga0066903_1048772202	3300005764	Tropical Forest Soil	PIKVARKLWKETRGIGQHRSQRATLPRPRVAAESSDPTPKHEETRATTATQEETRLPDLPG*
Ga0075424_1014042772	3300006904	Populus Rhizosphere	RAAHRSRDERAWWKQVGIDPIKIARRLWKATHGRGERQSQRSPLPRPHGAAPSSDPTPKSGDISATATTQEETRLPDLPD*
Ga0126373_120235371	3300010048	Tropical Forest Soil	DERTWWRQAGIDPIKVARRLWKETRGLGQRRSQRPVSPRPHDAGASSDPILKNEDITATAETQEETRLPDVPGQQGEKRLDGGS*
Ga0126373_132538302	3300010048	Tropical Forest Soil	RSRDERAWWRQAGIDPIKVARRLWKETRGMGRRVSQRAVLPRPHGAAASSDTNNEEISAAATPQEETPLPDLPG*
Ga0126370_115848941	3300010358	Tropical Forest Soil	RQAGIDPIKVARRLWKETRGLGQQQSERTASPRPRAAAASPDAKNEDIGAAATPQQEAPFPDLPG*
Ga0126370_122130862	3300010358	Tropical Forest Soil	GDERAWWQQAGIDPIKVARRLWKATRGMGQRRSPRVALPRPHAAAATSDPIPKNEEISAPATTQEGTRLPDLPG*
Ga0126372_109223461	3300010360	Tropical Forest Soil	RSRDERAWWRQAGIDPIKVARRLWKESRGVDERRSPRPALPRPHAAAALSDLTPENEEISATATTQEDARSPNLPG*
Ga0126372_125149631	3300010360	Tropical Forest Soil	RAVHRSRDERAWWRQAGIDSIKVARRLWKATRGMGRQPSQRPPSPRPRAAAASPDAKNEDIDATATPQEETRLPDLPG*
Ga0126372_126265512	3300010360	Tropical Forest Soil	RAVHRSRDEGAWWRQVGMDPLKVARRLWKETRGMGRRPSQRAVLPRPHGAAASSDTNNEEISAAATPQEETPLPDLPG*
Ga0126378_118792511	3300010361	Tropical Forest Soil	DPIKVARRLWKETRGLGQRRSRRPVSTRPNDADASSDPILKNEDITATAETQEETRLPDVPG*
Ga0126378_126775822	3300010361	Tropical Forest Soil	VHRFHDERVWWRQAGIDPIKVASRLWKETRGIGQRRSHRAALPRPHDAATSPNPKNEETSATAVTQEETRLPDLPR*
Ga0126378_127112591	3300010361	Tropical Forest Soil	VHRSREERTWWRQAGIDPIKAARRLWKETHGMGQRRSQRPALPRPHAAAASSDPKNEETSATATAQEETRLPDLPG*
Ga0126377_104999844	3300010362	Tropical Forest Soil	RSRDERAWWRQAGIDPIKVARRLWRVTRGMGQQRSERTASPRPHAAAPSPDPKNEDIDATATPQEEPRLPDVPG*
Ga0126379_121568491	3300010366	Tropical Forest Soil	RTWWRQAGIDPIKVARRLWKATRGMGRRPSQRPPSPRPRAAAASADAKNEDIDATATPQEETRLPDLSG*
Ga0126381_1037913512	3300010376	Tropical Forest Soil	RAAHRSRDERTWWRQAGIDPIKVARRLWKVTHGLGRRQCQRAALPQPHGAAASSGPTLKSGDISATAATQEETRLPDLPD*
Ga0126381_1050468412	3300010376	Tropical Forest Soil	RSRDERAWWRQAGIDPIKVARGLWKETRGMGQRRSPQAALPRPHAAAAPSNAKNEEMDTTAATQQETRLPDLPG*
Ga0134124_125592772	3300010397	Terrestrial Soil	AWWRQVGMDPLKVARRLWKQTRGMGQQRPERPVSPRPHATAASPDPKNKEIEATATPQEERR*
Ga0126383_110596751	3300010398	Tropical Forest Soil	ERAWWRQAGIDPIKVARRLWRVTRGMGQQRSERTASPRPHAAAPSPDPKNKDIDAAATPQEEPRLPDLPG*
Ga0126383_121970241	3300010398	Tropical Forest Soil	RSRDERAWWRQAGIDPIKVARSLWKATRGLGQRRSQRPPLPRPHGAAASSDTNNEEINAIATPQKETHLPDLPG*
Ga0126383_130854011	3300010398	Tropical Forest Soil	ERAWWRQAGIDPIKVARRLWRQTRGMGQQQSERTASPRPHAAAPSPDPKNEEIDATATPQEEPRLPDVAG*
Ga0137383_109860432	3300012199	Vadose Zone Soil	RAVHRSGDERAWWQQAGIDPIKVARRLWKATRGMGQRRSPRVALPRPHAAAATSDPIPKNEEISAPATTQEGTRLPDLPG*
Ga0137390_114679812	3300012363	Vadose Zone Soil	QAGIDPIKVARRLWKATRGIGQRRSQRAALPRLHAAAAPSDPKNEEMGATATTQQKTRLPDLPG*
Ga0164300_100249131	3300012951	Soil	AVHRSRDERAWWKQSGIDPIKIARRLWKETRGMGKGRAEPPVSPRPHGAAASPDPRNEDMRTAARTQEETRLTDAAASLPRALDRQ*
Ga0126369_101569265	3300012971	Tropical Forest Soil	QAGIDPIKVARRLWKETHGIAQRRSQRLAIHRPHDAAAPTEPIQSNDDESAIAATQEESRLPDLPG*
Ga0182036_100375435	3300016270	Soil	HRAVHRSRDERAWWSQARIDPIKVARRLWKATRGMGQRPPGRAALPRPHGAAASSDPKKENVSTTATPQDETRSLDLPGWQGQRGWTLEEHDDVETQRTR
Ga0182036_110039911	3300016270	Soil	IDPIKVARRLWRVTRGMGQHQSERTASPRPHAAAASPDRKNEDINTTATPPEEPRLLDVP
Ga0182036_115004381	3300016270	Soil	DERAWWRQAGIDPIKVARRLWRETRGMGQQQPERTASPRPHAAPDPKNEEIDATATPQEEPRLPDVAG
Ga0182036_115444421	3300016270	Soil	RAWWRQAGIDPIKVARRLWRKTRGMGQQQCERTASPRPQVAADLKNEDIDATATPKEEPRLPDVPGWKDRRGWMLEDHQ
Ga0182041_101743811	3300016294	Soil	AVHRSRDERAWWRQAGIDPIKIARRLWKETREMGRRPSQRPLLPRPHGAAASSDPNNEEISATATTQEGTRLPDLPV
Ga0182033_109213962	3300016319	Soil	IDPIKVARRLWRKTRGMGQQQCERTASPRPQVAADLKNEDIDATATPKEEPRLPDVPGWKDRRGWMLEDHQ
Ga0182032_101445431	3300016357	Soil	RSRDERAWWRQAGIDPIKVARRLWKETRGIGQQQSERTPSPRPRAAAASPDAKNEDISATATTQEETRLADLPG
Ga0182032_105029422	3300016357	Soil	WRQAGIDPIKVARRLWKETRGMGQRRSRRAALPRPRDAGASSDPILKNEDITATAETQEETRLPDAPG
Ga0182034_102918601	3300016371	Soil	DPIKVARRLWRETRGMGQRRSERTASPRLHAAAASPDPKNEEIDATATPQEEPRLPDVPGQQDRRGWMLQDHQ
Ga0182034_108564471	3300016371	Soil	AAHGSHDERAWWRQAGIDPIKVARRLWKETHGIGRRRPQRPTLRRPHGVATSSDPKNEDISATATPQEETRLSDLPD
Ga0182034_114875081	3300016371	Soil	DERAWWRQAGIDPIKVARRLWKETRGMGQQQSERTASPRPHAAPDPKNEEIDATATPQEEPRLPDVAG
Ga0182034_119287351	3300016371	Soil	PIKIARRLWRDTRGMGQRRSQRAASSCSDVVAPSSDPRPENKEISAAAMTQEETPLPDLP
Ga0182037_106527431	3300016404	Soil	RSRDERAWWRQAGIDPIKVARRLWKETRGLGPRRSRRPASPRPHDAGASSDPILKNEGTTATAETQEETHLPDVPG
Ga0182037_116886892	3300016404	Soil	AVHRSRDERAWWRQAGIDPIKVARRLWKATRGTARRPSQQPALLRPHGTAASSDPKNEEISTTATPQHETRFPDLPG
Ga0182039_100533591	3300016422	Soil	QAGIHPIKVARRLWKATRGIGQRRSQRAPLPLPRAAAASSDPTPKNEEISATATPQEETRLPDLPG
Ga0066669_117172592	3300018482	Grasslands Soil	KQAGIDPIKVAGKLWKSTRGLGLRRSTRMTLPQPHAAAASSDATPKNEEISASATPQEKTRLPDLLD
Ga0126371_107181822	3300021560	Tropical Forest Soil	QAGLDPIKVARRLWKATHGIGQQQSERTPSPRPRTAAASPDAKNEDIDATATPQEEARLPDLPG
Ga0126371_137532722	3300021560	Tropical Forest Soil	WRQAGIDPIKVARRLWKETRGMGQQQSERTVSPRPRGAAASPDPKNEQIDASAPPQEEPHLPDVSG
Ga0318516_103941201	3300031543	Soil	VHRSRDERAWWRQAGIDPIKVARRLWKETRGLGQRRSRRPVSPRPHDAGASSNPILKNEGLTATAETQEETRLPDAPG
Ga0318571_102960422	3300031549	Soil	SRDERDWWRQAGIDPIKVARKLWKATRGMGQRPSTRAALPRPHGAAASTDPKNEDMGATPQKEVRLPDVPG
Ga0318555_101503883	3300031640	Soil	RGHHRAVHHSRDERAWWRQAGIDPIKVARRLWRETRGMGQRRSERTASPRLHAAAAYPDPKNEEIDATATTQEETRLPDLPA
Ga0318542_105138521	3300031668	Soil	VHRSRDERAWWRQAGIDPIKVARRLWKETRGLGPRRSRRPASPRPHDAGASSDPILKNEGTTATAETQEETHLPDVPG
Ga0318560_103931001	3300031682	Soil	IKVARRLWKATHGLGQRQSQQLPLPQPHGAAASSDPTLKSEGISATATTQEETRLPDLPD
Ga0318560_106085671	3300031682	Soil	RSRDERDWWRQAGIDPIKVARKLWKATRGMGQRPSTRAALPRPHGAAASTDPKNEDIGATPQKEVHLPDVPG
Ga0318496_105339472	3300031713	Soil	VHRSRDERAWWRQAGIDPIKVARRLWRETRGMGQRRSERTASPRLHAAAAYPDPKNEEIDATATTQEETRLPDLPA
Ga0306917_105414292	3300031719	Soil	HRAVHRSRDERAWWRQAGIHPIKVARRLWKATRGIGQRRSQRAPLPLPRAAAASSDPTPKNEEISATATPQEETRLPDLPG
Ga0306917_110768512	3300031719	Soil	RAVHRSRDERAWWWQAGIDPIKIARRLWKATHQLGQRGSQRLALPWPHGAAASSDPTPKSADINATATPQAEAPLPDLPGQQGKRA
Ga0318493_102801971	3300031723	Soil	KVARRLWKETRGMGQQQSERTASPRPHAAPDPKNEEIDATATAQEEPRLPDVPG
Ga0318500_100157966	3300031724	Soil	WRQAGIDPIRVARRLWRETRGMGQQQSERTASPRPHAAAASPDPKNEDIDATATPPEESRLSDVPG
Ga0318500_103046791	3300031724	Soil	RDERAWWRQAGIDPIKVARRLWKETRGLGRRLSPRAASPRPHASAASPDPKNEDIDASATPQEEPRLPDVPG
Ga0318501_101085003	3300031736	Soil	KLLAHLAAERAWWRQAGIDPIRVARRLWRETRGMGQQQSERTASPRPHAAAASPDPKNEDIDATATPPEESRLSDVPG
Ga0306918_112939662	3300031744	Soil	SRDERAWWRQAGIDPIKVARRLWKATRGMGQRRCPRAAPRPHAAAATSDPTPKNEEISAPATTQEGTPVET
Ga0318492_100335481	3300031748	Soil	REAGIDPIKVARRLWRETRGMGQRRSERTASPRLHAAAASPDPKNEEIDATATPQEEPRLPDVPGQQDRRGWMLQDHQ
Ga0318535_103857371	3300031764	Soil	HRSRDERAWWRQAGIDPIKVARRLWKETRGMGQRRSRRAALPRPRDAGASSDPILKNEDITATAETQEETRLPDAPG
Ga0318535_104423431	3300031764	Soil	AGIDPIKVARRLWKETRGLGQRRSRQPALPRPHDAGASSNPILKNEDITATAETQEETRLPDVPG
Ga0318521_108129481	3300031770	Soil	DERAWWRQAGIDPIKVARRLWKETHGMGLRRSQRPESPRPRGAAASSDPTPNNEENDAIATAQEEPRLPDVPG
Ga0318508_12212081	3300031780	Soil	AWWRQVGIDPIKVARRLWKATHGMGQQQSERTASPRPHAAAASPDPKNEDIDATATPPEESRLSDVPG
Ga0318523_106438071	3300031798	Soil	HRAVHRSRDERAWWRQTGIDPIKVARRLWRVTRGMGQHQSERTASPRPHAAAASPDRKNEDINTTATPPEEPRLLDVPG
Ga0318568_104680622	3300031819	Soil	RDGRAWWREAGIDPIKVARRLWKATHGLGQRQSQQLPLPQPHGAAASSDPTLKSEGISATATTQEETRLPDLPD
Ga0310917_104131942	3300031833	Soil	HRAVHRSRDERAWWRQAGIDPIKVARRLWKETRGLGPRRSRRPASPRPHDAGASSDPILKNEGTTATAETQEETHLPDVPG
Ga0306919_104825881	3300031879	Soil	AVHRSRDERAWWSQARIDPIKVARRLWKATRGMGQRPPGRAALPRPHGAAASSDPKKENVSTTATPQDETRSLDLPGWQGQRGWTLEEHDDVETQRTR
Ga0306919_111474081	3300031879	Soil	AVHRSRDERAWWRQAGIDPIKVARRLWKETRGLGQRRSPRAAFPRLHGAAASTDATPKNEEIDAIATPQEEPRLPDVPG
Ga0306925_116810041	3300031890	Soil	AGIDPIKVARRLWKETHGMGLRRSQRPESPRPRGAAASSDPTSNNEEIDTIATAQEESRLPDVPG
Ga0318520_103206683	3300031897	Soil	AGIDPIKVARRLWKATRGIGQQRPHRPALPRARAAAATSDPTPKNEEISATATTQEETRLPDLPG
Ga0306923_101667231	3300031910	Soil	HRSHDERAWWRHAGIDPIKVARRLWKETHGLGRRRPQRPALRRPHGVATSSDPKNEDMSATATPQEEPRLSDLPE
Ga0306923_117014121	3300031910	Soil	QADIDPIKVARRLWRETRGMGQQQSERAASPRPHAAAASPDPKNKDIDATATPQEEPRLPDVPG
Ga0306921_124487631	3300031912	Soil	SRDERAWWRQVGIDPIKVARRLWKATRGIGQRRSQRMVSPPLDVVAPSSDPRPENEDISAAATPQEGTPLPDLPG
Ga0310912_110686231	3300031941	Soil	RAWWRQAGIDPIKVARRLWKATHGLGQRQSQQLPLPQPHGAAASSDPTLKSEGISATATTQEETRLPDLPD
Ga0310913_104447532	3300031945	Soil	GHHRAVHRSRDERAWWRQAGIDPIKVARRLWKETRGLGQRRSPRAAFPRLHGAAASTDATPKNEEIDAIATPQEEPRLPDVPG
Ga0306926_104752283	3300031954	Soil	DERAWWRQAGIDPIKVARRLWKETRGLGQRRSPRAAFPRLHGAAASTDATPKNEEIDAIATPQEEPRLPDVPG
Ga0306926_106825142	3300031954	Soil	GIDPIKVARRLWKATHGLGQRRSQRPLLPQPQGAAASSDPTLKSAGIGATATTQEETRLPDLPD
Ga0318569_105043712	3300032010	Soil	AVHRSRDERAWWRQAGIDPIKVARRLWKETRGMGQQQSERPASPRPHAAAASPDPKNEDIDATATPQEEPRLPDVPG
Ga0318556_101703763	3300032043	Soil	AVHRSRDERAWWRQAGIDPIKVARRLWKETHGIGRRRPQRPTLRRPHGVATSSDPKNEDISATATPQEETRLSDLPD
Ga0318558_103096932	3300032044	Soil	SHDERAWWRQAGIDPIKVARRLWKETRGLGQRRSRQPALPRPHDAGASSNPILKNEDITATAETQEETRLPDVPG
Ga0318575_100632091	3300032055	Soil	EAGIDPIKVARRLWKATHGLGQRQSQQLPLPQPHGAAASSDPTLKSEGISATATTQEETRLPDLPD
Ga0318575_106416982	3300032055	Soil	RAVHRSRDERDWWRQAGIDPIKVARKLWKATRGMGQRPSTRAALPRPHGAAASTDPKNEDIGATATPQEETRFVDVPGYQARSGWMFGDRQ
Ga0318533_100566085	3300032059	Soil	IKVARGLWKATHGMGGRLSGRAPVPRPHGAAASSAAKNEKIDVTATPQEEPRLPDVPG
Ga0318533_106548751	3300032059	Soil	RDERAWWRQAGIDPIKVARRLWKATRGLGQRRSQRPALTRPHGAAPSSDPKSEDISAAATPQEETRLADLPG
Ga0318504_105880022	3300032063	Soil	RAWWREAGIDPIKVARRLWKATHGLGQRQSQQLPLPQPHGAAASSDPTLKSEGISATATTQEETRLPDLPD
Ga0318524_104346191	3300032067	Soil	RDERAWWRQASIDPINVARGLWRETRGMEQQQSEQTALPRPHAAAASPDPKNEEIDATATAQEEPRLPDVPG
Ga0306924_111061082	3300032076	Soil	SRDERAWWRQAGIDPIKVARRLWKETRGLGQRRSPRAAFPRLHGAAASTDATPKNEEIDAIATPQEEPRLPDVPG
Ga0306924_111541102	3300032076	Soil	HHRAVHRSRDERAWWRQAGVDPIKVARRLWKATRGLGQRRSQRAALPQPRAAAATPDPTPQNEETSATAARQEETRLPDLPG
Ga0318540_104200632	3300032094	Soil	IDPIKVARRLWKETRGLGQRRSRQPALPRAHDAGASSNLILKNEDITGTAETQEETRLPDVPG
Ga0306920_1001853452	3300032261	Soil	VHRSRDERAWWRQTGIDPIKVARRLWRVTRGMGQHQSERTASPRPHAAAASPDRKNEDINTTATPPEEPRLLDVPG
Ga0306920_1006242641	3300032261	Soil	IDPIKVARRLWKETRGMGQRRSRRAALPRPRDAAASSDPSPKNEEISATATPQEETRLPDLPG
Ga0318519_103981152	3300033290	Soil	RSPDERAWWRQMGIDPIKVARRFWKQTHGMGQRRPRRVASVPRPHGADPNNEDVSATTTTQEETRPPDLPG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086695

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences