Metagenome Family F086731

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086731
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	114 residues
Representative Sequence	LTLTDNSAGELFEGQLLVNFQVVGIGSSGAIRAEVGPSLHLWKSDDETRSRGGAVAAAAYEWPVARRFSGAIRLEGILSKSWFDPGDLPSELERRVTWRYGVGLGLRYRL
Number of Associated Samples	87
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	26.61 %
% of genes near scaffold ends (potentially truncated)	63.64 %
% of genes from short scaffolds (< 2000 bps)	82.73 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.091 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (49.091 % of family members)
Environment Ontology (ENVO)	Unclassified (42.727 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (56.364 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 55.80% Coil/Unstructured: 44.20%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF15902	Sortilin-Vps10	3.64
PF00213	OSCP	2.73
PF00119	ATP-synt_A	1.82
PF05163	DinB	0.91
PF01370	Epimerase	0.91
PF13485	Peptidase_MA_2	0.91
PF01565	FAD_binding_4	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0712	FoF1-type ATP synthase, delta subunit	Energy production and conversion [C]	2.73
COG0356	FoF1-type ATP synthase, membrane subunit a	Energy production and conversion [C]	1.82
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.09 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.09 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.09 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	93.64 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.91 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	92.73 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.91 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.91 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	67.27 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.91 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.91 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.91 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	67.27 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.91 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.91 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.91 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	67.27 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.91 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.91 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.91 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	67.27 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	0.91 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.91 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.91 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	67.27 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.91 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.91 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.91 %
Unclassified	root	N/A	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10637189	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	507	Open in IMG/M
3300002558\|JGI25385J37094_10056889	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1291	Open in IMG/M
3300002560\|JGI25383J37093_10092344	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	898	Open in IMG/M
3300002562\|JGI25382J37095_10107265	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	975	Open in IMG/M
3300005177\|Ga0066690_10562880	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	762	Open in IMG/M
3300005177\|Ga0066690_10923501	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	555	Open in IMG/M
3300005179\|Ga0066684_10337773	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1006	Open in IMG/M
3300005186\|Ga0066676_11094187	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	526	Open in IMG/M
3300005445\|Ga0070708_100980744	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	793	Open in IMG/M
3300005446\|Ga0066686_10009786	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	4908	Open in IMG/M
3300005446\|Ga0066686_10970424	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	554	Open in IMG/M
3300005450\|Ga0066682_10707032	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	618	Open in IMG/M
3300005451\|Ga0066681_10497365	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	751	Open in IMG/M
3300005536\|Ga0070697_100986786	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	748	Open in IMG/M
3300005553\|Ga0066695_10137505	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1516	Open in IMG/M
3300005555\|Ga0066692_10616303	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	680	Open in IMG/M
3300005557\|Ga0066704_10694365	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	642	Open in IMG/M
3300005569\|Ga0066705_10225430	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1182	Open in IMG/M
3300006854\|Ga0075425_102244375	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	607	Open in IMG/M
3300006871\|Ga0075434_100020065	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	6475	Open in IMG/M
3300006871\|Ga0075434_100070853	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3477	Open in IMG/M
3300006903\|Ga0075426_10010363	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	6632	Open in IMG/M
3300007255\|Ga0099791_10005961	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	5011	Open in IMG/M
3300007255\|Ga0099791_10644018	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	520	Open in IMG/M
3300007258\|Ga0099793_10221440	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	910	Open in IMG/M
3300007265\|Ga0099794_10073088	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1682	Open in IMG/M
3300007788\|Ga0099795_10354324	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	657	Open in IMG/M
3300009038\|Ga0099829_10173854	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1731	Open in IMG/M
3300009038\|Ga0099829_10928532	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	722	Open in IMG/M
3300009137\|Ga0066709_100334572	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2073	Open in IMG/M
3300009137\|Ga0066709_101547986	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	953	Open in IMG/M
3300009137\|Ga0066709_102881703	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	635	Open in IMG/M
3300009137\|Ga0066709_103722033	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	553	Open in IMG/M
3300010159\|Ga0099796_10118213	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1016	Open in IMG/M
3300010301\|Ga0134070_10072247	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1179	Open in IMG/M
3300010323\|Ga0134086_10063702	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1265	Open in IMG/M
3300010323\|Ga0134086_10205143	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	738	Open in IMG/M
3300010325\|Ga0134064_10278566	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	629	Open in IMG/M
3300010329\|Ga0134111_10026375	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1998	Open in IMG/M
3300010329\|Ga0134111_10527151	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	521	Open in IMG/M
3300010333\|Ga0134080_10069087	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1414	Open in IMG/M
3300010335\|Ga0134063_10144843	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1099	Open in IMG/M
3300012096\|Ga0137389_10008775	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	6639	Open in IMG/M
3300012198\|Ga0137364_11028055	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	622	Open in IMG/M
3300012199\|Ga0137383_11098649	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	576	Open in IMG/M
3300012200\|Ga0137382_10001146	All Organisms → cellular organisms → Bacteria	11509	Open in IMG/M
3300012200\|Ga0137382_10569576	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	808	Open in IMG/M
3300012200\|Ga0137382_10920834	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	629	Open in IMG/M
3300012201\|Ga0137365_10504729	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	889	Open in IMG/M
3300012203\|Ga0137399_10797537	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	795	Open in IMG/M
3300012204\|Ga0137374_10368632	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1152	Open in IMG/M
3300012205\|Ga0137362_11173279	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	652	Open in IMG/M
3300012206\|Ga0137380_10014040	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	7302	Open in IMG/M
3300012206\|Ga0137380_10193466	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1846	Open in IMG/M
3300012206\|Ga0137380_10445030	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1146	Open in IMG/M
3300012208\|Ga0137376_10018053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5326	Open in IMG/M
3300012350\|Ga0137372_10878871	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	638	Open in IMG/M
3300012351\|Ga0137386_10702978	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	726	Open in IMG/M
3300012351\|Ga0137386_10704387	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	726	Open in IMG/M
3300012351\|Ga0137386_11123487	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	554	Open in IMG/M
3300012353\|Ga0137367_10041292	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3511	Open in IMG/M
3300012356\|Ga0137371_10381738	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1093	Open in IMG/M
3300012358\|Ga0137368_10180047	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1526	Open in IMG/M
3300012360\|Ga0137375_10085380	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3275	Open in IMG/M
3300012360\|Ga0137375_10187237	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1976	Open in IMG/M
3300012361\|Ga0137360_10932426	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	749	Open in IMG/M
3300012532\|Ga0137373_10652388	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	789	Open in IMG/M
3300012582\|Ga0137358_10113962	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1835	Open in IMG/M
3300012683\|Ga0137398_10767406	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	673	Open in IMG/M
3300012685\|Ga0137397_10694132	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	756	Open in IMG/M
3300012917\|Ga0137395_10447717	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	927	Open in IMG/M
3300012918\|Ga0137396_10613092	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	805	Open in IMG/M
3300012925\|Ga0137419_10943661	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	712	Open in IMG/M
3300012930\|Ga0137407_10783853	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	900	Open in IMG/M
3300012930\|Ga0137407_11186647	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	724	Open in IMG/M
3300012944\|Ga0137410_10016857	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	4990	Open in IMG/M
3300012944\|Ga0137410_10249640	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1390	Open in IMG/M
3300012944\|Ga0137410_10360963	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1163	Open in IMG/M
3300012944\|Ga0137410_10605604	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	906	Open in IMG/M
3300012976\|Ga0134076_10124672	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1039	Open in IMG/M
3300014154\|Ga0134075_10030349	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2193	Open in IMG/M
3300014157\|Ga0134078_10012640	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2514	Open in IMG/M
3300015242\|Ga0137412_10641806	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	798	Open in IMG/M
3300015245\|Ga0137409_10424531	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1147	Open in IMG/M
3300015245\|Ga0137409_10698992	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	848	Open in IMG/M
3300015358\|Ga0134089_10559232	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	508	Open in IMG/M
3300017657\|Ga0134074_1222412	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	674	Open in IMG/M
3300017659\|Ga0134083_10488704	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	549	Open in IMG/M
3300018431\|Ga0066655_10099135	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1629	Open in IMG/M
3300018431\|Ga0066655_10333765	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	993	Open in IMG/M
3300019882\|Ga0193713_1133848	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	675	Open in IMG/M
3300020170\|Ga0179594_10116228	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	972	Open in IMG/M
3300021073\|Ga0210378_10045007	All Organisms → cellular organisms → Bacteria	1743	Open in IMG/M
3300022694\|Ga0222623_10379648	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	538	Open in IMG/M
3300025922\|Ga0207646_10960704	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	756	Open in IMG/M
3300026285\|Ga0209438_1115348	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	772	Open in IMG/M
3300026297\|Ga0209237_1133106	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1014	Open in IMG/M
3300026316\|Ga0209155_1030306	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2196	Open in IMG/M
3300026320\|Ga0209131_1078843	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1781	Open in IMG/M
3300026332\|Ga0209803_1269948	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	584	Open in IMG/M
3300026538\|Ga0209056_10029838	All Organisms → cellular organisms → Bacteria	5162	Open in IMG/M
3300026548\|Ga0209161_10220997	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1023	Open in IMG/M
3300027643\|Ga0209076_1102759	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	810	Open in IMG/M
3300027655\|Ga0209388_1051064	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1194	Open in IMG/M
3300027903\|Ga0209488_10003325	All Organisms → cellular organisms → Bacteria	12939	Open in IMG/M
3300027909\|Ga0209382_10415205	All Organisms → cellular organisms → Bacteria	1496	Open in IMG/M
3300028536\|Ga0137415_11093401	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	610	Open in IMG/M
3300028719\|Ga0307301_10184381	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	676	Open in IMG/M
3300028784\|Ga0307282_10572547	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	548	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.45%
Host-Associated	Host-Associated	4.55%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.64%
Plants	Host-Associated → Plants	4.55%
Aquatic	Environmental → Aquatic	1.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.55%
Freshwater	Environmental → Aquatic → Freshwater	0.91%
Sediment	Environmental → Aquatic → Sediment	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	89.09%
Loam	Environmental → Terrestrial → Soil → Loam	4.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.55%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	64.55%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	24.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.73%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.91%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.91%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	49.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	12.73%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	10.91%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.73%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.91%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_106371891	3300001661	Forest Soil	ATTVGLRLNHGMGRTRVDILAAYGKAGLTATGSGLTLTDKTAGELFEGEILLNFQVVGIGSSGAIRAELGPSLHLWKSGDQNRTRAGGVGAFAYEWPIARRVAGAIRLEGMLSKSWFDAGDLPPEYERQVTWRYGVGLGLRYRL*
JGI25385J37094_100568891	3300002558	Grasslands Soil	QVSYATVGLTAAAPDLTLTDNSSGEVLEGQLLLNFQVVGIGSSGAIRAELGPSLHLWKSDDETRSRAGVVVATAYEWPIASRFSGAIRLEGMLSKSWFEPGDLPSELERRVTWRYGIGLGLRYRL*
JGI25383J37093_100923442	3300002560	Grasslands Soil	FGFQASYAGVGLTAAGPGLILTDNSTGQLIEGQLLLNFRVVGIGSSGAIRAEVGPSLHLWKSGDENRTRLGGVTALAYEWPVTKRFSGAIRLEGIVSKSWFDAGDLPPEYERQVTWLYGVGLGLRYRL*
JGI25382J37095_101072652	3300002562	Grasslands Soil	LEGQLLVNFRVVGIGSSGAIRAEVGPSLHLWKSGDEVRQRAGAIAATAYEWPVAQRLSGAIRLEGIFSKSWFDARDLPPEFERQVTWRYGVGLGLRYRL*
Ga0066690_105628801	3300005177	Soil	GSSGAIRAELGPSLHLWKSDDETRSRAGVVVATAYEWPIASRFSGAIRLEGMLSKSWFEPGDLPSELERRVTWRYGIGLGLRYRL*
Ga0066690_109235012	3300005177	Soil	DLTLTDNSSGEVVEGQLLLNFQVVGIGSSGAVRMELGPSLHLWKGVDETRSRIGVVAASAYEWPVARRLSGAIRFEGMLSKSWFEPGDLPPELERRVTWRYSVGLGLRYRLNGG*
Ga0066684_103377731	3300005179	Soil	NVGLTAAGPGLILTDNSTGELLEGRLLGSFQVVGIGSSGAVRLELGPSLHLWTSGDQTRSRLGGTLATAYEWPIARRFSGAIRLETMFSKSWFDAGDVPPEYERRVTWRYGVGLGLRYRL
Ga0066676_110941871	3300005186	Soil	NSGGPETFRPANATAVGLRLERALGQARFGFQASYAGVGLTAAGPGLILTDNSTGQLIEGQLLLNFRVVGIGSSGAIRAEVGPSLHLWKSGDENRTRLGGVTALAYEWPVTKRFSGAIRLEGIVSKSWFDAGDLPPEYERQVTWLYGVGLGLRYRL*
Ga0070708_1009807442	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	QLLLNFQVAGIGSSGAVRMELGPSLHLWKAESESRSRAGAVAAAAYEWPVANRFSGAIRLEGMLSKSWFDPGDLPSELERRVTWRYGVGLGLRYRL*
Ga0066686_100097863	3300005446	Soil	MDRAVGRVRLGVQASYARVGLTAAAPHLTLTDNSVGQLVEGQLLVNFQVVGIGSSGAIRAELGPSLHLWKSDQEMRPRAGALGAVAYEWLVVSRLSGAIRVEGILSKSWFDPGDLPSELERRVTWRYGVGLGLRYRL*
Ga0066686_109704241	3300005446	Soil	VVGIGSSGAIRAEVGPSLHLWKSGDENRTRLGGVTALAYEWPVTKRFSGAIRLEGIVSKSWFDAGDLPPEYERQVTWLYGVGLGLRYRL*
Ga0066682_107070321	3300005450	Soil	MDRAVGRVRLGVQASYARVGLTAAAPHLTLTDNSVGQLLEGQLLVNFQVVGIGSSGAIRAELGPSLHLWKSDQEMRPRAGALGAVAYEWLVVSRLSGAIRVEGILSKSWFDPGDLPSELERRVTWRYGVGLGLRYRL*
Ga0066681_104973652	3300005451	Soil	LILTDNSAGQLLETQLLVNFRVVGIGSSGAIRAELGPSLHLWKSGDDVRQRAGAIVATAYEWPVAQRLSGAIRLEGMITKSWFDAGDLPPEFERQVTWRYGVGLGLRYRL*
Ga0070697_1009867862	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	EGQLLLNFQVVGIGSSGAVRMELGPSLHLWKADHETRSRAGAVAAAAYEWPIANGFSGAIRLEGMLSKSWFDPGDLPSELERRVTWRYGVGLGLRYRL*
Ga0066695_101375051	3300005553	Soil	QVVGIGSSGAIRAELGPSLHLWKSDQEMRPRAGALGAVAYEWLVVSRLSGAIRVEGILSKSWFDPGDLPSELERRVTWRYGVGLGLRYRL*
Ga0066692_106163032	3300005555	Soil	AIGRARLGLRASYASVGLTAAGPGLILTDNSTGQLLEGQLLVNFRVVGIGSSGAIRAEVGPSLHLWKSGDENRTRLGGVTALAYEWPVTKRFSGAIRLEGIVSKSWFDAGDLPPEYERQVTWLYGVGLGLRYRL*
Ga0066704_106943652	3300005557	Soil	FQASYAGVGLTAAGPGLILTDNSTGQLIEGQLLLNFRVVGIGSSGAIRAEVGPSLHLWKSGDENRTRLGGVTALAYEWPVTKRFSGAIRLEGIVSKSWFDAGDLPPEYERQVTWLYGVGLGLRYRL*
Ga0066705_102254302	3300005569	Soil	LGLQLAIANVGLTAAGPGLILTDNSTGELLEGRLLGSFQVVGIGSSGAVRLELGPSLHLWTSGDQTRSRLGATLATAYEWPIARRFSGAIRLETMFSKSWFDAGDVPPEYERRVTWRYGVGLGLRYRL*
Ga0075425_1022443751	3300006854	Populus Rhizosphere	VNFQVAGIGSSGAIRAEVGPSLHLWKSDSENRSRAGAIAAAAYEWPVAKRFSGAIRVEGILSKSWFDPGDLPSELERRATWRYGVGLGLRYRLSGG*
Ga0075434_1000200651	3300006871	Populus Rhizosphere	TGGPTTVRPGDATAFGIRVDRAIRRVRLGLQASFAPVGLTAAAPDLTLTDNSAGKLFEGQLLVNFQVAGIGSSGAIRAEVGPSLHLWKSDSENRSRAGAIAAVAYEWPVAKRFSGAIRVEGILSKSWFDPGDLPSELERRVTWRYGVGLGLRYRLSGG*
Ga0075434_1000708532	3300006871	Populus Rhizosphere	LNFQVVGIGSSGAVRMELGPSLHHWKAEDESRTRLGGVAAVAYEWPVAHRFSGAIRLEGIVSESWFDPGDLPSELERQVTWRYGVGLGLRYRL*
Ga0075426_100103631	3300006903	Populus Rhizosphere	TRVRPADATTFGVRVDRVIRRARLGLQVSYATVGLTASAPDLILTDNSSGEVFEGQLLLNFQVAGIGSSGAVRMELGPSLHLWKAESESRSRAGAVAAAAYEWPVANRFSGAIRLEGMLSKSWFDPGDLPSELERRVTWRYGVGLGLRYRL*
Ga0099791_100059613	3300007255	Vadose Zone Soil	LTLTDNSAGQLFEGQLLVNFQVGGIGSSGAVKLELGPSLHLWKSEDETRSRAGAVAAAAYEWPVASRLSGAIRIEGILSKSWFDAGDLPSELERRVTWRYGVGLGLRYRLTGG*
Ga0099791_106440182	3300007255	Vadose Zone Soil	ARVDLLASYGKAGLTATGPGLTLTDKTAGQLYEAEMLVNFQVAGIGSSGAIRAELGPSLHLWKSGDENRTRLGGVTALGYEWPVTRRFSGAIRLEGIFSKSWFDAGDLPPEYERQVTWRYGVGLGLRYRL*
Ga0099793_102214402	3300007258	Vadose Zone Soil	TLIDNATGQLLEGQVLANFQVVGIGSSGAIRAEVGPSLHLWKSGEELRSRAGAVAAAVYEWPVTNRFSGAIRLEGMISKSWFDNGDLPPEYERQATRRFGVGLGLRYRLSGG*
Ga0099794_100730882	3300007265	Vadose Zone Soil	LTLTDNSAGQLFEGQLLVNFQVGGIGSSGAVKLELGPSLHLWKSEDETRSRAGAVAAAAYEWPVARRLSGAIRIEGILSQSWFDAGDLPSELERRVTWRYGVGLGLRYRLTGG*
Ga0099795_103543242	3300007788	Vadose Zone Soil	MNHGIGRARVDLLASYGKAGLTATGPGLTLTDKTAGQLYEAEMLVNFQVAGIGSSGAIRAEVGPSLHLWKSGDENRTRAGAVGAVAYEWPLVKRIFGAIRLEGMLSKSWFDAGDLPSEYERQVTWRYGVGLGLRYRL*
Ga0099829_101738542	3300009038	Vadose Zone Soil	VGLTAAAPDLTLTDNSAGQLFEGQLLVNFQVGGIGSSGAVKLELGPSLHLWKSEDETRSRAGAVAAAAYEWPVARRLSGAIRIEGILSKSWFDAGDLPSELERRVTWRYGVGLGLRYRLIGG*
Ga0099829_109285322	3300009038	Vadose Zone Soil	TAAAPNLTLTDNSPGDVLEGQLLLNFQVVGIGSSGAIRAELGPSLHLWKSDDETRSRAGAVAAAAYEWPIANRFSGAIRFEGVLSKSWFDPGDLPSELERRVTWRYGVGLGLRYRL*
Ga0066709_1003345722	3300009137	Grasslands Soil	VGLQASYANVGLTATGPGLTLIDNSTGQLIEGQLVVNFRVVGIGSSGAIRAELGPSLHLWKSGDENRTRVGAMGALAYEWPVAKRFSGAIRLEGMISKSWFDDSDLPPEYERQATRRYGVGLALRYRL*
Ga0066709_1015479862	3300009137	Grasslands Soil	LILTDNSTGQLIEGQLLLNFRVVGIGSSGAIRAEVGPSLHLWKSGDENRTRLGGVTALAYEWPVTKRFSGAIRLEGIVSKSWFDAGDLPPEYERQVTWLYGVGLGLRYRL*
Ga0066709_1028817031	3300009137	Grasslands Soil	MDRAVGRVRLGVQASYARVGLTAAAPHLTLTDNSVGQLVEGQLLVNFQVVGIGSSGAIRAELGPSLHLWKSDQEMRPRAGALGAVAYEWLVVRRLSGAIRVEGILSKSWFDPGDLPSELERRVTWR
Ga0066709_1037220331	3300009137	Grasslands Soil	LTLTDNSAGELFEGQLLVNFQVVGIGSSGAIRAEVGPSLHLWKSDDETRSRGGAVAAAAYEWPVARRFSGAIRIEGILSKSWFDPGDLPSELERRVTWRYGVGLGLRYRL*
Ga0099796_101182132	3300010159	Vadose Zone Soil	GLILTDNSTGQLLEGQLLVNFRVVGIGSSGAIRAEVGPSLHLWKSGDETRTRAGGVGAVAYEWPVVKRIFGAIRLEGMLSKSWFDAGDLPPEYERQVTWRYGVGLGLRYRL*
Ga0134070_100722471	3300010301	Grasslands Soil	LLVNFQVVGIGSSGAIRAEVGPSLHLWKSDDETRSRGGAVAAAAYEWPVARRFSGAIRLEGILSKSWFDPGDLPSELERRVTWRYGVGLGLRYRL*
Ga0134086_100637021	3300010323	Grasslands Soil	MDRAVGRVRLAVHASYARVGLTAAAPHLTLTDNSVGQLLEGQLLVNFQVVGIGSSGAIRAELGPSLHLWKSDQEMRPRAGALGAVAYEWLVVSRLSGAIRVEGILSKSWFDPGDLPSELERRVTWRYGVGLGLRYRL*
Ga0134086_102051431	3300010323	Grasslands Soil	AAAPNLTLTDNSAGELFEGQLLVNFQVVGIGSSGAIRAEVGPSLHLWKSEDETRSRGGVVAAAAYEWPVARRFSGAIRLEGILSKSWFDPGDLPSELERRVTWRYGVGLGLRYRL*
Ga0134064_102785661	3300010325	Grasslands Soil	LTLTDNSAGELFEGQLLVNFQVVGIGSSGAIRAEVGPSLHLWKSEDETRSRGGVVAAAAYEWPVARRFSGAIRLEGILSKSWFDPGDLPSELERRVTWRYGVGLG
Ga0134111_100263751	3300010329	Grasslands Soil	MDRAVGRVRLGVQASYARVGLTAAAPHLTLTDNSVGQLLEGQFLVNFQVVGIGSSGAIRAELGPSLHLWKSDQEMRPRAGALGAVAYEWLVVSRLSGAIRVEGILSKSWFDPGDLPSELERRVTWRYGVGLGLRYRL*
Ga0134111_105271511	3300010329	Grasslands Soil	RVGVQAAYARLGLTGAGQGLVVTDNSTGRLLEGQLLVNFQVVGIGSSGAIRAELGPTLHLWKSADQRRSRAGAVAATAYEWPIANRFSGAIRLEGTISRSWFNAGDVPPEYERRVTWRYGVGLGLRYGL*
Ga0134080_100690872	3300010333	Grasslands Soil	LTLTDNSAGELFEGQLLVNFQVVGIGSSGAIRAEVGPSLHLWKSEDETRSRGGVVAAAAYEWPVARRFSGAIRLEGILSKSWFDPGDLPSKL
Ga0134063_101448432	3300010335	Grasslands Soil	YAGVGLTAAGPGLILTDNSTGQLIEGQLLLNFRVVGIGSSGAIRAEVGPSLHLWKSEDETRSRGGVVAAAAYEWPVARRFSGAIRLEGILSKSWFDPGDLPSELERRVTWRYGVGLGLRYRL*
Ga0137389_100087753	3300012096	Vadose Zone Soil	LTLTDNSAGQLFEGQLLVNFQVGGIGSSGAVKLELGPSLHLWKSEDETRSRAGAVAAAAYEWPVARRLSGAIRIEGILSKSWFDAGDLPSELERRVTWRYGVGLGLRYRLIGG*
Ga0137364_110280551	3300012198	Vadose Zone Soil	TDNSTGRLLEGQLLVNFQVVGIGSSGAIRAELGPTLHLWKGADERRSRAGAVAATAYEWPIANRFSGAIRFESTISKSWFDAGDVPPEYERRVTWRYGVGLGLRYRL*
Ga0137383_110986491	3300012199	Vadose Zone Soil	NSSGEVVEGQLLLNFQVVGIGSSGAVRMELGPSLHLWKGVDETRSRIGVVAASAYEWPVARRLSGAIRFEGMLSKSWFEPGDLPPELERRVTWRYGVGLGLRYRLSGG*
Ga0137382_100011464	3300012200	Vadose Zone Soil	LTLTDNSAGELFEGQLLVNFQVVGIGSSGAIRAEVGPSLHLWKSEDETRSRGGVVAAAAYEWPVARRFSGAIRIEGILSKSWFDPGDLPSELERRVTWRYGVGLGLRYRL*
Ga0137382_105695762	3300012200	Vadose Zone Soil	LLEGQLLANFQVVGIGSSGAIRAELGPTLHLWKSGDELRSRAGAVAAAAYEWPVTNRFSGAIRLEGTISKSWFDAGDLPPEFERQATLRYGVGLGLRYRL*
Ga0137382_109208341	3300012200	Vadose Zone Soil	QASYATVGLTAAAPDLTLTDNSSGEVLEGQVLLNFQVVGIGSSGAVRLEFGPSLHLWKGVDATRSRIGGIVASAYEWPVARRLSGAIRFEGMLSKSWFEPGDLPPELERRVTWRYGVGLGLRYRL*
Ga0137365_105047292	3300012201	Vadose Zone Soil	MDRAVGRVRLGVQASYARVGLTAAAPHLTLTDNSVGQLVEGQLLVNFQVVGIGSSGAIRAELGPSLHLWKSDQEMRSRAGALGAVAYEWLVARRLSGAIRVEGILSKSWFDPGDLPSELERRVTWRYGVGLGLRYRL*
Ga0137399_107975371	3300012203	Vadose Zone Soil	LEGKLLVNFQVAGIGSSGAIRAELGPSLHLWKSGDEVRRRAGATAATAYEWPVAQRLSGAIRLEGMLAKSWFDAGDLPPEYERQVTWRYGVGLGLRYRL*
Ga0137374_103686322	3300012204	Vadose Zone Soil	LEGQLLMNFQVVGIGSSGAIRAELGPSLHLWKSGDQNRTRVGALGAATYEWPVAPRFSGTIRLEGMISRSWFDNGDLPSEYERQATRRY
Ga0137362_111732791	3300012205	Vadose Zone Soil	QVVGIGSSGAVRMELGPSLHLWKGVDETRSRIGVVAASAYEWPVARRLSGAIRFEGMLSKSWFEPGDLPPELERRVTWRYGVGLGLRYRLSAG*
Ga0137380_100140402	3300012206	Vadose Zone Soil	LTLIDNSTGRVLEGELLANFQVVGIGSSGAIRAELGPSLHLWKSGDELRSRAGAVAAAAYEWPVTNRFSGAIRLEGTLSKSWFDAGDLPPEYERRVTWRYGVGLGLRYRL*
Ga0137380_101934662	3300012206	Vadose Zone Soil	VGLQASYGNVGLTATGPGLTLIDNSTGQLIEGQLVVNFRVVGIGSSGAIRAELGPSLHLWKSGDENRTRVGALGALAYEWPVAKRFSGAIRLEGMISKSWFDDGDLPPEYERQATRRYGVGLALRYRL*
Ga0137380_104450302	3300012206	Vadose Zone Soil	GRVRLGVQASYARVGLTAAAPHLTLTDNSVGQLVEGQLLVNFQVVGIGSSGAIRAELGPSLHLWKSDQEMRSRAGALGAVAYEWLVARRLSGAIRVEGILSKSWFDPGDLPSELERRVTWRYGVGLGLRYRL*
Ga0137376_100180533	3300012208	Vadose Zone Soil	LVLIDNSTGQLLEGQLLANFQVVGIGSSGAIRAEVGPSLHLWKSGDELRSRAGAVAAAAYEWPVTNRFSGAIRLEGTISKSWFDAGDLPPEFERQATLRYGVGLGLRYRL*
Ga0137379_111954212	3300012209	Vadose Zone Soil	GAIRAELGPSLHLWKSDQEMRSRAGALGAVAYEWLVARRLSGAIRVEGILSKSWFDPGDLPSELERRVTWRYGVGLGLRYRL*
Ga0137372_108788711	3300012350	Vadose Zone Soil	LTLTDNSAGELFEGQLLVNFQVVGIGSSGAIRAEVGPSLHLWKSDDETRSRGGAVAAAAYEWPVARRFSGAIRLEGILSKSWFDPGDLPSELERRVTWRYGVGLGLRYRL*
Ga0137386_107029782	3300012351	Vadose Zone Soil	GQLVEGQLLVNFQVVGIGSSGAIRAELGPSLHLWKSDQEMRSRAGALGAVAYEWLVARRLSGAIRVEGILSKSWFDPGDLPSELERRVTWRYGVGLGLRYRL*
Ga0137386_107043872	3300012351	Vadose Zone Soil	GQLVEGQLLVNFQVVGIGSSGAIRAELGPSLHLWKSDQEMRPRAGALGAVAYEWLVVSRLSGAIRVEGILSKSWFDPGDLPSELERRVTWRYGVGLGLRYRL*
Ga0137386_111234871	3300012351	Vadose Zone Soil	SAGELFEGQLLVNFQVVGIGSSGAIRAEVGPSLHLWKSDDETRSRGGAVAAAAYEWPVARRFSGAIRIEGILSKSWFDPGDLPSELERRVTWRYGVGLGLRYRL*
Ga0137367_100412922	3300012353	Vadose Zone Soil	LEGQLLMNFQVVGIGSSGAIRAELGPSLHLWKSGDQNRTRVGALGAATYEWPVAPRFSGTIRLEGMISRSWFDNGDLPSEYERQATRRYGVGLGLRYRL*
Ga0137371_103817381	3300012356	Vadose Zone Soil	MDRAVGRVRLGVQASYARVGLTAAAPHLTLTDNSVGQLLEGQLLVNFQVVGIGSSGAIRAELGPSLHLWKSDQEMRPRAGALGAVAYEWLVVSRLSGAIRVEGILSKSWFDPGDLPSELERRVTWRYGVGLGL
Ga0137368_101800472	3300012358	Vadose Zone Soil	LILIDNSTGQLLEGQLLANFQVVGIGSSGAIRAEVGPSLHLWKSGDQNRTRVGALGAAAYEWPVAQRFSGAIRLEGTLSKSWFDAGDLPPEYERQATLRYGVGLGLRYRL*
Ga0137375_100853802	3300012360	Vadose Zone Soil	LEGQLLMNFQVVGIGSSGAIRAELGPSLHLWKSGDQNRTRVGALGAATYEWPVAPRFSGTIRLEGMISRSWFDNGDLPSEYERQATLRYGVGLGLRYRL*
Ga0137375_101872372	3300012360	Vadose Zone Soil	LILIDNSTGHLLEGQLLANFQVVGIGSSGAIRAEVGPSLHLWKSGDELRSRAGAVAAAAYEWPVTNRFSGAIRLEGTVSKSWFDAGDLPPEYERQATLRYGVGLGLRYRL*
Ga0137360_109324261	3300012361	Vadose Zone Soil	VGLTAAAPDLTLTDNSAGQLFEGQLLVNFQVGGIGSSGAVKLELGPSLHLWKSEDETRSRAGAVAAAAYEWPVTNRFSGAIRLEGTVSKSWFDAGDLPPEYER
Ga0137373_106523881	3300012532	Vadose Zone Soil	RLGLQASFASVGLTATGPGLTLTDNSTGQLLEGQLLMNFQVVGIGSSGAIRAELGPSLHLWKSGDQNRTRVGALGAATYEWPVAPRFSGTIRLEGMISRSWFDNGDLPSEYERQATRRYGVGLGLRYRL*
Ga0137358_101139622	3300012582	Vadose Zone Soil	LVLIDNSTGQLLEGQLLANFQVVGIGSSGAIRAEVGPSLHLWKSGDELRSRAGAVAAAAYEWPVTNRFAGAIRLEGTMSKSWFDAGDLPPEYKRQATLRYGVGLGLRYRL*
Ga0137398_107674062	3300012683	Vadose Zone Soil	GLTAAGPGLTLIDNSTGQLLEGQLLANFQVVGIGSSGAVRAEVGPSLHLWKSGGELRSRAGAVAAAAYEWPVTNRFFGAIRLEGTVSKSWFDAGDLPPEFERQVTLRYGVGLGLRYRL*
Ga0137397_106941322	3300012685	Vadose Zone Soil	LANFQVVGIGSSGAIRAEVGPSLHLWKAEHETRSRVGAVAAAAYEWPIANHFSGAIRLEAMLSKSWFDPGDTPPEFERRVTWRYGVGLGLRYRL*
Ga0137395_104477171	3300012917	Vadose Zone Soil	AIRRVRLGVQVSYATISLTAAAPKLSLTDKSSGEVFEGQLLLNFQVAGIGSSGAVRIELGPSLHLWKAESESRSRAGGVAALAYEWPVTNRFSGAIRLEGMLSKSWFEPGDLPSELERQVTWRYGVGLGLRYRL*
Ga0137396_106130922	3300012918	Vadose Zone Soil	LVLIDNSTGQLLEGQLLANFQVVGIGSSGAIRAEVGPSLHLWKSGDELRSRAGAVAAAAYEWPVTNRFAGAIRLEGTMSKSWFDAGDLP
Ga0137419_109436611	3300012925	Vadose Zone Soil	LTLIDNSAGHLLEGQLLVNFRVVGIGSSGAIRAELGPSLHLWKSGDELRSRAGAIVATAYEWPVARRFSGALRLEGMISKSWFDAGDLPPEYERQVTWRYGVGLGLRYHL*
Ga0137407_107838532	3300012930	Vadose Zone Soil	LTLTDNSAGQLFEGQLLVNCQVVGIGSSGAILAEVGPSLHLWKSDAETRVRGGAVAAAAYEWPVAKRFSGAIRVEGILSKSWFDPGDLPSELERRVTWRYGVGLGLRYRL*
Ga0137407_111866472	3300012930	Vadose Zone Soil	LILIDNSTGHLLEGQLLANFQVVGIGSSGAIRAEVGPSLHLWKSGDELRSRAGAVAAAAYEWPVTNRFSGAIRLEGTMSKSWFDAGDLPPEYERQATLRYGVGLGLRYRL*
Ga0137410_100168572	3300012944	Vadose Zone Soil	MNHGIGRARVDLLASYGKAGLTATGPGLTLTDKTAGQLYEAEMLVNFQVAGIGSSGAIRAELGPSLHLWKSGDENRTRLGGVTALGYEWPVTRRFSGAIRLEGIFSKSWFDAGDLPPEYERQVTWRYGVGLGLRYRL*
Ga0137410_102496401	3300012944	Vadose Zone Soil	LEGQLLANFQVVGIGSSGAVRAEVGPSLHLWKSGGELRSRAGAVAAAAYEWPVTHRFSGAIRLEGTVSKSWFDAGDLPPEYERQVTWRYRVGLG
Ga0137410_103609631	3300012944	Vadose Zone Soil	NSSGEVLEGQLLLNFQVVGIGSSGAVRMELGPSLHLWKAEHETRSRVGAVAAAAYEWPIANHFSGAIRLEAMLSKSWFDPGDLPSELERQLTWRYGVGLGLRYRL*
Ga0137410_106056041	3300012944	Vadose Zone Soil	LVLTDNSTGRLLEGQLLMNFQVVGIGSSGAVRAELGPALHLWKSGDELRSRAGAVAAAAYEWPVANRFSGAIRLEGTVSKSWFDASDLPPEYERQVTWRYGVGLGLRYRL*
Ga0134076_101246721	3300012976	Grasslands Soil	LTLTDNSVGQLYEGQLLANFQVVGIGSSGAVKLELGPSLHLWKSDSETRSRGGAVAAAAYEWPVARRFSGAIRIEGILSKSWFDPGDLP
Ga0134075_100303491	3300014154	Grasslands Soil	LTLTDNSVGQLFEAQLLVNFQVGGIGSSGAVKLELGPSLHLWKSDSETRSRAGAVAAAAYEWPVARRFSGAIRIEGILSKSWFDLGDLPSELERRVTWRYGVGLGLRYRL*
Ga0134078_100126402	3300014157	Grasslands Soil	LTLTDNSAGELFEGQLLVNFQVVGIGSSGAIRAEVGPSLHLWKSDDETRSRGGAVAAAAYEWPVARRFSGAIRLEGILSKSWFDPGDLPSKLERRVTWRYGVGLGLRYRL*
Ga0137412_106418061	3300015242	Vadose Zone Soil	LQSLKFRAAIDGNTARTAEIGPTLHLWRLSDEVRSRLGALGALAYEWPIVARWSGAIRAEGTISRSWWNAGDLPPEYVRRPTWRYGMSFGLTYRL*
Ga0137409_104245312	3300015245	Vadose Zone Soil	MSVPAAGPGLVLIDNSTGQLLEGQLLANFQVVGIGSSGAIRAEVGPSLHLWKSGDELRSRAGAVAAAAYEWPVTNRFAGAIRLEGTMSKSWFDAGDLPPEYKRQATLRYGVGLGLRYQL*
Ga0137409_106989922	3300015245	Vadose Zone Soil	LTLTDNSAGQLFEGQLLVNFQVGGIGSSGAVKLELGPSLHLWKSEDETRSRAGAVAAAAYEWPVARRLSGAIRIEGILSKSWFDAGDLPSELERRVTWRYGVGLGLRYRLTGG*
Ga0134089_105592321	3300015358	Grasslands Soil	IGSSGAVKLELGPSLHLWKSDDETRSRAGAVAAAAYEWPVARRFSGAIRLEGILSKSWFDAGDLPSELERRVTWRYGVGLGLRYRL*
Ga0134074_12224122	3300017657	Grasslands Soil	MDRAVGRVRLGVQASYARVGLTAAAPHLTLTDNSVGQLLEGQLLVNFQVVGIGSSGAIRAELGPSLHLWKSDQEMRPRAGALGAVAYEWLVVSRLSGAIRVEGILSKSWFDPGDLPSELERRVTWRYGVGLGLRYRL
Ga0134083_104887041	3300017659	Grasslands Soil	LGQARFGLPASYAAVGLTAAGPGLILTDNSTGQLIEGQLLLNFRVVGIGSSGAIRAEVGPSLHLWKSGDENRTRLGGVTALAYEWPVTKRFSGAIRLEGIVSKSWFDAGDLPPEYERQVTWLYGVGLGLRYRL
Ga0066655_100991351	3300018431	Grasslands Soil	LVNFQVVGIGSSGAIRAEVGPSLHLWKSEDETRSRGGVVAAAAYEWPVARRFSGAIRLEGILSKSWFDPGDLPSELERRVTWRYGVGLGLRYRL
Ga0066655_103337651	3300018431	Grasslands Soil	YARVGLTAAAPQLTLTDNSVGQLVEGQLLVNFQVVGIGSSGAIRAALGPSLHLWKSDQEMRPRAGALGAVAYEWLVVSRLSGAIRVEGILSKSWFDPGDLPSELERRVTWRYGVGLGLRYRL
Ga0193713_11338481	3300019882	Soil	GEGFEGQLLLNFQVAGIGSSGAVRIELGPSLHLWKAESESRSRAGGVAAVAYEWPVTNRFSGAIRLEGMLSKSWFDPGDLPSELERQVTWRYGVGLGLRYRL
Ga0179594_101162281	3300020170	Vadose Zone Soil	LIDNSTGQLLEGQLLANFQVVGIGSSGAIRAEVGPSLHLWKSGDELRSRAGAVAAAAYEWPVTNRFSGAIRLEGTMSKSWFDAGDLPPEYERQATLRYGVGLGLRYRL
Ga0210378_100450071	3300021073	Groundwater Sediment	GQRVEGQLLVNFRVVGIGSSGAMRAEVGPSLHLWKSGDQTRRRLGALAAVGYEWPVANRFSGALRLEGMMSKSWFDPGDVPPEYERRVTWRYGVGLGLRYRL
Ga0222623_103796481	3300022694	Groundwater Sediment	PSSLRPADGTAVGLRVDRAIGPAGVGLHVSYATVGLTAAAPGLTLTDNSMGHLFEGQLLVNFRVVGIGSSGAIRAELGPSLHLWKSGDDDRTRVGAVGAAAYEWPVAKRFSGAIRLEGMLSKSWFDPGDLPSELERRVTWRYGVGLGLRYRL
Ga0207646_109607041	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	TDNSSGEVFEGQLLLNFQVAGIGSSGAVRMELGPSLHLWKAESESRSRAGAVAAAAYEWPVANRFSGAIRLEGMLSKSWFDPGDLPSELERRVTWRYGVGLGLRYRL
Ga0209438_11153482	3300026285	Grasslands Soil	GLTAAGPGLILIDNSTGHLLEGQLLANFQVVGIGSSGAIRAEVGPSLHLWKSGDELRSRAGAVAAAAYEWPVTNRFAGAIRLEGTMSKSWFDAGDLPPEYKRQATLRYGVGLGLRYRL
Ga0209237_11331061	3300026297	Grasslands Soil	YATVGLTAAAPDLTLTDNSSGEVLEGQLLLNFQVVGIGSSGAIRAELGPSLHLWKSDDETRSRAGVVVATAYEWPIASRFSGAIRLEGMLSKSWFEPGDLPSELERRVTWRYGIGLGLRYRL
Ga0209155_10303061	3300026316	Soil	ALQASYAHVGLTAAAPNLTLTDNSAGELFEGQLLVNFQVVGIGSSGAIRAEVGPSLHLWKSEDETRSRGGVVAAAAYEWPVARRFSGAIRLEGILSKSWFDPGDLPSELERRVTWRYGVGLGLRYRL
Ga0209131_10788431	3300026320	Grasslands Soil	TAAAPNLTLTDNSSGQLFEGQLLVNFQVVGIGSSGAIRAEVGPSLHLWKSDAETRARGGAVAAAAYEWPVATRFSGAIRVEGILSKSWFDPGDLPSELERRVTWRYGVGLGLRYRL
Ga0209803_12699482	3300026332	Soil	LILTDNSTGQLIEGQLLLNFRVVGIGSSGAIRAEVGPSLHLWKSGDENRTRLGGVTALAYEWPVTKRFSGAIRLEGIVSKSWFDAGDLPPEYERQVTWLYGVGLGLRYRL
Ga0209056_100298381	3300026538	Soil	PGLILTDNSTGQLLEGQLLVNFRVVGIGSSGAIRAELGPSLHLWKSGDEVRQRAGATAATAYEWPLARRLSGAIRLEGIFSKSWFDAGDLPPEFERQVTWRYGVGLGLRYRL
Ga0209161_102209971	3300026548	Soil	VGLQASYANVGLTATGPGLTLIDNSTGQLIEGQLVVNFRVVGIGSSGAIRAELGPSLHLWKSGDENRTRVGAMGALAYEWPVAKRFSGAIRLEGMISKSWFDNGDLPPEYERQATRRYGVGLALR
Ga0209076_11027592	3300027643	Vadose Zone Soil	VAVLASYGKTGLTATGPGLTLTDKTAGELFEGEILLNFQVVGIGSSGAIRAELGPSLHLWKSGDEMRSRVGAMVATAYEWPVARRFSGALRLEGMISKSWFDAGDLPPEYERQATRRFGVGLGLRYRLSGG
Ga0209388_10510642	3300027655	Vadose Zone Soil	GLTATGPGLTLTDKTAGQLYEAEMLVNFQVAGIGSSGAIRAELGPSLHLWKSEDETRSRAGAVAAAAYEWPVASRLSGAIRIEGILSKSWFDAGDLPSELERRVTWRYGVGLGLRYRLTG
Ga0209488_1000332511	3300027903	Vadose Zone Soil	MLVNFQVVGIGSSGAIRAEVGPSLHLWKSGDENRTRAGAVGAVAYEWPLVKRIFGAIRLEGMLSKSWFDAGDLPSEYERQVTWRYGVGLGLRYRL
Ga0209382_104152053	3300027909	Populus Rhizosphere	IGPSGAIRAALGPALHLWKFGDEIRMRVGAISNVSYEWPIAGRFLGAVNLEGILSKSWFDAADLPPEYERQVTWRYGVGLALRYRL
Ga0137415_110934011	3300028536	Vadose Zone Soil	AIGRARLGLRASYASVGLTAAGPGLILTDNSTGQLLEGQLLVNFQVVGIGSSGAIRAELGPSLHLWKSGDQVRQRAGATAATAYEWPVAQRLGAAIRLEGTISKSWFDAGDLPPEFERQVTWRYGVGLGLRYRL
Ga0307301_101843811	3300028719	Soil	GQLLVNFQVVGIGSSGAIRAELGPTLHLWKSADERRSRTGAVAATAYEWPIANRFSGAIRLEGTISKSWFDAGDVPPEYERRVTWRYGVGLGLRYRL
Ga0307282_105725472	3300028784	Soil	GPQTFRPANATQWGLRFDRAVGRTVLAVRAAYARVGLTAAGPGLTLIDNSTGQLLEGQVLVNFQVAGIGSSGAIRAEVGPSLHLWKSGDENRVRMGGAGGVAYEWPITNRFSGAIRLEGTISKSWFDAGDLPPEYERQVTWRYSVGLGLRYRL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F086731

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences