Metagenome / Metatranscriptome Family F086753

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086753
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	59 residues
Representative Sequence	MFDPVQAPSLRHAFELVNAAILEADSRLRHQILDRARDQDFAGTRFRGDARADVKRETEH
Number of Associated Samples	100
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	89.09 %
% of genes near scaffold ends (potentially truncated)	98.18 %
% of genes from short scaffolds (< 2000 bps)	94.55 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.818 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.727 % of family members)
Environment Ontology (ENVO)	Unclassified (27.273 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.364 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.36% β-sheet: 0.00% Coil/Unstructured: 38.64%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF04392	ABC_sub_bind	2.73
PF00497	SBP_bac_3	1.82
PF06684	AA_synth	1.82
PF07238	PilZ	1.82
PF00211	Guanylate_cyc	1.82
PF03741	TerC	1.82
PF07883	Cupin_2	1.82
PF00033	Cytochrome_B	0.91
PF00891	Methyltransf_2	0.91
PF02635	DrsE	0.91
PF00149	Metallophos	0.91
PF14437	MafB19-deam	0.91
PF01979	Amidohydro_1	0.91
PF00571	CBS	0.91
PF13610	DDE_Tnp_IS240	0.91
PF02775	TPP_enzyme_C	0.91
PF13602	ADH_zinc_N_2	0.91
PF07681	DoxX	0.91
PF01738	DLH	0.91
PF00486	Trans_reg_C	0.91
PF02615	Ldh_2	0.91
PF07045	DUF1330	0.91
PF09837	DUF2064	0.91
PF00654	Voltage_CLC	0.91
PF05990	DUF900	0.91
PF10108	DNA_pol_B_exo2	0.91
PF02518	HATPase_c	0.91
PF01548	DEDD_Tnp_IS110	0.91
PF00487	FA_desaturase	0.91
PF00881	Nitroreductase	0.91
PF03466	LysR_substrate	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.73
COG0861	Tellurite resistance membrane protein TerC	Inorganic ion transport and metabolism [P]	1.82
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	1.82
COG0038	H+/Cl- antiporter ClcA	Inorganic ion transport and metabolism [P]	0.91
COG1290	Cytochrome b subunit of the bc complex	Energy production and conversion [C]	0.91
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.91
COG2055	Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family	Energy production and conversion [C]	0.91
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.91
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.91
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.91
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.91
COG4782	Esterase/lipase superfamily enzyme	General function prediction only [R]	0.91
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.82 %
Unclassified	root	N/A	8.18 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.82 %
Unclassified	root	N/A	8.18 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.82 %
Unclassified	root	N/A	8.18 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	82.73 %
Unclassified	root	N/A	8.18 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.91 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	74.55 %
Unclassified	root	N/A	8.18 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.82 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	15.45 %
Unclassified	root	N/A	8.18 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.64 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.91 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.91 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	10.00 %
Unclassified	root	N/A	8.18 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.64 %
Roseiarcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae	0.91 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.91 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.91 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.91 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.91 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	9.09 %
Unclassified	root	N/A	8.18 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.64 %
Roseiarcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus	0.91 %
Trinickia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Trinickia	0.91 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.91 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.91 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.91 %
unclassified Bradyrhizobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae	0.91 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	0.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.18 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.64 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.82 %
unclassified Azospirillum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum	0.91 %
Roseiarcus fermentans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	0.91 %
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	0.91 %
unclassified Methylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium	0.91 %
unclassified Trinickia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Trinickia → unclassified Trinickia	0.91 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.91 %
Bradyrhizobium canariense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense	0.91 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.91 %
Mesorhizobium amorphae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium amorphae	0.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.18 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.64 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.82 %
Methylobacterium sp. E-065	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. E-065	0.91 %
Azospirillum sp. B21	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum → Azospirillum sp. B21	0.91 %
Trinickia sp. DHG64	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Trinickia → unclassified Trinickia → Trinickia sp. DHG64	0.91 %
Pseudonocardia alaniniphila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia alaniniphila	0.91 %
Bradyrhizobium sp. 2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 2	0.91 %
Roseiarcus fermentans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	0.91 %
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	0.91 %
Bradyrhizobium canariense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense	0.91 %
Mesorhizobium amorphae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium amorphae	0.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000655\|AF_2010_repII_A100DRAFT_1062270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	661	Open in IMG/M
3300000858\|JGI10213J12805_10492470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1167	Open in IMG/M
3300001545\|JGI12630J15595_10090304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	602	Open in IMG/M
3300002245\|JGIcombinedJ26739_100616968	All Organisms → cellular organisms → Bacteria → Proteobacteria	962	Open in IMG/M
3300002245\|JGIcombinedJ26739_100861400	Not Available	787	Open in IMG/M
3300002568\|C688J35102_119013166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	626	Open in IMG/M
3300003659\|JGI25404J52841_10070607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	730	Open in IMG/M
3300004082\|Ga0062384_100359410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	925	Open in IMG/M
3300004267\|Ga0066396_10071044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	598	Open in IMG/M
3300005332\|Ga0066388_100862113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1489	Open in IMG/M
3300005363\|Ga0008090_10081214	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300005434\|Ga0070709_10195960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1428	Open in IMG/M
3300005435\|Ga0070714_101273506	Not Available	718	Open in IMG/M
3300005437\|Ga0070710_10666476	Not Available	731	Open in IMG/M
3300005439\|Ga0070711_100783830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	807	Open in IMG/M
3300005458\|Ga0070681_10407090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1272	Open in IMG/M
3300005518\|Ga0070699_100177270	All Organisms → cellular organisms → Bacteria	1890	Open in IMG/M
3300005530\|Ga0070679_100031330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5252	Open in IMG/M
3300005602\|Ga0070762_11215938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	521	Open in IMG/M
3300005610\|Ga0070763_10855102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	540	Open in IMG/M
3300005843\|Ga0068860_102854089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	501	Open in IMG/M
3300006052\|Ga0075029_100888232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	610	Open in IMG/M
3300006059\|Ga0075017_101219065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	589	Open in IMG/M
3300006102\|Ga0075015_100915342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	532	Open in IMG/M
3300006102\|Ga0075015_100975193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	517	Open in IMG/M
3300006845\|Ga0075421_101691070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	685	Open in IMG/M
3300006871\|Ga0075434_100272177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1713	Open in IMG/M
3300006893\|Ga0073928_10031887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5047	Open in IMG/M
3300015371\|Ga0132258_12338554	Not Available	1340	Open in IMG/M
3300016319\|Ga0182033_11765528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	561	Open in IMG/M
3300016422\|Ga0182039_10744324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	867	Open in IMG/M
3300016422\|Ga0182039_10907513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	787	Open in IMG/M
3300017946\|Ga0187879_10360828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense	806	Open in IMG/M
3300017959\|Ga0187779_10730930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	671	Open in IMG/M
3300017975\|Ga0187782_11173428	Not Available	600	Open in IMG/M
3300017975\|Ga0187782_11339222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	562	Open in IMG/M
3300017975\|Ga0187782_11685258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	502	Open in IMG/M
3300018006\|Ga0187804_10329438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	669	Open in IMG/M
3300018007\|Ga0187805_10337860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	695	Open in IMG/M
3300018017\|Ga0187872_10320493	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300018043\|Ga0187887_10782229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	564	Open in IMG/M
3300018057\|Ga0187858_10709303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	600	Open in IMG/M
3300018060\|Ga0187765_10066099	All Organisms → cellular organisms → Bacteria → Proteobacteria	1900	Open in IMG/M
3300018062\|Ga0187784_10051526	All Organisms → cellular organisms → Bacteria	3332	Open in IMG/M
3300018085\|Ga0187772_11310066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	536	Open in IMG/M
3300019082\|Ga0187852_1320082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	615	Open in IMG/M
3300020580\|Ga0210403_10875546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	710	Open in IMG/M
3300020582\|Ga0210395_10309440	Not Available	1188	Open in IMG/M
3300021168\|Ga0210406_10255878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1435	Open in IMG/M
3300021168\|Ga0210406_10753006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	745	Open in IMG/M
3300021171\|Ga0210405_10780899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	733	Open in IMG/M
3300021401\|Ga0210393_10344890	Not Available	1212	Open in IMG/M
3300021432\|Ga0210384_10537441	All Organisms → cellular organisms → Bacteria → Proteobacteria	1052	Open in IMG/M
3300021477\|Ga0210398_10563000	Not Available	927	Open in IMG/M
3300021478\|Ga0210402_10453937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1190	Open in IMG/M
3300021479\|Ga0210410_10120729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2324	Open in IMG/M
3300021479\|Ga0210410_10497534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 2	1089	Open in IMG/M
3300022504\|Ga0242642_1071105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	573	Open in IMG/M
3300022557\|Ga0212123_10251593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1268	Open in IMG/M
3300022722\|Ga0242657_1132820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	642	Open in IMG/M
3300022724\|Ga0242665_10285885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	573	Open in IMG/M
3300022726\|Ga0242654_10409402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	522	Open in IMG/M
3300025464\|Ga0208076_1065395	Not Available	631	Open in IMG/M
3300025898\|Ga0207692_10292543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium amorphae	989	Open in IMG/M
3300025912\|Ga0207707_10335179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1305	Open in IMG/M
3300025915\|Ga0207693_10079827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2561	Open in IMG/M
3300025921\|Ga0207652_10183030	All Organisms → cellular organisms → Bacteria	1883	Open in IMG/M
3300025929\|Ga0207664_11014065	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300025938\|Ga0207704_11299539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	622	Open in IMG/M
3300027575\|Ga0209525_1135081	All Organisms → cellular organisms → Bacteria → Proteobacteria	570	Open in IMG/M
3300027738\|Ga0208989_10051778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1419	Open in IMG/M
3300027855\|Ga0209693_10598208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	521	Open in IMG/M
3300027879\|Ga0209169_10647094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	550	Open in IMG/M
3300027894\|Ga0209068_10533687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	679	Open in IMG/M
3300027895\|Ga0209624_10260627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. E-065	1153	Open in IMG/M
3300027898\|Ga0209067_10634026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	616	Open in IMG/M
3300027908\|Ga0209006_10029642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	4960	Open in IMG/M
3300028047\|Ga0209526_10817401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	575	Open in IMG/M
3300028792\|Ga0307504_10423421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	528	Open in IMG/M
3300030737\|Ga0302310_10591551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	587	Open in IMG/M
3300031122\|Ga0170822_14014631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	644	Open in IMG/M
3300031231\|Ga0170824_106497045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	528	Open in IMG/M
3300031231\|Ga0170824_106796550	All Organisms → cellular organisms → Bacteria → Proteobacteria	771	Open in IMG/M
3300031231\|Ga0170824_108448319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	565	Open in IMG/M
3300031446\|Ga0170820_16014201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	511	Open in IMG/M
3300031469\|Ga0170819_11328801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	624	Open in IMG/M
3300031474\|Ga0170818_107509321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	532	Open in IMG/M
3300031474\|Ga0170818_110172570	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300031708\|Ga0310686_101075211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum → Azospirillum sp. B21	1108	Open in IMG/M
3300031718\|Ga0307474_10711523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	793	Open in IMG/M
3300031744\|Ga0306918_10543672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia alaniniphila	910	Open in IMG/M
3300031748\|Ga0318492_10761693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	520	Open in IMG/M
3300031753\|Ga0307477_10333578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Trinickia → unclassified Trinickia → Trinickia sp. DHG64	1044	Open in IMG/M
3300031754\|Ga0307475_10585056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	894	Open in IMG/M
3300031765\|Ga0318554_10827046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	517	Open in IMG/M
3300031768\|Ga0318509_10643996	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300031793\|Ga0318548_10557306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	558	Open in IMG/M
3300031820\|Ga0307473_10734705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	697	Open in IMG/M
3300031942\|Ga0310916_11376912	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300031945\|Ga0310913_10496922	All Organisms → cellular organisms → Bacteria → Proteobacteria	866	Open in IMG/M
3300031954\|Ga0306926_12023852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	647	Open in IMG/M
3300032001\|Ga0306922_11908090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	581	Open in IMG/M
3300032044\|Ga0318558_10280219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	823	Open in IMG/M
3300032067\|Ga0318524_10301976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	828	Open in IMG/M
3300032094\|Ga0318540_10648277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	509	Open in IMG/M
3300032174\|Ga0307470_11874567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	509	Open in IMG/M
3300032205\|Ga0307472_100830651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	847	Open in IMG/M
3300032261\|Ga0306920_103731413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	558	Open in IMG/M
3300032955\|Ga0335076_10653760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	933	Open in IMG/M
3300033289\|Ga0310914_11894849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	501	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.55%
Host-Associated	Host-Associated	5.45%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.00%
Aquatic	Environmental → Aquatic	14.55%
Plants	Host-Associated → Plants	5.45%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.09%
Freshwater	Environmental → Aquatic → Freshwater	7.27%
Sediment	Environmental → Aquatic → Sediment	5.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.64%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.82%
Peat	Environmental → Terrestrial → Peat	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.27%
Loam	Environmental → Terrestrial → Soil → Loam	24.55%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.27%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.45%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.73%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.82%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	42.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.91%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.27%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.73%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.82%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.82%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	1.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.82%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.91%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.91%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	8.18%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.36%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.36%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.45%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.45%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.55%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.64%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.64%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.82%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.82%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.91%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.91%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.91%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.91%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025464	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A100DRAFT_10622701	3300000655	Forest Soil	MIDPVQAPPLRHTFELVNASIFEADSRLRHQILDRARDQDFAGTRFRGDARPD
JGI10213J12805_104924702	3300000858	Soil	MIDPVQAPPLRHTFELVNAPILEADSRLRHQILDRTRDQDFAGTRFRGDARPDVKRETKH
JGI12630J15595_100903043	3300001545	Forest Soil	MIDPVQAPPLRHAFELVNASILEANSRLRHQILDRARDQDFAGTRFRGDARPDVKRET
JGIcombinedJ26739_1006169683	3300002245	Forest Soil	MFDTVQAPPLRHAFESVNAAIPKADSRLRHQILDRARNQDFAGTRFRGDARADVKRET
JGIcombinedJ26739_1008614001	3300002245	Forest Soil	MFDPVQAPSLRHAFESVNAAILEADFRLRHQILDRARDQDFAGTRFRGDARADVK
C688J35102_1190131662	3300002568	Soil	MFDPVQAPSLGHPFELVNAAILESNSRLRHQVLDRARDQDFAGTRFRGDARADV
JGI25404J52841_100706072	3300003659	Tabebuia Heterophylla Rhizosphere	MFDPVQPPAPWHALELMNATILEADCRLLHQVLDRARDQDFAGTCLRGDARTDVKCETDHVGSAL
Ga0062384_1003594103	3300004082	Bog Forest Soil	MFDPVQSPSLRHAFESVNAAILETDSRLRHQILDCAGDQDFAGTRFRCDARADVKRET
Ga0066396_100710441	3300004267	Tropical Forest Soil	MIDPVQAPPLRHAFELVNASILEANSRLRHQILDRARDQDFAGTRFRGDAR
Ga0066388_1008621131	3300005332	Tropical Forest Soil	MIDPVQAPPLRHAFELVNASILEADSRLRHQILDRARDQDFAGTRFRGDARPDVKRETKH
Ga0008090_100812141	3300005363	Tropical Rainforest Soil	MIDPVQAPPLRHTFELVNASIFEADSRLRHQILDRARDQDFAGTRFRGDARPDVKRETKH
Ga0070709_101959601	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MLDPVQAPSLRHAFQLVNAAILETGSRLRHQILDRARDQDFAGTRF
Ga0070714_1012735061	3300005435	Agricultural Soil	MFDPVQAPSLRQAFELVNAAILEADSRLRHQILDRARDKDFAGTRFSGDA
Ga0070710_106664761	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MPALEFPSILDPVQAPSLRHAFEPVDAMIPEADLGLRHQVPDRARDQDFTGAGFRGDAGADVKGETDHFAAAD
Ga0070711_1007838301	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MFDPVQAPSLRHAFELVNAAILEADSGLQHQILDRARDQDFAGTRFRGDARADVKRET
Ga0070681_104070902	3300005458	Corn Rhizosphere	MFDPVQAPSLRDTFELVNAAVLEADSRLRHQIPDGARDQDFAGTRFRGDAR
Ga0070699_1001772701	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MFDSVEAPSLRHAPELVNAAILEADSRLRHQILDRARDQDFAGTRFRGDAR
Ga0070679_10003133012	3300005530	Corn Rhizosphere	MFDPVQAPSLRHAFELVNAAILEADSRLRHQILDRARDQDFAGTRFRGDARADV
Ga0070762_112159381	3300005602	Soil	MFDPVQAPPLRHAFESVNAAILKADSGLRHPILDRARNQDFAGTRFRGDARADVKRETDHVSPTHFVF
Ga0070763_108551021	3300005610	Soil	MFDPVEAPSLRHAFELVNAAILEADSRLRHQILDRARDQDFAGTRFRGDARADVKRETDHVS
Ga0068860_1028540892	3300005843	Switchgrass Rhizosphere	MFDPVQAPSLRHAFELVNAAILEADSRLRHQILDRARDQDFAGTRLRGDA
Ga0075029_1008882322	3300006052	Watersheds	MFDPVQAPPLWNAFESVNAAILKADSRLRHQILDRARNQDFAGTRFRG
Ga0075017_1012190651	3300006059	Watersheds	MFDPVQAPPLGHAFESVNAAILKADSRLRHQILDRARNQDFAGTRFRGDAR
Ga0075015_1009153421	3300006102	Watersheds	MFDPVQAPPLRHAFESVNAAILKADSRLRHPILDRARNQDFAGTRFRGDARADVKRETDHVSPTHFV
Ga0075015_1009751931	3300006102	Watersheds	MFDPVQAPPLGNAFESVNAAILKADSRLRHQILDRARNQDFAGTRFRGDAR
Ga0075421_1016910702	3300006845	Populus Rhizosphere	MIDPVQPPPLRHAFELVNAAILEADFRLRHQILDRARDQDFAGTRFGGDARADVKREP
Ga0075434_1002721772	3300006871	Populus Rhizosphere	MFDPVQAPSLRHTFELVNAAVLEADSRLRHQTLDGAGDQDFAGTRFRGDARPM*
Ga0073928_100318878	3300006893	Iron-Sulfur Acid Spring	MFDPVQAPSLRHAFESVNAAILEADSRLRHQILDRARDQDFAGTRFRGDARADV
Ga0132258_123385543	3300015371	Arabidopsis Rhizosphere	MSTFAEHLLMFDPVQPTPLRHAFESVNAAILKVDSRLRQQILDRARNQDFAGTRLRGDA
Ga0182033_117655281	3300016319	Soil	MFDPVQAPSLRHAFELVKAAILEANSRLRHQILDRTGDQDFAGTRFRGNARADMKRETEHLRPAHLV
Ga0182039_107443242	3300016422	Soil	MFDPVQAPPLGHAFESVNAAILKAHSRLRHQILDRARNQDFAGTRF
Ga0182039_109075131	3300016422	Soil	MFDPVQAPSFRHTFELVNAAIREADSRLRHQILDRARNQDFAGTRFRGDARADVKRETEH
Ga0187879_103608282	3300017946	Peatland	MFEMFDPVQPPSLWHAFELVDAAILEADSRLRHQILDCARDQDFAGTRFRGDARADVKRETEHLRPAHSV
Ga0187779_107309302	3300017959	Tropical Peatland	MFDPVQAPSFRHAFESVNAAILEAESRLRHQILDRARDQDFAGTRFRSDARADVKR
Ga0187782_111734281	3300017975	Tropical Peatland	MSLWSRYRTDRKPMSTLAGHLSIFDPVQAPPLGHAFESVNAAILKADAGLRHQIPDRARNQDFAGTRFRGDARADVKRETDH
Ga0187782_113392221	3300017975	Tropical Peatland	MFNPVKAPALGHAFEPVNAAILKAHSRLGHQILDRARNQDFAGPCFRSDARADVKREADH
Ga0187782_116852581	3300017975	Tropical Peatland	MSTFAGHLLLFDPVQAPPLGHAFESVNAAILKADTGLRHQILDRARNQDFTGTRFRGDAR
Ga0187804_103294381	3300018006	Freshwater Sediment	MFDPVQAPPLGHAFESVNAAILKADSRLRHQILDRARNQDFTGTRFRGDARADVKRETDHVSPTHFE
Ga0187805_103378602	3300018007	Freshwater Sediment	MFDPVQAPSLRHAFELVNAAILEADSRLRHQILDRARDKDFAGTRFRGDARADVKRE
Ga0187872_103204931	3300018017	Peatland	MFDPVQAPSLRHAFELVNAAILEADSRLRHQILDRARDQDFAGTRFRGDARADVKRETEHLSPAHSVFAR
Ga0187887_107822292	3300018043	Peatland	MFEMFDPVQPPSLWHAFELVDAAILEADSRLRHQILDCARDQDFAGTRFRG
Ga0187858_107093032	3300018057	Peatland	MSTFAGHLLLFDPVQAPPLGYAFEAVSAAILKADSRLRHQILDRARNQDFTGTRFRGDARADVKRETDHV
Ga0187765_100660991	3300018060	Tropical Peatland	MFDPVQAPSFRHTFELVNAAIREADSRLRHQILDRARNQDFAGTRFRSDARADVKRETEHLRPA
Ga0187784_100515261	3300018062	Tropical Peatland	MSTFAGHLLLFDPVQAPPLGHAFETVNAAILKAGSRLRHQILDRARNQDFAGTRF
Ga0187772_113100661	3300018085	Tropical Peatland	MLDPEEAPPLGHAFESVNAAILKADSRLRHQILDRARNQDFAGTRFRGDARADVKRETDHVSPTH
Ga0187852_13200822	3300019082	Peatland	MFDPVQAPSLRHAFELVNAAILEADSRLRHQILDRARNQDFTGTRFRGDARADVKRETD
Ga0210403_108755461	3300020580	Soil	MFDLVQAPSLRHAFELVNAAILEADSGLRHQILDRARDQDFAGARFRGDA
Ga0210395_103094401	3300020582	Soil	MFDPVQPPPLRHAFESVNAAILKADSRLRHQILDRARNQDFAGTRLRGD
Ga0210406_102558781	3300021168	Soil	MFDPVQAPPLRHAFESVNAAILKADSGLRHPILDRARNQDFAGTRFRGDARADVKRETDH
Ga0210406_107530062	3300021168	Soil	MFDPVQAPSLRHAFELVNAAILEADSRLRHQILDRARDQDFAGTRFRGDARADVKRETEHLSPAHLVFARVQPHPD
Ga0210405_107808991	3300021171	Soil	MFDPVQPPPLRHAFESVNAAILKADSRLRHQILDRARNQDFAGTRFRGDARADVKRETDHVGPT
Ga0210393_103448901	3300021401	Soil	MFDPVQAPSFRHALEMVNAAILEADSRLRHQILDRAGDQDFAGARF
Ga0210384_105374413	3300021432	Soil	MLDLVQAPSLRHAPELVNPAILEADSGLTHQILDRARDQDFAGTRLRRNARADVKRKTEYLRPA
Ga0210398_105630001	3300021477	Soil	MFDPVQAPSLRHAFELVNAVILEADSRLRHQILDRARDKDFAGTRFSADARADVKRETEHLCSAHL
Ga0210402_104539374	3300021478	Soil	MFDPVQAPSLRHAFELVNAAILEADSRLRHQILDRARDQDFAGARFRGDARADVKRETEHLSPAHFVFARV
Ga0210410_101207291	3300021479	Soil	MFDPVQAPSLRHAPELVNAAILEADSRLRHQILDRARDQDFAGTRFRGDARADVKRET
Ga0210410_104975341	3300021479	Soil	MFDAVQVPSLRHAFQPVNAAILEVDSRLRHQFLDRARDQDFAGTR
Ga0242642_10711052	3300022504	Soil	MFDPVQAPSLRQAFELVNAAILEADSRLRHQILDRARNQDFAGARFRGDARADVKRETD
Ga0212123_102515931	3300022557	Iron-Sulfur Acid Spring	MSTFAGHLLLFDPVQAPPLGHAFESVSAAILKADSRLRHQILDRTRNQDFTGTRFR
Ga0242657_11328201	3300022722	Soil	MFDPVQAPSLRHAFELVNAVILETGSRLRHQILDRARDKDFAGTRFSGDARANVKRETEYLRSAHVVLARVQPH
Ga0242665_102858852	3300022724	Soil	MFDPVQAPSLRHAFELVNAAILEADSRLRHQIFDRARDQDFAGTRFRGDAS
Ga0242654_104094021	3300022726	Soil	MFDPVQAPPLGHAFESVSTAILKADSRLQHQILDRARNQDFTGTRFRGDARADVKRETD
Ga0208076_10653952	3300025464	Arctic Peat Soil	MFNPVQAPSLRHALELVNTAILEADPGLRHQILDRARDQDFAGTRFR
Ga0207692_102925434	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MFDPVQAPSLRHAFELVNAVILEADSRLQHQILDRARDKDFAGTRFSADARADVKRE
Ga0207707_103351793	3300025912	Corn Rhizosphere	MFDPVQAPSLRDTFELVNAAVLEADSRLRHQIPDGARDQDFAGTRFRG
Ga0207693_100798274	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MLDPVQAPSLRHAFQLVNAAILETGSRLRHQILDRARDQDFAGTRFLGDTRPDVKRETEHFSPAHF
Ga0207652_101830304	3300025921	Corn Rhizosphere	MFDPVQAPSLRHAFELVNAAILEADSRLRHQILDRARDQDFAGTRFRGDARADVKRETDQLRPAHGV
Ga0207664_110140652	3300025929	Agricultural Soil	MFDPVQAPSLRHAPELVNAAILEADSRLRHQILDRARDQDFAGTRFRGDARADMKRETEHLSPAHFV
Ga0207704_112995391	3300025938	Miscanthus Rhizosphere	MFDPVQAPSLRHAFELVNAAILEADSRLRHQIFDRARDQDFAGTRFRGDASADVKRE
Ga0209525_11350811	3300027575	Forest Soil	MLDPVQAPSLRHAFELVNAAILEADSGLRHQILDRARDQDFAGTRFRRNARADVKRKTD
Ga0208989_100517781	3300027738	Forest Soil	MFDPVQAPSLRDAFELVNTAILEADSGLRRQIPDRARDQDFAGTRFRGDARADVKRE
Ga0209693_105982082	3300027855	Soil	MFDPVQAPSLGHAFELVNAAILEANPRLRHQILDRARDQDFAGTRFRGDA
Ga0209169_106470941	3300027879	Soil	MFDPVQAPSLGHALELVTATIREADRGLRHQVLDRARDQDFAGTRLRGDARADVEREPDDIRPAHLVFTGVQP
Ga0209068_105336871	3300027894	Watersheds	MFDPVQAPPLGHAFESVNAAILKADSRLRHQILDRARNQDFAGTRFRGDARA
Ga0209624_102606271	3300027895	Forest Soil	MTSMFDPVQAPPLRHAFELVNAAIREADFRLRHQILDRARDQDFAGTRFRGDARP
Ga0209067_106340261	3300027898	Watersheds	MFDPVQAPPLGHAFESVNAAILKADSRLRHQILDRARNQDFAGTRLRGDARADVKRETDHVGPT
Ga0209006_100296428	3300027908	Forest Soil	MFDPVQAPSFRHAFELVKAAILEADFRLRHQIPDRARDQDFAGTRFRGDARADVKRE
Ga0209526_108174012	3300028047	Forest Soil	MFDPVQAPSPRHAPELVNAAILEADSRLRHQILDRARDQDFAGTRFRGDARADVKRETEH
Ga0307504_104234211	3300028792	Soil	MIDPVQAPPPRHAFELVNAAILEADSRLRHQILDRARDQDFAGTRFRGDARADVKRETEHVSPAHF
Ga0302310_105915511	3300030737	Palsa	MFDPVQAPSFRHASELVNATILEADSRLRHQIPDRARDQDFAGTRFRGDARADVKRQTEHLRPAHSVFARVQPHPDL
Ga0170822_140146311	3300031122	Forest Soil	MFDPVQAPSLRHAFELVKAAIPEANSGLRHHILDRARDQDLAGTRFRGDARADVKRETDHLRPAHLVFARMQPHP
Ga0170824_1064970451	3300031231	Forest Soil	MFDPVQAPPLGHAFESVNAAILKADSRLRHQILDRARNQDFAGTRFRGDARADVKRETDHVSP
Ga0170824_1067965501	3300031231	Forest Soil	MFDPVQAPSLRHAPELVNAVILEADSRLRHQILDRARDQDFAGTRFRGDARADVKRKTEHLSPAHFVF
Ga0170824_1084483192	3300031231	Forest Soil	MFDPVQAPSLRHAPELVNAAILEADSRLRHQILYRARDQDFAGTRFRGDARADVKRKTEHLSPAHFVFA
Ga0170820_160142011	3300031446	Forest Soil	MFDPVQAPPLGHAFESVNAAILKADSRLRHQILDRARNQDFAGARFRGDARADVKRKTDHVSPARF
Ga0170819_113288011	3300031469	Forest Soil	MFDPVQAPSLRDTPELMNAAILEADSRLRHQILDRARDKDFAGTRFSGDARADVKRETEHLRSAHLVFARVQPNPNLE
Ga0170818_1075093211	3300031474	Forest Soil	MIDPVQAPPLRHAFELVNASILEANSRLRHQILDRARDQDFAGTRFRGDARPDVKRE
Ga0170818_1101725702	3300031474	Forest Soil	MFDPVQAPSLRHAFELVNAAILEADSRLRHQILDRARNQDFAGTRFRGDARA
Ga0310686_1010752113	3300031708	Soil	MFDPVQAPSLRHAFELVNAAILEADSRLRHQILDRARDQDFAGTRFRGDARADVKRETEH
Ga0307474_107115231	3300031718	Hardwood Forest Soil	MFDPVQAPSLRHAFELVNAAILEADSRLRHQILDRARDQDFAGTRFRGDARADVK
Ga0306918_105436722	3300031744	Soil	MFDPVQAPSLRQAFELVNAAILEADSRLRHQILDRARDKDFAGTRFSGDARADVKR
Ga0318492_107616931	3300031748	Soil	MLDPVQAPSHRHAPELVNATIAEADSGLRHQIPDCARDQDFAGTCFRGDARADVKRETDHLRPAH
Ga0307477_103335782	3300031753	Hardwood Forest Soil	MFDPVQAPSLRHAPELVNAAILEADSRLRHQILDRARDQDFAGTRFRGDARADVKRETEHLSPA
Ga0307475_105850561	3300031754	Hardwood Forest Soil	MFDLVQAPSLRHAPELVNAAIPEADSRLRHQILDRARDQDLAGTRFRGDARADVKRQTEHLGPARFVFARV
Ga0318554_108270461	3300031765	Soil	MIDPVQAPPLRHTFELVNASILEADSRLRHQILDRTRDQDFAGTRFRGDARPDVKRETKHFSPAHFVF
Ga0318509_106439961	3300031768	Soil	MIDPVQAPPLRHAFELVNASIPEANSRLRHQILDRARDQDFAGTRFRGDARPDVKRETKHFSPAH
Ga0318548_105573061	3300031793	Soil	MLDPVQAPPFRHAFESMNAAVNKADSRLRHQVLDRARYQDFAGTRFGGDARANVKRETDDVSPAHLVLA
Ga0307473_107347051	3300031820	Hardwood Forest Soil	MIDPVQAPPLRHAFELVNASILEANSRLRHQILDRARDQDFAGTRFRGD
Ga0310916_113769122	3300031942	Soil	MIDPVQAPPLRHAFELVNASILEANSRLRHQILDRTRHQDFAGTRFRGDTCPDVKRET
Ga0310913_104969221	3300031945	Soil	MIDPVQAPPLRHAFELVNASIPEANSRLRHQILDRARDQDFAGTRFRGDARPDVK
Ga0306926_120238521	3300031954	Soil	MFDPVQAPSFRHAFKSVNAAILEADSRLRHQLLDRARDQDFAGTRFRGDARADVKRETEHLRPAHLVFA
Ga0306922_119080902	3300032001	Soil	MIDPVQAPPLRHTFELVNASILEADSRLRHQILDRTRDQDFAGTRFRGDARPDVKRETK
Ga0318558_102802192	3300032044	Soil	MFDPVQVPSLRHAFELVNAAILEADSGLRHQILDRARDQDFARTRFRGDARADVKRETEHLCTAH
Ga0318524_103019761	3300032067	Soil	MFDPVQVPSLRHAFELVNAAILEADSGLRHQILDRARDQDFARTRFRGDARADVKRETEHLC
Ga0318540_106482771	3300032094	Soil	MFDPVQAPSLRQAFELVNAAILEADSRLRHQILDRTRDKDFAGARFSGDA
Ga0307470_118745671	3300032174	Hardwood Forest Soil	MFDPVQAPSLRHAPELVNAAILEADSRLRHQILDRARDQDFAGTRFRGDARADVKRETEH
Ga0307472_1008306513	3300032205	Hardwood Forest Soil	MIDPVQAPPLRHTFELVNASILEADSRLRHQILDRARDQDFAGTRLRGDARPDVKRETKH
Ga0306920_1037314131	3300032261	Soil	MSTFAGHLLLFDPVQAPPLGHALESVNAAIVKADSRLRHQILDRARNQDFAGTRLRGDARADVKRETDHVSPIH
Ga0335076_106537602	3300032955	Soil	VLDPVQMPSLWHAPELVNAAIAETDSRLRHQIPDGARDQDFAGTRFRGDARADVKRESD
Ga0310914_118948491	3300033289	Soil	MFDPVQAPSLRHAFELVKAAILEANSRLRHQILDRTRDQDFAGTRFR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086753

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences